BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G60980.1 Length=1437 Score E Sequences producing significant alignments: (Bits) Value Ahg899199 jgi|Araly1|899199|Al_scaffold_0005_3165 1509 0.0 Ahg899104 jgi|Araly1|899104|Al_scaffold_0005_3070 1426 0.0 Ahg897839 jgi|Araly1|897839|Al_scaffold_0005_1805 1271 0.0 Ahg939179 jgi|Araly1|939179|scaffold_503370.1 1092 0.0 > Ahg899199 jgi|Araly1|899199|Al_scaffold_0005_3165 Length=1224 Score = 1509 bits (817), Expect = 0.0 Identities = 1113/1251 (89%), Gaps = 39/1251 (3%) Strand=Plus/Plus Query 68 ATGTCTCTGATCGGCCGCCTCAATCTTGGTCGGCGCTTCTGCACCGCCGTGCCAAGAAGA 127 |||||||||||| |||||||||||||| ||||||| |||| ||||||| ||||||||||| Sbjct 1 ATGTCTCTGATCTGCCGCCTCAATCTTTGTCGGCGTTTCTCCACCGCCCTGCCAAGAAGA 60 Query 128 TCGGAAGACATAATGTCAAACCCAGATTGCCG-CCCTTCTG-ATCTATGCTTGAGGGTCT 185 |||| ||||||||||||||||||||||| || ||| | | | ||||||||||| |||| Sbjct 61 GCGGAGGACATAATGTCAAACCCAGATTGTCGTCCC-GC-GCAGCTATGCTTGAGAGTCT 118 Query 186 CGTACTTGATCAGATGCGTTGGGGATCTCGACACGGCGGCGAAGTACGCTCGTTTGGCTG 245 ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct 119 CGTACTTGATCAGATTCGTTGGAGATCTCGACACGGCGGCGAAGTACGCTCGTTTGGCTG 178 Query 246 TTTTCACC-AGCATCAAATCGGAGTCAACAACAACAATATGTCAATCCATCATCGGAGGC 304 |||||||| | ||||||||||||| | ||| || ||| ||||||| |||||||||||||| Sbjct 179 TTTTCACCGA-CATCAAATCGGAGGCCACAGCAGCAACATGTCAAGCCATCATCGGAGGC 237 Query 305 ATGTTACGGGATAAAAGGCTCAAGGACGCTTATGATCTCTACGAGTTCTTCTTCAATCAG 364 ||||| | | ||||||||| | | |||||||| ||||||||||| |||||||||||||| Sbjct 238 ATGTTGCAGAATAAAAGGCACGATGACGCTTACGATCTCTACGATTTCTTCTTCAATCA- 296 Query 365 CAT-AACCTCAGACCCAACAGCCATTGCTGGAACTACATCATCGAATCTGGTTTCCAACA 423 | | || ||||||||||||||||||||||| |||||||||||||||||| ||||| |||| Sbjct 297 CTTTAAGCTCAGACCCAACAGCCATTGCTGTAACTACATCATCGAATCTCGTTTCAAACA 356 Query 424 AGGTCTT-GTCAACGATGCTCT-GCATTTCCACCACCGATGCATC-AATTCCGGTCA-GG 479 |||| || || |||| ||||| | |||||||||||||| |||| ||| | ||| | || Sbjct 357 AGGT-TTAGTTGACGAAGCTCTCGG-TTTCCACCACCGATCCATCGAAT-CTGGT-ATGG 412 Query 480 TCCACGACTACCCAAGCGACGATTCTTTCAGGATCTTGACTAAAGGGTTAGTCCACTCCG 539 ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||| Sbjct 413 TCCACGACTACCCAAGCAACGATACTTTCAGGGTCTTGACTAAAGGGTTAGTCCACTCCG 472 Query 540 GTCGGTTGGACCAAGCCGAAGCCTTTCTTAGAGGCAGGACAGTCAATCGAACCACCTACC 599 |||| || ||||||||||||||| | ||||||| |||||||||| || | | || ||||| Sbjct 473 GTCGATTAGACCAAGCCGAAGCCATGCTTAGAGACAGGACAGTCGATAGGATCATCTACC 532 Query 600 CAGATCACGTGGCGTACAACAATCTGATTCGCGGGTTTTTGGATCTTGGAAATTTTAAA- 658 |||||||||||||||||||| |||||||||||||||||||||||||||| ||||| | Sbjct 533 CAGATCACGTGGCGTACAACTATCTGATTCGCGGGTTTTTGGATCTTGGGAATTT-AGGC 591 Query 659 AAGGCGAATCTAGTCTTGGGCGAATTCAAACGCTTGTTT-TTGATTGCCCTATCCGAGAC 717 ||||||||||||||| ||| ||||||||||||||||||| || ||| |||| || ||||| Sbjct 592 AAGGCGAATCTAGTCCTGGACGAATTCAAACGCTTGTTTCTT-ATTACCCTCTCTGAGAC 650 Query 718 CAAAGATGATTTGCACCATTCAAACTATGAAAACAGAGTCGCATTCCTGATGGCCACATT 777 ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct 651 CAAAGATGATTTGCACCATTCAAACTATGAAAACAGAGTGGCATTCGTGATGGCCACATT 710 Query 778 CATGGAGTACTGGTTTAAGCAAGGTAAACAGGTGGAAGCTATGGAGTGTTACAACCGCTG 837 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 711 CATGGAGTACTGGTTTAAGCAAGGTAAAGAGGTGGAAGCTATGGAGTGTTACAACCGTTC 770 Query 838 TGTTCTATCAAACAGGTTACTGGTTTGTGCCGAAACGGGTAACGCCCTTTTGAAAGTCCT 897 ||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||| Sbjct 771 TGTTCTATCAAACAGGTTACTGGCTTGTGCCGAAACGGCTAACGCCCTTTTGGTAGTCCT 830 Query 898 GCTCAAATACGGTGaaaaaaaaaaTGCTTGGGCATTGTACCATGA-ACTCTTAGATAAAA 956 ||||||||||||||| |||||| |||||||||||||||||||||| | |||||||||||| Sbjct 831 GCTCAAATACGGTGAGAAAAAACATGCTTGGGCATTGTACCATGATA-TCTTAGATAAAA 889 Query 957 ATGGAACCGGTAAGGGTTGCTTGGACTCTGATACCATTAAGATAATGGTGGACGAGTGCT 1016 | | | || ||| || ||||||||||||||||||||||||||||||| | Sbjct 890 GT--A---G--AA------CTT--ACCCTGATACCATTAAGATAATGGTGGACGAGTGTT 934 Query 1017 TTGATATGGGTTGGTTTAGTGAGGCTATGGAGACCTACAAAAAGGCGAGACCCAAGAACG 1076 ||||||||||| | ||||| ||||||||| |||||||||| ||||||||| |||||||| Sbjct 935 TTGATATGGGTCGATTTAGGGAGGCTATGAAGACCTACAACAAGGCGAGAGCCAAGAACC 994 Query 1077 ACTACCTCAGTGACAAATACATTATTACAAGGTTTTG-CGAAAACAGGATGTTGTCAGAA 1135 | ||||||||||||| ||||||| |||||| || ||| | ||||| |||||||||||||| Sbjct 995 ATTACCTCAGTGACATATACATTTTTACAAAGTGTTGTC-AAAACGGGATGTTGTCAGAA 1053 Query 1136 GCAGAGTCTGTTTTTGTTGATTCACTTGCTGATGATTTTGGATATATTGATGTTAACACT 1195 ||||||||| | |||| ||||||||||||||||||||| | ||| ||||||||| ||||| Sbjct 1054 GCAGAGTCTATCTTTGCTGATTCACTTGCTGATGATTTCGCATACATTGATGTTGACACT 1113 Query 1196 TATAAAACAATGATCGATGCTTATGTGAAGGCTGGGAGAATACATGATGCTATAAAAACC 1255 | |||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||| Sbjct 1114 TCTAAAACAATGATGGATTCTTATGTGAAGGCTGGGAGAATCCATGATGCTATAAAAACC 1173 Query 1256 TCCAACAAGATGATCGATGCAACTCTAAAGGAGGTCTCCCATCTCTTTTGA 1306 ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1174 TCCAACAAGATGATCGATGCAACTCTACAGGAGGTCTCCCATCTCTTTTGA 1224 > Ahg899104 jgi|Araly1|899104|Al_scaffold_0005_3070 Length=1242 Score = 1426 bits (772), Expect = 0.0 Identities = 1114/1270 (88%), Gaps = 59/1270 (5%) Strand=Plus/Plus Query 68 ATGTCTCTGATCGGCCGCCTCAATCTTGGTCGGCGCTTCTGCACCGCCGTGCCAAGAAGA 127 |||||||||||| |||||||||||||||||||||| |||| ||||||| ||||||||||| Sbjct 1 ATGTCTCTGATCTGCCGCCTCAATCTTGGTCGGCGTTTCTCCACCGCCCTGCCAAGAAGA 60 Query 128 TCGGAAGACATAATGTCAAACCCAGATTGCCGCCCTTCTG-ATCTATGCTTGAGGGTCTC 186 |||| |||||||||||||||||||||||||| ||| | | | ||||||||||| ||| | Sbjct 61 GCGGAGGACATAATGTCAAACCCAGATTGCCGTCCTAC-GCAGCTATGCTTGAGAGTCAC 119 Query 187 GTACTTGATCAGATGCGTTGGGGATCTCGACACGGCGGCGAAGTACGCTCGTTTGGCTGT 246 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct 120 GTACTTGATCAGATTCGTTGGAGATCTCGACACGGCGGCGAAGTACGCTCGTTTGGCTGT 179 Query 247 TTTCACCAGCA-TCAAATCGGAGTCAACAACAACA-ATATGTCAATCCATCATCGGAGGC 304 ||||||||| | ||||||||||| | |||| || | | |||||||||||||||||||||| Sbjct 180 TTTCACCAG-ATTCAAATCGGAGACCACAATAA-AGACATGTCAATCCATCATCGGAGGC 237 Query 305 ATGTTACGGGATAAAAGGCTCAAGGACGCTTATGATCTCTACGAGTTCTTCTTCAATCAG 364 ||||| ||||||||||||| | |||| ||||| ||||||| ||| |||||||||||| || Sbjct 238 ATGTTGCGGGATAAAAGGCCCGAGGATGCTTACGATCTCTTCGATTTCTTCTTCAATGAG 297 Query 365 CATAACCTCAGACCCAACAGCCATTGCTGGAACTACAT-CATCGAATCTGGTTTCCAACA 423 ||||| || | || |||||||||||||||||||||||| | ||||||||||||| ||||| Sbjct 298 CATAAGCTAATACGCAACAGCCATTGCTGGAACTACATGC-TCGAATCTGGTTTACAACA 356 Query 424 AGGTC-TTGTCAACGATGCTCTGC-ATTTCCACCACCGATGCATC-AATTCCGGT-CAG- 478 ||| | |||| |||||||||| | | || ||||||| | || |||| ||| || Sbjct 357 AGG-CGTTGTTGACGATGCTCT-CGAATTGTACCACCGGCCCTTCAAATT-TGGTAAAGA 413 Query 479 -GTCCACGACTACCCAAGCGA-CGATTCTTTCAGGATCTTGACTAAAGGGTTAGTCCACT 536 ||||||||||||||| | |||| |||||||| || ||||||||||||||||||||| Sbjct 414 AATCCACGACTACCCAA-ATACCGATACTTTCAGGGTCATGACTAAAGGGTTAGTCCACT 472 Query 537 CCGGTCGGTTGGACCAAGCCGAAGCCTTTCTTAGAGGCAGGACAGTCAATCGAACCACCT 596 ||||||| |||||| ||||||||||| | ||||||| ||||| |||| || | | || || Sbjct 473 CCGGTCGATTGGACGAAGCCGAAGCCGTGCTTAGAGACAGGAAAGTCGATAGGATCATCT 532 Query 597 ACCCAGATCACGTGGCGTACAACAATCTGATTCGCGGGTTTTTGGATCTTGGAAATTTTA 656 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 533 ACCCAGATCACGTGGCGTACAACAATCTGATTCGCGGGTTTTTGGATCTTGGGAATTT-A 591 Query 657 AA-AAGGCGAATCTAGTCTTGGGCGAATTCAAACGCTTGTTTTTGATTGCCCTATCCGAG 715 | |||||| |||||||||||| ||||||||| ||||||||||||||||| || |||||| Sbjct 592 GACAAGGCGCATCTAGTCTTGGACGAATTCAAGCGCTTGTTTTTGATTGCTCTTTCCGAG 651 Query 716 ACCAAAGATGATTTGCACCATTCAAACTATGAAAACAGAGTCGCATTCCTGATGGCCACA 775 |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct 652 ACCAAAGATGATTTGCACCATTCAAACTATGAAAGCAGAGTCGCATTCGTGATGGCCACA 711 Query 776 TTCATGGAGTACTGGTTTAAGCAAGGTAAACAGGTGGAAGCTATGGAGTGTTACAACCGC 835 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 712 TTCATGGAGTACTGGTTTAAGCAAGGTAAAGAGGTGGAAGCTATGGAGTGTTACAACCGT 771 Query 836 TGTGTTCTATCAAACAGGTTACTGGTTTGTGCCGAAACGGGTAACGCCCTTTTGAAAGTC 895 | ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct 772 TCTGTTCTATCAAACAGGTTACTTGTTTGTGCCGAAACGGGTAACGCCCTTTTGGTAGTC 831 Query 896 CTGCTCAAATACGGTGaaaaaaaaaaTGCTTGGGCATTGTACCATGAACTCTTAGATAAA 955 ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct 832 CTGCTCAAATACGGTGAGAAAAAACATGCTTGGGCATTGTACCATGAACTCTTAGAT--- 888 Query 956 AATGGAACCGGTAAGGGTTGCTTGGACTCTGATACCATTAAGATAATGGTGGACGAGTGC 1015 | ||| | || | | | |||||||||||||||||||||||||||||||||| Sbjct 889 ---G-AAC-G-TA-GAA---CA-G-ACTCTGATACCATTAAGATAATGGTGGACGAGTGT 936 Query 1016 TTTGATATGGGTTGGTTTAGTGAGGCTATGGAGACCTACAAAAAGGCGAGACCCAAGAAC 1075 |||||||||||| | || | |||||||||||||||||||| ||||||||| |||||||| Sbjct 937 TTTGATATGGGTCGACTTGGCGAGGCTATGGAGACCTACAAGAAGGCGAGAGCCAAGAAC 996 Query 1076 GA-CTACCT-C-AGT-----G-A--CAA--A----TACATTATTACAAGGTTTTGCGAAA 1118 | || | | | | | | | ||| | |||||||| ||||||| |||||||| Sbjct 997 -ATCT-CTTTCTATTTTACTGTATTCAATGACGGATACATTATCACAAGGTGTTGCGAAA 1054 Query 1119 ACAGG-ATGTTGTCAGAAGCAGAGTCTGTTTTTGTTGATTCACTTGCTGATGATTTTGGA 1177 || || ||||||||||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct 1055 AC-GGCATGTTGTCAGAAGCAGAGTCTGTCTTTGTTGATTCACTTGCTGATGATATTGGA 1113 Query 1178 TATATTGATGTTAACACTTATAAAACAATGATCGATGCTTATGTGAAGGCTGGGAGAATA 1237 || |||||||||| |||| ||||||||||||||||||||||||||||||||| ||||| Sbjct 1114 TACGTTGATGTTAAGACTTTTAAAACAATGATCGATGCTTATGTGAAGGCTGGAAGAAT- 1172 Query 1238 C-ATGATGCTATAAAAACCTCCAACAAGATGATCGATGCAACTCTAAAGGAGGTCTCCCA 1296 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1173 CGATGATGCTATAAAAACCTCCAACAAGATGATCGATGCAACTCTAAAGGAGGTCTCCCA 1232 Query 1297 TCTCTTTTGA 1306 |||||||||| Sbjct 1233 TCTCTTTTGA 1242 > Ahg897839 jgi|Araly1|897839|Al_scaffold_0005_1805 Length=1218 Score = 1271 bits (688), Expect = 0.0 Identities = 1076/1256 (86%), Gaps = 55/1256 (4%) Strand=Plus/Plus Query 68 ATGTCTCTGATCGGCCGCCTCAA---TCTTGGTCGGCGCTTCTGCACCGCCGTGCCAAGA 124 ||||||| |||| |||||||||| |||||||||||| |||| | ||||| ||||||| Sbjct 1 ATGTCTCAGATCTGCCGCCTCAATCTTCTTGGTCGGCGTTTCTTCGCCGCCATGCCAAGC 60 Query 125 AGATCGGAA-GACATAATGTCAAACCCAGATTGCCG-CCCTTCTG-ATCTATGCTTGAGG 181 ||| | ||| || ||||||||||||||||||||||| ||| | | | ||||||||||| Sbjct 61 AGA-CCGAAGGAGATAATGTCAAACCCAGATTGCCGTCCC-GC-GCAGCTATGCTTGAGA 117 Query 182 GTCTCGTACTTGATCAGATGCGTTGGGGATCTCGACACGGCGGCGAAGTACGCTCGTTTG 241 ||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 118 GTCACGTACTTGATCAGATTCGTTGGTGATCTCGACACGGCGGCGAAGTACGCTCGTTTG 177 Query 242 GCTGTTTTCACCAGCATCAAATCGGAGTCAACAACAACAATATGTCAATCCATCATCGGA 301 ||||||||||||||||||||||||||| | ||| || ||| ||||||| ||||||||||| Sbjct 178 GCTGTTTTCACCAGCATCAAATCGGAGGCCACAGCAGCAACATGTCAAGCCATCATCGGA 237 Query 302 GGCATGTTACGGGATAAAAGGCTCAAGGACGCTTATGATCTCTACGAGTTCTTCTTCAAT 361 |||||||| | | ||||||||| | | |||||||| ||||||||||| |||||||||||| Sbjct 238 GGCATGTTGCAGAATAAAAGGCACGATGACGCTTACGATCTCTACGATTTCTTCTTCAAT 297 Query 362 CAGCAT-AACCTCAGACCCAACAGCCATTGCTGGAACTACATCATCGAATCTGGTTTCCA 420 || | | || ||||||||||||||||||||||| |||||||||||||||||| ||||| | Sbjct 298 CA-CTTTAAGCTCAGACCCAACAGCCATTGCTGTAACTACATCATCGAATCTCGTTTCAA 356 Query 421 ACAAGGTCTT-GTCAACGATGCTCT-GCATTTCCACCACCGATGCATC-AATTCCGGTCA 477 ||||||| || || |||| ||||| | ||||||| |||||| |||| ||| | ||| | Sbjct 357 ACAAGGT-TTAGTTGACGAAGCTCTCGG-TTTCCACAACCGATCCATCGAAT-CTGGT-A 412 Query 478 -GGTCCACGACTACCCAAGCGACGATTCTTTCAGGATCTTGACTAAAGGGTTAGTCCACT 536 ||||||||||||||||||| | ||| |||| ||| ||||||||||| ||||||||||| Sbjct 413 TGGTCCACGACTACCCAAGCCAGGATACTTTTAGGGTCTTGACTAAATGGTTAGTCCACG 472 Query 537 CCGGTCGGTTGGACCAAGCCGAAGCCTTTCTTAGAGGCAGGACAGTCAATCGAACCACCT 596 ||||||| |||||||||| |||||||| ||||||| |||||||||| | | ||||||| Sbjct 473 CCGGTCGAATGGACCAAGCGGAAGCCTTGCTTAGAGACAGGACAGTCGGTAGGACCACCT 532 Query 597 ACCCAGATCACGTGGCGTACAACAATCTGATTCGCGGGTTTTTGGATCTTGGAAATTTTA 656 |||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||| | Sbjct 533 ACCCAGATCACGTGGCGTACAAGAATCTGATTCGTGGGTTTTTGGATCTTGGGGATTT-A 591 Query 657 AA-AAGGCGAATCTAGTCTTGGGCGAATTCAAACGCTTGTTTT-TGATTGCCCTATCCGA 714 | |||||| |||||||||||| ||||||||||||||| |||| | |||||||||||||| Sbjct 592 GACAAGGCGGATCTAGTCTTGGCCGAATTCAAACGCTTATTTTCT-ATTGCCCTATCCGA 650 Query 715 GACCAAAGATGATTTGCACCATTCAAACTATGAAAACAGAGTCGCATTCCTGATGGCCAC 774 |||||||||||||| || | | ||||||||||||||||||||| ||||||||||| Sbjct 651 GACCAAAGATGATT--CA--A---A--CTATGAAAACAGAGTCGCATTTCTGATGGCCAC 701 Query 775 ATTCATGGAGTACTGGTTTAAGCAAGGTAAACAGGTGGAAGCTATGGAGTGTTACAACCG 834 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 702 GTTCATGGAGTACTGGTTTAAGCAAGGTAAAGAGGTGGAAGCTATGGAGTGTTACAACCT 761 Query 835 CTGTGTTCTATCAAACAGGTTACTGGTTTGTGCCGAAACGGGTAACGCCCTTTTGAAAGT 894 |||||| || |||||| ||||| |||||| | ||||| || ||||||||||||||||| Sbjct 762 TTGTGTTATAGCAAACAAGTTACCGGTTTGCACAGAAACTGGCAACGCCCTTTTGAAAGT 821 Query 895 CCTGCTCAAATACGGTGaaaaaaaaaaTGCTTGGGCATTGTACCATGAACTCTTAGATAA 954 |||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||| Sbjct 822 CCTGCTCAAATACGGTGAGAAAAAACATGCTTGGGCTTTGTACCATGAACTCTTAGATAA 881 Query 955 AAATGGAACCGGTAAGGGTTGCTTGGACTCTGATACCATTAAGATAATGGTGGACGAGTG 1014 | || | | || | | || |||||||||||||||||||| | |||||||| Sbjct 882 A---GGTA--G--AA------CA-G-ACCCTGATACCATTAAGATAATGATAGACGAGTG 926 Query 1015 CTTTGATATGGGTTGGTTTAGTGAGGCTATGG-AGACCTACAAAAAGGCGAGACCCAAGA 1073 |||||||||||| | ||||| |||||| ||| |||||||||| ||||| || |||||| Sbjct 927 TTTTGATATGGGTCGATTTAGCGAGGCT-TGGGAGACCTACAACAAGGCTAGTGCCAAGA 985 Query 1074 ACGACTACCTCAGTGACAAATACATTATTACAAGGTTTTGCGAAAACAGGATGTTGTCAG 1133 || ||| ||||||||||| |||||||||||||||||||||| ||||| ||||||| |||| Sbjct 986 ACCACTTCCTCAGTGACAGATACATTATTACAAGGTTTTGCCAAAACGGGATGTTATCAG 1045 Query 1134 AAGCAGAGTCT-GT-TTTTGTTGATTCACTTGCTGATGATTTTGGATATATTGATGTTAA 1191 ||||| ||| | || |||| |||||||||| |||||||| || || ||||||||||| Sbjct 1046 AAGCACAGT-TAGTCTTTTAC-GATTCACTTGAAGATGATTTAGGCTACATTGATGTTAA 1103 Query 1192 CACTTATAAAACAATGATCGATGCTTATGTGAAGGCTGGGAGAATAC-ATGATGCTATAA 1250 || || ||||||| |||| ||||||| ||| |||| |||| | |||||||||| | Sbjct 1104 CATTTTTAAAACACTGATTGATGCTTTTGTCAAGGATGGGTTCCC-CGATGATGCTATCA 1162 Query 1251 AAACCTCCAACAAGATGATCGATGCAACTCTAAAGGAGGTCTCCCATCTCTTTTGA 1306 ||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 1163 AAATCTCCAACAAGATGATCGATTCAACTCTAAAGGAGGTCTCCCATCTCGTTTGA 1218 > Ahg939179 jgi|Araly1|939179|scaffold_503370.1 Length=1504 Score = 1092 bits (591), Expect = 0.0 Identities = 916/1066 (86%), Gaps = 49/1066 (5%) Strand=Plus/Plus Query 63 TAATAATGTCTCTGATCGGCCGCCTCAA---TCTTGGTCGGCGCTTCTGCACCGCCGTGC 119 |||||||||||| |||| |||||||||| |||||||||||| |||| | ||||| ||| Sbjct 16 TAATAATGTCTCAGATCTGCCGCCTCAATCTTCTTGGTCGGCGTTTCTTCGCCGCCATGC 75 Query 120 CAAGAAGATCGGAA-GACATAATGTCAAACCCAGATTGCCG-CCCTTCTG-ATCTATGCT 176 |||| ||| | ||| || ||||||||||||||||||||||| ||| | | | ||||||| Sbjct 76 CAAGCAGA-CCGAAGGAGATAATGTCAAACCCAGATTGCCGTCCC-GC-GCAGCTATGCT 132 Query 177 TGAGGGTCTCGTACTTGATCAGATGCGTTGGGGATCTCGACACGGCGGCGAAGTACGCTC 236 |||| ||| ||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 133 TGAGAGTCACGTACTTGATCAGATTCGTTGGTGATCTCGACACGGCGGCGAAGTACGCTC 192 Query 237 GTTTGGCTGTTTTCACCAGCATCAAATCGGAGTCAACAACAACAATATGTCAATCCATCA 296 ||||||||||||||| |||||||||||||||| | ||| || ||| ||||||| |||||| Sbjct 193 GTTTGGCTGTTTTCAGCAGCATCAAATCGGAGGCCACAGCAGCAACATGTCAAGCCATCA 252 Query 297 TCGGAGGCATGTTACGGGATAAAAGGCTCAAGGACGCTTATGATCTCTACGAGTTCTTCT 356 ||||||||||||| | | ||||||||| | | |||||||| ||||||||||| ||||||| Sbjct 253 TCGGAGGCATGTTGCAGAATAAAAGGCACGATGACGCTTACGATCTCTACGATTTCTTCT 312 Query 357 TCAATCAGCAT-AACCTCAGACCCAACAGCCATTGCTGGAACTACATCATCGAATCTGGT 415 ||||||| | | || ||||||||||||||||||||||| |||||||||||||||||| || Sbjct 313 TCAATCA-CTTTAAGCTCAGACCCAACAGCCATTGCTGTAACTACATCATCGAATCTCGT 371 Query 416 TTCCAACAAGGTCTT-GTCAACGATGCTCT-GCATTTCCACCACCGATGCATC-AATTCC 472 ||| |||||||| || || |||| ||||| | |||||||||||||| |||| ||| | Sbjct 372 TTCAAACAAGGT-TTAGTTGACGAAGCTCTCGG-TTTCCACCACCGATCCATCGAAT-CT 428 Query 473 GGTCA-GGTCCACGACTACCCAAGCGACGATTCTTTCAGGATCTTGACTAAAGGGTTAGT 531 ||| | ||||||||||||||||||| | ||| |||||||| ||||||||||| ||||||| Sbjct 429 GGT-ATGGTCCACGACTACCCAAGCCAGGATACTTTCAGGGTCTTGACTAAATGGTTAGT 487 Query 532 CCACTCCGGTCGGTTGGACCAAGCCGAAGCCTTTCTTAGAGGCAGGACAGTCAATCGAAC 591 |||| ||||||| |||||||||| |||||||| ||||||| |||||||||| | | || Sbjct 488 CCACGCCGGTCGAATGGACCAAGCGGAAGCCTTGCTTAGAGACAGGACAGTCGGTAGGAC 547 Query 592 CACCTACCCAGATCACGTGGCGTACAACAATCTGATTCGCGGGTTTTTGGATCTTGGAAA 651 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct 548 CACCTACCCAGATCACGTGGCGTACAAGAATCTGATTCGCGGGTTTTTGGATCTTGGGGA 607 Query 652 TTTTAAA-AAGGCGAATCTAGTCTTGGGCGAATTCAAACGCTTGTTTT-TGATTGCCCTA 709 ||| | | |||||| |||||||||||| |||||||||||| ||||||| | ||||||||| Sbjct 608 TTT-AGACAAGGCGGATCTAGTCTTGGCCGAATTCAAACGTTTGTTTTCT-ATTGCCCTA 665 Query 710 TCCGAGACCAAAGATGATTTGCACCATTCAAACTATGAAAACAGAGTCGCATTCCTGATG 769 ||||||||||||||||||| || | | ||||||||||||||||||||| |||||| Sbjct 666 TCCGAGACCAAAGATGATT--CA--A---A--CTATGAAAACAGAGTCGCATTTCTGATG 716 Query 770 GCCACATTCATGGAGTACTGGTTTAAGCAAGGTAAACAGGTGGAAGCTATGGAGTGTTAC 829 ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 717 GCCACGTTCATGGAGTACTGGTTTAAGCAAGGTAAAGAGGTGGAAGCTATGGAGTGTTAC 776 Query 830 AACCGCTGTGTTCTATCAAACAGGTTACTGGTTTGTGCCGAAACGGGTAACGCCCTTTTG 889 |||| |||||| || |||||| ||||| |||||| | ||||| || |||||||||||| Sbjct 777 AACCTTTGTGTTATAGCAAACAAGTTACCGGTTTGCACAGAAACTGGCAACGCCCTTTTG 836 Query 890 AAAGTCCTGCTCAAATACGGTGaaaaaaaaaaTGCTTGGGCATTGTACCATGAACTCTTA 949 || |||||||||||||||||||| |||||| |||||||||| |||||||||||||||||| Sbjct 837 AATGTCCTGCTCAAATACGGTGAGAAAAAACATGCTTGGGCTTTGTACCATGAACTCTTA 896 Query 950 GATAAAAATGGAACCGGTAAGGGTTGCTTGGACTCTGATACCATTAAGATAATGGTGGAC 1009 |||||| || | | || | | || |||||||||||||||||||| | ||| Sbjct 897 GATAAA---GGTA--G--AA------CA-G-ACCCTGATACCATTAAGATAATGATAGAC 941 Query 1010 GAGTGCTTTGATATGGGTTGGTTTAGTGAGGCTATGG-AGACCTACAAAAAGGCGAGACC 1068 ||||| |||||||||||| | ||||| |||||| ||| ||||||||| ||||| || | Sbjct 942 GAGTGTTTTGATATGGGTCGATTTAGCGAGGCT-TGGGAGACCTACACCAAGGCTAGTGC 1000 Query 1069 CAAGAACGACTACCTCAGTGACAAATACATTATTACAAGGTTTTGC 1114 ||||||| ||| ||||||||||| ||||| |||||||| || |||| Sbjct 1001 CAAGAACCACTTCCTCAGTGACAGATACAATATTACAAAGTGTTGC 1046 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 53745335695 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5