BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G61380.1
Length=2444
Score E
Sequences producing significant alignments: (Bits) Value
Ahg486612 jgi|Araly1|486612|fgenesh2_kg.5__2604__AT3G61380.1 3561 0.0
Ahg923032 jgi|Araly1|923032|scaffold_104313.1 1096 0.0
Ahg923031 jgi|Araly1|923031|scaffold_104312.1 145 2e-33
> Ahg486612 jgi|Araly1|486612|fgenesh2_kg.5__2604__AT3G61380.1
Length=2420
Score = 3561 bits (1928), Expect = 0.0
Identities = 2287/2453 (93%), Gaps = 54/2453 (2%)
Strand=Plus/Plus
Query 1 ATGGAGAGAAA-TTGTCGGAGAAATCTTGAAAGAGAAGGTA-TCAATGGTATAGGATGTG 58
||||||| ||| |||||||||||||||| |||||||||| | || |||||||||||||||
Sbjct 1 ATGGAGA-AAATTTGTCGGAGAAATCTTAAAAGAGAAGG-ATTCGATGGTATAGGATGTG 58
Query 59 TGTGGGTGTTCATTAGTCTCTTTGGATCTAACCAGAAACGTCTCTTGATGGATAACAAAC 118
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 59 TGTGGGTGTTCATAAGTCTCTTTGGATCTAACCAGAAACGTCTCTTGATGGATAACAAAC 118
Query 119 GTGGAAGCAAACGAGTTTCAGGTAATGAAATGAAGCAGATTACATGTTCTTGTGAGAGCT 178
||||||||||| || ||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 119 GTGGAAGCAAAAGACTTTCAGGTAATGAGATGAAGCAGATTACATGTTCTTGCGAGAGCT 178
Query 179 CTCATGAGAGTGTTGATGAGGAAGATATCCATGTTTCGGTCGCCGGTGATGAACATGTAG 238
||||||||||||||||||| | |||||| |||||||||| || ||||||||||||||||
Sbjct 179 CTCATGAGAGTGTTGATGA-G--GATATCGATGTTTCGGTTGCTGGTGATGAACATGTAG 235
Query 239 AGACTGAGGTTTGTAAGAGTCTAGTTGATGAATCTGAAGAGAAATTCAAAGAGATTATCA 298
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 236 AGACTGAGGTTTGTAAGAGTCTAGTTGATGAATCTGACGAGAAATTCAAAGAGATTATCA 295
Query 299 AACGGTTGATAGCTCAGAAAGAAGGAGAGATCCAAACCTGTAAAGACTTATTGGAGGCTT 358
|||| |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||
Sbjct 296 AACGTTTGATAGCTCAGAAAGAAGGAGAGGTTCAAACCTGTAAGGACTTATTGGAGGCTT 355
Query 359 TTCATGTTTTGGGTTCTGAAGAAGAAGAATCATTCCTCAAGAAGAAGCTTTCAAATGAAG 418
||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||
Sbjct 356 TTCATGTTTTGGGTTCT---GAAGAAGAATCATTCCTCAAGAAGAAGATTTCACATGAAG 412
Query 419 ATGCTCAAACCTTGGGAGATTCTAAGAGAGTAGAAGAAG--AA-AAGCCTGAAGTAGTAT 475
||| ||||||||||||||||||||||||||| ||||||| || |||| || ||||||||
Sbjct 413 ATGATCAAACCTTGGGAGATTCTAAGAGAGTTGAAGAAGACAACAAGCGTGGAGTAGTAT 472
Query 476 CGAAGCAAGAGGCGGTGGTGATACCGAAGAGGAAAGCTAACTTTTTCAGCAGGAAATGGA 535
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 473 CAAAGCAAGAGGCGGTGGTAATACCGAAGAGGAAAGCTAACTTTTTCAGCAGGAAATGGA 532
Query 536 AATCAGAAGAGAGGAGAAACAGATCTCAAGTTGCAAAAACAATTGTGGTTTTGAAACCTG 595
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 533 AATCAGATGAGAGGAGAAACAGATCTCAAGTTGCAAAAACTATTGTGGTTTTGAAACCTG 592
Query 596 GTCCAAATACTTTGGATGTTGATTCTTCAACTGG-ACTGCATTCTACTGCCAACAAGTCC 654
||||||||| ||||||||||||||||||| |||| || |||||||||| |||||||||
Sbjct 593 GTCCAAATAGTTTGGATGTTGATTCTTCATCTGGAAC-ACATTCTACTGGCAACAAGTCG 651
Query 655 AAAACCGGGAGAACATTTTCTCGCTTCCTTATCGGTTTAGTCAAGAGAAGACTACAATCT 714
|||||||||| || | |||||||||| |||||||||||| ||||| ||||||||||||||
Sbjct 652 AAAACCGGGAAAAAAATTTCTCGCTTTCTTATCGGTTTAATCAAGGGAAGACTACAATCT 711
Query 715 GCTGTTGGAAAGAAGTCATGTGATGTTTCTGTTGATAAGAGGAGCCAAAACTGTTCTACG 774
|||||| |||||||||||||||||||| ||| |||||||| |||||||||||||| || |
Sbjct 712 GCTGTTAGAAAGAAGTCATGTGATGTTCCTGCTGATAAGATGAGCCAAAACTGTTGTATG 771
Query 775 CAAGAAGAGATACAGAGTAAATCAGAGGAGAAGCATGATGTTTCGGATAAAGAAGAACCG 834
||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||
Sbjct 772 CAAGAAGAGATACAGAGTAAATC--A-GAGAAGC---ATGTTTCGGATAAAGAAGAACCG 825
Query 835 TTCTGTGACGAAAGAACGACCGAGGATGGTAAAGAGGAGACTATCTACTCAAGCGAAGAT 894
||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct 826 GTCTGTAACGAAAGAACGACCCAGGATGATAAAGAGGAGACTATCTACTCAAGCGAAGAT 885
Query 895 TCAAAGAAGATAATGTCTGGCTTATATATTGCAGCCAAGAAACACTTGTCTGAAATGCTT 954
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 886 TCAAAGAAGATTATGTCTGGCTTATACATTGCAGCCAAGAAACACTTGTCTGAAATGCTT 945
Query 955 GCAAATGGAGATATAGATGTGAATTTACCAGACAAGGAAGTGCCAAGAATCCTGGGGAAG 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 946 GCAAATGGAGATATAGATGTGAATTTACCAGACAAGGAAGTGCCAAGAATCCTGGGGAAG 1005
Query 1015 ATTCTTTCTCTCCCTGAGTTCTGTTCACCAGCAGACAGTCCTAGATTGATCCCGGCACAT 1074
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1006 ATTCTTTCTCTCCCTGAGTTCTGTTCACCAGCAGACAGTCCTATATTGATCCCGGCACAT 1065
Query 1075 GATTTGGTTAGTACTCTAAG---TC--AG---A-CAACTGAGCAACCAGAGATTCTACAA 1125
||||||||| ||| ||| || || || | |||||||| ||||||||||||| |
Sbjct 1066 GATTTGGTTTGTAATCTTAGCCCTCTAAGCCAACCAACTGAGAAACCAGAGATTCTGC-- 1123
Query 1126 ACACCAGAAACCAGTTCAGCTACAAATGATCTGATTGATGAAGATTCGGATAAAGACGAC 1185
| | | ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1124 A-A--TG----CAGTTCAGCTACAAATGATCTGACTGATGAAGATTCGGATAAAGACGAC 1176
Query 1186 GATACATTATTTACCATTGATGTCTCTGTTCCTAGAGACTATGGGAATGAAACTGAGAAT 1245
||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 1177 AATACATTGTTTACCATTGATGTCTCTGTTCCTAGAGTCTATGAGAATGAAACTGAGAAT 1236
Query 1246 ATAGACAATGATGAGGAGAGTGAGATAGATCCATTATCTGAAACTTGTAGCTCTTCCGTT 1305
|||||||| || ||| |||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 1237 ATAGACAAGGAAGAGAAGAGTGAGATAGATCCTTTATCTGAAACTTATAGCTCTTCCGTT 1296
Query 1306 TCCCGAGAAGTCGAAAATGTTGATGAAGATGTAGAAAAGGAAATGTTGAACCACCAAGCG 1365
||| || |||||||||||| |||||||||||||||| |||||||||| | ||||||||
Sbjct 1297 TCCGGACAAGTCGAAAATGCTGATGAAGATGTAGAAGAGGAAATGTT---CAACCAAGCG 1353
Query 1366 CATTCGCCGGCTTCTCCTCTAGAATCTCCAACAACTTGTTCAGTAAGGTTGACTGAATGC 1425
||||| ||| ||||||||| |||||||||| |||||| |||||| ||||||||||||| |
Sbjct 1354 CATTCACCGTCTTCTCCTCCAGAATCTCCACCAACTTCTTCAGTGAGGTTGACTGAATAC 1413
Query 1426 AAAGAAACTGCCACTGATGCGCAGGGAAAGTTAAGTCCAGTGTCTGTGCTCGAGACTTTG 1485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1414 AAAGAAACTGCCACTGATGCGCAGGGAAAGTTAAGTCCAGTGTCTGTGCTCGAGACTTTG 1473
Query 1486 TTCACAGATGATGACAGTAGCCCAACAACAAGCACAAGTTTCAGTTCAGCTGGAATGCGG 1545
|||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1474 TTCACAGATGATGAAAGTAGCCCAACAACAAGCACAAGTTTCAGTTCAGCTGAAATGCGG 1533
Query 1546 ATGCAACCACTCTGTATAAGATTCGATGAAGTTGATTCTCCAAAACCAGAGAAGGACAAC 1605
|||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct 1534 ATGCAACCACTCTGTATAAGATTCGATGAAGTTGGTTCTCCAAAACCAGAGAAAGACAAC 1593
Query 1606 AATGTCGAAGCAACCATAGATGACAAGGAATTGACACTTGCATACATTGAAGCCGTTGTG 1665
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1594 GATGTCGAAGCAAGCATAGATGACAAGGAATTGACACTTGCATACATTGAAGCCGTTGTG 1653
Query 1666 AAATCTGCA-GCCTTGAGCTGGGAAGAGCTTTTAACAAGGCCCTTTTACTCGGAACAGCT 1724
||||||||| | ||| |||||||||||||||||||| ||||| |||||||||||||| ||
Sbjct 1654 AAATCTGCATG-CTTAAGCTGGGAAGAGCTTTTAACTAGGCCATTTTACTCGGAACAACT 1712
Query 1725 TCTTGAGCTAGAACTAACAGATGGCATAGTTTTTTCTTCTACACAGCTCTGCGACGATAA 1784
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1713 TCTTGAGCTAGAACTAACAGATGACATAGTTTTTTCTTCTACACAGCTCTGCGACGATAA 1772
Query 1785 GAATCTCCTTTACGACTGTATCAATGAAGTTCTTATGGACTTCTGTTGGAATGAATTCAA 1844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1773 GAATCTCCTTTACGACTGTATCAATGAAGTTCTTATGGACTTCTGTTGGAATGAATTCAA 1832
Query 1845 TCCCGGGCCTTGGATTTCATTCGTGAAACCTGAGGTCCAGTTGATCTCAGACATGGAAAT 1904
||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||
Sbjct 1833 TCCCGGGCCTTGGATCTCATTCGTGAAACCTGAGGTCCAGCTAATCTCAGACATGGAAAT 1892
Query 1905 CGCAGCTAAAGTAGCACAAGAAGGAGTTTACTGGCATCTCCAACCTTTGCCTTTCCCTCA 1964
|||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 1893 CGCAGCTAAAGTGGCACAAGAAGGAGTTTACTGGCATCTCCTACCTTTGCCTTCCCCTCA 1952
Query 1965 CACTTTAGATCAGATAGTaaaaaaaGACATGGCTAGAACTGGAAGCTGGATGGATCTCCG 2024
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1953 CACTTTAGATCAGATAGTGAAAAAAGACATGGCTAGAACTGGAAGCTGGATGGATCTCCG 2012
Query 2025 GTTTG-AGATCGGTTGTCTAGGTTCCTATACAAGTGAAATGATCCTTGATGAGTTAGTAG 2083
||||| || ||||||| || ||||| ||||||||||||||||||||||||||||||||||
Sbjct 2013 GTTTGAAG-TCGGTTGCCTTGGTTCTTATACAAGTGAAATGATCCTTGATGAGTTAGTAG 2071
Query 2084 AAGAGATCATCATG-AGCTGCAGAGACATGGTTCAAGTTGAACCGATGCAGGAACC-CAG 2141
|||||||||||| | |||| ||||||||||||||||| ||||| |||||||| ||| |
Sbjct 2072 AAGAGATCATCA-GAAGCTTCAGAGACATGGTTCAAGCTGAACTGATGCAGG-ACCAAAA 2129
Query 2142 CAGCGACAACCTGTGATGAGGCTCTTTGTTTTAACCTTTTGTCTATCCTGTACAGTTTCA 2201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2130 CAGCGACAACCTGTGATGAGGCTCTTTGTTTTAACCTTTTGTCTATCCTGTACAGTTTCA 2189
Query 2202 TTGCCACTGCCATGGTCAAATCTCTTGACATTCTTGTGCAGTGGCACAACCACAGCTTTT 2261
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct 2190 TTGCCACTGCCATGGTCAAATCTCTTGACCTTCTCGTGCAGTGGCACAACCACAGCTTTT 2249
Query 2262 T-TAACATAAACAAAGACTTCAGAATCTCTTATATTGTTTCTTTCACTTCCATACTCTGT 2320
| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 2250 TATAACATAAACAAAGACTTCAGAATCTCTTACCTTGTTTCTTTCACTCCCATACTCTGT 2309
Query 2321 TTTTGCTTTCCAGTGGCATCTGTAGTTTTACTCGGCCAAGAGAGTTGTGCATGAGTTATA 2380
||||||||||||||||| |||||||||| |||| |||||||||||| |||||||||||||
Sbjct 2310 TTTTGCTTTCCAGTGGCGTCTGTAGTTT-ACTCAGCCAAGAGAGTTTTGCATGAGTTATA 2368
Query 2381 ACTATAGAGTGGTA-TAACATGAGGCTTGAACTTAAATAAGACAAAGATGATG 2432
||||||||||| || ||||| ||||||||||||||||||||||||||||||||
Sbjct 2369 ACTATAGAGTG-TAATAACAGGAGGCTTGAACTTAAATAAGACAAAGATGATG 2420
> Ahg923032 jgi|Araly1|923032|scaffold_104313.1
Length=1297
Score = 1096 bits (593), Expect = 0.0
Identities = 641/665 (96%), Gaps = 0/665 (0%)
Strand=Plus/Plus
Query 695 TCAAGAGAAGACTACAATCTGCTGTTGGAAAGAAGTCATGTGATGTTTCTGTTGATAAGA 754
||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 568 TCAAGAGAAGACTCCAATCTGCTGTTGGAAAGAAGTCATGTGATGTTTCTGTTAATAAGA 627
Query 755 GGAGCCAAAACTGTTCTACGCAAGAAGAGATACAGAGTAAATCAGAGGAGAAGCATGATG 814
||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||
Sbjct 628 GGAGCCAAAACTGTTATATGCAAGAAGAGATACAGAGCAAATCAGAGGAGAAGCATGATG 687
Query 815 TTTCGGATAAAGAAGAACCGTTCTGTGACGAAAGAACGACCGAGGATGGTAAAGAGGAGA 874
|||||||||||||||||||||||||| ||||||||||| | |||||||||||||| ||||
Sbjct 688 TTTCGGATAAAGAAGAACCGTTCTGTAACGAAAGAACGTCTGAGGATGGTAAAGAAGAGA 747
Query 875 CTATCTACTCAAGCGAAGATTCAAAGAAGATAATGTCTGGCTTATATATTGCAGCCAAGA 934
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 748 CTATCTACTCAAGCGAAGATTCAAAGAAGATTATGTCTGGCTTATATATTGCAGCCAAGA 807
Query 935 AACACTTGTCTGAAATGCTTGCAAATGGAGATATAGATGTGAATTTACCAGACAAGGAAG 994
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 808 AGCACTTGTCTGAAATGCTTGCAAAAGGAGATATAGATGTGAATTTACCAGACAAGGAAG 867
Query 995 TGCCAAGAATCCTGGGGAAGATTCTTTCTCTCCCTGAGTTCTGTTCACCAGCAGACAGTC 1054
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 868 TGCCAAGAATCCTGGGGAAGATTCTTTATCTCCATGAGTTCTGTTCACCAGCAGACAGTC 927
Query 1055 CTAGATTGATCCCGGCACATGATTTGGTTAGTACTCTAAGTCAGACAACTGAGCAACCAG 1114
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 928 CTAGATTGATCCCGGCACATAATTTGGTTAGTACTCTAAGTCAGACAACTGAGAAACCAG 987
Query 1115 AGATTCTACAAACACCAGAAACCAGTTCAGCTACAAATGATCTGATTGATGAAGATTCGG 1174
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 988 AGATTCTGCAAACACCAGAAACCAGTTCAGCTACAAATGATCTGATTGATGAAGATTCGG 1047
Query 1175 ATAAAGACGACGATACATTATTTACCATTGATGTCTCTGTTCCTAGAGACTATGGGAATG 1234
||||||| || |||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 1048 ATAAAGAAGATGATACATTGTCTACCATTGATGTCTCTGTTCCTAGAGACTATGGGAATG 1107
Query 1235 AAACTGAGAATATAGACAATGATGAGGAGAGTGAGATAGATCCATTATCTGAAACTTGTA 1294
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 1108 AAACTGAGAATATAGACAAGGAAGAGGAGAGTGAGATAGATCCATTATCTGAAACTTGTA 1167
Query 1295 GCTCTTCCGTTTCCCGAGAAGTCGAAAATGTTGATGAAGATGTAGAAAAGGAAATGTTGA 1354
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1168 GCTCTTCCGTTTCCCGAGAAGTTGAAAATGTTGATGAAGATGTAGAAAAGGAAATGTTGA 1227
Query 1355 ACCAC 1359
|||||
Sbjct 1228 ACCAC 1232
Score = 510 bits (276), Expect = 2e-143
Identities = 312/329 (95%), Gaps = 3/329 (1%)
Strand=Plus/Plus
Query 314 AGAAAGAAGGAGAGATCCAAACCTGTAAAGACTTATTGGAGGCTTTTCATGTTTTGGGTT 373
|||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 241 AGAAAGAAGGAGAGATTCAAACTTGTAAGGACTTATTGGAGGCTTTTCATGTTTTGGGTT 300
Query 374 CTGAAGAAGAAGAATCATTCCTCAAGAAGAAGCTTTCAAATGAAGATGCTCAAACCTTGG 433
|| ||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||
Sbjct 301 CT---GAAGAAGAATCATTCCTCAAGAAGAAGCTTTCACATGAAGATGTTCAAAGGTTGG 357
Query 434 GAGATTCTAAGAGAGTAGAAGAAGAAAAGCCTGAAGTAGTATCGAAGCAAGAGGCGGTGG 493
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 358 GAGATTCTAAGAGAGTAGAAGAAGAAAAGCCTGAAGTTGTCTCGAAGCAAGAGGCGGTGG 417
Query 494 TGATACCGAAGAGGAAAGCTAACTTTTTCAGCAGGAAATGGAAATCAGAAGAGAGGAGAA 553
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 418 TAATACCGAAGAGGAAAGCTAACTTTTTCAGCAGGAAATGGAAATCAGAAGAGAGGAGAA 477
Query 554 ACAGATCTCAAGTTGCAAAAACAATTGTGGTTTTGAAACCTGGTCCAAATACTTTGGATG 613
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct 478 ACAGATCTCAAGTTGCGAAAACAATTGTGGTTTTGAAACCTGGTTCAAATACTTTGGATG 537
Query 614 TTGATTCTTCAACTGGACTGCATTCTACT 642
||||||||||| ||||| |||||||||||
Sbjct 538 TTGATTCTTCATCTGGAGTGCATTCTACT 566
Score = 195 bits (105), Expect = 2e-48
Identities = 112/115 (97%), Gaps = 1/115 (1%)
Strand=Plus/Plus
Query 133 GTT-TCAGGTAATGAAATGAAGCAGATTACATGTTCTTGTGAGAGCTCTCATGAGAGTGT 191
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 128 GTTATCCGGTAATGAAATGAAGCAGATTACATGTTCTTGTGAGAGCTCTCATGAGAGTGT 187
Query 192 TGATGAGGAAGATATCCATGTTTCGGTCGCCGGTGATGAACATGTAGAGACTGAG 246
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 188 TGATGAGGAAGATATCCATGTTTCGGTCGCTGGTGATGAACATGTAGAGACTGAG 242
> Ahg923031 jgi|Araly1|923031|scaffold_104312.1
Length=232
Score = 145 bits (78), Expect = 2e-33
Identities = 92/99 (93%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 1968 TTTAGATCAGATAGTaaaaaaaGACATGGCTAGAACTGGAAGCTGGATGGATCTCCGGTT 2027
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TTTAGATCAGATAGTAAGAAAAGACATGGCTAGAACTGGAAGCTGGATGGATCTCCGGTT 60
Query 2028 TGAGATCGGTTGTCTAGGTTCCTATACAAGTGAAATGAT 2066
|| |||||||| || |||| |||||||||||||||||
Sbjct 61 CGAAATCGGTTGCCTTTGTTCTTATACAAGTGAAATGAT 99
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 92102212410
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5