BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G62700.1
Length=4816
Score E
Sequences producing significant alignments: (Bits) Value
Ahg939358 jgi|Araly1|939358|scaffold_503549.1 7509 0.0
Ahg483963 jgi|Araly1|483963|fgenesh2_kg.4__3023__AT2G47800.1 1513 0.0
> Ahg939358 jgi|Araly1|939358|scaffold_503549.1
Length=4681
Score = 7509 bits (4066), Expect = 0.0
Identities = 4469/4663 (96%), Gaps = 30/4663 (1%)
Strand=Plus/Plus
Query 30 GAGACGATGCGGTGGCTTTCTTCTACGTGGCTCTCCGATCTCTCTTGCTCTTCATCGTCC 89
|||||||||||||||||||||||||||||| |||||||||||||||| ||||| || ||
Sbjct 15 GAGACGATGCGGTGGCTTTCTTCTACGTGGGTCTCCGATCTCTCTTGTTCTTCGCCGGCC 74
Query 90 GTCATAGAACCGTCTTCATCTCTTCCCGCTCCAATCCAATGGCTAAGATTCATTCTACTC 149
|| ||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct 75 GTTATAGAACCGTCTTCATCTCTTCCAGCTCTAATCCGATGGCTAAGATTCATTCTACTC 134
Query 150 TCTCCTTGCCCACAACGACTTCTCTCCTCCACCGTCGATGTCCTCTTCCTCCTCATCCTC 209
||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||
Sbjct 135 TCTCCTTGCCCACAACGGCTTCTCTCCTCCACCGTCGATCTTCTCTTCCTCCTCATCCTC 194
Query 210 TTCTTCTTCGCTATCCAAAAACTCTGTTC-T--TCA---TC-G--TCTTCAAGAACCAAC 260
||||||||||||||||||||||||||||| | ||| || | |||||||||| ||||
Sbjct 195 TTCTTCTTCGCTATCCAAAAACTCTGTTCTTCATCATCTTCTGCTTCTTCAAGAATCAAC 254
Query 261 GGTGAAGCTGACATCACTAAACCTCTACTCGGAAGAAGAACACGAACCAGAACAACCGGT 320
||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||
Sbjct 255 GGTGAAGCTGACATCACTAAACCTCTACTAGGAAGAAGAACAGGAACAAGAACAACCGGG 314
Query 321 TTGTTCAAAACGACAGTCGTGGTAACCATTGTCCTGTCGTTTTGCTCTC-TCGTGCTCTG 379
||||||||||||||| |||| |||||||| |||||||||||||||| | ||||||||||
Sbjct 315 TTGTTCAAAACGACAATCGTAGTAACCATCCTCCTGTCGTTTTGCTC-CATCGTGCTCTG 373
Query 380 CGTTTCGGCTTTTTTCACCACTCGGACGAAATTAAAGCTCGTTGATACTCTGTTTTGGCT 439
||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 374 CGTTTTGGCTTTTTTCACCACTCGGACGAAATTAAAGCTCGTTGATACTTTGTTTTGGTT 433
Query 440 AATCCACGCCGTTACTAACGTCGTCATCGCCGTTTTAGTTCTCCACCTAAAA-AGATTCG 498
||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct 434 AATCCACGCCGTTACTAACGTCGTCATCGCCGTTTTAGTTCTCCACC-AAAAGAGATTCG 492
Query 499 CATCTCCGTCTCATCCGTTAACGTTACGAATCTACTGGGTTTTCAATTTCGTCGTCACAA 558
| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 493 CTTCTGTGTCTCATCCGTTAACGTTACGAATCTATTGGGTTTTCAATTTCGTCGTCACAA 552
Query 559 CTCTCTTCACCGTCTCCGGAATTCTCCATCTTCTCT-C--CGACGATCCCGCCGCCGCGA 615
||||||||||||||||||| |||||||||||||||| | ||||||| ||||||||||||
Sbjct 553 CTCTCTTCACCGTCTCCGGGATTCTCCATCTTCTCTCCGACGACGATTCCGCCGCCGCGA 612
Query 616 GTCTAAGAGCAGACGACGTCGCTTCGTTCATCTCCTTCCCTTTAACCGCCGTTCTACTCC 675
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 613 GTCTAAGAGCAGACGACGTCGCTTCGTTCATCTCCTTCCCTTTAACCGCCGTTCTACTTC 672
Query 676 TCGTCTCCATCAAAGGATCCACCGGAGTTGTAGTAACCACCAGCAACGTCACAGCTCCGG 735
|||||||||||||||||||||||||||| |||||||||| |||| ||||||| ||||||
Sbjct 673 TCGTCTCCATCAAAGGATCCACCGGAGTAGTAGTAACCAGTAGCAGCGTCACATCTCCGG 732
Query 736 CGAAATCAAACGACGTC-GTTGTAGAGAAATCCGAAAACGTTTCACTATACGCATCAGCA 794
||||||||||||||||| | | ||||||||| |||||||||||| |||||||||||||||
Sbjct 733 CGAAATCAAACGACGTCGGGT-TAGAGAAATTCGAAAACGTTTCTCTATACGCATCAGCA 791
Query 795 TCGTTTATATCGAAAACTTTCTGGTTATGGATGAATCCGTTACTAAGAAAAGGCTACAAA 854
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 792 TCGTTTATATCGAAAACTTTCTGGTTATGGATGAATCCGTTACTAAGCAAAGGCTACAAA 851
Query 855 TCTCCATTAAACCTCGACCAAGTTCCGACTCTATCACCGGAGCACAGAGCAGAGAAGCTC 914
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 852 TCTCCATTAAACCTCGACCAAGTTCCGACTCTATCACCGGAGCACAGAGCCGAGAAGCTC 911
Query 915 GCGACGCTCTTCGAATCGAAATGGCCCAAACCTCAAGAGAACTCGAGAAACCCCGTCCGT 974
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 912 GCGACGCTCTTCGAATCGAAATGGCCCAAACCACAAGAGAACTCGAGAAACCCCGTCCGT 971
Query 975 ACAACTCTAATCAGATGTTTCTGGAAAGAGATCGCATTCACGGCGGTTCTAGCCATCATC 1034
|||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 972 ACAACTCTAATCCGATGTTTTTGGAAGGAGATCGCATTCACGGCGGTTCTAGCCATCATC 1031
Query 1035 CGTCTCAGTGTCATCTACGTCGGACCAGTTCTCATCCAAAGCTTCGTCGATTTCACTTCC 1094
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1032 CGTCTCAGCGTCATCTACGTCGGACCAGTTCTCATCCAAAGCTTCGTCGATTTCACTTCC 1091
Query 1095 GGCAAAAGATCATCGCCGTCACAGGGTTACTACCTCGTTCTTATCCTCCTAATAGCCAAA 1154
|||||| ||||||||||||| |||||||||||||||||||| ||||||||| | ||||||
Sbjct 1092 GGCAAAGGATCATCGCCGTCGCAGGGTTACTACCTCGTTCTCATCCTCCTAGTGGCCAAA 1151
Query 1155 TTCGTCGAAGTGTTATCTACTCATCAGTTCAATTTCAATTCACAGAAGCTAGGGATGCTT 1214
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1152 TTCGTCGAAGTGTTATCGACTCATCAGTTCAATTTCAATTCCCAGAAGCTAGGGATGCTT 1211
Query 1215 ATAAGATCCACTCTCATAACAGCTCTCTACAAGAAAGGTTTAAAGCTAACCGGCTCTGCT 1274
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1212 ATAAGATCCACTCTCATAACAGCCCTCTACAAGAAAGGTTTAAAGCTAACCGGCTCTGCT 1271
Query 1275 CGTCAGAATCACGGCGTTGGTCAAATCGTTAATTACATGGCCGTTGATGCTCAGCAACTT 1334
||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1272 CGTCAGAATCACGGCGTTGGTCAAATCGTGAATTACATGGCAGTTGATGCTCAGCAACTC 1331
Query 1335 TCTGATATGATGCTTCAGCTACACGCAATCTGGCTCATGCCGTTGCAAGTAGCTGCGGCT 1394
|||||||||||||||||||| |||||||||||||| ||||| ||||||||||| | ||||
Sbjct 1332 TCTGATATGATGCTTCAGCTCCACGCAATCTGGCTGATGCCTTTGCAAGTAGCGGTGGCT 1391
Query 1395 ATTGTGCTTCTTTATAACACTCTTGGACCTTCTGTGGTCACTACTGTTATCGGTTTAACC 1454
||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1392 ATTGTGCTTCTCTACGGTACTCTTGGACCTTCTGTGGTCACTACTATTATCGGTTTAACC 1451
Query 1455 GGAATCTTCGTGTTTATTCTCTTGGGAACGAAACGAAACAATAGGTATCAATTCAGTTTG 1514
|||||||||||||| ||||||||||||||||| ||||||||| ||| |||||||||||||
Sbjct 1452 GGAATCTTCGTGTTCATTCTCTTGGGAACGAAGCGAAACAATCGGTTTCAATTCAGTTTG 1511
Query 1515 ATGATGAATCGTGATTCACGGATGAAAGCAACTAATGAGATGCTTAATTACATGAGAGTG 1574
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1512 ATGACGAATCGTGATTCACGGATGAAAGCAACTAATGAGATGCTTAATTACATGAGAGTG 1571
Query 1575 ATCAAGTTTCAAGCTTGGGAAGATCATTTCAACGAGAGGATTCTCAAGTTTAGAGAAATG 1634
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1572 ATCAAGTTTCAAGCTTGGGAAGATCATTTCAACGAGAGGATTCTCAAGTTTAGAGATATG 1631
Query 1635 GAGTTTGGTTGGCTATCTAAGTTTCTTTATTCGATTGCCGGTAACATTATCGTGCTTTGG 1694
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1632 GAGTTTGGTTGGCTATCCAAGTTTCTTTATTCGATTGCCGGAAACATTATCGTGCTTTGG 1691
Query 1695 AGCACACCGGTGTTGATCTCGGCGCTAACTTTCACAACCGCGGTTTTCTTGGGTGTCAAG 1754
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1692 AGCACTCCGGTGTTGATCTCGGCGCTCACTTTCACAACCGCGGTTTTCTTGGGTGTCAAG 1751
Query 1755 CTTGATGCAGGAACGGTTTTCACCACAACGACGATTTTCAAGATTCTTCAAGAACCGATA 1814
||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1752 CTTGATGCAGGCACGGTTTTCACCACAACAACGATTTTCAAGATTCTTCAAGAACCGATC 1811
Query 1815 AGGACGTTTCCGCAGTCTATGATCTCTCTTTCGCAGGCTATGATCTCTCTCGGAAGACTC 1874
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1812 AGGACGTTTCCGCAGTCTATGATCTCTCTTTCGCAGGCCATGATCTCTCTCGGAAGACTG 1871
Query 1875 GATGCTTACATGATGAGCAGGGAGCTATCGGAAGAGACTGTGGAAAGGAGTCAAGGGTGT 1934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1872 GATGCTTACATGATGAGCAGGGAGCTATCGGAAGAGACTGTGGAAAGGAGTCAAGGGTGT 1931
Query 1935 GATGGGAATGTCGCTGTGGAGATCAAAGATGGAAGCTTTAGTTGGGATGATGAAGATGAC 1994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1932 GATGGGAATGTCGCTGTGGAGATCAAAGATGGAAGCTTTAGTTGGGATGATGAAGATGAC 1991
Query 1995 GAGCCTGCAATTGAAAACATCAACTTTGAAGTTAAGAAAGGAGAGCTCGCTGCGATTGTT 2054
| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1992 GCGCCTGCAATTGAAAACATCAACTTTGAGGTTAAGAAAGGAGAGCTCGCTGCGATTGTA 2051
Query 2055 GGGACCGTTGGTTCAGGGAAGTCTTCATTGTTAGCTTCAGTTCTTGGCGAAATGCACAAA 2114
||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct 2052 GGGACTGTTGGTTCAGGGAAGTCTTCATTGTTAGCTGCAGTTCTCGGCGAAATGCACAAA 2111
Query 2115 CTTTCAGGCAAGGTTCGGGTTTGTGGGACAACTGCTTATGTAGCGCAAACTTCGTGGATT 2174
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2112 CTTTCAGGCAAGGTTCGGGTTTGTGGGTCAACTGCTTATGTAGCGCAAACTTCGTGGATT 2171
Query 2175 CAAAATGGAACGGTTCAAGACAATATCTTGTTTGGTCTTCCTATGAATAGAAGCAAGTAC 2234
|| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2172 CAGAACGGAACGGTTCAAGACAATATCTTGTTTGGTCTTCCTATGGATAGAAGCAAGTAC 2231
Query 2235 AATGAAGTTCTCAAGGTTTGTTGTTTAGAAAAAGATATGCAGATTATGGAGTTTGGAGAC 2294
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2232 AATGAAGTTCTCAAGGTTTGTTGTTTAGAAAAAGATATGCAGATCATGGAGTTTGGAGAC 2291
Query 2295 CAGACTGAGATCGGAGAACGCGGAATTAACCTTAGTGGAGGGCAGAAGCAGAGGATACAA 2354
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2292 CAGACTGAGATCGGGGAACGCGGAATTAACCTTAGTGGAGGTCAGAAGCAGAGGATACAA 2351
Query 2355 CTTGCGCGAGCGGTTTATCAGGAATCAGATGTGTATTTACTTGATGATGTCTTTAGCGCG 2414
||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 2352 CTTGCGCGAGCAGTTTATCAGGAATCCGATGTGTATTTACTCGATGATGTCTTTAGCGCA 2411
Query 2415 GTGGATGCTCATACCGGTTCAGACATATTCAAGAAATGTGTAAGGGGAGCATTAAAAGGA 2474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2412 GTGGATGCTCATACCGGTTCAGACATATTCAAGAAATGTGTAAGGGGAGCATTAAAAGGA 2471
Query 2475 AAGACTATCTTGCTAGTAACTCATCAAGTAGACTTCCTTCACAACGTTGATCGCATCTTG 2534
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2472 AAGACTATCTTGCTAGTAACTCACCAAGTAGACTTCCTTCACAACGTTGATCGCATCTTG 2531
Query 2535 GTTATGCGAGATGGAATGATTGTGCAGTCAGGAAAATACGACGAATTAGTGAGCTCGGGG 2594
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 2532 GTTATGCGAGATGGAATGATTGTGCAGTCAGGAAAATACGATGAATTAGTGAGCTCCGGG 2591
Query 2595 TTAGACTTTGGGGAATTGGTAGCAGCGCACGAGACATCAATGGAGCTAGTTGAAGCTGGC 2654
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2592 TTAGATTTTGGGGAATTGGTAGCAGCGCACGAGACATCAATGGAGCTAGTTGAAGCTGGA 2651
Query 2655 TCGGCATCAGCCACTGCAGCAAATGTGCCAATGGCATCACCAATAACACAGAGAAGTATT 2714
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2652 TCGGCATCAGCCACTGCAGCAAATGTGCCAATGGCATCACCAAGAACACAGAGAAGTATT 2711
Query 2715 TCAATAGAGTCTCCCCGTCAACC---AA-A--A---TCACCAAAAGTACATAGAACTACT 2765
||||||||||||||||||||||| || | | || |||||||||||||||||||||
Sbjct 2712 TCAATAGAGTCTCCCCGTCAACCCCCAACACCAAAGTCTCCAAAAGTACATAGAACTACT 2771
Query 2766 TCAATGGAGTCTCCAAGAGTACTTAGAACTACTTCGATGGAGTCTCCTCGTTTAAGCGAG 2825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2772 TCAATGGAGTCTCCAAGAGTACTTAGAACTACTTCGATGGAGTCTCCTCGTTTAAGCGAG 2831
Query 2826 CTAAACGATGAAAGCATCAAGTCGTTTCTCGGCTCCAACATACCAGAAGATGGATCAAGA 2885
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2832 CTAAACGATGAAAGCATCAAGTCGTTTCTCGGCTCCAACATCCCAGAAGATGGATCAAGA 2891
Query 2886 CTGATCAAAGAAGAAGAAAGAGAAGTAGGACAAGTGAGCTTTCAAGTTTACAAACTCTAC 2945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2892 CTGATCAAAGAAGAAGAAAGAGAAGTAGGACAAGTGAGCTTTCAAGTTTACAAACTCTAC 2951
Query 2946 TCAACAGAAGCTTATGGCTGGTGGGGAATGATACTTGTTGTCTTCTTCTCTGTGGCTTGG 3005
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2952 TCAACAGAAGCTTATGGGTGGTGGGGAATGATACTTGTTCTCTTCTTCTCTGTGGCTTGG 3011
Query 3006 CAAGCCTCTTTAATGGCCAGCGATTATTGGCTTGCCTATGAAACATCAGCCAAAAACGAG 3065
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3012 CAAGGCTCTTTAATGGCTAGCGATTATTGGCTTGCCTATGAAACATCAGCCAAAAACGAG 3071
Query 3066 GTTTCATTCGACGCTACAGTCTTCATCCGCGTCTATGTCATTATCGCTGCTGTTTCTATT 3125
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 3072 GTTTCATTCGACGCTACAGTCTTCATCCGCGTCTATGTCATTATTGCTGCTGTTTCCATT 3131
Query 3126 GTTCTTGTGTGCCTCCGGGCATTTTATGTCACTCACTTAGGCCTCAAGACTGCTCAGATC 3185
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3132 GTTCTTGTGTGCCTCCGGGCAATTTATGTCACTCACTTAGGCCTCAAGACTGCTCAGATC 3191
Query 3186 TTCTTCAAACAGATTCTCAACAGTCTCGTGCATGCACCAATGTCATTCTTCGACACCACG 3245
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 3192 TTCTTCAAACAGATTCTCAACAGTCTCGTGCATGCACCAATGTCTTTTTTCGACACCACG 3251
Query 3246 CCATCGGGAAGAATTCTCAGTCGGGCATCTACTGATCAGACCAATGTGGATATCTTTATC 3305
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 3252 CCATCGGGAAGAATTCTCAGTCGGGCATCTACTGATCAGACCAATGTAGATATCTTCATC 3311
Query 3306 CCGTTCATGATAGGACTAGTGGCCACAATGTATACTACTCTTCTCAGCATCTTCATAGTA 3365
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 3312 CCGTTCATGATAGGACTAGTGGCCACAATGTATACTACTCTGCTCAGCATCTTCATAGTA 3371
Query 3366 ACATGTCAATACGCTTGGCCTACTGTTTTCTTCATAATTCCGCTTGGATGGCTTAACATT 3425
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 3372 ACATGTCAATACGCTTGGCCAACTGTTTTCTTCATAATTCCTCTTGGATGGCTTAACATT 3431
Query 3426 TGGTACCGGGGATATTACCTCGCATCATCTCGGGAACTAACTCGTCTTGACTCAATCACC 3485
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 3432 TGGTACCGGGGATATTACCTTGCATCATCTCGGGAACTAACTCGTCTTGACTCGATCACC 3491
Query 3486 AAGGCTCCAGTAATCCACCATTTCTCCGAGAGCATAGCCGGAGTGATGACAATCAGAGCT 3545
||||| |||||||||||||||||||| || |||||||| |||||||||||||||||| ||
Sbjct 3492 AAGGCCCCAGTAATCCACCATTTCTCAGAAAGCATAGCTGGAGTGATGACAATCAGATCT 3551
Query 3546 TTCAAGAAACAGCCAATGTTTAGGCAAGAGAATGTGAAGCGAGTGAACGCCAATCTCAGG 3605
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3552 TTCAAGAAACAGCAAATGTTTAGGCAAGAGAATGTGAAGCGAGTGAACGCCAATCTCAGG 3611
Query 3606 ATGGACTTCCACAACAATGGTTCAAACGAATGGCTCGGGTTTCGGTTAGAGCTGATTGGG 3665
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3612 ATGGACTTCCACAACAATGGTTCAAACGAATGGCTCGGTTTTCGGTTAGAGCTGATTGGG 3671
Query 3666 AGCTGGGTACTCTGCATCTCGGCTCTGTTCATGGTCATGTTACCAAGCAACATTATCAAA 3725
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 3672 AGCTGGGTACTCTGCATCTCGGCTCTGTTCATGGTCTTATTACCAAGCAACATTATCAAA 3731
Query 3726 CCAGAGAATGTTGGGCTATCACTTTCTTACGGACTATCGCTGAACGGTGTTCTGTTTTGG 3785
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3732 CCAGAAAATGTTGGGCTTTCACTTTCTTACGGACTATCGCTGAACGGTGTTCTGTTTTGG 3791
Query 3786 GCAATATATCTAAGCTGTTTCATTGAGAACAAGATGGTTTCTGTTGAGAGAATCAAACAG 3845
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3792 GCAATATACCTAAGCTGTTTCATTGAGAACAAGATGGTTTCTGTTGAAAGAATCAAACAG 3851
Query 3846 TTCACTGACATTCCCGCGGAAGCGAAATGGGAGATCAAAGAGAGCCGTCCACCTCCAAAT 3905
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3852 TTCACTGACATTCCCTCGGAAGCGAAATGGGAGATCAAAGAGAGCCGTCCACCTCCAAAT 3911
Query 3906 TGGCCATACAAAGGTAACATACGTCTCGAAGATGTCAAGGTACGATATAGACCAAACACG 3965
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 3912 TGGCCATACAAAGGTAACATACGTCTCGAAGATGTCAAGGTACGGTATAGACCAAACACG 3971
Query 3966 CCTCTTGTGCTCAAGGGACTTACAATAGACATCAAAGGAGGAGAGAAGATTGGTGTAGTT 4025
||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||
Sbjct 3972 CCTCTTGTGCTCAAGGGACTTACAATAGACATCAAAGGAGGGGATAAGATTGGTGTGGTT 4031
Query 4026 GGCAGAACAGGAAGCGGCAAGTCGACTTTGATTCAGGTTTTGTTTAGACTTGTGGAGCCA 4085
|| ||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 4032 GGAAGAACAGGAAGTGGCAAATCGACTTTGATTCAGGTCTTGTTTAGACTTGTGGAGCCA 4091
Query 4086 TCTGGTGGGAAGATAATCATCGACGGAATCGATATCTGCACTTTAGGACTTCATGATCTA 4145
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4092 TCTGGTGGCAAGATAATCATCGACGGAATCGATATCTGCACTTTAGGACTTCATGATCTA 4151
Query 4146 AGGTCAAGATTCGGTATCATTCCTCAAGAACCTGTTCTCTTCGAAGGAACCGTAAGGAGT 4205
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 4152 AGGTCAAGATTCGGTATCATTCCTCAAGAACCTGTTCTCTTCGAAGGAACAGTAAGGAGT 4211
Query 4206 AACATTGATCCAACAGAGAAATACT-CTGATGAAGAAATCTGGAAGAGTCTCGAGCGATG 4264
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 4212 AACATTGATCCAACAGAGAAATA-TACTGATGAAGAAATCTGGAAGAGTCTCGAGCGATG 4270
Query 4265 TCAACTTAAGGATGTTGTTGCTTCCAAGCCCGAGAAGCTCGACTCTCTCGTGGCGGATAA 4324
||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct 4271 TCAACTTAAGGATGTTGTTTCTTCCAAGCCCGAGAAGCTCGATTCTCTCGTGGCGGATAA 4330
Query 4325 TGGCGAGAACTGGAGTGTTGGTCAAAGACAATTACTGTGTTTAGGAAGGGTTATGCTGAA 4384
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 4331 TGGCGAGAACTGGAGTGTTGGTCAAAGACAGTTACTCTGTTTAGGAAGGGTTATGCTGAA 4390
Query 4385 ACGAAGCAGGATTCTGTTTCTAGACGAAGCAACTGCGTCGGTTGATTCGCAGACTGATGC 4444
||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 4391 ACGAAGCAGGATTCTATTTCTAGATGAAGCAACTGCGTCCGTTGATTCGCAGACTGATGC 4450
Query 4445 TATGATCCAAAAGATCATCAGGGAGGATTTCTCGGACTGTACCATTATCAGCATTGCTCA 4504
||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||
Sbjct 4451 TATGATCCAAAAGATCATCAGGGAGGATTTCGCCGAGTGTACCATTATCAGCATTGCTCA 4510
Query 4505 TAGGATTCCAACAGTTATGGACTGTGATCGCGTTCTTGTCATAGACGCAGGTAAAGCGAA 4564
|||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 4511 TAGGATTCCAACAGTTATGGACTGTGATCGTGTTCTTGTCATAGACGCAGGAAAAGCGAG 4570
Query 4565 AGAGTATGATAGTCCAGTCCGTTTACTGGAGAGACAGTCGTTGTTTGCTGCATTGGTTCA 4624
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 4571 AGAGTATGATAGTCCAGTTCGTTTACTGGAGAGACAGTCGTTGTTTGCTGCATTGGTACA 4630
Query 4625 AGAGTATGCTCTCCGATCTGCCGGAATATGAGACCACTTCttt 4667
|||||||||||||||||| |||||||||||||||||||| |||
Sbjct 4631 AGAGTATGCTCTCCGATCCGCCGGAATATGAGACCACTT-TTT 4672
> Ahg483963 jgi|Araly1|483963|fgenesh2_kg.4__3023__AT2G47800.1
Length=4674
Score = 1513 bits (819), Expect = 0.0
Identities = 1537/1882 (82%), Gaps = 56/1882 (3%)
Strand=Plus/Plus
Query 2802 ATGGAGTCTCCTCGTTTAAGCGAGCTAAACGATGAAAGCA--TCAAGTCGTTTCTCGGCT 2859
||||| ||||||| ||||| || |||||||||| || || ||||||| |||||||| |
Sbjct 2779 ATGGACTCTCCTCACTTAAGTGATCTAAACGATG-AA-CATGTCAAGTCATTTCTCGG-T 2835
Query 2860 CCAACATACC--AGAAGATGGATC-AAGACTGATCAAAGAAGAAGAAAGAGAAGTAGGAC 2916
| || ||| ||||||||| || ||| || ||||||||||||||||| ||| | ||||
Sbjct 2836 TC-TCACACCGTAGAAGATGGCTCGAAG-CTCATCAAAGAAGAAGAAAGGGAAATCGGAC 2893
Query 2917 AAGTGAGCTTTCAAGTTTACAAACTCTACT-CAACAGAAGCTTATGGCTGGTGGGG-AAT 2974
| || ||| | ||||||||||| |||| | || || || |||||||||||||| | |
Sbjct 2894 AGGTCAGCCTGGGAGTTTACAAACAGTACTGC-ACTGAGGCCTATGGCTGGTGGGGCATT 2952
Query 2975 GATACTTGTTGTCTTCTTCTCTGTGGCTTGGCAAGCCTCTTTAATGGCCAGCGATTATTG 3034
| | |||||| | || |||||| || | ||||| | ||| |||||||||||||||| ||
Sbjct 2953 G-TGCTTGTTCTGTTTTTCTCTCTGACGTGGCAGGGTTCTCTAATGGCCAGCGATTACTG 3011
Query 3035 GCTTGCCTATGAAACATCAGCCAAAAACG-AGGTTTCATTCGACGCTACAGTCTTCATCC 3093
|||||| || |||||||| |||||||| | | ||||||| || ||| | || ||||| |
Sbjct 3012 GCTTGCATACGAAACATCTGCCAAAAATGCA-ATTTCATTTGATGCTTCCGTTTTCATTC 3070
Query 3094 GCGTCTATGTCATTATCGCTGC-TGTTTCTATTGTTCTT-GTGTGCCTCCGGGCATTTTA 3151
||| || |||||||| || | |||||| || || || ||| |||||||| ||| |||
Sbjct 3071 TCGTATACGTCATTATTGC-CCTTGTTTCCATCATT-TTGGTGAGCCTCCGGTCATATTA 3128
Query 3152 TGTCACTCACTTAGGCCTCAAGACTGCTCAGATCTTCTTCAAACAGATTCTCAACAGTCT 3211
||||| ||||| || |||||||| ||||||||||| ||| ||||||||| |||||| |
Sbjct 3129 CGTCACCCACTTGGGACTCAAGACGGCTCAGATCTTTTTCCGACAGATTCTTAACAGTAT 3188
Query 3212 CGTGCATGCACCAATGTCATTCTTCGACACCACGCCATCGGGAAGAATTCTCAGTCGGGC 3271
| | || || || ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3189 CTTACACGCTCCCATGTCATTCTTTGACACCACGCCATCGGGAAGAATTCTCAGTCGGGC 3248
Query 3272 ATCTACTGATCAGACCAATGTGGATATCTTTATCCCGTTCATGATAGGACTAGTGGCCAC 3331
||| ||||||||||||||||| |||||| | || ||||| ||| | ||||| |||||| |
Sbjct 3249 ATCAACTGATCAGACCAATGTCGATATCCTCATTCCGTTTATGCTCGGACTTGTGGCCTC 3308
Query 3332 AATGTATACTACTCTTCTCAGCATCTTCATAGTAACATGTCAATACGCTTGGCCTACTGT 3391
|||||| || ||||| || ||||| |||||| | || || || ||||||||||| ||||
Sbjct 3309 AATGTACACCACTCTGCTTAGCATTTTCATAATTACTTGCCAGTACGCTTGGCCAACTGC 3368
Query 3392 TTTCTTCATAATTCCGCTTGGATGGCTTAACATTTGGTACCGGGGA-TATTACCTCGCAT 3450
||||| | ||||| ||||| ||||||||||| ||||||||| | ||||||||||| |
Sbjct 3369 ATTCTTTGTGATTCCCCTTGGCTGGCTTAACATCTGGTACCGGA-ACTATTACCTCGCTT 3427
Query 3451 CATCTCGGGAACTAACTCGTCTTG-ACTCAATCACCAAGGCTCC-AGTAATCCACCATTT 3508
| || || ||| |||| || |||| |||| ||||| |||||||| | | |||||||||||
Sbjct 3428 CTTCCCGTGAATTAACGCG-CTTGGACTCGATCACTAAGGCTCCCA-TCATCCACCATTT 3485
Query 3509 CTCCGAGAGCATAGCCGGAGTGATGACAATCAGAGCTTTCAAGAAACAGCCAATGTTTAG 3568
||| ||||| ||||| ||||||||||||||| || | |||| ||| ||| | |||||||
Sbjct 3486 CTCAGAGAGTATAGCAGGAGTGATGACAATCCGATCATTCAGGAAGCAGGCGTTGTTTAG 3545
Query 3569 GCAAGAGAATGTGAAGCGAGTGAACGCCAATCTCAGGATGGACTTCCACAACAATGGTTC 3628
|||||| ||||||||||| || || |||||||||||||||||||||||||||||||| ||
Sbjct 3546 GCAAGAAAATGTGAAGCGTGTAAATGCCAATCTCAGGATGGACTTCCACAACAATGGCTC 3605
Query 3629 AAACGAATGGCTCGGGTTTCGGT-TAGAGCTGATTGGGAGCTGGGTACTCTGCATCTCGG 3687
|||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||
Sbjct 3606 CAACGAATGGCTCGGGTTTCG-TCTAGAGCTGATTGGGAGCTGGGTGCTCTGCATCTCGG 3664
Query 3688 CTCTGT-TCATGGTCAT-GTTACCAAGCAACATTATCAAACCAGAGAATGTTGGGCTATC 3745
|| ||| | ||||| || |||||| ||||| |||||| |||||||||||| ||||| ||
Sbjct 3665 CTTTGTGT-ATGGT-ATTGTTACCCAGCAATGTTATCAGACCAGAGAATGTAGGGCTGTC 3722
Query 3746 ACTTTCTTACGGACTATCGCTGAACG-GTGTTCTGTT-TTGGGCAATATATC-TAAGCTG 3802
||||| |||||||| || |||||| | |||||||| || | || |||| | | |||||
Sbjct 3723 CCTTTCGTACGGACTGTCCCTGAACTCG-GTTCTGTTCTTTGCCA-TATA-CATGAGCTG 3779
Query 3803 -TTTCATTGAGAACAAGATGGTTTCTGTTGAGAGAATCAAACAGTTCACTGACATTCCCG 3861
||| | ||||||||||||||||||||||| || ||||||||||||||||| |||||
Sbjct 3780 CTTTG-TCGAGAACAAGATGGTTTCTGTTGAAAGGATCAAACAGTTCACTGATATTCCTT 3838
Query 3862 CGGAAGC-GAAATGGGAGATCAAAGAGAGCCGTCCACCTCCAAATTGGCCATACAAAGGT 3920
| ||| | || ||||||| ||||| | || ||||||| | |||||||| | | | ||
Sbjct 3839 CTGAATCCGAG-TGGGAGAGAAAAGAAACCCTTCCACCTTCGAATTGGCCCTTCCATGGC 3897
Query 3921 AACATACGTCTCGAAGATGTCAAGGTACGATATAGACCAAACACGCCTCTTGTGCTCAAG 3980
| ||| ||| ||||| ||||||| || || ||||||||||| || |||||||||||
Sbjct 3898 GATGTACATCTAGAAGACCTCAAGGTGCGCTACAGACCAAACACTCCACTTGTGCTCAAA 3957
Query 3981 GGACTTACAATAGACATCAAAGGAGGAGAGAAGATTGGTGTAGTTGG-CAGAACAGGAAG 4039
||| | || | ||||||||||||||||||||| ||||||| ||||| | ||||||||||
Sbjct 3958 GGAATCACTCTTGACATCAAAGGAGGAGAGAAGGTTGGTGTGGTTGGAC-GAACAGGAAG 4016
Query 4040 CGGCAAGTCGACTTTGATTCAGGTTTTGTTTAGACTTGTGGAGCCATCTGGTGGGAAGAT 4099
||| || || |||||||| || || ||||| || ||||| || ||||| || ||||||||
Sbjct 4017 CGGGAAATCCACTTTGATCCAAGTCTTGTTCAGGCTTGTAGAACCATCAGGAGGGAAGAT 4076
Query 4100 AATCATCGACGGAATCGATATCTGCACTTTAGGACTTCATGATCTAAGGTCAAGATTCGG 4159
|||||| ||||| || ||||| ||||| |||| || |||||||| ||||||||||||||
Sbjct 4077 AATCATAGACGGGATTGATATAAGCACTCTAGGGCTACATGATCTCAGGTCAAGATTCGG 4136
Query 4160 TATCATTCCTCAAGAACCTGTTCTCTTCGAAGGAACCGTAAGGAGTAACATTGATCCAAC 4219
|||||||| ||||||||||| ||||| ||||||||||| || || ||||| || |||||
Sbjct 4137 AATCATTCCGCAAGAACCTGTCCTCTTTGAAGGAACCGTGAGAAGCAACATCGACCCAAC 4196
Query 4220 AGAGAAATACTCTGATGAAGAAATCTGGAAGAGTCTCGAGCGATGTCAACTTAAGGATGT 4279
||| | |||||||| || |||||||||||||| ||||| ||||| ||||| ||||||||
Sbjct 4197 GGAGCAGTACTCTGACGATGAAATCTGGAAGAGCCTCGAACGATGCCAACTCAAGGATGT 4256
Query 4280 TGTTGCTTCCAAGCCCGAGAAGCTCGACTCTCTCGTGGCGGATAATGGCGAGAACTGGAG 4339
||||||| ||||||| || |||||||| ||| | |||| ||||||||| |||||||||||
Sbjct 4257 TGTTGCTACCAAGCCTGATAAGCTCGATTCTTTGGTGGTGGATAATGGGGAGAACTGGAG 4316
Query 4340 TGTTGGTCAAAGACAA-TTACTGTGTTTAGGAAGGGTTATGCTGAAACGAAGCAGGA-TT 4397
|| || || || || || || |||||||||||||||||| ||||||| ||||| | ||
Sbjct 4317 CGTCGGGCAGAGGCAGCTT-CTATGTTTAGGAAGGGTTATGTTGAAACGTAGCAG-ACTT 4374
Query 4398 CTGTTTCTAGACGAAGCAACTGCGTCGGTTGATTCGCAGACTGATGCTATGATCCAAAAG 4457
||||| |||||||||||||| || || |||||||| || || ||||| |||| || |||
Sbjct 4375 CTGTTCCTAGACGAAGCAACCGCATCCGTTGATTCCCAAACCGATGCCGTGATTCAGAAG 4434
Query 4458 ATCATCAGGGAGGATTTCTCGGACT-GTACCATTATCAGCATTGCTCATAGGATTCCAAC 4516
||||| || || || ||| || || | ||||| |||||||| || || ||||||| ||
Sbjct 4435 ATCATTAGAGAAGACTTCGCGT-CTTGCACCATAATCAGCATCGCCCACCGGATTCCTAC 4493
Query 4517 AGTTATGGACTGTGATCGCGTTCTTGTCATAGACGCAGGTAAAGCGAAAGAGTAT-GATA 4575
||| |||||| | ||||| || || ||||| || || || ||||||||||||| | ||||
Sbjct 4494 AGTGATGGACGGCGATCGAGTCCTGGTCATTGATGCTGGAAAAGCGAAAGAGT-TCGATA 4552
Query 4576 GTCCAG-TCCGTTTACTGGAGAGACAGTCGT-TGTTTGCTGCATTGGTTCAAGAGTATGC 4633
| || | || |||| |||||||||||||| | ||||||| || | || |||||||| ||
Sbjct 4553 GCCCCGCTC-GTTTGCTGGAGAGACAGTC-TCTGTTTGCGGCGCTAGTGCAAGAGTACGC 4610
Query 4634 TCTCCGATCTGCCGGAATATGA 4655
||||||||||||||||||||||
Sbjct 4611 TCTCCGATCTGCCGGAATATGA 4632
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 182257717097
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5