BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G59910.1
Length=2480
Score E
Sequences producing significant alignments: (Bits) Value
Ahg486455 jgi|Araly1|486455|fgenesh2_kg.5__2447__AT3G59910.1 3489 0.0
Ahg483529 jgi|Araly1|483529|fgenesh2_kg.4__2589__AT2G44090.2 1286 0.0
> Ahg486455 jgi|Araly1|486455|fgenesh2_kg.5__2447__AT3G59910.1
Length=2389
Score = 3489 bits (1889), Expect = 0.0
Identities = 2245/2405 (93%), Gaps = 71/2405 (3%)
Strand=Plus/Plus
Query 1 CAGGGtttttctcagcctctctttctc--t-t-tctctctctctgtctcAATGGAACTCT 56
||||||||||||||||||||||||||| | | ||||||||||| |||||||||||||||
Sbjct 1 CAGGGTTTTTCTCAGCCTCTCTTTCTCTTTCTCTCTCTCTCTCTCTCTCAATGGAACTCT 60
Query 57 TGTCCAGGGTTTGTTGTTGATTTCCTATGCCCATGGTCAAGAGATAGTGCG-TTTAAGAG 115
|||||||||||||||||||||||| |||| ||||| ||||||||||||||| || ||| |
Sbjct 61 TGTCCAGGGTTTGTTGTTGATTTCTTATG-CCATGTTCAAGAGATAGTGCGCTTAAAG-G 118
Query 116 AAGGCATCGAGGATTTACGCTGATTAGAATGAACTGTGTTGGTGGATTTTGATAGGGATC 175
||||||||||||||||||||| ||||||| |||||||| |||||||| |||||||||||
Sbjct 119 AAGGCATCGAGGATTTACGCTTATTAGAAGGAACTGTG--GGTGGATTCTGATAGGGATC 176
Query 176 AGTTCCGGG-TTTTGAGTTTTGGCCTTTGGTTTTGTAGATTTCGATG---ATGCAAGGAT 231
||| | ||| |||||||||| | |||||| ||||||||||||||||| |||||||||
Sbjct 177 AGTGCTGGGCTTTTGAGTTTCGTCCTTTGATTTTGTAGATTTCGATGCTTCTGCAAGGAT 236
Query 232 TGGATTTGCTATATACTTTGTTTAGTGT-GTGGTCTGTTGTGCGGATAGCTTTTGGATGA 290
||||||||||||| | | | ||| || | ||||||| |||| ||||||||||||||||||
Sbjct 237 TGGATTTGCTATACAGTAT-TTT-GTTTAGTGGTCTCTTGTCCGGATAGCTTTTGGATGA 294
Query 291 ATAAGCTTTGTGTGCTTCtttttttAGTTTGATTTGGAAAGTCACAGACTTGACAAGGAT 350
|||| | | | ||| ||||||||||||| ||| || || || | ||||||
Sbjct 295 ATAA----T-T-T--TTC------GAGTTTGATTTGGAGAGTTAC-GATTTAAGAAGGAT 339
Query 351 GGAGAAAGAAGGTGTGTGTGATACCATTAATTTAAGTGATCAGATGTACCCTGATGAGCC 410
||||||||||||||||||||||| ||| || ||||| |||||||||||||||||||||||
Sbjct 340 GGAGAAAGAAGGTGTGTGTGATAACATCAAGTTAAGAGATCAGATGTACCCTGATGAGCC 399
Query 411 TTTCTGTTCCGAGATGAAAACTGAAACCATTGCTTCATCTCAGAAATTTGAAGGAGGCGA 470
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 400 TTTCTGTTCCGAGATGAAAACTGAAACCATTGCTTCATCTCAGAAAACTGAAGGAGGCGA 459
Query 471 GGGGAGTAAAGTGGTTTTTTCGAGAGAGGCACCTTTAATAGGAAAGGATTCAGCTGGAAC 530
||||||||| |||||||||||||||||||||||||| |||||||||||| | ||||||||
Sbjct 460 GGGGAGTAATGTGGTTTTTTCGAGAGAGGCACCTTTGATAGGAAAGGATCCTGCTGGAAC 519
Query 531 TAATTCGGGAGAATGCTGTGGTTGTAGTGCTAAGAAACTAAATTTTAAAGGGGATGATGA 590
||||||||| |||||||| ||||||||||| |||||||||||||| |||| | |||||||
Sbjct 520 TAATTCGGGTGAATGCTGCGGTTGTAGTGCAAAGAAACTAAATTTCAAAGAGAATGATGA 579
Query 591 TCTCGTTGAGAAGGAAAATATTGAGCAGCAGAAAAAGCTTAATAGGCAAGAAAGAATTGA 650
|||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct 580 TCTCATTGAAAAGGAAAATATTGGGCAGCAGAAAAAGCTTAATAGGCAAGAAAGAATCGA 639
Query 651 GTTGGGACGGCTCTTCCAAGGCGCTGTTACCTCACTGGATTGGGAACTTGCTGAGAGATT 710
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 640 GTTGGGACGACTCTTCCAAGGCGCTGTTACCTCACTGGATTGGGAACTTGCTGAGAGATT 699
Query 711 GATTCAGTTGGCTGATCCTCAGACTTTAAATGATTTGTTGTGTGTTGGTCTAGATTCAGT 770
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 700 GATTCAGTTGGCTGATCCACAGACTTTAAATGATTTGTTGTGTGTTGGTCTTGATTCAGT 759
Query 771 TTGGTTCTTGAGTACAAAGCCTGAGTTTCAGGGGATCACCGGATTGATTAAGAAGATCAT 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 760 TTGGTTCTTGAGTACAAAGCCTGAGTTTCAGGGGATCACCGGATTGATTAAGAAGATCAT 819
Query 831 ATGTCATGGTGCTCATGACTTTACTAGAGCTACTCTTAGGACTTCGTTTCTCGCTTCTTG 890
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||
Sbjct 820 ATGTCATGGTGCTCATGACTTTACCAGGGCTACTCTTAGGACTTCGTTTCTCGCTTCATG 879
Query 891 TGTCTCTGCTTGCCAGAGCCGGACAATGAGTCTTTCTGATACAGTAACTGTTATGGCTCA 950
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 880 TGTCTCTGCTTGCCAGAGCCGGACAATGAGTCTTGCTGATACAGTAACTGTTATGGCTCA 939
Query 951 AAGGTTGCATGAGCGTCTCCAAGAGTGCAACGGGGATGAGATTCTAAAAGCAGAGGCTGG 1010
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 940 AAGGTTGCATGAGCGTCTCCAAGAGTGCAACGGGGATGAGATTCTGAAAGCAGAGGCTGG 999
Query 1011 TGCCAAAGTTCAGAAGTTCACTGAATGGGCTCTCAAATGTATAGGTTTCCACTCCCGATG 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1000 TGCCAAAGTTCAGAAGTTCACTGAATGGGCTCTCAAATGTATAGGTTTCCACTCCCGATG 1059
Query 1071 CCAGGGGGCAAAGGATAGAGTTAGCCAAAATTCGGCTGCTGAAATTGAACTACAACTTTC 1130
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 1060 CCAGGGGGCAAAGGATAGAGTTAGCCAAAATTCAGCTGCTGAGATTGAACTACAACTTTC 1119
Query 1131 TGCTTTCAAGATGTTCTTAGATCTAGCAGGAAACCATCTCTCAGGAAGAGACTTCACTGA 1190
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1120 TGCTTTCAAGATGTTCTTAGATCTAGCAGGAAACCATCTATCAGGAAGAGACTTCACTGA 1179
Query 1191 GGCCTTTGATGCAGCTTGTTTCCCGCTCACTCTGTTCTCCAACTCGTTTGATCCTGGCTG 1250
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1180 GGCCTTCGATGCAGCTTGTTTCCCGCTCACTCTGTTCTCCAACTCGTTTGATCCTGGCTG 1239
Query 1251 GGCATCTGGGATGTCAGCTACTGTTATACAGGGACTGCTCGGTATGCTTGTTGAAGGTGG 1310
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1240 GGCATCTGGAATGTCAGCTACTGTTATACAGGGACTGCTCGGTATGCTTGTTGAAGGTGG 1299
Query 1311 CGCAGATAATGTGAACCAATGTTTCCTTGAAGCTTCACGTTTTGGTAGTACAGAACTTGT 1370
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1300 CGCAGATAACGTGAATCAATGTTTCCTTGAAGCTTCACGTTTTGGTAGTACAGAACTTGT 1359
Query 1371 CCGCGTCTTATTGCAGATTGCCCAAAGGAACAGCTTAGATGTTGATGTGGACTTAGCTCT 1430
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1360 CCGCGTCTTATTGCAGATTGCGCAAAGGAACAGCTTAGATGTTGATGTGGACTTAGCTCT 1419
Query 1431 TGGTTTTGCCTCGCATTATTGTAAAATCGGAACAATGAAGTGCCTAGTGGAAGAAGGTAA 1490
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 1420 TGGTTTTGCCTCGCATTATTGTAAAATAGGGACAATGAAGTGCCTAGTGGAAGAAGGTAA 1479
Query 1491 TGCCATTGCCTTCTTGGGTCCCTTAATGAGAGCAGCAGAGAGAGGTTGCATGCAAGTTGT 1550
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1480 TGCCATTGCCTTCTTGGGCCCCTTAATGAGAGCAGCAGAGAGAGGTTGCATGCAAGTTGT 1539
Query 1551 TCAATGGTTTGTGAAAAGAGGTTGCCGTGACATGGAGCTTTGCTTGGCTCTAACAGCGGC 1610
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 1540 TCAATGGTTTGTGAAAAGAGGTTGCCGTGACATGGAACTTTGCTTGGCTCTAACAGCCGC 1599
Query 1611 CACTTCAAGTTGCCAAGTCGAGGTAGCTGCTTATCTCCTCCCTCGTGTTCCACCACCTGT 1670
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1600 CACTTCAAGTTGCCAAGTCGAGGTCGCTGCTTATCTCCTCCCTCGTGTTCCACCACCTGT 1659
Query 1671 CTTAACCGCTCTCAGCATCGAAATCCTCAAAGCAGCAGGAGAAAGAAGCGGAGGGTCTCT 1730
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1660 CTTAACCGCTCTCAGCATCGAAATCCTCAAAGCAGCTGGAGAAAGAAGCGGAGGGTCTCT 1719
Query 1731 CCAAGGAGTAGAGTTTCTTCTCAAATCAGACTTCTTAGGAGATTCCACGGCTACATACTC 1790
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1720 CCAAGGAGTAGAGTTTCTCCTCAAATCAGACTTCTTAGGAGATTCCACGGCTACATACTC 1779
Query 1791 AGTGGCAGACAGCATCGCAAGGTCATCAGAAGACGAATCCGTTCCTTCAGATCTAAAATC 1850
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1780 AGTTGCAGACAGCATCGCGAGGTCATCAGAAGACGAATCCGTTCCTTCAGATCTAAAATC 1839
Query 1851 GTTTCTCCAAGAACACTGGTCGGAGTCAGCTTTTGAGAAAGGAATGAGAGAAAGCCATGA 1910
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1840 ATTTCTCCAAGAACACTGGTCGGAGTCAGCTTTTGAGAAAGGAATGAGAGAAAGCCATGA 1899
Query 1911 CGATTTCATGAATTTCATGAGAGTTTTGAAAAAAGGGGAGTCAGCGATATCCTTAAGAGA 1970
| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 1900 CAATTTCATGAATTTCATGAGAGTTTTGAAAAAAGGCGAGTCCCCGATATCCTTAAGAGA 1959
Query 1971 CCTTCCTGCACCGCTAAGAGTAGCAATAGCGTACATGCCGCTGTACAGAGAGTGCATGAA 2030
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1960 CCTTCCTGCACCGCTAAGAGTAGCAATAGCCTACATGCCGCTGTACAGAGAGTGCATGAA 2019
Query 2031 AGCGGACGGTCGGTTACTGTCTCAGAGGCTAAGAGGACAGCTTGTAGAAGCAGTGAGACA 2090
|| ||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 2020 AGGGGATGGTCGGTTACTGTCTCAGAGGCTAAGAGGACAGCTTGTGGAAGCTGTGAGACA 2079
Query 2091 GCTTCAAGGCTGTGCTGTTGCAGTTGTGGAAGTAAGCCAGACTCGTAACCTTATGGCGGT 2150
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2080 GCTTCAAGGTTGTGCTGTTGCAGTTGTGGAAGTAAGCCAGACTCGTAACCTTATGGCGGT 2139
Query 2151 TTTGGAGCATCACCTTACCGCCATTTTCGATTGAAACAAATGGATTCTGCTTTTGGGCTT 2210
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2140 TTTGGAGCATCACCTTACCGCCATTTTCGATTGAAACAAATGGATTCTGCTTT-GGGCTT 2198
Query 2211 C---ACTGGTTTTCTAATTTCTACGAATAGTTGAAAATAAGCAAATAAATACTACGATTT 2267
| |||| |||||||||||||||||||||||||||| | ||| | |||
Sbjct 2199 CTTCACTGCTTTTCTAATTTCTACGAATAGTTGAAAA-A------TAA---CG--GAT-- 2244
Query 2268 AAATTAACGGATATTGGGATTTGGGTTTGAGATGACGAAGTGAGGttttttttttttttt 2327
| | | | |||||| ||||||||||||||||||||||||||||||
Sbjct 2245 A--T-A-----T---GGGATT-GGGTTTGAGATGACGAAGTGAGGTTTTTTT-------- 2284
Query 2328 tGTATAATTTCTTCTTATGATGCTTC-TATATTATGTCAGTCTCTTCTCCTCCATTTCTC 2386
||||||||| ||||||||||| | | | ||||||||||||||||||||||||||||| |
Sbjct 2285 -GTATAATTTGTTCTTATGATGATGCGTCTATTATGTCAGTCTCTTCTCCTCCATTTCCC 2343
Query 2387 TTATT 2391
|||||
Sbjct 2344 TTATT 2348
> Ahg483529 jgi|Araly1|483529|fgenesh2_kg.4__2589__AT2G44090.2
Length=2248
Score = 1286 bits (696), Expect = 0.0
Identities = 1196/1436 (83%), Gaps = 40/1436 (3%)
Strand=Plus/Plus
Query 751 TGTGTTGGTCTAGATTC-AGTTTGGTTCTTGAGTACAAAGCCTGAGTTTCAGGGG-ATCA 808
||| || || ||||||| | |||||||||||| ||| ||| |||||| | |||| ||||
Sbjct 529 TGTATTAGTTTAGATTCTA-TTTGGTTCTTGACCACAGAGCATGAGTTAC-GGGGAATCA 586
Query 809 CCGGATTGATT-AAGAAGATCATATGTCATGGTGCTCATGACTTTACTAGAGCTACTCTT 867
| | ||||||| | |||||||||||||||||||||||||||| |||||||||||| |||
Sbjct 587 CAGAATTGATTGCA-AAGATCATATGTCATGGTGCTCATGACTATACTAGAGCTACACTT 645
Query 868 AGGACTTCGTTTCTCGCTTCTTGTGTCTC-TGCTTGCCAGAGCCGGACAATGAGTCTTTC 926
|||||||||||||||||||| ||||| || | |||||||||| ||||| |||||||| |
Sbjct 646 AGGACTTCGTTTCTCGCTTCATGTGTTTCAT-CTTGCCAGAGTCGGACTGTGAGTCTTGC 704
Query 927 TGATACAGTAACTGTTATGGCTCAAAGGTTGCATGAGCGTCTCCAAGAGTGCAACGGGGA 986
|||||| |||||||||||||||||||||||||| ||||||||||||||||| || || ||
Sbjct 705 TGATACTGTAACTGTTATGGCTCAAAGGTTGCACGAGCGTCTCCAAGAGTGTAATGGTGA 764
Query 987 TG-AGATTCTAAAAGCAGAGGCTGGTGCCAAAGTTCAGAAGTTCACTGAATGGGCTCTCA 1045
|| || | || |||||||| |||||||| |||||||| ||||| ||||||||||| ||||
Sbjct 765 TGAAG-TCCTCAAAGCAGAAGCTGGTGCTAAAGTTCAAAAGTTTACTGAATGGGCCCTCA 823
Query 1046 AATGTATAGGTTTCCACTCCCGATGCCAGGGGGCAAAG-GATAGAGTTAGCCAAAATTCG 1104
||||||||||||| |||||||||||||| ||| | || |||| || || |||| | ||
Sbjct 824 AATGTATAGGTTTTCACTCCCGATGCCA-GGGTCCTAGAGATAAAGCTAACCAAGACTCA 882
Query 1105 GCTGCTGAAATTGAACTACAACTTTCTGCTTTCAAGATGTTCTTAGATCTAGCAGGAAAC 1164
|||||||| || |||| || ||||||||||||||||||||||||||||| |||||||||
Sbjct 883 GCTGCTGAGATCCAACTCCAGCTTTCTGCTTTCAAGATGTTCTTAGATCTTGCAGGAAAC 942
Query 1165 CATCTCTCAGG-AAGAGACTTCACTGAGGCCTTTGATGCAGCTTGTTTCCCGCTCACTCT 1223
||||| ||||| ||| || ||||| || ||||||||||||||||| ||||| || || ||
Sbjct 943 CATCTATCAGGAAAG-GATTTCACAGAAGCCTTTGATGCAGCTTGCTTCCCTCTTACGCT 1001
Query 1224 GTTCTCCAACTCGTTTGATCCTGGCTGGGCATCTGGGATGTCAGCTACTGTTATACAGGG 1283
||| || | ||| ||| |||| |||||||| ||||| || ||||||||||| ||||| ||
Sbjct 1002 GTTTTCTACCTCATTTAATCCCGGCTGGGCTTCTGGAATCTCAGCTACTGTCATACATGG 1061
Query 1284 ACTGCTCGGTATGCTTGTTGAAGGTGGCGCAGATAATGTGAACCAATGTTTCCTTGAAGC 1343
| ||||||||||||| || ||||| |||||||||||||| || || || |||||||||||
Sbjct 1062 ATTGCTCGGTATGCTGGTGGAAGGAGGCGCAGATAATGTAAATCAGTGCTTCCTTGAAGC 1121
Query 1344 TTCACGTTTTGGTAGTACAGAACTTGTCCGCGTCTTATTGCAGATTGCCCAAAGGAACAG 1403
||| |||||||| || ||||||||||| ||| |||| || |||||||| |||||||| ||
Sbjct 1122 TTCTCGTTTTGGGAGCACAGAACTTGTGCGCATCTTGTTACAGATTGCTCAAAGGAATAG 1181
Query 1404 CTTAGATGTTGATGTGGACTTAGCTCTTGGTTTTGCCTCGCATTATTGTAAAATCGGAAC 1463
|||||| || ||||| |||||||| || |||||||||||||||||| ||||||||| |||
Sbjct 1182 CTTAGACGTGGATGTTGACTTAGCACTGGGTTTTGCCTCGCATTATAGTAAAATCGAAAC 1241
Query 1464 AATGAAGTGCCTAGTGGAAGAAGGTAATGCCATTGCCTTCTTGGGTCCCTTAATGAGAGC 1523
||| | ||||| |||||||||||| |||||||||| |||||||||||||| ||||||||
Sbjct 1242 GATGGATTGCCTTGTGGAAGAAGGTCATGCCATTGCTTTCTTGGGTCCCTTGATGAGAGC 1301
Query 1524 AGCAGAGAGAGGTTGCATGCAAGTTGTTCAATGGTTTGTGAAAAGAGGTTGCCGTGACAT 1583
||| |||||||||||||||||||||||||||||||||||||||| ||| || ||||| ||
Sbjct 1302 AGCGGAGAGAGGTTGCATGCAAGTTGTTCAATGGTTTGTGAAAAAAGGCTGTCGTGAAAT 1361
Query 1584 GGAGCTTTGCTTGGCTCTAACAGCGGCCACTTCAAGTTGCCAAGTCGAGGTAGCTGCTTA 1643
|||||| ||||| ||||| ||||| ||||||||||| |||| || ||||| ||||||||
Sbjct 1362 GGAGCTATGCTTAGCTCTCACAGCCGCCACTTCAAGCAGCCAGGTTGAGGTCGCTGCTTA 1421
Query 1644 TCTCCT-CCCTCGTGTTCCACCACCTGT-CTTAACCGCTCTCAGCATCGAAATCCTCAAA 1701
|||||| ||| | ||||||| ||| || || | | ||||||||||| ||||||||||||
Sbjct 1422 TCTCCTTCCC-CATGTTCCAAGACCCGTTCTCA-CTGCTCTCAGCATTGAAATCCTCAAA 1479
Query 1702 GCAGCAGGAGAAAGAAGCGGAGGGTCTCTCCAAGGAGTAGAGTTTCTTCTCAAATCAGAC 1761
||||| || |||||||| || || || ||||| |||||||||||||| || ||||||||
Sbjct 1480 GCAGCCGGTGAAAGAAGTGGTGGTTCCCTCCACGGAGTAGAGTTTCTCCTTAAATCAGAT 1539
Query 1762 TTCTTAGGAGATTCCACG--GCTACATACTCAGTGGCAGACAGCATCGCAAGGTCATCAG 1819
||| | || ||| ||| | || ||||| ||||| ||||||| ||| |||| |||| |
Sbjct 1540 TTCCTCGGGGAT-CCA-GTAGCCACATATTCAGTTGCAGACACCATTGCAAAGTCA---G 1594
Query 1820 AAGACGAATCCGTTCCTTCAGATCTAAAATCGTTTCTCCAAGAACACTGGTCGGAGTCAG 1879
||||||| || |||||||||||||| |||||||||||||||||||||||||| ||| | |
Sbjct 1595 AAGACGAGTCTGTTCCTTCAGATCTCAAATCGTTTCTCCAAGAACACTGGTCAGAGGCTG 1654
Query 1880 CTTTTGAGAAAGGAATGAGAGAAAGCCATGACGATTTCATGAATTTCATGAGAGTTTTGA 1939
| || | ||||| |||||||||||| || ||||||||||||||||||| |||||||
Sbjct 1655 CATTCAACCAAGGATTGAGAGAAAGCCGGGAAAATTTCATGAATTTCATGAGGGTTTTGA 1714
Query 1940 AAAAAGGGGAGTCAGC-GATATCCT-TAAGAG-ACCTTCCTGCACCGCTAAGAGTAGCAA 1996
|| || ||||| || | || | ||| || | || || ||||| | ||||||||||
Sbjct 1715 AACTCGGAGAGTCTGCAG-TAAG-TATAA-AGGATCTCCCAGCACCATTGAGAGTAGCAA 1771
Query 1997 TAGCGTACATGCCGCTGTACAGAGAGTGCATGAAAGCGGACGGTCGGTTACTGTCTCAGA 2056
| || ||||||||||||||||||||||| |||| |||| || ||| | || || || |
Sbjct 1772 TTGCCTACATGCCGCTGTACAGAGAGTGTGTGAATGCGGGTGGGCGGCTGCTCTCACAAA 1831
Query 2057 GGCTAAGAGGACAGCTTGTAGAAGCAGTGAGACAGCTTCAAGGCTGT-GCTGTTG-CAGT 2114
|||||| |||||||| || ||||| || | |||||||||||||| | | ||| | ||
Sbjct 1832 AGCTAAGGGGACAGCTCGTGGAAGCTGTAAAACAGCTTCAAGGCT-TCGATGTAGACACA 1890
Query 2115 TGTGGAAGTAA-GCCAG---ACTCGTAACCTTATGGCGGTTTTGGAGCATCACCTT 2166
| ||||||| | || | || | | || ||||| ||||||||||||||||||
Sbjct 1891 -GAAGAAGTAAAGAAAGGTGA-TCATCAGCTAATGGCAGTTTTGGAGCATCACCTT 1944
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 93473461230
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5