BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G58640.1
Length=3268
Score E
Sequences producing significant alignments: (Bits) Value
Ahg938858 jgi|Araly1|938858|scaffold_503049.1 4150 0.0
Ahg935149 jgi|Araly1|935149|scaffold_403137.1 592 7e-168
Ahg482025 jgi|Araly1|482025|fgenesh2_kg.4__1085__AT2G31010.1 579 6e-164
> Ahg938858 jgi|Araly1|938858|scaffold_503049.1
Length=2471
Score = 4150 bits (2247), Expect = 0.0
Identities = 2403/2478 (97%), Gaps = 11/2478 (0%)
Strand=Plus/Plus
Query 408 TAGACATTAAGGAAATTGGCAATGGGAGAGACGGGAGATGATGCTGGGCCATCAGAGCAA 467
||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TAGACATCAAGGAAGTTGGCAATGGGAGAGACGGGAGATGATGCTGGGCCATCAGAGCAA 60
Query 468 GGACCTTCTAATCAAACCTGGTGGCCTTCAGAATTTGTGGAGAAATTTGGTTCTGTTTAT 527
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 61 GGACCTTCTAATCAAACCTGGTGGCCTTCAGAATTTGTGGAGAGATTTGGTTCTGTTTAT 120
Query 528 CTGGGATCGCAAGAAGAGA-CATCTAGTACTAAAGACTCACCTAGAAATCTTGGGCAAGA 586
||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||
Sbjct 121 CTGGGATCGCAAGAAGAGATC-TCTAGTACTAAAGACTCACCCAGAAATCTTGGGCAAGA 179
Query 587 TGGGCTGCCATCTAGTACTGCTTCGAATATTCTTTGGAGTACTGGTTCACTTTCTGAGCC 646
|||||||||||||| |||||| || |||||||| ||||||||||||||||||||||||||
Sbjct 180 TGGGCTGCCATCTACTACTGCCTCTAATATTCTCTGGAGTACTGGTTCACTTTCTGAGCC 239
Query 647 CATCCCAAATGGCTTCTACTCTGTGATCCCGGATAATAGATTGAAGCAGCTATTTAATAA 706
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 240 CATCCCAAATGGCTTCTACTCTGTGATCCCGGATAATAGATTGAAGCAACTATTTAATAG 299
Query 707 CATTCCTACATTGGAAGATCTTCATGCTCTGGGTGACGAAGGTCTTAAGGCTGATGTGAT 766
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 300 CATTCCTACATTGGAAGATCTTCATGCTCTGGGTGAGGAAGGTCTTAAGGCTGATGTGAT 359
Query 767 TCTAGTTGATTTTCAGAAAGATAAAAAGCTTTTCAGGCAGAAGCAGTTGATTACCAAACT 826
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 360 TCTAGTTGATTTTCAGAAAGATAAGAAGCTTTTCAGGCAAAAGCAGTTGATTACCAAACT 419
Query 827 TGTCAGTGGATTGAACTCAAAGCCAGCTACTATTATTAAGAAAATTGCTGGACTGGTAGC 886
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 420 TGTCAGTGGATTGAACTCAAAGCCACCTACTATTATTAAGAAAATTGCTGGACTGGTAGC 479
Query 887 AGATGTTTATAAGCAATCAACTCTGCAGAGTCCAGCAAAAAGTACGCAGTCATTTGAAAA 946
||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||
Sbjct 480 AGATGTTTATAAGCAATCAACTCTGCAGAGTCCGGCAAAAACTACGCAATCATTTGAAAA 539
Query 947 CTGTGGTATTCAACTGCTAGGACAGATCAAGCATGGTTCTTGTCGTCCTCGAGCAATCTT 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 CTGTGGTATTCAACTGCTAGGACAGATCAAGCATGGTTCTTGTCGTCCTCGAGCAATCTT 599
Query 1007 GTTCAAAGTCTTAGCTGATACTGTTGGCCTGCAAAGTCGACTTGTAGTGGGTTTGCCAAG 1066
||||||||| ||||| ||||| ||||| || |||||| | ||||||||||||||||||||
Sbjct 600 GTTCAAAGTTTTAGCGGATACCGTTGGTCTTCAAAGTAGGCTTGTAGTGGGTTTGCCAAG 659
Query 1067 TGATGGAGCTGCTGAGAGTGTGGACTCATATAGTCATATTTCTGTCACTGTTTTGCTGAA 1126
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 660 TGATGGAGCTGCTGAGAGTGTGGACTCATATAGTCATATTTCTGTCACTGTTCTGCTGAA 719
Query 1127 TTCTGTGGAAATGCTGGTTGACCTAATGCGATTTCCTGGTCAGCTTATTCCTCTATCAAC 1186
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 720 TTCTGTGGAAATGCTGGTTGATCTAATGCGATTTCCTGGCCAGCTTATTCCTCTATCAAC 779
Query 1187 CAAAGCAATTTTTATGAGTCATATCTCAGCGGCAGGGGAAAGTGATTCTGCAGAGAATGA 1246
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 CAAGGCAATTTTTATGAGTCATATCTCAGCGGCAGGGGAAAGTGATTCTGCAGAGAATGA 839
Query 1247 CTCTTGTGATTCACCTTTGGAGCCAAACAGTCCCATGTTTGGTTATCCAGAGA-AATTTG 1305
||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |
Sbjct 840 CTCTTGTGATTCACCTTTGGAGCCAAACAGTCCCATGTTTGGTTATCCAGAGAGAAAT-G 898
Query 1306 AC-CATGAAAATGCAGAAAAAGATGAAAACCTTTCGTTGCACAGGAAACTGGATGGGTCT 1364
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 ACGC-TGAAAATGCAGAAAAAGATGAAAACCTTTCGTTGCACAGGAAACTGGATGGGTCT 957
Query 1365 CCAAATACGTCTGGTCCACCATCAAGGAATATGCTGTTACGATCTGCCTCTGCGCTAGAG 1424
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 958 CCAAATACGTCTGGTCCACCATCAAGGAATGTGCTGTTACGATCTGCCTCTGCGCTAGAG 1017
Query 1425 AGGAAATTAAGTTTCTCACAGAGCGAGTCAAACATGGCTAACGAGTTTTGGCGGCAGAGC 1484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 AGGAAATTAAGTTTCTCACAGAGCGAGTCAAACATGGCTAACGAGTTTTGGCGGCAGAGC 1077
Query 1485 CGGAGGAAGGTCATTGCTGATCAGCGGACTGCTAGTTCCAGTCCCGAACATCTTTCCTTC 1544
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1078 CGGAGAAAGGTCATTGCTGATCAGCGGACTGCTAGTTCCAGTCCCGAACATCTTTCCTTC 1137
Query 1545 CGAGCCCGTACAAAGTCCATGCTAAGTGGCGACAAGAACTTGGCACGAGATTTCACCGGG 1604
||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1138 CGAGCACGTACAAGGTCCATGCTAAGTGGCGACAAGAACTTGGCACGAGATTTCACCGGT 1197
Query 1605 GATGTTGCCACATCAAGCTGCAAATCTGTTGGAGGAGCAAAAATGGAAACTAAGAGAATA 1664
|||||||||| |||||||||||||||||| |||||||| ||| |||||||||||||||||
Sbjct 1198 GATGTTGCCATATCAAGCTGCAAATCTGTCGGAGGAGCGAAATTGGAAACTAAGAGAATA 1257
Query 1665 AGGAGGAGAAGCATCAGTATAACTCCTGAGATTGGCGATGATATTGTCAGGGCAGTACGA 1724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1258 AGGAGGAGAAGCATCAGTATAACTCCTGAGATTGGCGATGATATTGTCAGGGCAGTAAGA 1317
Query 1725 GCGATGAATGAAGCCTTGAAGCAGAATCGCCTCTCAAAAGAGCAAGGGGATGATGATTCA 1784
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1318 GCGATGAATGAAGCCTTGAAGCAGAATCGCCTCTCAAAAGAGCAAGGGGATGATGGTTCA 1377
Query 1785 TCTCCTAACTCTCCAAATGACAGAACCGAGAGCTCTCATCTCCAGAAAAATGTCTCTGGT 1844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1378 TCTCCTAACTCTCCAAATGACAGAACCGAGAGCTCTCATCTCCAGAAAAATGTCTCTGGT 1437
Query 1845 TTTCATCTTGATGCCCATGACCAAGTTTCTGGTGGAAGGTCGACACTTTCAAGGGAACCA 1904
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1438 TTTCATCTTGATGCTCATGACCAAGTTTCTGGTGGAAGGTCGACACTTTCAAGGGAACCA 1497
Query 1905 CTAGATCCGCAGAAGGCAATCTCACTACCTTCTTCTCCCCAGAACTACCGAAGCCAATAT 1964
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1498 CTAGATCCGCAGAAGGCAATCTCACTACCGTCTTCTCCCCAGAACTACCGAAGCCAATAT 1557
Query 1965 GAACAGAGTGGATCGTCACATCGCAATATAAGCCACATCTGGGATAAAGTAT-TGGGATC 2023
||||||||||||||||||||||| ||||||||||| |||||||||||||| | |||||||
Sbjct 1558 GAACAGAGTGGATCGTCACATCGTAATATAAGCCATATCTGGGATAAAGT-TCTGGGATC 1616
Query 2024 TCCCATGTTCCAGAATAAGCCATTATTACCTTATGAAGAATGGAACATAGACTTCTCTGA 2083
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1617 TCCCATGTTCCAGAATAAGCCATTATTACCATATGAAGAATGGAACATAGACTTCTCTGA 1676
Query 2084 GCTGACTGTTGGGACACGTGTCGGAATTGGATTTTTCGGAGAAGTATTCCGTGGGATCTG 2143
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1677 GTTGACTGTTGGGACACGTGTCGGAATTGGATTTTTCGGAGAAGTATTCCGTGGGATCTG 1736
Query 2144 GAACGGGACAGACGTTGCTATCAAAGTGTTCCTTGAGCAAGACCTTACAGCTGAGAACAT 2203
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1737 GAACGGGACAGACGTTGCGATCAAAGTGTTCCTTGAGCAAGACCTTACAGCTGAGAACAT 1796
Query 2204 GGAGGATTTCTGCAATGAGATATCAATTCTTAGCCGACTTAGACATCCCAATGTTATACT 2263
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1797 GGAGGACTTCTGCAATGAGATATCAATTCTTAGCCGACTTAGACATCCCAATGTTATACT 1856
Query 2264 GTTCCTTGGAGCATGCACAAAGCCTCCACGATTATCACTGATCACTGAGTACATGGAAAT 2323
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1857 GTTCCTTGGAGCATGCACAAAGCCTCCACGATTATCATTGATCACTGAGTACATGGAAAT 1916
Query 2324 GGGATCTTTGTATTACTTGCTCCACTTGAGTGGACaaaaaaaGAGGTTAAGCTGGCGGAG 2383
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1917 GGGATCTTTGTATTATTTGCTCCACATGAGTGGACAAAAAAAGAGGTTAAGCTGGCGGAG 1976
Query 2384 GAAGCTAAAGATGCTGCGGGACATTTGCAGGGGATTGATGTGTATACACCGGATGGGGAT 2443
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||
Sbjct 1977 GAAGCTAAAGATGCTGCGTGACATTTGCAGGGGCTTGATGTGCATACACCGGATGGGGAT 2036
Query 2444 AGTACACCGTGATATAAAGAGTGCAAACTGTCTTTTGAGCAACAAATGGACAGTCAAGAT 2503
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2037 AGTACACCGTGATATAAAGAGCGCAAACTGTCTTTTGAGCAACAAATGGACAGTCAAGAT 2096
Query 2504 CTGTGATTTTGGGCTGTCGAGAATAATGACAGGGACAACAATGAGAGACACAGTCTCTGC 2563
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 2097 CTGTGATTTTGGGCTCTCGAGAATAATGACAGGCACAACAATGAGAGACACAGTCTCAGC 2156
Query 2564 AGGAACTCCAGAGTGGATGGCTCCTGAACTTATCCGCAATGAGCCCTTCTCAGAAAAGTG 2623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2157 AGGAACTCCAGAGTGGATGGCTCCTGAACTTATCCGCAATGAGCCCTTCTCAGAAAAGTG 2216
Query 2624 TGATATCTTCAGTTTAGGTGTAATAATGTGGGAGCTATGCACTTTAACCAGACCTTGGGA 2683
|||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 2217 TGATATCTTCAGCTTAGGTGTAATAATGTGGGAACTCTGCACTTTAACCAGACCTTGGGA 2276
Query 2684 AGGAGTACCGCCTGAACGGGTTGTTTATGCTATTGCTTACGAGGGAGCTCGGCTTGAGAT 2743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2277 AGGAGTACCGCCTGAACGGGTTGTTTATGCTATTGCTTACGAGGGAGCTCGGCTTGAGAT 2336
Query 2744 TCCTGAAGGACCACTGGGAAAGCTTATTGCAGATTGTTGGACAGAACCGGAACAAAGACC 2803
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2337 TCCTGAAGGACCGCTGGGAAAGCTTATTGCAGATTGTTGGACAGAACCGGAACAAAGACC 2396
Query 2804 GAGTTGCAATGAGATACTCTCTCGTTTGCTGGATTGTGAGTATTCGCTTTGCTAACTTTC 2863
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 2397 GAGTTGCAATGAGATACTCTCTCGTTTGCTGGATTGCGAGTATTCGCTTTGCTAACTT-C 2455
Query 2864 TCTCAATCATATTTTCCT 2881
| |||||||| ||| |||
Sbjct 2456 TGTCAATCAT-TTT-CCT 2471
> Ahg935149 jgi|Araly1|935149|scaffold_403137.1
Length=2266
Score = 592 bits (320), Expect = 7e-168
Identities = 740/938 (79%), Gaps = 48/938 (5%)
Strand=Plus/Plus
Query 1903 CACTAGATCCGCAGAAGGCAATCTCACTACCTTCTTCTCCCCAGAA-CTACCGAAGCCAA 1961
||||| ||| |||||||||||| ||| | || || ||||||| ||| ||| | || ||||
Sbjct 1297 CACTAAATCGGCAGAAGGCAATATCATTTCCATCATCTCCCC-GAAGCTATCAAATCCAA 1355
Query 1962 T-A--TGAACA-GAGTGGATCGTCACATCGCAATATAAGCCACATCTGGGATAAAGTATT 2017
| | |||| | ||||| | | |||| | || |||||||| || ||| || |||| |
Sbjct 1356 TCATCTGAA-AGGAGTGAACCTTCACGTAAAAAAATAAGCCAAATTTGGAATGAAGTGCT 1414
Query 2018 GGGATCTCCCATGTTCCAGAATAAGCCATTATTACCTTATGAAGAATGGAACATAGACTT 2077
|| |||||| |||||||||||||| || || ||||| |||||| ||||||||||| | ||
Sbjct 1415 GGAATCTCCAATGTTCCAGAATAATCCTTTGTTACCATATGAACAATGGAACATAAATTT 1474
Query 2078 CTCTGAGCTGACTGTTGGGACACGTGTCGGAATTGGATTTTTC-GGAGAAGTAT-TCCGT 2135
||| || |||| |||||| | ||| || | |||| | ||| |||| ||||| | |||
Sbjct 1475 CTCCGATTTGACAGTTGGGGCTTTTGTTGGGAGTGGA-TCTTCTGGAGTAGTATGT-CGT 1532
Query 2136 GGGATCTGGAACGGGACAGACGTTGCTATCAAAG-TG-TTCCTT-GAGCAAGACCTTACA 2192
|| |||||||| ||||| ||||| ||| ||| || || || || ||| | ||||||
Sbjct 1533 GGCATCTGGAATAAAACAGAAGTTGCGATC-AAGATGCTT-TTTGGA-CAACAGCTTACA 1589
Query 2193 GCTGAGAACATGGAGGATTTCTGCAATGAGATATCAATTCTTAGCCGACTTAGACATCCC 2252
|||||||||||| | |||||||||||||||||||| ||||||||||| ||| ||||||||
Sbjct 1590 GCTGAGAACATGAAAGATTTCTGCAATGAGATATCTATTCTTAGCCGTCTTCGACATCCC 1649
Query 2253 AATGTTATACTGTTCCTTGGAGCATGCACAAAGCCTCCAC-GATTATCACTGATCACTGA 2311
|||||||| ||||||||||||||||||||||||||||| | | |||||| ||||||| ||
Sbjct 1650 AATGTTATTCTGTTCCTTGGAGCATGCACAAAGCCTCCTCAG-TTATCAATGATCACAGA 1708
Query 2312 GTACATGGAA-ATGGGATCTTTGTATTACT-TGCTCCACTTGAGTGGACaaaaaaaGAGG 2369
||| ||| || | ||| || |||||| | | | |||| | | || ||||| | ||
Sbjct 1709 GTATATG-AATAGGGGGTCCTTGTATGA-TATCCTCCG-T--ACCAGA-AAAAAG-G-GG 1760
Query 2370 TTAAGCTGGCGGA-GGAAGCTAAAGATGCTGCGGGACATTTGCAGGGGATTGATGTGTAT 2428
||||||||| | | |||| |||||||| || | ||||||||||| || |||||| | ||
Sbjct 1761 TTAAGCTGG-GAAAGGAAACTAAAGATTCTAAGTGACATTTGCAGAGGTTTGATGGGCAT 1819
Query 2429 ACACCGGATGGGGATAGTACACCGTGATATAAAGAGTGCAAACTGTCTTTTGAGCAACAA 2488
|||| |||||||||||| ||||||||| |||||||||||||||| || || | |||||
Sbjct 1820 TCACCAGATGGGGATAGTCCACCGTGATCTAAAGAGTGCAAACTGCCTGTT-A--AACAA 1876
Query 2489 ATGGACAGTCAAGATCTGTGATTTTGGGCTGTCGAGAATAATGACAGGG-ACAACAATGA 2547
||| |||||||||||||||||||||||| |||||||| |||| | || || ||| ||
Sbjct 1877 GGGGATAGTCAAGATCTGTGATTTTGGGCTCTCGAGAATGATGA-ATGGCACGACAGTG- 1934
Query 2548 GA-GACACAGTCTCTGCAGGAACTCCAGAGTGGATGGCTCCTGAACTTATCCGCAATGAG 2606
|| || || | ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1935 GAAGATACTGAAGCTGCAGGAACTCCCGAGTGGATGGCTCCTGAACTTATCCGCAATGAA 1994
Query 2607 CCCTTCTCAGAAAAGTGTGATATCTTCAG-TTTAGGTGTAATAATGTGGGAGCTATGCAC 2665
|| || ||||||| ||||| ||||| || ||| ||||| |||||||||||||| |||||
Sbjct 1995 CCAGTCACAGAAAAATGTGACATCTTTAGCTTT-GGTGTTATAATGTGGGAGCTTTGCAC 2053
Query 2666 TTTAACCA-GACCTTGGGAAGGAGTACCGCCTGAACGGGTTGTT--TATGCTATTGCTTA 2722
| || ||| | ||| || ||||||| || ||| || || ||| | |||| |
Sbjct 2054 TCTATCCAAGCCCT-GGAAAGGAGTCCCAAAAGAAAAAGTCATTCATAT-CG-TTGCAAA 2110
Query 2723 CGAGGGAGCTCGGCTTGAGATT-CCTGAAGGACCACTGGGAAAGCTTATTGCAGATTGTT 2781
|| ||||| ||||| | ||| || ||||||||||| | ||||||||||||||||||
Sbjct 2111 TGAAGGAGCCCGGCTC-ACATTACCCGAAGGACCACTACGCCAGCTTATTGCAGATTGTT 2169
Query 2782 GGACAGAACCGGAACAAAGACCGAGTTGCAATGAGATA 2819
|| | ||||| || ||||| ||||| || || ||||||
Sbjct 2170 GGTCGGAACCAGAGCAAAGGCCGAGCTGTAAAGAGATA 2207
> Ahg482025 jgi|Araly1|482025|fgenesh2_kg.4__1085__AT2G31010.1
Length=2721
Score = 579 bits (313), Expect = 6e-164
Identities = 697/878 (79%), Gaps = 44/878 (5%)
Strand=Plus/Plus
Query 2004 TGGGATAAAGT-ATTGGGATCTCCCATGTTCCAGAATAAGCCATTATTACCTTATGAAGA 2062
||| ||||||| ||| | ||| ||| || |||||| |||| |||||||| ||| ||||
Sbjct 1571 TGGAATAAAGTGGTTGAG-TCTTCCACATTGCAGAATCAGCCTTTATTACCCTATCAAGA 1629
Query 2063 ATGGAACATAGACTTCTCTGAGCTGACTGTTGGGACACGTGTCGGAATTGGATTTTTCGG 2122
|||| |||| |||||||| |||||||||||||| || || || || ||||| ||||| ||
Sbjct 1630 ATGGGACATTGACTTCTCAGAGCTGACTGTTGGAACTCGGGTGGGGATTGGGTTTTTTGG 1689
Query 2123 AGAAGTATTCCGTGGGA-TCTGGAACGGGACAGACGTTGCTATCAAAGTGTTCCTTGAGC 2181
||||| || ||| ||| | ||||| |||||||| ||||| |||||| |||| || ||||
Sbjct 1690 TGAAGTTTTTCGT-GGAGTATGGAATGGGACAGATGTTGCAATCAAATTGTTTCTGGAGC 1748
Query 2182 AAGACCTTACAGCTGAGAACATGGAGGATTTCTGCAATGAGATATCAATTCTTAGCCGAC 2241
|||| ||||| || || |||||||| |||||||||||||||||||||||||| |||||
Sbjct 1749 AAGATCTTACTGCCGAAAACATGGAAGATTTCTGCAATGAGATATCAATTCTCAGCCGTG 1808
Query 2242 TTAGACATCCC-AATGTTATACTGTTCCTTGGAGCATGCACAAAGCCTCCACGATTATC- 2299
|| | || ||| |||||| || | |||||||| ||||||||||| |||||||| |||||
Sbjct 1809 TTCGCCA-CCCAAATGTTGTATTATTCCTTGGTGCATGCACAAAACCTCCACGCTTATCT 1867
Query 2300 ACTGATCACTGAGTACATGGAAATGGGATCTTTGTATTACTTGCTCCACTTGAGTGGACa 2359
| ||||||| || |||||||| |||||||||||||||| ||| ||||| ||||||| ||
Sbjct 1868 A-TGATCACGGAATACATGGAGCTGGGATCTTTGTATTATTTGATCCACATGAGTGGTCA 1926
Query 2360 aaaaaaG-AGGTTAAGCTGGCGGAGGAA-GCTAAAGATGCTGCGGGACATTTGCAGGGGA 2417
|| ||| | || ||||||| | ||| ||| | |||||| | ||||| ||||||||
Sbjct 1927 GAAGAAGAAACTT-AGCTGGCACA-GAAGGCTCAGGATGCTTAGAGACATCTGCAGGGGT 1984
Query 2418 TTGATGTGTATACACCGGATGGGGATAGTACACCGTGATATAAAGAGTGCAAACTGTCT- 2476
|||||||| |||||||||||| |||||| |||||||| |||| ||||| ||||||||
Sbjct 1985 TTGATGTGCATACACCGGATGAAGATAGTCCACCGTGACCTAAAAAGTGCCAACTGTCTA 2044
Query 2477 TTTGAGC-AACAAATGGACAGTCAAGATCTGTGATTTTGGGCTGTCGAGAATAATGACAG 2535
| || | ||| | ||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct 2045 GTGGA-CAAAC-ATTGGACAGTCAAGATCTGTGATTTTGGGCTCTCAAGAATAATGACTG 2102
Query 2536 G-GACAACAATGAGAG-ACACAGTC-TCTGCAGGAACTCCAGAGTGGATGGCTCCTGAAC 2592
|| |||| ||| || |||| || ||||| || || ||||||||||||||||| || |
Sbjct 2103 ACGAAAACA-TGA-AGGACACT-TCATCTGCTGGTACACCAGAGTGGATGGCTCCAGAGC 2159
Query 2593 TTATCCGCAATGAGCCCTTCT-CAGAAAAGTGTGATATCTTCAGT-TTAGGTGTAATAAT 2650
| || ||||| |||| || | |||| |||||||||||||| ||| || || || |||||
Sbjct 2160 TCATTCGCAACAAGCCTTT-TACAGAGAAGTGTGATATCTTTAGTCTTGGG-GTCATAAT 2217
Query 2651 GTGGGAGCTATGCA-CTTTAACC-AGACCTTGGGAAGGAGTACCGCCTGA-ACGGGTTGT 2707
|||||| || | || ||||| | | ||| ||||||||||| || ||||| | || ||||
Sbjct 2218 GTGGGAACTTT-CAACTTTA-CGTAAACCATGGGAAGGAGTTCCACCTGAGAAGG-TTGT 2274
Query 2708 -TTATGCTATTGCTTACGA-GGGAGCTCGGCTTG-AGATTCCTGAAGGACCACTGGG-AA 2763
|| |||| |||| | || ||| | || ||| |||||||||| || ||||| | ||
Sbjct 2275 CTT-TGCTGTTGCGCATGAAGGGT-CACGT-TTGGAGATTCCTGATGGTCCACTCAGCAA 2331
Query 2764 AGCTTATTGCAGATTGTTGGACAGAACCGGAACAAAGACCGAGTTGC-AATGAGATACTC 2822
| || ||||||||||||||| |||| || ||| || | || | ||| || ||||||||
Sbjct 2332 A-CTAATTGCAGATTGTTGGGCAGAGCCTGAAGAACGCCCAAATTGTGAA-GAGATACT- 2388
Query 2823 TCTCGT-TTGCTGGATTGTGAGTATTCGCTTTGCTAAC 2859
| | ||||| ||||||||||| | || |||||||
Sbjct 2389 TAGAGGCTTGCTCGATTGTGAGTACACACTGTGCTAAC 2426
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 123344594093
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5