BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G59830.1
Length=1694
Score E
Sequences producing significant alignments: (Bits) Value
Ahg939013 jgi|Araly1|939013|scaffold_503204.1 2433 0.0
Ahg935301 jgi|Araly1|935301|scaffold_403289.1 1164 0.0
Ahg482101 jgi|Araly1|482101|fgenesh2_kg.4__1161__AT2G31800.1 516 2e-145
> Ahg939013 jgi|Araly1|939013|scaffold_503204.1
Length=1476
Score = 2433 bits (1317), Expect = 0.0
Identities = 1422/1474 (96%), Gaps = 1/1474 (0%)
Strand=Plus/Plus
Query 39 TTCATTATC-ATCATCAATCATGGACAACATTGCCGCGCAGTTGAAGCGTGGGATATCGA 97
||||||||| ||||||||||||||| ||| |||| |||||||||||||||||||||||||
Sbjct 3 TTCATTATCTATCATCAATCATGGAGAACGTTGCTGCGCAGTTGAAGCGTGGGATATCGA 62
Query 98 GACAATTCTCGACAGGATCAATGAGACGAACATTAAGCCGACAATTCACGCGCCAAAATT 157
||||||||||||||||||| ||| |||||||||||||| |||||||||| ||||||||||
Sbjct 63 GACAATTCTCGACAGGATCGATGCGACGAACATTAAGCAGACAATTCACACGCCAAAATT 122
Query 158 CTCTCGATCCACGGCGTAACAACATGAGATTCAGCTTCGGTCGTCAATCTTCGCTTGATC 217
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 123 CTCTTGATCCACGGCGTAACAACATGAGATTCAGCTTCGGCCGTCAATCTTCGCTTGATC 182
Query 218 CGATCAGACGTAGTCCTGAGTCTCTTAGCTGCGAGCCGCATATGTCTGTCCCCGAGAATC 277
||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 183 CGATCAGGCGTAGCCCTGAATCTCTTAGCTGCGAGCCGCATATGTCTGTCCCCGAGAATC 242
Query 278 TTGATTCGACGATGCAGCTTCTCTTTATGGCGAGTAAAGGTGATGTTAATGGCGTTGAGG 337
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 243 TTGATTCGACAATGCAGCTTCTCTTTATGGCGAGTAAAGGCGATGTTAATGGCGTTGAGG 302
Query 338 AGCTGCTTAATGAAGGAATAGATGTGAATAGCATTGATCTTGATGGTCGTACTGCTCTTC 397
||||||| || |||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 303 AGCTGCTCAACGAAGGAATCGATGTGAATAGCATTGATCTTGATGGTCGAACTGCTCTTC 362
Query 398 ACATTGCTTCCTGTGAAGGTCATTATGATGTTGTTAAGGTTCTTCTTAGCCGGAGAGCTA 457
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 363 ACATTGCTTCTTGTGAAGGTCATTACGATGTTGTTAAGGTTCTTCTTAGCCGGAGAGCTA 422
Query 458 ATATCGATGCTCGTGATCGTTGGGGTAGTACGGCGGCTGTTGATGCAAAGTATTATGGGA 517
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 423 ACATCGATGCTCGTGACCGTTGGGGTAGTACGGCGGCTGTTGATGCAAAGTATTATGGGA 482
Query 518 ATGTTGAAGTTTATAATCTCTTGAAAGCTCGAGGCGCTAAAGCTCCGAAAACTAGAAAGA 577
|||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct 483 ATGTTGAAGTGTATAGTCTCTTGAAAGCTCGAGGAGCTAAAGCTCCGAAAACTAGAAAGA 542
Query 578 CTCCAATGACGGTAGGGAATCCAAAAGAAGTTCCTGAGTATGAGCTTAATCCACTCGAGC 637
||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 543 CTCCAATGAAGGTAGGGAATCCGAAAGAAGTTCCTGAGTATGAGCTTAATCCACTTGAGC 602
Query 638 TGCAAGTCCGAAAAGTTGATGGCATTTCAAAGGGAACTTATCAAGTTGCTAAATGGAATG 697
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 603 TGCAAGTCCGAAAAGTTGATGGCATTTCAAAGGGGACTTATCAAGTAGCTAAATGGAATG 662
Query 698 GCACGCGAGTCTCAGTAAAAATATTCGATAAAGATAGCTATTCAGATCCTGAACGAGTAA 757
||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||
Sbjct 663 GCACGCGAGTCTCAGTAAAGATATTCGATAAAGATAGTTATTCCGATCCCGAACGAGTAA 722
Query 758 ATGCTTTCACAAACGAATTGACTTTGCTAGCAAAAGCTCGGCATCCAAATATTGTTCAAT 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 723 ATGCTTTCACAAACGAATTGACTTTGCTAGCAAAAGCTCGGCATCCAAATATTGTTCAAT 782
Query 818 TTGTTGGAGCCGTCACTCAAAATCTACCGATGATGATTGTAGTTGAGTGTAATCCAAAAG 877
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 783 TTGTTGGAGCCGTCACTCAAAATCTACCGATGATGATTGTAGTAGAGTGTAATCCTAAAG 842
Query 878 GTGATCTAAGTGTCTATCTTCAAAAGAAAGGTCGTCTTTCTCCTTCAAAAGCTCTGAGAT 937
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 843 GTGATCTAAGTGTCTATCTTCAAAAGAAAGGTCGCCTTTCTCCTTCAAAAGCTCTGAGAT 902
Query 938 TTGCTCTTGATATTGCTAGAGGAATGAACTACCTCCATGAATGTAAACCAGATCCGATCA 997
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 903 TTGCTCTTGATATTGCTAGAGGCATGAACTACCTCCATGAATGTAAACCAGATCCGATCA 962
Query 998 TCCACTGCGAGTTAATGCCAAAAAATATTTTGCTAGATAGAGGAGGGCAATTGAAGATCT 1057
||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct 963 TCCACTGCGAGTTAAAGCCAAAAAATATTTTGCTAGATAGAGGAGGACAATTGAAGATCT 1022
Query 1058 CTGGTTTTGGTTTGATAAAGTTGTCAAAGATTGGAGAAGACAGTGCAAAAGTAGTGAACC 1117
|||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct 1023 CTGGATTTGGTTTGATAAAGTTGTCAAAGATTGGAGAAGACAATGCAAAAATAGTGAACC 1082
Query 1118 ACGAAGCTCAAATCGATAAGTCAAATTACTATATAGCACCCGAAATTTACAAAGATGAAG 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1083 ACGAAGCTCAAATCGATAAGTCAAATTACTATATAGCACCCGAAATTTACAAAGATGAAG 1142
Query 1178 TCTTCGATAAAAGGGCTGATGTGCATTCGTTTGGTGTCATTTTGTACGAGTTGACCGAGG 1237
||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1143 TCTTCGATAAAAGGGTTGATGTGCATTCGTTTGGTGTCATTTTGTATGAGTTGACCGAGG 1202
Query 1238 GAGTATCTTTATTCCATCCTAAACCACCTGAAGAGGTTGCAGAATCGATTTGTATAGAAG 1297
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 1203 GAGTATCTTTATTCCATCCTAAACCACCTGAAGAGGTTGCAGAATCTATGTGTATAGAAG 1262
Query 1298 GTAAAAGACCAACAATCAGAACAAAGTCAAAGAGTTACCCTCCGGAATTGAAAGAGTTGA 1357
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1263 GTAAAAGACCAACAATCAGAACAAAATCAAAGAGTTACCCTCCGGAATTGAAAGAGTTGA 1322
Query 1358 TTGAGGAATGCTGGCATCCAGAAATCAGTGTGAGGCCAATATTCTCTGAGATTATTATTC 1417
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1323 TTGAGGAATGTTGGCATCCAGAAATCAGTATGAGGCCAATATTCTCTGAGATTATTATTC 1382
Query 1418 GGCTCGACAAGATAGTTACAAACTGTTCCAAGCAGGGTTGGTGGAAAGACACATTTAAGT 1477
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1383 GGCTCGACAAGATAGTTGCAAACTGTTCCAAGCAGGGTTGGTGGAAAGACACATTTAAGT 1442
Query 1478 TCCCTTGGAAATGAAATGGAAATATTGAATCAAT 1511
||||||||||||||||||||||||||||||||||
Sbjct 1443 TCCCTTGGAAATGAAATGGAAATATTGAATCAAT 1476
> Ahg935301 jgi|Araly1|935301|scaffold_403289.1
Length=1480
Score = 1164 bits (630), Expect = 0.0
Identities = 1204/1476 (82%), Gaps = 60/1476 (4%)
Strand=Plus/Plus
Query 55 ATC-ATGGACAACATTGCCGCGCAGTTGAAGCGTGGGATATCGAGACAATTCTCGACAGG 113
||| ||||| ||||| |||||||| | || || ||||| || ||||||||||| || ||
Sbjct 17 ATCAATGGAGAACATAACCGCGCAGCTAAAACGAGGGATCTCAAGACAATTCTCAACTGG 76
Query 114 ATCAATGAGACGAACATTAAGCCGACAATTCACGCGCCA-AAATTCTCTCGATCCACGGC 172
|| || | |||||||| |||||||| |||||||| || | ||||| || || || |
Sbjct 77 TTCGATTCGTCGAACATTGAGCCGACAGTTCACGCGTCAGTCA-TCTCTTGACCCTCGTC 135
Query 173 GTAACAACATGAGATTCAGCTTCGGTCGTCAATCTTCGCTT-GATCCGAT-CAGACGTAG 230
| | ||||||||| || || || |||||||| ||||| || |||||||| | || | ||
Sbjct 136 GGACCAACATGAGGTTTAGTTTTGGTCGTCAGTCTTC-TTTAGATCCGATCCGGA-GGAG 193
Query 231 TCCTGAGTCTCTT---AGC--TG-CGAGCCGCATATGTCTGTCCCCGAGAATCTTGATTC 284
|||||| ||| || ||| | |||||| |||||||| || || |||||||| |||||
Sbjct 194 TCCTGATTCTGTTAGGAGCGACGACGAGCCACATATGTCGGTGCCGGAGAATCTCGATTC 253
Query 285 GACGATGCAGCTTCTCTTTATGGCGAGTAAAGGTGATGTTA-ATGGCGTTGAGGAGCTGC 343
||||||||||||||||||||||| || ||||||||||| | | || | || ||||| |
Sbjct 254 CACGATGCAGCTTCTCTTTATGGCTAGCAAAGGTGATGTCAGA-GGAATCGAAGAGCTTC 312
Query 344 TTAATGAAGGAATAGATGTGAATAGCATTGATCTTGATGGTCGTACTGCTCTTCACATTG 403
|| |||||||||| ||||| |||||||| ||||||||||| ||||| || |||||||| |
Sbjct 313 TTGATGAAGGAATTGATGTTAATAGCATCGATCTTGATGGCCGTACGGCGCTTCACATCG 372
Query 404 CTTCCTGTGAAGGTCAT-TATGATGTTGTTAAGGTTCTTCTTAGCCGGAGAGCTAATATC 462
| | ||||| || ||| | || ||| ||||||| ||||||||||||||||||||| ||
Sbjct 373 CCGCTTGTGAGGGACATCT-TGGTGTCGTTAAGGCTCTTCTTAGCCGGAGAGCTAACATT 431
Query 463 GATGCTCGTGATCGTTGGGGTAGTACGGCGGCTGTTGATGCAAAGTATTATGGGAATGTT 522
|||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||| ||
Sbjct 432 GATGCTCGTGATCGATGGGGAAGTACGGCGGCTGCTGATGCAAAGTATTATGGGAAT-TT 490
Query 523 -GA-AGTTTATAATCTCTTGAAAGCTCGAGGCGCTAAAGCTCCGAAAACTAGAAAGACTC 580
|| | |||| ||||||||||| |||||||| ||||||| ||||||||| || |||||||
Sbjct 491 AGATA-TTTACAATCTCTTGAAGGCTCGAGGAGCTAAAGTTCCGAAAACCAGGAAGACTC 549
Query 581 CAATGACGGTAG-GGAATCCAAAAGAAGTTCCTGAGTATGAGCTTAATCCACTCGAGCTG 639
| ||||| || | ||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct 550 CGATGACTGT-GTCGAATCCACGAGAAGTTCCTGAGTATGAGCTTAATCCACTTGAGATT 608
Query 640 CAAGTCCGAAAAGTTGATGGCATTTCAAAGGGAACTTATCAAGTTGCTAAATGGAATGGC 699
||||| | |||| ||||||||| ||||||||| | |||||||| |||||||||||||||
Sbjct 609 CAAGTTAGGAAAGCTGATGGCATCTCAAAGGGAGCATATCAAGTAGCTAAATGGAATGGC 668
Query 700 ACGCGAGTCTCAGTAAAAATA-TTCGATAAAGATAGCTATTCAGATCCTGAACG-AGTAA 757
||||| || || || |||||| || |||||||||||||| ||||| || ||||| | |||
Sbjct 669 ACGCGTGTTTCGGTCAAAATACTT-GATAAAGATAGCTACTCAGACCCGGAACGCA-TAA 726
Query 758 ATGC-TTTCACAAACGAATTGACTTTGCTAGCAAAAGCT-CGGCATCCAAATATTGTTCA 815
| || ||| | | | |||||||| ||||||| ||||| | |||||||||||| || | ||
Sbjct 727 ACGCATTT-AGACATGAATTGACGTTGCTAGAAAAAG-TCCGGCATCCAAATGTTATCCA 784
Query 816 ATTTGTTGGAGCCGTCACTCAAAATCTACCGATGATGATTGTAGTTGAGTGTAATCCAAA 875
||||||||||| |||||||| ||| ||||||||||||||||||| |||| ||||| ||
Sbjct 785 GTTTGTTGGAGCTGTCACTCAGAATATACCGATGATGATTGTAGTCGAGTACAATCCGAA 844
Query 876 AGGTGATCTAAGTGTCTATCTTCAAAAGAAAGGTCGTCTTTCTCCTTCAAAAGCTCTGAG 935
||| ||| ||||||| ||||| ||||||||||| |||||||||||||| || || || ||
Sbjct 845 AGGAGATTTAAGTGTATATCTCCAAAAGAAAGGACGTCTTTCTCCTTCCAAGGCACTTAG 904
Query 936 ATTTGCTCTTGATATTGCTAGAGGAATGAACTACCTCCATGAATGTAAACCAGATCCGAT 995
|||||||||||||||||| || || |||||||||||||||||||||||||||||||| ||
Sbjct 905 ATTTGCTCTTGATATTGCCAGGGGCATGAACTACCTCCATGAATGTAAACCAGATCCAAT 964
Query 996 CATCCACTGCGAGT-TAATGCCAAAAAATATTTTGCTAGATAGAGGAGGGCAATTGAAGA 1054
||| ||||| || | ||| |||||||||||||||||| ||||||||||||||||| ||||
Sbjct 965 CATTCACTGTGA-TCTAAAGCCAAAAAATATTTTGCTGGATAGAGGAGGGCAATTAAAGA 1023
Query 1055 TCTCTGGTTTTGGTTTGATAA-AGTTGTC-AAAGATTGGAGAAGACA-GTGCAAAAGTAG 1111
|||| || |||||| |||||| | ||||| ||| ||| | |||||| | || |||||||
Sbjct 1024 TCTCGGGATTTGGTATGATAAGA-TTGTCGAAA-ATTTCACAAGACAAG-GCGAAAGTAG 1080
Query 1112 TGAACCACGAAGCTCAAATCGATAAGTCAAATTACTATATAGCACCCGAAATTTACAAAG 1171
|||||| |||| || || ||| ||||||||||| || ||||| || |||| ||||
Sbjct 1081 CAAACCACAAAGCACATATAGATCTCTCAAATTACTACATTGCACCAGAGGTTTATAAAG 1140
Query 1172 ATGAAGTCTTCGATAAAAGGG-CTGATGTGCATTCGTTTGGTGTCATTTTGTACGAGTTG 1230
| ||| | || || ||||| | |||| || || |||||||||||||| |||||| |
Sbjct 1141 ACGAAATATTTGACCGAAGGGTC-GATGCACACTCCTTTGGTGTCATTTTATACGAGATA 1199
Query 1231 ACCGAGGGAGTATCT-TTATTCCATCCTAAACCACCTGAAGAGGTTGC-AGAATCGATTT 1288
|| ||||||||| | || |||||||| | ||| |||||||| ||||| | ||| ||| |
Sbjct 1200 ACAGAGGGAGTACCAGTT-TTCCATCCGAGACCTCCTGAAGAAGTTGCGAAAAT-GATGT 1257
Query 1289 G-TATAGAAGGTAAA-AGACCAACAATCAGAACAAAGTCAAAGA-GTTACCCTCCGGA-A 1344
| | ||||||| ||| |||||| | | | ||| ||||||| || |||||||||| || |
Sbjct 1258 GCT-TAGAAGG-AAAGAGACCAGTATTTAAAACTAAGTCAA-GAAGTTACCCTCCAGATA 1314
Query 1345 TTGAA-AGAGTTGATTGAGGAATGCTGGCATCCAGAAATCAG-TGTGAGGCCAATATTCT 1402
| || ||||||||| ||| |||| |||||||||||| | | | | || || | |||||
Sbjct 1315 T--AAGAGAGTTGATAGAGAAATGTTGGCATCCAGAAGCC-GCTATTAGACCGACATTCT 1371
Query 1403 CTGAGATTATTATTCGGCTCGACAAGATAGTTA-CAAACTGTTCCAAGCAGGGTTGGTGG 1461
|||| ||||||||||| || ||||| ||||| | | || || || || || || ||||||
Sbjct 1372 CTGAAATTATTATTCGACTTGACAAAATAGT-AGCTAATTGCTCAAAACAAGGATGGTGG 1430
Query 1462 AAAGACACATTTAAGTTCCCTTGGAAATGAAATGGA 1497
||||||||||| |||||||||||||||| ||| |||
Sbjct 1431 AAAGACACATTCAAGTTCCCTTGGAAATAAAA-GGA 1465
> Ahg482101 jgi|Araly1|482101|fgenesh2_kg.4__1161__AT2G31800.1
Length=1795
Score = 516 bits (279), Expect = 2e-145
Identities = 691/883 (78%), Gaps = 55/883 (6%)
Strand=Plus/Plus
Query 94 TCGAGACAATTCTCGACAGGATCAATGAGACGAAC-ATTAAGCCGACAATTCACGCGCCA 152
|||||||||||||| || ||||| | | || || || || || ||||||||||| ||
Sbjct 77 TCGAGACAATTCTCAACTGGATCGCTTCGTCGTACGCTT-AGTCGTCAATTCACGCGTCA 135
Query 153 AAATTCTCTCGATCCACGGCGTAACAACATGAGATTCAGCTTCGGTCGTCAATCTTCGCT 212
| ||| | |||||| || || ||||| || | ||||| |||||||| ||||| || ||
Sbjct 136 AGCTTCACACGATCCTCGCCGGAACAATTTGCGGTTCAGTTTCGGTCGACAATCGTCTCT 195
Query 213 TGATCCGA-TCAGACGTAGTCCTG-A-GTCTCTTAGCTGCGAGCCGC-A-TATGTCTGTC 267
||||||| || | || ||||||| | || || || | || |||| | | || ||||
Sbjct 196 AGATCCGATTC-GCCGGAGTCCTGAAGGT-TC-TAAC--CG-TCCGCAACT-TG-CTGTA 247
Query 268 CCCGAGAATCTTGATTCGACGATGCAGCTTCTCTTTATGGCGAGTAAAGGTGATGTT-AA 326
|| || ||||| || | || ||||||||||| ||| |||| ||| |||||||||| ||
Sbjct 248 CCGGATAATCTCGACGCTACTATGCAGCTTCTATTTGTGGCTTGTAGAGGTGATGTTGAA 307
Query 327 TGGCGTTGAGGAGCTGCTTAATGAAGGAATAGATGTGAATAGCATTGATCTTGATGGTCG 386
|| ||| |||| |||||| |||||||||| ||||| |||||||| ||||||||||||||
Sbjct 308 -GGTGTTCAGGATCTGCTTGATGAAGGAATTGATGTTAATAGCATCGATCTTGATGGTCG 366
Query 387 TACTGCTCTTCACATTGCTTCCTGTGAAGGTCAT-TATGATGTTGTTAAGGTTCTTCTTA 445
||| |||||||| || ||| | |||||||||||| | ||||||||| ||| |||||||||
Sbjct 367 TACGGCTCTTCATATCGCTGCTTGTGAAGGTCATGT-TGATGTTGTGAAGCTTCTTCTTA 425
Query 446 GCC-GG-AGAGCTAATATCGATGCTCGTGATCGTTGGGGTAGTACGGCGGCTGTTGATGC 503
|| || || |||||||| |||||||||||||||||||| || ||||| |||| ||||||
Sbjct 426 -CCAGGAAG-GCTAATATTGATGCTCGTGATCGTTGGGGAAGCACGGCAGCTGCTGATGC 483
Query 504 AAAGTATTATGGGAATGTTGAAGTTTAT-AATC-TCTTGAAAGCTCGAGGCGCTAAAGCT 561
||||||||||| || | || |||| | || | | |||||||| || || ||||||| |
Sbjct 484 TAAGTATTATGGTAACATGGATGTTT-TCAA-CATTTTGAAAGCCCGTGGAGCTAAAGTT 541
Query 562 CCGAAAACTAGAAA-GACTCCAATGACGGTAGG-GAATCCAAAAGAAGTTCCTGAGTATG 619
|||||||| | ||| ||| || ||| || || ||| || |||||||||||||| |
Sbjct 542 CCGAAAACCA-AAAGGACACCGATGGTTGT-GGCGAACCCTCGTGAAGTTCCTGAGTACG 599
Query 620 AGCTT-AATCCACTCGAGCTGCAAGTCCGAAAAGTTGATGGCATTTCAAAGGGAACT-TA 677
|| || ||||||| ||||| ||||| || |||| |||||| || |||||||||| | ||
Sbjct 600 AG-TTAAATCCACAAGAGCTTCAAGTTCGGAAAGCTGATGGTATCTCAAAGGGAA-TATA 657
Query 678 TCAAGTTGCTAAATGGAATGGCACGCGA-GTCTCAGTAAAAATA-TTCGATAAAGATAGC 735
|||||| |||||||||||||| || | || || ||||| ||| || ||||| ||| |
Sbjct 658 TCAAGTGGCTAAATGGAATGGGAC-TAAGGTATCGGTAAAGATACTT-GATAAGGAT--C 713
Query 736 TATTC-A-GATCCTG-AACGAGTAAATGCTTTCACAA-ACGAA-TTGACTTTGCTAGCAA 790
| | | | |||| || ||| | ||||||| |||| || ||||| || ||||| | | |
Sbjct 714 TCTACAAGGATCATGAAACCA-TAAATGCCTTCA-AACACGAACTT-ACTTTATTCG-AG 769
Query 791 AAGCT-CGGCATCCAAATATTGTTCAATTTGTTGGAGCCGTCACTCAAAATCTACCGATG 849
||| | || ||||| ||| |||| |||||||||||||| || ||||||||| | || |||
Sbjct 770 AAGGTGCGTCATCCTAATGTTGTGCAATTTGTTGGAGCTGTTACTCAAAATGTCCCCATG 829
Query 850 ATGATTGTAGT-TGAGTGTAATCCAAAAGGTGATC-TAAGTGTCTATCTTCAAAAGAAAG 907
|||||||| || |||| | |||| |||||||| | | | | |||||||||||||||||
Sbjct 830 ATGATTGT-GTCCGAGTATCATCCTAAAGGTGACCTTGGGAG-CTATCTTCAAAAGAAAG 887
Query 908 GTCGTCTTTCTCCTTCAAAAGCTCTGAGATTTGCTCTTGATAT 950
||||||||||||| | |||| ||| |||||||| || |||||
Sbjct 888 GTCGTCTTTCTCCAGCCAAAGTTCTAAGATTTGCCCTCGATAT 930
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63534528660
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5