BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G62090.2
Length=1805
Score E
Sequences producing significant alignments: (Bits) Value
Ahg939299 jgi|Araly1|939299|scaffold_503490.1 1683 0.0
Ahg939289 jgi|Araly1|939289|scaffold_503480.1 1445 0.0
Ahg348075 jgi|Araly1|348075|fgenesh1_pg.C_scaffold_5001467 555 5e-157
Ahg486715 jgi|Araly1|486715|fgenesh2_kg.5__2707__AT3G62080.2 355 6e-97
Ahg485327 jgi|Araly1|485327|fgenesh2_kg.5__1319__AT3G62080.2 228 1e-58
> Ahg939299 jgi|Araly1|939299|scaffold_503490.1
Length=1150
Score = 1683 bits (911), Expect = 0.0
Identities = 1075/1151 (93%), Gaps = 23/1151 (2%)
Strand=Plus/Plus
Query 195 GGTTAAGCGATCAAGAGTATATGGAGCTTGTGTTTGAGAATGGCCAGATTCTTGCAAAGG 254
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GGTTAAACGATCAAGAGTATATGGAGCTTGTGTTTGAGAATGGCCAGATTCTTGCAAAGG 60
Query 255 GCCAAAGATCCAACGTTTCTCTGCATAATCAACGTACCAAATCGATCATGGATTTGTATG 314
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 61 GCCAAAGATCCAACGTTCCTCTGCAGAATCAACGTACCAAATCGATCATGGATTTGTATG 120
Query 315 AGGCAGAGTATAACGAGGATTTCATGAAGAGTATCATCCA------TGGTGGTGGTGGTG 368
|||| |||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 121 AGGCCGAGTATAACGAGGACTTCATGAAGAGTATCATCCATGGTGGTGGTGGTGGTGGTG 180
Query 369 CCATCACA-AATCTCGGGGACACGCAGGTTGTTCCACAAAGTCATGTTGCTGCTGCCCAT 427
||| || | |||||||| ||||| ||||||||||||||||||||||||| | |||| |||
Sbjct 181 CCAACA-AGAATCTCGGAGACACACAGGTTGTTCCACAAAGTCATGTTGTTCCTGCTCAT 239
Query 428 GAAACAAACATGTTGGAAAGCAATAAACATGTTGACGATT---C------TGAGACTTTG 478
|||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 240 GAAACAAACATGTTGGAAAGCAATAAACATGTTGACGATTCCACTTTGATTGAGACTTTG 299
Query 479 AAAGCTTCTTCATCAAAGAGGATGATGGTTGATTATCATAACCGAAAGAAGATCAAGTTT 538
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 300 AAAGCTTCTTCATCAAAGAGGATGATGGTTGATTATGATAACCGAAAGAAGATCAAGTTT 359
Query 539 ATACCTCCTGATGAGCAATCCGTGGTTGCTGATAGG-TCGTTCAAATTGGGCTTTGACAC 597
|||||||||||||||||||| ||||||||| | ||| | ||| ||| ||| ||| ||||
Sbjct 360 ATACCTCCTGATGAGCAATCTGTGGTTGCTAAAAGGATGGTT-GAATCGGGATTTAACAC 418
Query 598 TTCCTCCGTAGGTTTCACTGAAGACAGTGAAGGATCGATGTATCTAAGCAGTAGTCTAGA 657
|||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 419 TTCCTCCGCAGGTTTCACTGAAGACAGTGAAGGATCGATGTATCTAAGCAGCAGTCTAGA 478
Query 658 TGACGAGTCAGATGATGCGAGGCCACAAGTTCCTGCAAGAACAAGAAAAGCTTTGGTCAA 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 479 TGACGAGTCAGATGATGCGAGGCCACAAGTTCCTGCAAGAACAAGAAAAGCTTTGGTCAA 538
Query 718 AAGAAAACGAAATGCAGAAGCGTATAATTCACCTGAGAGAAATCAAAGAA-ATGATATCA 776
||||||||||||||||||||| |||||||||||||| ||||| ||||||| | || |||
Sbjct 539 AAGAAAACGAAATGCAGAAGCTTATAATTCACCTGAAAGAAAGCAAAGAAGA-GACGTCA 597
Query 777 ACAAGAAAATGCGTACTTTGCAAAATCTACTACCTAACTCTCACAAGGACGACAACGAAT 836
|||||||||||||||||||||| ||||||||||||| |||||| |||| ||||||||||
Sbjct 598 ACAAGAAAATGCGTACTTTGCAGGATCTACTACCTAATTCTCACGAGGATGACAACGAAT 657
Query 837 CGATGTTGGATGAAGCAATCAATTATATGACAAACCTTCAACTTCAAGTTCAGATGATGA 896
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 658 CAATGTTGGATGAAGCAATCAATTATATGAAAAACCTTCAACTTCAAGTTCAGATGATGA 717
Query 897 CGATGGGTAACAGATTTGTTACACCATCAATGATGATGCCTTTGGGGCCGAACTACTCTC 956
||||||||||||||||||||||||||||||||||| | |||||||||||| | |||||||
Sbjct 718 CGATGGGTAACAGATTTGTTACACCATCAATGATGTTACCTTTGGGGCCGCATTACTCTC 777
Query 957 AGATGGGTCTAGCAATGGGTGTGGGAATGCAAATGGGCGAACAACAGTTTCTGCCTGCAC 1016
|||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct 778 AGATGGATCTAGCAATGGGTATGGGAATGCAAATGGGCGCACAACAGTTTCTGCCTGCAC 837
Query 1017 ATGTTCTAGGAGCTGGCTTGCCTGGGATTAATGATTCAGCAGATATGCTAAGGTTTCTTA 1076
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 838 ATGTCCTAGGAGCTGGCTTGCCTGGGATTAATGATTCAGCAGATATGCTAAGGTTTCTTA 897
Query 1077 ACCATCCTGGACTAATGCCAATGCAAAACTCTGCACCTTTCATTCCAACGGAAAATTGTT 1136
||||| |||||||||||| ||||||||||||||||||||||| |||||||||| ||||||
Sbjct 898 ACCATTCTGGACTAATGCAAATGCAAAACTCTGCACCTTTCACTCCAACGGAAGATTGTT 957
Query 1137 CCCCACAATCTGTCCCTCCATCGTGCGCTGCTTTCCCTAACCAAATACCAAATCCCAACT 1196
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||
Sbjct 958 CCCCACAATCTGTCCCTCCATCGTGCGCGGCTTTCCCTAACCAAATACCAAACCCCACCT 1017
Query 1197 CTTTGTCAAATTTAGATGGTGCAAC-C-TTACACAAGAAATCAAGGAAAACTAACAGATG 1254
||||||||||||||||||||||| | | |||||||||||||||||||| | |||||||||
Sbjct 1018 CTTTGTCAAATTTAGATGGTGCATCTCCTTACACAAGAAATCAAGGAACATTAACAGATG 1077
Query 1255 AAGGAATTCTCCCTGGTAAAAATCTGGAAACCCGTGAGCAGATGAAGTAAACAGTGATGA 1314
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1078 AAGGAATTCTCCCTGGTAAAAATCTGGAAACCCGTGAGCAGATGAAATAAACAGTGATGA 1137
Query 1315 TTGTTACCTGC 1325
|||||||||||
Sbjct 1138 TTGTTACCTGC 1148
> Ahg939289 jgi|Araly1|939289|scaffold_503480.1
Length=1087
Score = 1445 bits (782), Expect = 0.0
Identities = 947/1023 (93%), Gaps = 26/1023 (3%)
Strand=Plus/Plus
Query 323 TATAACGAGGATTTCATGAAGAGTATCATCCA---TGGTGGTGGTGGTGCCATCACA-AA 378
||||||||||| |||||||||||||||||||| ||||||||||||||||| || | ||
Sbjct 69 TATAACGAGGACTTCATGAAGAGTATCATCCATGGTGGTGGTGGTGGTGCCAACA-AGAA 127
Query 379 TCTCGGGGACACGCAGGTTGTTCCACAAAGTCATGTTGCTGCTGCC-CATGAAACA-AAC 436
|||||| ||||||||||||||||||||||||||||||| | || || ||||||||| ||
Sbjct 128 TCTCGGAGACACGCAGGTTGTTCCACAAAGTCATGTTGTTCCT-CCTCATGAAACAGAA- 185
Query 437 ATGTTGGAAAGCAATAAACATGTTGACGATT---C------TGAGACTTTGAAAGCTTCT 487
|||||||||||||||| |||||||||||||| | |||||||||||||||||||
Sbjct 186 ATGTTGGAAAGCAATAGACATGTTGACGATTCAACTTTGATTGAGACTTTGAAAGCTTCT 245
Query 488 TCATCAAAGAGGATGATGGTTGATTATCATAACCGAAAGAAGATCAAGTTTATACCTCCT 547
||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||
Sbjct 246 TCATCAAAGAGGATGATGGTTGATTATGATAACCGAATGAAGGTCAAGTTTATACCTCCT 305
Query 548 GATGAGCAATCCGTGGTTGCTGATAGG-TCGTTCAAATTGGGCTTTGACACTTCCTCCGT 606
||||||||||| ||||||||||| ||| | ||| ||| ||||||| ||||||||||||
Sbjct 306 GATGAGCAATCTGTGGTTGCTGAAAGGATGGTT-GAATCGGGCTTTAACACTTCCTCCGC 364
Query 607 AGGTTTCACTGAAGACAGTGAAGGATCGATGTATCTAAGCAGTAGTCTAGATGACGAGTC 666
|||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 365 AGGTTTTACTGAAGACAGTGAAGGATCGATGTATCTGAGCAGCAGTCTAGATGACGAGTC 424
Query 667 AGATGATGCGAGGCCACAAGTTCCTGCAAGAACAAGAAAAGCTTTGGTCAAAAGAAAACG 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 425 AGATGATGCGAGGCCACAAGTTCCTGCAAGAACAAGAAAAGCTTTGGTCAAAAGAAAACG 484
Query 727 AAATGCAGAAGCGTA-TAATTCACCTGAGAGAAATCAAAGAA-ATGATATCAACAAGAAA 784
|||||||||||| || |||||||||||| ||||| ||||||| | || ||||||||||||
Sbjct 485 AAATGCAGAAGC-TAATAATTCACCTGAAAGAAAGCAAAGAAGA-GACATCAACAAGAAA 542
Query 785 ATGCGTACTTTGCAAAATCTACTACCTAACTCTCACAAGGACGACAACGAATCGATGTTG 844
|||||||||||||| ||||||||||||| || |||||||| ||||||||||||||||||
Sbjct 543 ATGCGTACTTTGCAGGATCTACTACCTAATTCCCACAAGGATGACAACGAATCGATGTTG 602
Query 845 GATGAAGCAATCAATTATATGACAAACCTTCAACTTCAAGTTCAGATGATGACGATGGGT 904
||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 603 GATGAAGCAATCATTTATATGAAAAACCTAAAACTTCAAGTTCAGATGATGACGATGGGT 662
Query 905 AACAGATTTGTTACACCATCAATGATGATGCCTTTGGGGCCGAACTACTCTCAGATGGGT 964
||||||||||||||||||||||||||| |||||||||||| | | |||||||||||||||
Sbjct 663 AACAGATTTGTTACACCATCAATGATGTTGCCTTTGGGGCTGCATTACTCTCAGATGGGT 722
Query 965 CTAGCAATGGGTGTGGGAATGCAAATGGGCGAACAACAGTTTCTGCCTGCACATGTTCTA 1024
|||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 723 CTAGCAATGGGTATGGGAATGCAAATGGACGCACAACAGTTTCTGCCTGCACATGTTCTA 782
Query 1025 GGAGCTGGCTTGCCTGGGATTAATGATTCAGCAGATATGCTAAGGTTTCTTAACCATCCT 1084
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 783 GGAGCTGGCTTGCCTGGGATTAATGATTCAGCAGATATGCTAAGGTTTCTTAGCCATCCT 842
Query 1085 GGACTAATGCCAATGCAAAACTCTGCACCTTTCATTCCAACGGAAAATTGTTCCCCACAA 1144
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct 843 GGACTAATGCCAATGCAAAACTCTGCACCTTTCACTCCAACGGAAGATTGTTCCCCACAA 902
Query 1145 TCTGTCCCTCCATCGTGCGCTGCTTTCCCTAACCAAATACCAAATCCCAACTCTTTGTCA 1204
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct 903 TCTGTCCCTCCATCGTGCGCTGCTTTCCCTAACCAAATACCAAACCCCACCTCTTTGTCA 962
Query 1205 AATTTAGATGGTGCAAC-C-TTACACAAGAAATCAAGGAAAACTAACAGATGAAGGAATT 1262
||||||||||||||| | | |||||||||||||||||||| | ||||||||||||||||
Sbjct 963 AATTTAGATGGTGCATCTCCTTACACAAGAAATCAAGGAACATTAACAGATGAAGGAATC 1022
Query 1263 CTCCCTGGTAAAAATCTGGAAACCCGTGAGCAGATGAAGTAAACAGTGATGATTGTTACC 1322
||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1023 CTCCCTGGTAAAATTCTGGAAACCCGTGAGCAGATGAAATAAACAGTGATGATTGTTACA 1082
Query 1323 TGC 1325
|||
Sbjct 1083 TGC 1085
Score = 111 bits (60), Expect = 1e-23
Identities = 62/63 (98%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 195 GGTTAAGCGATCAAGAGTATATGGAGCTTGTGTTTGAGAATGGCCAGATTCTTGCAAAGG 254
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GGTTAAACGATCAAGAGTATATGGAGCTTGTGTTTGAGAATGGCCAGATTCTTGCAAAGG 60
Query 255 GCC 257
|||
Sbjct 61 GCC 63
> Ahg348075 jgi|Araly1|348075|fgenesh1_pg.C_scaffold_5001467
Length=936
Score = 555 bits (300), Expect = 5e-157
Identities = 387/426 (91%), Gaps = 18/426 (4%)
Strand=Plus/Plus
Query 302 ATGGATTTGTATGAGGCAGAGTATAACGAGGATTTCATGAAGAGTATCATCCA---TGGT 358
||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||
Sbjct 1 ATGGATTTGTATGAGGCCGAGTATAACGAGGACTTCATGAAGAGTATCATCCATGGTGGT 60
Query 359 GGTGGTGGTGCCATCACA-AATCTCGGGGACACGCAGGTTGTTCCACAAAGTCATGTTGC 417
||||||||||||| || | |||||||| |||||||||||||||||||||||||||||||
Sbjct 61 GGTGGTGGTGCCAACA-AGAATCTCGGAGACACGCAGGTTGTTCCACAAAGTCATGTTGT 119
Query 418 TGCTGCC-CATGAAACAAACATGTTGGAAAGCAATAAACATGTTGAC-G----A--TT-- 467
| || || ||||||||| |||||||||||||||||| |||||||||| | | ||
Sbjct 120 TCCT-CCTCATGAAACAGACATGTTGGAAAGCAATAGACATGTTGACGGTTCAACTTTGA 178
Query 468 CTGAGACTTTGAAAGCTTCTTCATCAAAGAGGATGATGGTTGATTATCATAACCGAAAGA 527
||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||
Sbjct 179 TTGAGACTTTGAAAGCTTCTTCATCAAAGAGGATGATGATTGATTATGATAACCGAATGA 238
Query 528 AGATCAAGTTTATACCTCCTGATGAGCAATCCGTGGTTGCTGATAGG-TCGTTCAAATTG 586
||||||||||||||||||||||||||||||| ||||||||||| ||| | | || ||| |
Sbjct 239 AGATCAAGTTTATACCTCCTGATGAGCAATCTGTGGTTGCTGAAAGGAT-GGTCGAATCG 297
Query 587 GGCTTTGACACTTCCTCCGTAGGTTTCACTGAAGACAGTGAAGGATCGATGTATCTAAGC 646
|||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct 298 GGCTTTAACACTTCCTCCGCAGGTTTTACTGAAGACAGTGAAGGATCGATGTATCTAAGC 357
Query 647 AGTAGTCTAGATGACGAGTCAGATGATGCGAGGCCACAAGTTCCTGCAAGAACAAGAAAA 706
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 358 AGCAGTCTAGATGACGAGTCAGATGATGCGAGGCCACAAGTTCCTGCAAGAACAAGAAAA 417
Query 707 GCTTTG 712
||||||
Sbjct 418 GCTTTG 423
Score = 518 bits (280), Expect = 7e-146
Identities = 314/330 (95%), Gaps = 4/330 (1%)
Strand=Plus/Plus
Query 978 TGGGAATGCAAATGGGCGAACAACAGTTTCTGCCTGCACATGTTCTAGGAGCTGGCTTGC 1037
|||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct 608 TGGGAATGCAAATGGGCGCACAACAGTTTCTGCCTGCACATGTCCTAGGAGCTGGCTTGC 667
Query 1038 CTGGGATTAATGATTCAGCAGATATGCTAAGGTTTCTTAACCATCCTGGACTAATGCCAA 1097
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 668 CTGGGATTAATGATTCAGCAGATATGCTAAGGTTTCTTAACCATCCTGGACTAATACAAA 727
Query 1098 TGCAAAACTCTGCACCTTTCATTCCAACGGAAAATTGTTCCCCACAATCTGTCCCTCCAT 1157
||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct 728 TGCAAAAATCTGCACCTTTCACTCCAACGGAAGATTGTTCCCCACAATCTGTCCCTCCAT 787
Query 1158 CGTGCGCTGCTTTCCCTAACCAAATACCAAA-TCCCAACTCTTTGTCAAATTTAGATGGT 1216
|||||||||||||||||||||| |||||||| ||| | ||||||||||||||||||||||
Sbjct 788 CGTGCGCTGCTTTCCCTAACCATATACCAAACTCC-ACCTCTTTGTCAAATTTAGATGGT 846
Query 1217 GCA--ACCTTACACAAGAAATCAAGGAAAACTAACAGATGAAGGAATTCTCCCTGGTAAA 1274
||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct 847 GCATCACCTTACACAAGAAATCAAGGAACATTAACAGATGAAGGAATTCTCCCTGGTAAA 906
Query 1275 AATCTGGAAACCCGTGAGCAGATGAAGTAA 1304
|||||||||||||||||||||||||| |||
Sbjct 907 AATCTGGAAACCCGTGAGCAGATGAAATAA 936
Score = 261 bits (141), Expect = 1e-68
Identities = 172/186 (92%), Gaps = 5/186 (3%)
Strand=Plus/Plus
Query 756 GAAATCAAAGAA-ATGATATCAACAAGAAAATGCGTACTTTGCAAAATCTACTACCTAAC 814
|||| ||||||| | || |||||||||||||||||||||||||| |||||||||||||
Sbjct 423 GAAA-CAAAGAAGA-GACATCAACAAGAAAATGCGTACTTTGCAGGATCTACTACCTAAT 480
Query 815 TCTCACAAGGACGACAACGAATCGA-TGTTGGATGAAGCAATCAATTATATGACAAACCT 873
||||||||||| ||||||||||| | ||||||||||||||||||||||||||| ||||||
Sbjct 481 TCTCACAAGGATGACAACGAATC-AGTGTTGGATGAAGCAATCAATTATATGAAAAACCT 539
Query 874 TCAACTTCAAGTTCAGATGATGACGATGGGTAACAGATTTGTTACACCATCAATGATGAT 933
||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |
Sbjct 540 TCAACTTCAAGTTCAGATGATGACGATGGGTAACACATTTGTTACAACATCAATGATGTT 599
Query 934 GCCTTT 939
||||||
Sbjct 600 GCCTTT 605
> Ahg486715 jgi|Araly1|486715|fgenesh2_kg.5__2707__AT3G62080.2
Length=1614
Score = 355 bits (192), Expect = 6e-97
Identities = 219/232 (94%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 1575 AGAAACATTAATAAATTATCGAA-CACTATCGGAGTGATAAAAATCATAACTCGACGTTC 1633
|||||||||||||||||||| || ||||||||||||||| |||||||| | ||||| |||
Sbjct 1614 AGAAACATTAATAAATTATC-AACCACTATCGGAGTGATCAAAATCATCATTCGACCTTC 1556
Query 1634 CTCTCTGTTTATGAAACAAGCTGCTGACTTTATACAATGGAGTGAAGCTATTGTTTCTAG 1693
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 1555 CTCTCTGTTTATGAAACAAGCTCCTGACTTTATACAATGGAGTGAAGCTATTGTTTCTTG 1496
Query 1694 AATCCAAACAAGAGGCATAGCATACAAATACTCAACTCACTTTACCCGGTTCTATTCTAT 1753
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1495 AATCCGAACAAGAGGCATAGCATACAAATACTCAACTCACTTTACCCGTTTCTATTCTAT 1436
Query 1754 TTATATGATACTGAGTGTATTTCTTCACTAAGAACAACAGGAAGAGAAGAGA 1805
|||||||||||||||||||||||||| ||||| ||||||| |||||||||||
Sbjct 1435 TTATATGATACTGAGTGTATTTCTTCTCTAAGTACAACAGTAAGAGAAGAGA 1384
> Ahg485327 jgi|Araly1|485327|fgenesh2_kg.5__1319__AT3G62080.2
Length=1471
Score = 228 bits (123), Expect = 1e-58
Identities = 140/148 (95%), Gaps = 1/148 (1%)
Strand=Plus/Minus
Query 1659 GACTTTATACAATGGAGTGAAGCTATTGTTTCTAGAATCCAAACAAGAGGCATAGCATAC 1718
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct 1419 GACTTTATACAATGGAGTGAAGCTCTTGTTTCTAGAATCCGAACAAGAGGCATAGCATAC 1360
Query 1719 AAATACTCAACTCACTTTACCCGGTTCTATTCTATTTATATGATACTGAGTGTATTTCTT 1778
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct 1359 AAATACTCAACTCACTTTACCCGGTTCTATTCTATCTATATGATACCGAGTGTATTTCTT 1300
Query 1779 CACT-AAGAACAACAGGAAGAGAAGAGA 1805
| || ||| |||||| ||||||||||||
Sbjct 1299 CTCTTAAGTACAACAAGAAGAGAAGAGA 1272
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67762545855
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5