BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G61420.1
Length=2129
Score E
Sequences producing significant alignments: (Bits) Value
Ahg924090 jgi|Araly1|924090|scaffold_105371.1 2239 0.0
Ahg486617 jgi|Araly1|486617|fgenesh2_kg.5__2609__AT3G61420.1 2025 0.0
Ahg916046 jgi|Araly1|916046|Al_scaffold_0008_797 1208 0.0
> Ahg924090 jgi|Araly1|924090|scaffold_105371.1
Length=1820
Score = 2239 bits (1212), Expect = 0.0
Identities = 1574/1748 (90%), Gaps = 27/1748 (2%)
Strand=Plus/Plus
Query 193 CAA-TGGAGAAGCGAGTCAAATACAAGAGCTTTGTGAAGGATCCAGGAACTCTTGGATCC 251
||| ||||||||||||||||||||||||||| ||| |||||||| ||||||| |||||
Sbjct 33 CAAGTGGAGAAGCGAGTCAAATACAAGAGCTCTGTCAAGGATCCTGGAACTCCTGGATTT 92
Query 252 CTC-GAATTAAGTGAAGTGATGCTGCTCTTTGTCCCAAATGATCCTAAATCAGATTTGAA 310
||| ||||| || |||| |||| ||||||| ||||| |||||||| |||||||||| ||
Sbjct 93 CTCAGAATT-AGAGAAGGGATGTTGCTCTTCGTCCCTAATGATCCCAAATCAGATTCAAA 151
Query 311 GCTTAAAGTTCAGACTCACAACATCAAAAGTCAGAAATATACCAAAGAAGGATCAAATAA 370
||| ||||| | || || |||||||||||||| ||| |||| |||||||||||||||||
Sbjct 152 GCTCAAAGTGCTCACCCAGAACATCAAAAGTCAAAAAAATACAAAAGAAGGATCAAATAA 211
Query 371 ACCTCCTTGGCTCAATCTGACCAGCAAGCAGGGAAGGAGTCATATCTTTGAGTTTGAAAA 430
||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| ||
Sbjct 212 ACCTCCTTGGCTCAATCTGACCAACAAGCTGGGAAAGAGTCATATCTTTGAGTTTGAGAA 271
Query 431 TTATCCTGACATGCATGCTTGTCGTGATTTCATCACTAAGGCCCTTGCTAAATGTGAAGA 490
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 272 TTATCCTGACATGCATGCTTGCCGTGATTTCATCACTAATGCCCTTGCTAAATGTGAAGA 331
Query 491 GGAGCCTAATAAACT-AGTTGTCTTGACACCTGCTGAACAACTTAGTATGGCA-GAATTT 548
||||||||||||| | ||||||| |||| || | || ||||| ||||| | |||||
Sbjct 332 GGAGCCTAATAAA-TCCGTTGTCTCGACATCTTCCGAGCAACTCAGTAT-TAAGGAATTG 389
Query 549 GAGCTACGCTTCAAGCTTCTTCGAGAAAATAGTGAGTTGCAGAAATTGCATAAGCAATTT 608
|||||||||||||||||||| |||||||||||||| |||||| ||| ||||||||||||
Sbjct 390 GAGCTACGCTTCAAGCTTCTGAGAGAAAATAGTGAGCTGCAGAGATTACATAAGCAATTT 449
Query 609 GTGGAAAGTAAAGTCCTGACGGAAGACGAATTCTGGTCTACGAGGAAGAAATTACTTGGT 668
|||||||||||||| ||| ||||||| ||||||||| |||| || |||||||||||||||
Sbjct 450 GTGGAAAGTAAAGTACTGGCGGAAGATGAATTCTGGGCTACAAGAAAGAAATTACTTGGT 509
Query 669 AAAGATTCCATTAGAAAGTCAAAACAACAGATGGGGCTCAAAAGCATGATGGTTTCAGGC 728
||||||||||| |||||||||||||| ||| | ||||| || |||||||||||||| ||
Sbjct 510 AAAGATTCCATCAGAAAGTCAAAACAGCAGGTCGGGCTTAAGAGCATGATGGTTTCTGGT 569
Query 729 ATCAAACCGTCTACTGATGGCCGGACTAATAGGGTGACGTTTAACTTAACGTCTGAGATA 788
|||||||| ||||||||||| ||||||||||| |||||||||||||| || ||||||||
Sbjct 570 ATCAAACCATCTACTGATGGGCGGACTAATAGAGTGACGTTTAACTTGACACCTGAGATA 629
Query 789 ATTTTTCAGATTTTTGCTGAGAAGCCGGCTGTTCGCCAGGCATTCATAAATTATGTTCCG 848
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 630 ATTTTTCAGATTTTTGCTGAGAAGCCGGCTGTTCGGCAGGCATTCATCAATTATGTTCC- 688
Query 849 AA-AAAGATGACAGAAAAGGACTTTTGGACAAAATATTTTAGAGCAGAATATCTTTACAG 907
|| |||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||
Sbjct 689 AAGTAAGATGACAGAAAAAGACTTCTGGACAAAATATTTTAGAGCGGAATATCTCTACAG 748
Query 908 CACAAAAAATACAGCAGTAGCTGCAGCAGAAGCTGCTGAGGATGAGGAACTCGCTGTCTT 967
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 749 CACAAAAAATACAGCAGTAGCTGCAGCAGAAGCTGCTGAGGACGAGGAACTCGCTGTCTT 808
Query 968 TCTGAAGCCTGACGAGATATTGGCTCAGGAAGCTCGTCAAAAGATGAGACGGGTTGATCC 1027
|||||||||||| ||||||||||||| |||| ||||||||||||| ||||||||||||||
Sbjct 809 TCTGAAGCCTGATGAGATATTGGCTCGGGAAACTCGTCAAAAGATTAGACGGGTTGATCC 868
Query 1028 AACTCTTGACATGGACGCTGACGAGGGAGATGACTACACCCATCTTATGGACCACGGGAT 1087
||||||||||||||| |||||| ||||||| |||||||| ||||||||||||||||| ||
Sbjct 869 AACTCTTGACATGGAGGCTGACCAGGGAGACGACTACACTCATCTTATGGACCACGGTAT 928
Query 1088 CCAGCGCGATGGCACCAATG-ACATTATTGAACCACAGAATGACCAGCTTAAGAGG-TCA 1145
|||||| |||||||||| || | || |||||||||||||||| ||| ||| || | |||
Sbjct 929 CCAGCGTGATGGCACCA-TGGATGTTGTTGAACCACAGAATGATCAGTTTA-GACGATCA 986
Query 1146 CTTTTACAAGATCTTAATCGTCATGCTGCTGTTGTATTGGAAGGAAGATGCATCAATGTT 1205
||||| |||||||||||||||||||||||||||||||| ||||| ||| |||| |||||
Sbjct 987 CTTTTGCAAGATCTTAATCGTCATGCTGCTGTTGTATTAGAAGGCAGAAGCATTGATGTT 1046
Query 1206 CAGTCTGAAGATACGAGAATTGTTGCAGAGGCTCTCACACGGGCGAAACAAGTAAGCAAA 1265
|||| |||||||| || ||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1047 GAGTCAGAAGATACAAGGATTGTTGCAGAGGCTCTCACACGGGTGAAACAAGTAAGCAAA 1106
Query 1266 GCTGATGGTGAAATCACCAAGGACGCTAATCAGGAGAGGTTGGAGAGAATGTCCCG-T-G 1323
|||||||| |||| ||||||||||||||||| |||||| ||||||||||||||||| | |
Sbjct 1107 GCTGATGGCGAAACCACCAAGGACGCTAATCTGGAGAGATTGGAGAGAATGTCCCGGTTG 1166
Query 1324 CAACAGAAATGGAGGATCTTCAAGCACCACAAAACTTCCCATTAGCACCACTCTCTATCA 1383
||| ||||||||||||||||||||||||||||||||| ||||| || || |||||||
Sbjct 1167 G--CAGGAATGGAGGATCTTCAAGCACCACAAAACTTCCCGTTAGCGCCGCTTTCTATCA 1224
Query 1384 AGGACCCTCGTGATTACTTTGAATCTCAACAAGGAAACATCCTCAGTGAACCCAGAGGAG 1443
|||| ||||||||||||||||||||||||||||||||| |||||| || |||||||||||
Sbjct 1225 AGGATCCTCGTGATTACTTTGAATCTCAACAAGGAAACGTCCTCAATGTACCCAGAGGAG 1284
Query 1444 CAAAGGCG-TCAAAAAGAAATGTCCATGAAGCTTATGGATTACTAAAAGAATCCATTTTG 1502
|||||| | | || || |||||||||||||||||||||||| |||||||||||||||||
Sbjct 1285 CAAAGG-GATTGAAGAGGAATGTCCATGAAGCTTATGGATTATTAAAAGAATCCATTTTG 1343
Query 1503 GTGATTAGAA-TGACGGGATTAAGTGATCCGTTGATTAAACCTGAAGTTTCCTTTGAGGT 1561
| ||||||| | || |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1344 GAGATTAGAGCT-ACAGGATTAAGTGATCCGTTGATTAGGCCTGAAGTTTCCTTTGAGGT 1402
Query 1562 TTTCAGTTCGTTGACCCGAACTATCTCAACTGCCAAAAATATTCTCGGGAAGAACCCGCA 1621
|||||||||||| ||||||||||||||||| |||||||||||| | ||||||||||| |
Sbjct 1403 TTTCAGTTCGTTAACCCGAACTATCTCAACGGCCAAAAATATTATTGGGAAGAACCCACG 1462
Query 1622 AGAGAGCTTTCTGGACAGATTACCAAAGTCCACTAAGGATGAAGTTATACATCACTGGAC 1681
|||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||
Sbjct 1463 AGAGAGCTTTCTGGACAGATTACCAAAGTCCACTAAGGATGAAGTTCTACACCATTGGAC 1522
Query 1682 ATCAATACAAGAATTAGTGAGACATTTTTGGTCATCTTACCCAATAACAACGACATATCT 1741
|||||||||||||||| |||||||||||||||||||||| || |||||||| ||||||||
Sbjct 1523 ATCAATACAAGAATTACTGAGACATTTTTGGTCATCTTATCCGATAACAACCACATATCT 1582
Query 1742 T-AGTACCAAGGTTGGTAAACTGAAGGATGCAATGTCCAATACTTATTCACTACTCGATG 1800
| | |||||||||||||||||||||||||||||||||||| ||||||||| |||||| |
Sbjct 1583 TCA-TACCAAGGTTGGTAAACTGAAGGATGCAATGTCCAACACTTATTCAAAACTCGAGG 1641
Query 1801 CAATGAAACAGTCGGTGCAGTCTGATCTCCGGCATCAAGTTTC-CTTACTAGTTCGTCCA 1859
|||||||| |||||||||| ||||||||||||||||| ||||| || ||| |||||||||
Sbjct 1642 CAATGAAAGAGTCGGTGCAATCTGATCTCCGGCATCAGGTTTCTCT-ACTGGTTCGTCCA 1700
Query 1860 ATGCAACAGGCTCTTGATGCTGCGTTCCAACACTACGAATCGGA-CTTGCAGAGAAGAAC 1918
||||||||||||||||| ||||||||||||||||||||| |||| || ||||||||||||
Sbjct 1701 ATGCAACAGGCTCTTGACGCTGCGTTCCAACACTACGAAGCGGATCT-GCAGAGAAGAAC 1759
Query 1919 CGCTAAGA 1926
|||||||
Sbjct 1760 AGCTAAGA 1767
> Ahg486617 jgi|Araly1|486617|fgenesh2_kg.5__2609__AT3G61420.1
Length=1584
Score = 2025 bits (1096), Expect = 0.0
Identities = 1312/1409 (93%), Gaps = 43/1409 (3%)
Strand=Plus/Plus
Query 270 ATGCTGCTCTTTGTCCCAAATGATCCTAAATCAGATTTGAAGCTTAAAGTTCAGACTCAC 329
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTTGCTTTTTGTCCCAAATGATCCTAAATCAGATTTGAAGCTTAAAGTTCAGACTCAC 60
Query 330 AACATCAAAAGTCAGAAATATACCAAAGAAGGATCAAATAAACCTCCTTGGCTCAATCTG 389
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 61 AACATCAAAAGTCAGAAATATACCAAACAAGGATCAAATAAACCTCCTTGGCTCAATCTG 120
Query 390 ACCAGCAAGCAGGGAAGGAGTCATATCTTTGAGTTTGAAAATTATCCTGACATGCATGCT 449
|||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 121 ACCAATAAGCAGGGAAGGAGTCATATCTTTGAGTTTGAAAATTATCCCGACATGCATGCT 180
Query 450 TGTCGTGATTTCATCACTAAGGCCCTTGCTAAATGTGAAGAGGAGCCTAATAAA-CTAGT 508
||||| |||||||||||||||||||||||||||||||| |||||| |||||||| | |||
Sbjct 181 TGTCGAGATTTCATCACTAAGGCCCTTGCTAAATGTGATGAGGAGTCTAATAAATC-AGT 239
Query 509 TGTCT-TGACACCTGCTGAACAACTTAGTATGGCAGAATTTGAGCTACGCTTCAAGCTTC 567
||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 240 TGTCTCT-ACACCTGCTGAGCAACTTAGTATGGCAGAATTTGAGCTACGCTTCAAGCTTC 298
Query 568 TTCGAGAAAATAGTGAGTTGCAGAAATTGCATAAGCAATTTGTGGAAAGTAAAGTCCTGA 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 299 TTCGAGAAAATAGTGAGTTGCAGAAATTGCATAAGCAATTTGTGGAAAGTAAAGTCCTGA 358
Query 628 CGGAAGACGAATTCTGGTCTACGAGGAAGAAATTACTTGGTAAAGATTCCATTAGAAAGT 687
|||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct 359 CGGAAGACGAATTCTGGTCTACAAGGAAGAAATTACTTGGTAAATATTCCATTAGAAAGT 418
Query 688 CAAAACAACAGATGGGGCTCAAAAGCATGATGGTTTCAGGCATCAAACCGTCTACTGATG 747
||||||||||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||
Sbjct 419 CAAAACAACAGATGGGGCTTAAAGGCATGATGGTTTCAGGCATCAAACCATCTTCTGATG 478
Query 748 GCCGGACTAATAGGGTGACGTTTAACTTAACGTCTGAGATAATTTTTCAGATTTTTGCTG 807
| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 479 GGCGGACTAATCGGGTGACGTTTACCTTAACGTCTGAGATAATTTTTCAGATTTTTGCTG 538
Query 808 AGAAGCCGGCTGTTCGCCAGGCATTCATAAATTATGTTCCGAAAAAGATGACAGAAAAGG 867
||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||
Sbjct 539 AGAAGCCGGCTGTCCGGCAGGCATTCATAGATTATGTTCCGAAAAAGATGACAGAAAAGG 598
Query 868 ACTTTTGGACAAAATATTTTAGAGCAGAATATCTTTACAGCACAAAAAATACAGCAGTAG 927
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 599 ACTTCTGGACAAAATATTTTAGAGCAGAATATCTTTACAGCACAAAAAATACAGCAG-A- 656
Query 928 CTGCAGCAGAAGCTGCTGAGGATGAGGAACTCGCTGTCTTTCTGAAGCCTGACGAGATAT 987
||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 657 ----AGC------TGCTGAGGATGAGGAACTCGCTGTCTTTCTGAAGCCTGACGAGATAT 706
Query 988 TGGCTCAGGAAGCTCGTCAAAAGATGAGACGGGTTGATCCAACTCTTGACATGGACGCTG 1047
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 707 TGGCTCGGGAAGCTCGTCAAAAGATGAGACGGGTTGATCCAACTCTTGACATGGACGCTG 766
Query 1048 ACGAGGGAGATGACTACACCCATCTTATGGACCACGGGATCCAGCGCGATGGCACCAATG 1107
|| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 767 ACCAGGGAGATGACTACACTCATCTTATGGACCATGGGATCCAGCGCGATGGCACCAATG 826
Query 1108 ACATTATTGAACCACAGAATGACCAGCTTAAGAGGTCACTTTTACAAGATCTTAATCGTC 1167
|| | ||||||||||||||||||||| || ||||||||||||||||||||||||||| |
Sbjct 827 ACGCTGTTGAACCACAGAATGACCAGCATAGGAGGTCACTTTTACAAGATCTTAATCGCC 886
Query 1168 ATGCTGCTGTTGTATTGGAAGGAAGATGCATC--A-ATGTTCAGTCTGAAGATACGAGAA 1224
|||||||||||||||||||||||||||||||| | ||||| |||| ||||| ||||| |
Sbjct 887 ATGCTGCTGTTGTATTGGAAGGAAGATGCATCGTAGATGTTGAGTCAGAAGAGACGAGGA 946
Query 1225 TTGTTGCAGAGGCTCTCACACGGGCGAAACAAGTAAGCAAAGCTGATGGTGAAATCACCA 1284
|||||||||||||||||||||||||||||||||||||||||||| | | | | |
Sbjct 947 TTGTTGCAGAGGCTCTCACACGGGCGAAACAAGTAAGCAAAGCT-A-----A---C-C-A 995
Query 1285 AGGACGCTAATCAGGAGAGGTTGGAGAGAATGTCCCGTGCAACAGAAATGGAGGATCTTC 1344
||| | | || ||||||||||||||||||||| |||| |||||||||||||
Sbjct 996 -GGA-G--A----GG-----TTGGAGAGAATGTCCCGTGCAGCAGAGATGGAGGATCTTC 1042
Query 1345 AAGCACCACAAAACTTCCCATTAGCACCACTCTCTATCAAGGACCCTCGTGATTACTTTG 1404
|||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||
Sbjct 1043 AAGCACCACAAAACTTCCCACTAGCCCCCCTCTCTATCAAGGACCCTCGTGATTACTTTG 1102
Query 1405 AATCTCAACAAGGAAACATCCTCAGTGAACCCAGAGGAGCAAAGGCGTCAAAAAGAAATG 1464
||||||||||||||||| |||||||||||||||||||||||| ||| ||||| |||||||
Sbjct 1103 AATCTCAACAAGGAAACGTCCTCAGTGAACCCAGAGGAGCAAGGGCATCAAAGAGAAATG 1162
Query 1465 TCCATGAAGCTTATGGATTACTAAAAGAATCCATTTTGGTGATTAGAATGACGGGATTAA 1524
| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1163 TATATGAAGCTTATGGATTACTAAAAGAATCCATTTTGGAGATTAGAATGACGGGATTAA 1222
Query 1525 GTGATCCGTTGATTAAACCTGAAGTTTCCTTTGAGGTTTTCAGTTCGTTGACCCGAACTA 1584
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1223 GTGATCCGTTGGTTAAACCTGAAGTTTCCTTTGAGGTTTTCAGTTCGTTGACCCGAACTA 1282
Query 1585 TCTCAACTGCCAAAAATATTCTCGGGAAGAACCCGCAAGAGAGCTTTCTGGACAGATTAC 1644
|||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||
Sbjct 1283 TCTCAACTGCCAAAAATATTATCGGGAAGAACCCACGGGAGAGCTTTCTGGACAGATTAC 1342
Query 1645 CAAAGTCCACTAAGGATGAAGTTATACAT 1673
|||||||||||||||||||||||||||||
Sbjct 1343 CAAAGTCCACTAAGGATGAAGTTATACAT 1371
Score = 226 bits (122), Expect = 6e-58
Identities = 130/134 (97%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 1800 GCAATGAAACAGTCGGTGCAGTCTGATCTCCGGCATCAAGTTTCCTTACTAGTTCGTCCA 1859
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||
Sbjct 1450 GCAATGAAACAGTCGGTGCAGTCTGATCTCCGGCATCAGGTTTCGTTACTAGTTCGTTCA 1509
Query 1860 ATGCAACAGGCTCTTGATGCTGCGTTCCAACACTACGAATCGGACTTGCAGAGAAGAACC 1919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1510 ATGCAACAGGCTCTTGATGCTGCGTTCCAACACTACGAATCGGACTTGCAGAGAAGAACC 1569
Query 1920 GCTAAGATTACATA 1933
||||||||| ||||
Sbjct 1570 GCTAAGATTGCATA 1583
> Ahg916046 jgi|Araly1|916046|Al_scaffold_0008_797
Length=852
Score = 1208 bits (654), Expect = 0.0
Identities = 700/723 (97%), Gaps = 0/723 (0%)
Strand=Plus/Plus
Query 1077 GACCACGGGATCCAGCGCGATGGCACCAATGACATTATTGAACCACAGAATGACCAGCTT 1136
||||| |||||||||||| |||||||||||||| || ||||||||| ||| |||||||||
Sbjct 1 GACCATGGGATCCAGCGCTATGGCACCAATGACGTTGTTGAACCACTGAACGACCAGCTT 60
Query 1137 AAGAGGTCACTTTTACAAGATCTTAATCGTCATGCTGCTGTTGTATTGGAAGGAAGATGC 1196
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 AGGAGGTCACTTTTACAAGATCTTAATCGTCATGCTGCTGTTGTATTGGAAGGAAGATGC 120
Query 1197 ATCAATGTTCAGTCTGAAGATACGAGAATTGTTGCAGAGGCTCTCACACGGGCGAAACAA 1256
||| ||||| |||| | ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 121 ATCGATGTTGAGTCAGGAGATACGAGAATTGTTGCAGAGGCTCTCACACGGGTGAAACAA 180
Query 1257 GTAAGCAAAGCTGATGGTGAAATCACCAAGGACGCTAATCAGGAGAGGTTGGAGAGAATG 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 GTAAGCAAAGCTGATGGTGAAATCACCAAGGACGCTAATCAGGAGAGGTTGGAGAGAATG 240
Query 1317 TCCCGTGCAACAGAAATGGAGGATCTTCAAGCACCACAAAACTTCCCATTAGCACCACTC 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 TCCCGTGCAACAGAAATGGAGGATCTTCAAGCACCACAAAACTTCCCATTAGCACCACTC 300
Query 1377 TCTATCAAGGACCCTCGTGATTACTTTGAATCTCAACAAGGAAACATCCTCAGTGAACCC 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 TCTATCAAGGACCCTCGTGATTACTTTGAATCTCAACAAGGAAACATCCTCAGTGAACCC 360
Query 1437 AGAGGAGCAAAGGCGTCAAAAAGAAATGTCCATGAAGCTTATGGATTACTAAAAGAATCC 1496
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 361 AGAGGAGCAAAGGCGTCAAAGAGAAATGTCCATGAAGCTTATGGATTACTAAAAGAATCC 420
Query 1497 ATTTTGGTGATTAGAATGACGGGATTAAGTGATCCGTTGATTAAACCTGAAGTTTCCTTT 1556
||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 421 ATTTTGGAGAATAGAATGACGGGATTAAGTGATCCTTTGATTAAACCTGAAGTTTCCTTT 480
Query 1557 GAGGTTTTCAGTTCGTTGACCCGAACTATCTCAACTGCCAAAAATATTCTCGGGAAGAAC 1616
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 481 GAGGTTTTCAGTTCGTTGACCCGAACTATCTCAACTGCCAAAAATATTGTTGGGAAGAAC 540
Query 1617 CCGCAAGAGAGCTTTCTGGACAGATTACCAAAGTCCACTAAGGATGAAGTTATACATCAC 1676
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 CCGCGAGAGAGCTTTCTGGACAGATTACCAAAGTCCACTAAGGATGAAGTTATACATCAC 600
Query 1677 TGGACATCAATACAAGAATTAGTGAGACATTTTTGGTCATCTTACCCAATAACAACGACA 1736
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 601 TGGACATCAATACAGGAATTACTGAGACATTTTTGGTCATCTTACCCAATAACAACGACA 660
Query 1737 TATCTTAGTACCAAGGTTGGTAAACTGAAGGATGCAATGTCCAATACTTATTCACTACTC 1796
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 661 TATCTTAATACCAAGGTTGCTAAACTGAAGGATGCAATGTCCAATACTTATTCACTACTC 720
Query 1797 GAT 1799
|||
Sbjct 721 GAT 723
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80103785235
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5