BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G00240.1
Length=2784
Score E
Sequences producing significant alignments: (Bits) Value
Ahg490542 jgi|Araly1|490542|fgenesh2_kg.6__3676__AT4G00240.1 2861 0.0
Ahg935061 jgi|Araly1|935061|scaffold_403049.1 2451 0.0
Ahg352267 jgi|Araly1|352267|fgenesh1_pg.C_scaffold_6002860 510 2e-143
Ahg489999 jgi|Araly1|489999|fgenesh2_kg.6__3133__AT4G11840.1 472 9e-132
Ahg931791 jgi|Araly1|931791|scaffold_304248.1 58.4 3e-07
> Ahg490542 jgi|Araly1|490542|fgenesh2_kg.6__3676__AT4G00240.1
Length=2964
Score = 2861 bits (1549), Expect = 0.0
Identities = 1691/1762 (96%), Gaps = 0/1762 (0%)
Strand=Plus/Plus
Query 205 TCGTTTTCAAGTCATTCAGATTTATCATACTCAGGCAGGCTAGATTCGTCTGGTCATGGT 264
||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||
Sbjct 313 TCGTTTTCAAGTCATTCCGATTTATCATACTCGGGCAGGCTAGATTCGTCTACTCATGGT 372
Query 265 TTTACATCTACCGCATCGCCGCATAGTCCCGGTATGCACATTGTGCCCTTTGGTAAAGCC 324
| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 373 TATACATCTACCGCATCGCCACATAGTCCCGGCATGCACATTGTGCCCTTTGGTAAAGCC 432
Query 325 TCCTTGAAGGTCCTCTTGTTGCATGGTAATTTGGATATTTGGGTTTCTTGTGCTAATAAT 384
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 433 TCCTTGAAGGTCCTCTTGTTGCATGGGAATTTGGATATTTGGGTTTCTTGTGCAAATAAT 492
Query 385 CTACCAAACTTAGATTTGTTTCATAAGACATTGGGTGTTGTGTTTGGTGGCATGACCAAT 444
||||||||| | |||||||| || ||||||||||||||||||||||| ||||||| ||||
Sbjct 493 CTACCAAACATGGATTTGTTCCACAAGACATTGGGTGTTGTGTTTGGAGGCATGAGCAAT 552
Query 445 ATGATCGAAGGCCAGTTGAGCAAGAAGATCACTAGTGATCCTTACGTGTCCATATCAGTC 504
||||||||||| ||| |||||||||||||||| |||||||||||||| |||||||||||
Sbjct 553 ATGATCGAAGGACAGCTGAGCAAGAAGATCACAAGTGATCCTTACGTTTCCATATCAGTT 612
Query 505 GCTGGTGCTGTCATAGGAAGAACATATGTCATTAGCAACAGCGAAAATCCTGTCTGGCAG 564
|| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 613 GCAGGTGCAGTCATAGGAAGAACATATGTCATAAGCAACAGCGAAAATCCTGTCTGGCAG 672
Query 565 CAGCATTTTTATGTCCCTGTAGCTCATCACGCTGCCGAGGTCCATTTTGTTGTTAAGGAC 624
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 673 CAGCATTTTTATGTCCCTGTTGCTCATCACGCTGCTGAGGTCCATTTTGTTGTTAAGGAC 732
Query 625 AGTGATGCCGTCGGTTCACAGCTTATAGGAATTGTTACAATCCCTGTTGAACAAATTTAC 684
||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 733 AGTGACGCCGTTGGTTCACAGCTTATAGGAATTGTTACAATCCCCGTTGAACAAATATAC 792
Query 685 TCAGGTGCAAGAATTGAAGGGACTTACTCCATTCGAGACAGCAATGGAAAGCCTTGTAAA 744
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 793 TCAGGTGCAAGAATTGAAGGGACTTACTCTATTCGTGACAGCAATGGAAAGCCTTGTAAA 852
Query 745 CCAGGGGCAACTCTATCATTGTCGATTCAGTATACTTCAATGAATAAACTCAGTGTTTAT 804
|| ||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||
Sbjct 853 CCTGGGGCAACTCTATCATTATCGATTCAATATACTTCAATGGATAAACTCAGTGTTTAT 912
Query 805 CACAGCGGAGTTGGTGCAGGTCCCTATTACCAGGGGGTGCCTGGAACATATTTTCCTCTT 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 913 CACAGCGGAGTTGGTGCAGGTCCCTATTACCAGGGGGTGCCTGGAACATATTTTCCTCTT 972
Query 865 AGGGAAGGTGGAAGTGTCACATTGTACCAAGATGCACATGTACCTGAAGGGATGCTCCCG 924
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 973 AGGGAAGGTGGAAGTGTAACATTGTATCAAGATGCACATGTACCTGAAGGGATGCTCCCG 1032
Query 925 GGAATAAAACTCGGAAATGGAATGTGTTACGAACATGGAAAGTGTTGGCATGATATGTTT 984
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033 GGAATAAAACTCGGCAATGGAATGTGTTACGAACATGGAAAGTGTTGGCATGATATGTTT 1092
Query 985 CATGCCATTTGTCAAGCTAGACGTTTGATTTATATTACAGGCTGGTCAGTGTGGCATAAT 1044
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1093 CATGCCATTTGTCAAGCTAGACGTTTGATTTATATTACAGGATGGTCAGTGTGGCATAAT 1152
Query 1045 GTCAGGCTTGTTCGGGATAAAGAAGATCCTTCTTCAGAATGTAGACTAGGTGAGCTCCTA 1104
|||||||||||| | ||||||||||||||| |||||||||||| || |||||||| |||
Sbjct 1153 GTCAGGCTTGTTAGAGATAAAGAAGATCCTGCTTCAGAATGTACTCTGGGTGAGCTTCTA 1212
Query 1105 AGATCAAAGTCCCAAGAAGGTGTGAGAGTCCTGCTTTTGGTTTGGGACGACCCAACTTCA 1164
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1213 AGATCAAAGTCCCGAGAAGGTGTGAGAGTCCTGCTTTTGGTTTGGGACGACCCAACTTCA 1272
Query 1165 CAAAACATCTTGGGATACATGACCGATGGGGTTATGGGAACCCATGACGAGGAGACACGC 1224
||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct 1273 CAAAACATCTTGGGATATATGACAGATGGGGTGATGGGAACCCATGACGAGGAGACACGA 1332
Query 1225 CGTTTTTTCAAGGACTCCTCAGTGCAAGTCTTGCTATGCCCTCGAAATGCTGGAAAGCGA 1284
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1333 CGTTTTTTCAAGGACTCCTCAGTTCAAGTCTTGCTATGCCCTCGAAATGCTGGAAAGCGA 1392
Query 1285 CATAGTTGGGTCAAACAGAGGGAAGTTGGAACCATCTATACACACCACCaaaaaaaCTTA 1344
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1393 CATAGTTGGGTCAAACAGAGGGAAGTTGGAACCATCTATACACACCACCAAAAAACCTTG 1452
Query 1345 ATAGTAGATGCCGATGCTGGGGGTAACAGAAGGAAAATCGTAGCTTTTGTGGGCGGGCTT 1404
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1453 ATAGTAGATGCCGATGCTGGGGGTAACAGAAGGAAAATCGTAGCTTTTGTGGGCGGACTT 1512
Query 1405 GATCTATGTGATGGCCGATATGATACTCCTCAACATCCGTTGTTTAGGACACTGCAAACA 1464
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 1513 GATCTATGTGATGGCCGATATGATACTCCTCAACATCCGTTGTTTAGGACGCTGCGAACT 1572
Query 1465 GATCATAATGGTGACTATCACAACCCCACTTTCACGGGTAACGTGTCCGGTTGTCCAAGA 1524
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1573 GATCATAAAGGTGACTATCACAACCCCACTTTCACGGGTAATGTGTCCGGTTGTCCAAGA 1632
Query 1525 GAACCTTGGCATGACTTGCACAGTAAGATTGATGGCCCAGCTGCGTATGATGTGCTGACA 1584
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1633 GAACCTTGGCATGACTTGCACAGTAAGATTGATGGCCCAGCTGCGTATGATGTGCTGACC 1692
Query 1585 AATTTTGAGGAGAGGTGGCTGAAGGCTGCTAAGCCTCACAGAATCAATAAATTGAAGACG 1644
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1693 AATTTTGAGGAGAGGTGGCTGAAGGCTGCTAAGCCTCACAGAATCAATAAACTGAAGACA 1752
Query 1645 TCATATGATGATGCACTACTAAGGATCGACAGGATTCCAGATATATTAAGAGTTTTGGAT 1704
|| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1753 TCGTATGATGACGCATTACTAAGGATCGACAGGATTCCAGATATATTAAGAGTTTTGGAT 1812
Query 1705 GCTCCTACTGTTAGTGCAAACGACCCCGAGGCTTGGCATGTTCAGATTTTCCGGTCAATC 1764
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 1813 GCTCCTACTGTTAGTGCAAACGACCCTGAGGCTTGGCATGTTCAGATTTTCCGTTCAATC 1872
Query 1765 GATTCAAACTCTGTGAAAGGTTTTCCAAAGGATCCAAAATATGCTACAAGCAAGAATTTG 1824
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 1873 GATTCAAACTCTGTGAAAGGTTTCCCAAAGGATCCGAAATATGCTACAAGCAAGAATTTG 1932
Query 1825 GTGTGCGGTAAGAATGTGCTCATTGACATGAGCATACACACCGCATATGTAAAGGCCATT 1884
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1933 GTGTGCGGTAAGAATGTGCTCATTGACATGAGCATACACACCGCATATGTGAAGGCCATT 1992
Query 1885 CGTGCAGCTCAACACTTCATCTACATCGAGAACCAGTATTTCATTGGATCCTCCTACGAC 1944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1993 CGTGCAGCTCAACACTTCATCTACATCGAGAACCAGTATTTCATTGGATCCTCCTACGAC 2052
Query 1945 TGGAATGCTCACAAGGACATAG 1966
||||||||||||||||||||||
Sbjct 2053 TGGAATGCTCACAAGGACATAG 2074
Score = 1365 bits (739), Expect = 0.0
Identities = 791/817 (97%), Gaps = 0/817 (0%)
Strand=Plus/Plus
Query 1966 GGTGCCAACAACCTGATTCCTATGGAAATTGCGTTGAAGATTGCTGATAAGATCAGAGCA 2025
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2146 GGTGCCAACAACCTGATTCCTATGGAAATTGCATTGAAGATTGCTGATAAGATCAGAGCA 2205
Query 2026 AAGGAACGGTTTGCTGCATATATTGTCATTCCAATGTGGCCAGAAGGAGTTCCTACCGGC 2085
| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 2206 AGGGAACGGTTTGCTGCATATATTGTCATTCCAATGTGGCCGGAAGGAGTTCCAACCGGC 2265
Query 2086 GCCGCTACACAAAGAATTCTATATTGGCAGCACAAGACGATGCAAATGATGTATGGAACT 2145
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2266 GCCGCTACACAAAGAATTTTATATTGGCAGCACAAGACGATGCAAATGATGTATGGAACT 2325
Query 2146 ATCTACAATGCGTTAGTGGAGGCCGGGCTTGAAGATGAATACTCCCCACAAGACTATTTG 2205
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||
Sbjct 2326 ATCTACAATGCGTTAGTGGAGGCCGGGCTCGAAGGTGAATACTCCCCACAAGACTATCTG 2385
Query 2206 AATTTCTTCTGTCTTGGAAACCGAGAAATGGTGAACGGAAATAATGAATCGGGTACAGGA 2265
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2386 AATTTCTTCTGTCTTGGAAACAGAGAAATGGTGAACGGAAATAATGAATCGGGTACAGGA 2445
Query 2266 AGTGCAAGCAACGAGAACACTCCTCAGGGATTATGTCGAAAGAGCAGAAGATTTATGATA 2325
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2446 AGTGCAAGCAATGAGAACACTCCTCAGGGATTATGTCGAAAGAGCAGAAGATTTATGATA 2505
Query 2326 TATGTTCATTCAAAAGGGATGGTTGTTGATGATGAGTATGTGGTAATTGGATCTGCAAAC 2385
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2506 TATGTTCATTCCAAAGGGATGGTTGTTGATGATGAGTATGTGGTAATTGGATCTGCAAAC 2565
Query 2386 ATAAACCAAAGATCAATGGAGGGGACAAGAGATACAGAGATTGCAATGGGAGCTTACCAG 2445
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2566 ATAAACCAAAGATCAATGGAAGGGACAAGAGATACAGAGATTGCAATGGGAGCTTACCAG 2625
Query 2446 CCTCAACATACATGGGCACGACGACAGTCAGGTCCTCGGGGTCAGATCTACGGATATAGA 2505
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 2626 CCTCAACATACATGGGCACGACGACAATCTGGTCCTCGGGGTCAGATCTACGGATATAGA 2685
Query 2506 ATGTCGCTTTGGGCAGAACACATGGCACTGCTAGATGATTGCTTTGTGGAGCCAGAGAGT 2565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2686 ATGTCGCTTTGGGCAGAACACATGGCACTGCTAGATGATTGCTTTGTGGAGCCAGAGAGT 2745
Query 2566 CTAGGGTGTGTAAGGAAAGTGAGAACAGTGGCGGAGGAGAACTGGGAACAGTTTAGGAGT 2625
|||| |||||||||||||||||||||| |||||||||| |||||| ||||||||||||||
Sbjct 2746 CTAGAGTGTGTAAGGAAAGTGAGAACAATGGCGGAGGATAACTGGAAACAGTTTAGGAGT 2805
Query 2626 GAGGAAGTGTCGGAGATGAGAGGACATCTGATGAAATATCCGGTGGAAGTTGATCGGAAA 2685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2806 GAGGAAGTGTCGGAGATGAGAGGACATCTGATGAAATATCCGGTGGAAGTTGATCGGAAA 2865
Query 2686 GGCAAAGTCCGACCACTTCCAGGAAGTGAGGAGTTCCCTGATGTCGGAGGAAACGTTGTT 2745
|| |||||||| ||||||||||| || ||||||||||||||||||||||||||| ||||
Sbjct 2866 GGAAAAGTCCGGCCACTTCCAGGGAGCGAGGAGTTCCCTGATGTCGGAGGAAACATTGTC 2925
Query 2746 GGATCCTTTCTAGCCATACAGGAGAATCTCACTATCT 2782
||||||||||| |||||||||||||||||||| ||||
Sbjct 2926 GGATCCTTTCTTGCCATACAGGAGAATCTCACAATCT 2962
Score = 158 bits (85), Expect = 3e-37
Identities = 124/141 (88%), Gaps = 10/141 (7%)
Strand=Plus/Plus
Query 1 ATGGAGAATTATGGTTGGAATTACC--CTTATTACCCTTACAGGCCTCCGCGGCCTAATC 58
|||||||||||||||| ||| | || ||||||||||||| |||||||| |||||| |
Sbjct 1 ATGGAGAATTATGGTTCGAA-T-CCATCTTATTACCCTTATAGGCCTCCCCGGCCT--T- 55
Query 59 CTCCTTACCCAGCACCGCCTCATCACCATGGATCAATGTCTCATTCGGGTCCATTAGAC- 117
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 56 ATCCTTACCCACCACAGCCTCATCACCATGGATCAATGTCTCATTCGGGTCCATTAGACT 115
Query 118 -CACC-ACCACCCTCCAATGA 136
|||| ||||||||||| |||
Sbjct 116 ACACCCACCACCCTCCATTGA 136
> Ahg935061 jgi|Araly1|935061|scaffold_403049.1
Length=3304
Score = 2451 bits (1327), Expect = 0.0
Identities = 2152/2545 (85%), Gaps = 78/2545 (3%)
Strand=Plus/Plus
Query 269 CATCTACCGCATCGCCGCATAGTCCCGG-TATGCACATTGTGC-C-CTTTGGTAAAGCCT 325
||||||||| ||| || |||||| ||| |||||| | || | | |||||||||| |
Sbjct 769 CATCTACCGAATCCCCACATAGT-GCGGATATGCAGA-TG-ACTCTGTTTGGTAAAGGGT 825
Query 326 CCTTGAAGGTCCTCTTGTTGCATGGTAATTTGGATATTTGGGTTTCTTGTGCTAATAATC 385
| ||||||||||| ||||||||||| ||||||||||||||| | | | ||| || ||||
Sbjct 826 CTTTGAAGGTCCTGTTGTTGCATGGGAATTTGGATATTTGGATCTATCATGCAAAAAATC 885
Query 386 TACCAAACTTAGATTTGTTTCATAAGACATTGGGTGTTGTGTTTGGTGGCA-TGACCA-- 442
| || ||| | ||| |||| ||||||||| |||||| | ||||||| | | || |||
Sbjct 886 TCCCTAACATGGATATGTTCCATAAGACACTGGGTGATATGTTTGGAAG-ATTG-CCAGG 943
Query 443 ATATGATCGAAGGCCAG-TTGAGCAAG-AAGATCACTAGTGATCCTTACGTGTCCATATC 500
| | || ||||| ||| || || || ||||| || ||||| |||||||| || ||||
Sbjct 944 A-AAAATTGAAGGGCAGCTT-AG-TAGTAAGATTACCAGTGACCCTTACGTTTCTGTATC 1000
Query 501 AGTCGCTGGTGCTGTCATAGGAAGAACATATGTCATTAGCAACAGCGAAAATCCTGTCTG 560
||| || |||||||| || ||||||||||||||||| || ||||||||||||||||| ||
Sbjct 1001 AGTTGCAGGTGCTGTGATTGGAAGAACATATGTCATGAGTAACAGCGAAAATCCTGTTTG 1060
Query 561 GCA-GCAGCATTTTTATGTCCCTGTAGCTCATCACGCTGCCGAGGTCCATTTTGTTGTTA 619
| | ||| ||||||||||| ||||| |||||||| ||||| || || |||||||||||||
Sbjct 1061 G-ATGCAACATTTTTATGTTCCTGTTGCTCATCATGCTGCAGAAGTTCATTTTGTTGTTA 1119
Query 620 AGGACAGTGATGCCGTCGGTTCACAGCTTATAGGAATT-GTTACAATCCCTGTTGAACAA 678
| |||||||||| || ||||||||||| ||||| || ||||||||||| || |||||
Sbjct 1120 AAGACAGTGATGTTGTGGGTTCACAGCTAATAGG-GTTGGTTACAATCCCGGTGGAACAG 1178
Query 679 ATTTACTCAGGTG-CAAGAATTGAAGGGACTTACTCC-ATTCGAGACAGCAATGGAAAGC 736
|| |||||||||| ||| ||||||||| ||||| ||| || | | |||| ||||| ||||
Sbjct 1179 ATATACTCAGGTGCCAA-AATTGAAGGAACTTA-TCCGATACTAAACAGTAATGGGAAGC 1236
Query 737 CTTGTAAACCAGGGGCAACTCTATCATTGTCGATTCAGTATACTTCAATGAATAAACTCA 796
|||||||||||||||||| | ||||||| ||||| ||||||||| | ||| | |||||||
Sbjct 1237 CTTGTAAACCAGGGGCAAATTTATCATTATCGATCCAGTATACTCCTATGGACAAACTCA 1296
Query 797 GTGTTTATCA-CAGCGGAGTTGGTGCAGGTCCCT-ATTACCAGGGGGTGCCTGGAACATA 854
|||||||||| || |||||||| |||||| ||| ||||||| ||||| |||||||||||
Sbjct 1297 GTGTTTATCATCA-TGGAGTTGGGGCAGGT-CCTGATTACCAAGGGGTACCTGGAACATA 1354
Query 855 TTTTCCTCTTAGGGAAGGTGGAAGTGTCACATTGTACCAAGATGCACATGTACCTGAAGG 914
|||||| ||||| |||| |||| ||| | |||||| |||||||||||||| || |||||
Sbjct 1355 TTTTCCGCTTAGAAAAGGCGGAACTGTGAGATTGTATCAAGATGCACATGTCCCAGAAGG 1414
Query 915 GATGCTCCCGGGAATAAAACTCGGA-AATGGAATGTGTTACGAACATGGAAAGTGTTGGC 973
||||||||| || |||| ||| ||| |||||||||| |||||||||||| ||||||||||
Sbjct 1415 GATGCTCCCTGGTATAAGACT-GGACAATGGAATGTCTTACGAACATGGGAAGTGTTGGC 1473
Query 974 ATGATATGTTTC-ATGCCATTTGTCAAGCTAGACGTTTGATTTATATTACAGGCTGGTCA 1032
|||||||| ||| ||||||| | || || || ||||| |||||||| ||||| ||||||
Sbjct 1474 ATGATATG-TTCGATGCCATACGCCAGGCAAGGCGTTTAATTTATATCACAGGTTGGTCA 1532
Query 1033 GTGTGGCATAATGTCAGGCTTGTTCGGGATAAAGAAGATCCTTCTTCAGAATGTAGACTA 1092
|||||||| || || ||||| ||||| |||||| || ||| | || ||||||| ||
Sbjct 1533 GTGTGGCACAAAGTTAGGCTGGTTCGTGATAAATTAGGTCCGGCATCCGAATGTACTCTT 1592
Query 1093 GGTGAGCTCCTAAGATCAAAGTCCCAAGAAGGTGTGAGAGTCCTGCTTTTGGTTTGGGAC 1152
|| ||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||
Sbjct 1593 GGGGAGCTCCTAAGATCAAAGTCCCAAGAAGGCGTGAGAGTCCTCCTTTTGATTTGGGAT 1652
Query 1153 GACCCAACTTCACAAAACATCTTGGGATACATGACCGATGGGGTTATGGGAACCCATGAC 1212
||||||||||||| | ||||||||| || | || |||||||| |||| |||||||||
Sbjct 1653 GACCCAACTTCACGTAGCATCTTGGGTTATAAAACAGATGGGGTAATGGCAACCCATGAT 1712
Query 1213 GAGGAGACACGCCGTTTTTTCAAGGACTCCTCAGTGCAAGTCTTGCTATGCCCTCGAAAT 1272
||||||||||| |||||||| ||| |||||||||| |||||| |||| ||||| ||||||
Sbjct 1713 GAGGAGACACGACGTTTTTTTAAGCACTCCTCAGTTCAAGTCCTGCTTTGCCCCCGAAAT 1772
Query 1273 GCTGGAAAGCGACATAGTTGGGTCAAACAGAGGGAAGTTGGAACCATCTATACACACCAC 1332
|||||||||||||||||||||||||| |||||||||||||| || ||||||||||| ||
Sbjct 1773 GCTGGAAAGCGACATAGTTGGGTCAAGCAGAGGGAAGTTGGGACAATCTATACACATCAT 1832
Query 1333 CaaaaaaaCTTAATAGTAGATGCCGATGCTGGGGGTAACAGAAGGAAAATCGTAGCTTTT 1392
||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 1833 CAAAAAAACGTAATAGTAGATGCTGATGCTGGTGGTAACAGAAGGAAAATCGTAGCTTTT 1892
Query 1393 GTGGGCGGGCTTGATCTATGTGATGGCCGATATGATACTCCTCAACATCCGTTGTTTAGG 1452
|| || ||||||||||| || |||||||||||||| |||||||||||||||||||| |||
Sbjct 1893 GTCGGTGGGCTTGATCTGTGCGATGGCCGATATGACACTCCTCAACATCCGTTGTTCAGG 1952
Query 1453 ACACTGCAAACAGATCATAATGGTGACTATCACAACCCCACTTTCACGGGTAA-CGTGTC 1511
||||| || |||| |||||| | ||| | ||||||||||||||| ||||| || | | ||
Sbjct 1953 ACACTACAGACAGTTCATAAAGATGATTTTCACAACCCCACTTTTACGGGAAATC-TTTC 2011
Query 1512 CGGTTGTCCAAGAGAACCTTGGCATGACTTGCACAGTAAGATTGATGGCCCAGCTGCGTA 1571
|| ||||||||||| || ||||||||||| ||||||||||| |||||||| ||||||||
Sbjct 2012 AGGATGTCCAAGAGAGCCGTGGCATGACTTACACAGTAAGATCGATGGCCCGGCTGCGTA 2071
Query 1572 TGATGTGCTGACAAATTTTGAGGAGAGGTGGCTGAAGGCTGCTAAGCCTCA-CAGAATCA 1630
|||||||||||| || || |||||||| ||| |||||||||| |||||| | | ||||||
Sbjct 2072 TGATGTGCTGACCAACTTCGAGGAGAGATGGTTGAAGGCTGCGAAGCCT-AGCGGAATCA 2130
Query 1631 ATAAATTGAAGACGTCATATGATGATGCACTACTAAGGATCGACAGGATTCCAGATATAT 1690
| || || ||||| || ||||| ||||| | ||||||| || ||||||||||||||||
Sbjct 2131 AGAAGTTTAAGACTTCCTATGACGATGCGTTGTTAAGGATTGATAGGATTCCAGATATAT 2190
Query 1691 TAAGAGTTT-TGGATGCTCCTACTGTTAGTGCA-AACGACCCCGAGGCTTGGCATGTTCA 1748
|| |||||| | ||| ||||||||||||||| | ||||| || |||||||||||||||||
Sbjct 2191 TAGGAGTTTCT-GATACTCCTACTGTTAGTG-AGAACGATCCTGAGGCTTGGCATGTTCA 2248
Query 1749 GATTTTCCGGTCAATCGATTCAAACTCTGTGAAAGGTTTTCCAAAGGATCCAAAATATGC 1808
||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| ||||
Sbjct 2249 GATTTTCCGTTCAATCGATTCAAACTCTGTGAAAGGTTTCCCAAAGGATCCGAAAGATGC 2308
Query 1809 TACAAGCAAGAATTTGGTGTGCGGTAAGAATGTGCTCATTGACATGAGCATACACACCGC 1868
|||| ||||||| |||||||| || ||||| ||||| ||||| |||||||||||||| ||
Sbjct 2309 TACATGCAAGAACTTGGTGTGTGGGAAGAACGTGCTGATTGATATGAGCATACACACAGC 2368
Query 1869 ATATGT-AAAGGCCATTCGTGCAGCTCAACACTTCATCTACATCGAGAACCAGTATTTCA 1927
||||| ||| |||||||||||||| |||||||||||||| || ||||| ||||||||||
Sbjct 2369 GTATGTCAAA-GCCATTCGTGCAGCCCAACACTTCATCTATATTGAGAATCAGTATTTCA 2427
Query 1928 TTGGATCCTCCTACGACTGGAATGCTCACAAGGACATAGGTGCCAACAACCTGATTCCTA 1987
|||| || |||||| |||||||||| || |||||||||||||| || || |||||||||
Sbjct 2428 TTGGGTCTTCCTACAACTGGAATGCGCATAAGGACATAGGTGCGAATAATTTGATTCCTA 2487
Query 1988 TGGAAATTGCGTTGAAGATTGCTGATAAGATCAGAGCAAAGGAACGGTTTGCTGCATATA 2047
||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||| ||||
Sbjct 2488 TGGAAATTGCGTTGAAGATAGCTGAAAAGATCAGGGCAAATGAACGGTTTGCTGCTTATA 2547
Query 2048 TTGTCATTCCAATGTGGCCAGAAGGAGTTCCTACCGGCGCCGCTACACAAAGAATTCTAT 2107
||||||||||||||||||||||||| ||||| ||||| || |||||||| || |||||||
Sbjct 2548 TTGTCATTCCAATGTGGCCAGAAGGTGTTCCAACCGGTGCTGCTACACAGAGGATTCTAT 2607
Query 2108 ATTGGCAGCACAAGACGATGCAAATGATGTATGGA-ACTATCTACAATGCGTTAGTGGAG 2166
|||||||||||||||| ||||| ||||||||| || ||||| ||||| ||||||||||||
Sbjct 2608 ATTGGCAGCACAAGACAATGCAGATGATGTAT-GAGACTATATACAAGGCGTTAGTGGAG 2666
Query 2167 GCCGGGCTTGAA-GATGAATACTCCCCACAAGACTATTTGAATTTCTTCTGTCTTGGAAA 2225
| ||||||||| || | || |||||||||||| || | ||||||||||||||||| ||
Sbjct 2667 ACAGGGCTTGAAGGA-GCATTCTCCCCACAAGATTACCTCAATTTCTTCTGTCTTGGGAA 2725
Query 2226 CCGAGAAATGGTGAACGGAAAT-AATGAA-TCGGGTACAGGAAGTGCAAGCAACG-AGAA 2282
| ||||||||||| | || ||| || || || || ||||| ||| ||||||| | | ||
Sbjct 2726 CAGAGAAATGGTGGATGG-AATCGAT-AACTCAGGAACAGGGAGTCCAAGCAATGCA-AA 2782
Query 2283 CACTCCTCAGG-GATT-ATGTC-GAAAGAGCAGAAGATTTATGATATATGTTCATTCAAA 2339
||||||||||| | || | ||| |||| ||||||||||||||| | |||||||| || ||
Sbjct 2783 CACTCCTCAGGCG-TTGA-GTCGGAAA-AGCAGAAGATTTATGGTCTATGTTCACTCGAA 2839
Query 2340 AGGGATGGTTGTTGATGATGAGTATGTGGTAATTGGATCTGCAAACATAAACCAAAGATC 2399
||||||||| ||||||||||| || || | |||||||||||||||||||||||| ||||
Sbjct 2840 AGGGATGGTAGTTGATGATGAATACGTATTGATTGGATCTGCAAACATAAACCAACGATC 2899
Query 2400 AATGGAGGGGACAAGAGATACAGAGATTGCAATGGGAGCTTACCAGCCTCAACATACATG 2459
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2900 AATGGAAGGCACAAGAGATACAGAGATTGCAATGGGAGCTTACCAGCCTCAACATACATG 2959
Query 2460 GGCACG-ACGACAGTCAGGTCCTCGGGGTCAGATCTACGGATATAGAATGTCGCTTTGGG 2518
|||| | | ||| || ||||||||||||||||| || ||||| |||||||| |||||||
Sbjct 2960 GGCAAGGAA-ACATTCTGGTCCTCGGGGTCAGATATATGGATACAGAATGTCTCTTTGGG 3018
Query 2519 CAGAACACATGGCA-C-TGCTAGATGATTGCTTTGTGG-AGCCAGAGAGTCTAGGGTGTG 2575
|||| || |||||| | | ||||||| || ||| | || || ||| ||| ||||
Sbjct 3019 CAGAGCATATGGCAACAT--TAGATGACTG-TTTCACCCAACCGGAAAGTATAGAATGTG 3075
Query 2576 TAAGGAAAGTGAGAACAGTGGCG-GAGGAG-AACTGGGAACAGTTTAGGAG-TGAGGAAG 2632
||||||||||||||||| ||| | ||| || |||||| |||||||| | || ||| ||||
Sbjct 3076 TAAGGAAAGTGAGAACAATGG-GAGAG-AGGAACTGGAAACAGTTT-GCAGCTGAAGAAG 3132
Query 2633 TGTCGGAGATGAGAGGACATCTGATGAAA-TATCCGGTGGAAGTTGATCGGAAAGGCAAA 2691
| || || |||||||||||| | || ||| || || || ||||||||||||||||| |||
Sbjct 3133 TCTCAGACATGAGAGGACATTT-ATTAAAGTACCCAGTAGAAGTTGATCGGAAAGGTAAA 3191
Query 2692 GTCCGACCACTTCCAGGAAGTGAGGA-GTTCCCTGATGTCGGAGGAAACGTTGTTGGATC 2750
||| |||||||||| || |||||| | |||||| || |||||||| ||| |||| |||||
Sbjct 3192 GTCAGACCACTTCCCGGGAGTGAG-ACGTTCCCGGACGTCGGAGGTAACATTGTCGGATC 3250
Query 2751 CTTTC-TAGCCATACAGGAGAATCT 2774
|| | |||||||||| ||||||||
Sbjct 3251 GTT-CATAGCCATACAAGAGAATCT 3274
> Ahg352267 jgi|Araly1|352267|fgenesh1_pg.C_scaffold_6002860
Length=2580
Score = 510 bits (276), Expect = 2e-143
Identities = 1556/2150 (72%), Gaps = 184/2150 (9%)
Strand=Plus/Plus
Query 469 AAGATCACTAGTGATCCTTACGTGT-CCATATC-AGTCGCTGGTGCTGTCATAGGAAGAA 526
|||||||| ||||||||||| || | | | || | || | |||||||| || || ||||
Sbjct 265 AAGATCACAAGTGATCCTTATGT-TACTGTGTCTA-TCTCGGGTGCTGTGATTGGTAGAA 322
Query 527 CATATGTCATTAGCAACAGCGAAAATCCTGTCTGGCA-GCAGCATTTTTATGTCCCTGTA 585
| | ||| |||||||| || || |||||||| ||| | ||||||||| |||| || ||
Sbjct 323 CTTTTGTTATTAGCAATAGTGAGAATCCTGTTTGG-ATGCAGCATTTCGATGTACCGGTG 381
Query 586 GCTCATCA-CGCTGCCGAGGTCCATTTTGTTGTTAAGGACAGTGATGCCGTCGGTTCACA 644
|||||| | ||||| |||| || |||||||| || ||||||||| | || |||||
Sbjct 382 GCTCAT-AGTGCTGCTAAGGTTCACTTTGTTGTGAAAGACAGTGATATTATTGGATCACA 440
Query 645 GCTTATAGGA-ATTGTTACAATCCCTGTTGAACAAATT-TACTCAGGTGCA-AGAATTGA 701
| | || ||| | |||| |||||| || | | || | || || | | || || ||
Sbjct 441 GATCATGGGAGA-TGTTGGAATCCCAACCGAGC-AGTTGTGTTC-GGGGAATAGGATCGA 497
Query 702 AGGGACT-TACTCC-ATTC-GAGACAGCAATGGAAAGCCTTGTAAACCAGGGGCAACTCT 758
|||| || | ||| || | | | || | ||| ||||||||||||| ||| || | |
Sbjct 498 AGGG-CTGT-TTCCGATACTTA-ATAGTAGTGGGAAGCCTTGTAAACAAGGTGC-TGTGT 553
Query 759 ATCA--TTGTCGATTCAGTATACTTCAAT-GAATA-AACTCAGTGTTTATC-ACAGCGGA 813
| | ||||| |||||||| ||| |||| ||| | || | || |||| | | || ||
Sbjct 554 -TGAGTTTGTCTATTCAGTACACTCCAATGGAA-AGAA-TGAGACTTTACCAAAAG-GGT 609
Query 814 GTTGG-TGCAGGTCCCT-A-T-TACCAGGGGGTGCCTGGAACATATTTTCCTCTT-AGGG 868
||||| | | ||| | | | | | || || ||||| ||||| || ||| || |||
Sbjct 610 GTTGGTTTC-GGT-GTTGAGTGT-GTA-GGAGTTCCTGGTACATACTTCCCT-TTGAGGA 664
Query 869 AAGGTGGAAGTGTCACAT-TGTACCAAGATGCACATGTACCTGAAGGGA-TGCTCCCGGG 926
||||||| || || || | |||| || ||||| ||||| ||| || | | || |||
Sbjct 665 AAGGTGGTAGGGTTAC-TCTGTATCAGGATGCTCATGTTGATGACGGTACT-CTTCCGAT 722
Query 927 AATAAAACTCGGA-AAT-GGAATGTGT-TACGAACATGGAAAGTGTTGGCATGATATGTT 983
|| | || || | ||| | || || | |||||| ||||||||| | ||||||
Sbjct 723 TGTACATCT-TGATGGTGGGATTCAGTATA-G-ACATGGGAAGTGTTGGGAGGATATGGC 779
Query 984 TCATGCCATTTGTCAAGCTA-GACGTTTGATTTATATTACAGGCTGGTCAGTGTGGCATA 1042
| |||| || | || || | || | ||||||||||| ||||| |||||||| | |||
Sbjct 780 TGATGCAATAAGACAGGCAAGGA-GGTTGATTTATATCACAGGTTGGTCAGTTTTCCATC 838
Query 1043 ATGTCAGGCTTGTTCG-GGATAAAGAA-GATCCTTCTTCAGAATGTAGACTAGGTGAGCT 1100
|| ||||| ||||| | | || || ||||| | | ||| ||| | |||| ||| |
Sbjct 839 CGGTTAGGCTGGTTCGTCG-T-AACAAGGATCCAAC--C-GAAGGTACATTAGGGGAGTT 893
Query 1101 -CCT-AAGATCAAAGTCCCAAGAAGGTGTGAGAGTCCTGCTTTTGGTTTGGGACGACCCA 1158
| | ||| ||||| || ||||||||||| ||||| || ||||||| ||||| || |||
Sbjct 894 GCTTAAAG-TCAAA-TCTCAAGAAGGTGTTAGAGTGTTGGTTTTGGTGTGGGATGATCCA 951
Query 1159 ACTTC-ACAAAACATCTTGGG--ATACATGACCGATGGGGTTATGGGAAC-CCA-TGACG 1213
||||| | | | || |||| ||||| | | | || ||||| |||| | | || |
Sbjct 952 ACTTCAAGGAGTCTTC-TGGGATATACA-AAAC-AAGGAGTTAT--GAACACAAGCGATG 1006
Query 1214 AGGAGACACGCCGTTTTTTCAAGGACTCCTCAGTGCAAG-TCTTGCTATG-CCCTCGAAA 1271
||||||| ||||||||||||||| | || |||||||||| || | || || ||| ||
Sbjct 1007 AGGAGACTCGCCGTTTTTTCAAGCATTCGTCAGTGCAAGTTC-TCCTTTGTCCC-AGATC 1064
Query 1272 TGCTGG-AAAGCGACATAG-TTGGGTCAAACAGA-GGGAAGTTGGAACCATCTATACACA 1328
|| || |||| | || || || | ||| | | ||||||| ||| ||||| || ||
Sbjct 1065 TGGGGGAAAAG-GTCACAGCTT-CAT-AAAAAAATCTGAAGTTGAAACAATCTACACGCA 1121
Query 1329 CCACCaaaaaaaCT-TAATAGTAGATGCCGATGCTG-GGGGTAACAGAAGGAAA-ATCGT 1385
|| | |||||||| | || |||||||| || || | | ||||||| |||| |||||
Sbjct 1122 TCATC-AAAAAACTGTCATTGTAGATGCTGAAGCAGCTCAG-AACAGAA-GAAAGATCGT 1178
Query 1386 AGCTTTTGTGGGCGGGCTTGATCTATGTG--ATGGCCGATATGATACTCCTCAA-CATCC 1442
||| ||||| || ||||| || || |||| | || |||| ||||||||| || |||||
Sbjct 1179 AGCATTTGTTGGAGGGCTAGA-CT-TGTGCAACGGACGATTTGATACTCC-AAAGCATCC 1235
Query 1443 GT-TGTTTAGGACACTGCAAACAGA-T-CATAATGGTGACTAT-CACAACCCCACTTTCA 1498
| | || |||||| | ||| | | | ||||| | ||||| | || ||| | |||
Sbjct 1236 -TCTCTTCAGGACA-T-TAAAGACACTCCATAAAGATGACT-TCCATAACGGAAATTTTG 1291
Query 1499 CGGGTAACGTGTCCGG-T--T-GTCCAAGAGAACCTTGGCATGACT-TGCACAGTAAGAT 1553
| | || || ||| | | | ||||||||||| |||||||| | ||||||| |||||
Sbjct 1292 TGACT-AC-TG--CGGATGATGGACCAAGAGAACCATGGCATGA-TCTGCACAGCAAGAT 1346
Query 1554 TGATGGCCCAGCTGCGTATGATGTGC-TGACAAATTTTGAGGAGA-GGTGGCTGAAGGCT 1611
|||||| |||||||| |||||||||| || | ||||| ||||| | | ||| ||||||||
Sbjct 1347 TGATGGTCCAGCTGCATATGATGTGCTTG-CTAATTTCGAGGA-ACGCTGGATGAAGGCT 1404
Query 1612 GCTAAGCCTCACA-GAATCAATAAATTGAAGA-CGTCATATGATGATGCACTACTAAGGA 1669
| || |||| | |||| | | | || | | || | ||||||| | || || ||||
Sbjct 1405 TCAAAACCTC-GAGGAATTGGGAGACT-AAAATCTTCTTCTGATGATTCTCTGCTTAGGA 1462
Query 1670 TCGACAGGATTCCAGATAT-ATTAAGAGTTT-TGGATGCTCCTACTGTTAGTGCA-AACG 1726
| ||||| ||||| || || | | || ||| | || ||| || ||| || || | || |
Sbjct 1463 TAGACAGAATTCCTGACATCA-TGGGACTTTCT-GAAGCTTCTTCTGCTAATG-ATAATG 1519
Query 1727 ACCCCGAGGCTTGGCATGTTCAGATTTTCCGGTCAATCGATTCAAACTCTGTGAAAGGTT 1786
| || ||| |||||||||||||| ||||||| ||||| ||||||| || || ||||| |
Sbjct 1520 ATCCAGAGTCTTGGCATGTTCAGGTTTTCCGTTCAATTGATTCAAGTTCAGTCAAAGGGT 1579
Query 1787 TTCCAAAGGATCCAAAATATGCTACAAGCAAG-AAT-TTGGTGTGCGGTAAGAATGTGCT 1844
|||||||||| ||||| | ||||| | ||| ||| || | || || |||||| | ||
Sbjct 1580 TTCCAAAGGACCCAAAGGAAGCTAC-TGGAAGAAATCTT-CTATGTGGGAAGAATATTCT 1637
Query 1845 CATTGACATGAGCATACACACCGCATATGTAAAGGCCATTCG-TGCAGCTCAACACTTCA 1903
||| || ||||||||||| | || || || ||||| || || | | ||||| |||||||
Sbjct 1638 CATAGATATGAGCATACATGCAGCTTACGTTAAGGCAATACGAT-CTGCTCAGCACTTCA 1696
Query 1904 TCTACATCGAGAACCAGTA-TTTCATTGGATCCTCCTACGACTGGAATGCTCACAAGGAC 1962
| ||||| |||||||| || |||| ||||||| || | | ||||| || | |||| |||
Sbjct 1697 TTTACATTGAGAACCAATATTTTC-TTGGATCATCATTCAACTGGGATTCAAACAAAGAC 1755
Query 1963 ATAGGTGCCAACAACCTGATTCCTATGGAAATTGCG-TTGAAGATTGCTGA-TAAGATCA 2020
| ||||| || || || || || || ||||| ||| || ||||||||| | |||||| |
Sbjct 1756 TTGGGTGCTAATAATCTAATCCCGATAGAAATCGCGCTT-AAGATTGCT-AGTAAGATTA 1813
Query 2021 GAGCAAAGGA-ACGGTTTGCTGCATATATTGTCATTCCAATGTGGCCAGAAGGAGTTCCT 2079
|||||| ||| | |||||||| ||||||||||||||||||||||||||||| | ||||
Sbjct 1814 GAGCAAGGGAGA-ATTTTGCTGCTTATATTGTCATTCCAATGTGGCCAGAAGGTGCTCCT 1872
Query 2080 ACCGGCG-CCGCTACACAAAGAATTCTATATTGGCAGCACAAGACGATGCAAATGATGTA 2138
|| | || ||| || |||||||| || ||||||||||| || ||||||||||||||
Sbjct 1873 ACAAGTTACC-CTATTCAGAGAATTCTCTACTGGCAGCACAAAACAATGCAAATGATGTA 1931
Query 2139 TGGAACTATCTACAATGCG-TTAGTGGAGGCCGGGCTTGA-AGATGAATACTCC-CCACA 2195
| ||| |||||||| || || ||||| | || ||||| || | | | |||||
Sbjct 1932 TCAAACCATCTACAAGGCACTT-GTGGAAGTTGGTCTTGATAGCC-AGTT-TGAGCCACA 1988
Query 2196 AGACTATTTGAA-TTTCTTCTGTCTTGGAAACC-GAGAAATGG-TGAACGGAA-A-TAAT 2250
||||| |||||| ||| ||||||||||||| || |||| | ||| |||| | | |
Sbjct 1989 AGACTTTTTGAACTTT-TTCTGTCTTGGAA-CCAGAGAGGTTCCTGAT-GGAACAGTTAG 2045
Query 2251 -G-A-ATCGG-GTACA-GGAAGTGCAAGCAACGAG--AACACTCCTCAGG-G-ATTATGT 2301
| | || || | ||||| || || | || || || | |||| | | | |
Sbjct 2046 CGTATATAATAGTCCTCGGAAGC-CA--CATC-AGTCAA-ACGCA-CAGGTGCAAGCTTT 2099
Query 2302 CGAAAGAG-CAGAAGATTTATGATATATGTTCATTCAAAAGGGATGGTTGTTGATGATGA 2360
|||||| | || |||| ||||| ||||||||||||||||| ||||| || ||||||||
Sbjct 2100 --AAAGAGTCGGA-GATTCATGATTTATGTTCATTCAAAAGGTATGGTAGTGGATGATGA 2156
Query 2361 GTATGTGGTAATTGGATCTGCAAACATAAACCAAAGATCAATGGAGGGGACAAGAGATAC 2420
|| ||| ||||||| || || || || ||||| ||||| |||| || || ||||| ||
Sbjct 2157 GTTTGTCTTAATTGGTTCCGCGAATATCAACCAGAGATCCTTGGAAGGAACTAGAGACAC 2216
Query 2421 AGAGATTGCAATGGGAGCTTACCAGCCTCAACATACATGGGC-ACGACGACAG-T-CAGG 2477
|| || || ||||||| || || || || ||| ||||||| | || | || | | |
Sbjct 2217 TGAAATCGCCATGGGAGGGTATCAACCACACCATTCATGGGCTATGA--A-AGGTTCTCG 2273
Query 2478 TCCTCGGGGTCAGATCTACGGATATAGAATGTCGCTT-TGGGCAGAACAC 2526
|||||| |||||||||| ||||| ||||||||| || ||||||||||||
Sbjct 2274 TCCTCGTGGTCAGATCTTTGGATACAGAATGTCG-TTATGGGCAGAACAC 2322
> Ahg489999 jgi|Araly1|489999|fgenesh2_kg.6__3133__AT4G11840.1
Length=2764
Score = 472 bits (255), Expect = 9e-132
Identities = 1332/1834 (73%), Gaps = 145/1834 (8%)
Strand=Plus/Plus
Query 469 AAGATCACTAGTGATCCTTACGTGT-CCATATC-AGTCGCTGGTGCTGTCATAGGAAGAA 526
|||||||||||||||||||| || | | | || | || | |||||||| || || ||||
Sbjct 256 AAGATCACTAGTGATCCTTATGT-TACTGTCTCTA-TCTCGGGTGCTGTGATTGGTAGAA 313
Query 527 CATATGTCATTAGCAACAGCGAAAATCCTGTCTGGCA-GCAGCATTTTTATGTCCCTGTA 585
| | ||| |||||||| || || |||||||| ||| | ||||||||| |||| || ||
Sbjct 314 CTTTTGTGATTAGCAATAGTGAGAATCCTGTATGG-ATGCAGCATTTCGATGTACCGGTT 372
Query 586 GCTCATCA-CGCTGCCGAGGTCCATTTTGTTGTTAAGGACAGTGATGCCGTCGGTTCACA 644
|||||| | ||||| || || || |||||||| || ||||||||| | || |||||
Sbjct 373 GCTCAT-AGTGCTGCGGAAGTTCACTTTGTTGTGAAAGACAGTGATATTATTGGATCACA 431
Query 645 GCTTATAGGAATTGTTACAATCCCTGTTGAACAAATT-TACTCAGGTGCA-AGAATTGAA 702
| | || ||| |||| ||||| || | | || | || || | | || || |||
Sbjct 432 GATCATGGGAGCTGTTGGTATCCCAACCGAGC-AGTTGTGTTC-GGGGAATAGGATCGAA 489
Query 703 GGGACT-TACTCC-ATTC-GAGACAGCAATGGAAAGCCTTGTAAACCAGGG-GCAACT-C 757
||| || | ||| || | | | || | ||| |||||||||||| | ||| || |
Sbjct 490 GGG-CTGT-TTCCGATACTTA-ATAGTAGTGGGAAGCCTTGTAAAGC-GGGTGC-TGTGT 544
Query 758 T-ATCATTGTCGATTCAGTATACTT-CAAT-GAATA-AACTCAGTG-TTTATCACA-GCG 811
| | | |||| |||||||||| || |||| ||| | | | || | |||| || | | |
Sbjct 545 TGAGC-CTGTCTATTCAGTATA-TTCCAATGGAA-AGGA-TGAG-GCTTTACCAAATG-G 598
Query 812 GAGTTGGTGCAGGTCCCT-ATT-ACCAGGGGGTGCCTGGAACATATTTTCCTCTT-AGGG 868
| |||||| ||| | ||| | || || || || ||||| || ||| || |||
Sbjct 599 GTGTTGGTTTTGGT-AATGATTGTGTA-GGAGTTCCCGGTACATACTTCCCT-TTGAGGA 655
Query 869 AAGGTGGAAGTGTCACAT-TGTACCAAGATGCACATGTACCTGAAGGGA-TGCTCCCGGG 926
|||| || || || || | |||| || ||||| ||||| ||| || | | || ||| |
Sbjct 656 AAGGCGGTAGGGTTAC-TCTGTATCAGGATGCTCATGTTGATGACGGTACT-CTTCCGAG 713
Query 927 AATAAAACTCGGA-AAT-GGAATGTGTTA-CGAACATGGAAAGTGTTGGCATGATATGTT 983
|| | || || | ||| | | || | ||||||| ||||| ||| | ||||||
Sbjct 714 TGTATATCT-TGATGGTGGGATTCAG-TATC-AACATGGTAAGTGCTGGGAGGATATGGC 770
Query 984 TCATGCCATTTGTCAAGCTAGACGTTTGATTTATATTACAGGCTGGTCAGTGTGGCATAA 1043
| |||| || | || || ||| | ||||||||||| ||||| |||||||| | |||
Sbjct 771 TGATGCAATAAGACAGGCAAGAAGGTTGATTTATATCACAGGTTGGTCAGTTTTCCATCC 830
Query 1044 TGTCAGGCTTGTTCG-GGATAAAG-AA-GATCCTTCTTCAGAATGTAGACTAGGTGAGCT 1100
|| ||||| ||||| | | || || ||||| | | ||| ||| | |||| || |
Sbjct 831 GGTTAGGCTGGTTCGTCG-T--AGCAATGATCCGAC--C-GAAGGTACATTAGGGGATTT 884
Query 1101 -CCT-AAGATCAAAGTCCCAAGAAGGTGTGAGAGTCCTGCTTTTGGTTTGGGACGACCCA 1158
| | ||| ||||| || ||||||||||| ||||| || ||||||| ||||| || |||
Sbjct 885 GCTTAAAG-TCAAA-TCTCAAGAAGGTGTTAGAGTGTTGGTTTTGGTGTGGGATGATCCA 942
Query 1159 ACTTC-ACAAAACATCTTGGGATACATGAC-CGATGGGGTTATGGGAAC-CCA-TGACGA 1214
||||| | | | || |||||| || || | | || ||||| |||| | | || ||
Sbjct 943 ACTTCAAGGAGTCTTC-TGGGATTCAAAACAC-AAGGAGTTAT--GAACACAAGCGATGA 998
Query 1215 GGAGACACGCCGTTTTTTCAAGGACTCCTCAGTGCAAG-TCTTGCTATG-CCCTCGAAAT 1272
|||||| ||||||||||||||| | || || ||||||| || | || || ||| || |
Sbjct 999 GGAGACTCGCCGTTTTTTCAAGCATTCGTCGGTGCAAGTTC-TCCTTTGTCCC-AGATCT 1056
Query 1273 -GCTGGAAAGCGACATAG-TTGGGTCAAACAGA-GGGAAGTTGGAACCATCTATACACAC 1329
| |||||| | || || || | ||| | | ||||||||||| ||||| || ||
Sbjct 1057 GGGGGGAAAG-GTCACAGCTT-CAT-AAAAAAATCTGAAGTTGGAACAATCTACACCCAT 1113
Query 1330 CACCaaaaaaaCT-TAATAGTAGATGCCGATGCTG-GGGGTAACAGAAGGAAA-ATCGTA 1386
|| | |||||||| | || ||||||| || || | | ||| ||| |||| ||||||
Sbjct 1114 CATC-AAAAAACTGTGATTTTAGATGCTGAAGCAGCTCAG-AACCGAA-GAAAGATCGTA 1170
Query 1387 GCTTTTGTGGGCGGGCTTGATCTATGTG--ATGGCCGATATGATACTCCTCAA-CATCCG 1443
|| ||||| || ||||| || || |||| | || |||| ||||||||| ||| ||| |
Sbjct 1171 GCATTTGTTGGAGGGCTAGA-CT-TGTGCAACGGACGATTTGATACTCC-CAAGCATTC- 1226
Query 1444 T-TGTTTAGGACACTGCAAACAGA-T-CATAATGGTGACTAT-CACAACCCCACTTTCAC 1499
| | ||||||||| | ||| | | | ||||| | ||||| | || ||||| | |||
Sbjct 1227 TCTCTTTAGGACA-T-TAAAGACACTCCATAAAGATGACT-TCCATAACCCAAATTTTGT 1283
Query 1500 GGGTAACGTGTCCGG-T---TGTCCAAGAGAACCTTGGCATGACT-TGCACAGTAAGATT 1554
| | || || ||| | | |||||||| || |||||||| | ||||||| ||||||
Sbjct 1284 GACT-AC-TG--CGGATGACGGACCAAGAGAGCCATGGCATGA-TCTGCACAGCAAGATT 1338
Query 1555 GATGGCCCAGCTGCGTATGATGTGC-TGACAAATTTTGAGGAGA-GGTGGCTGAAGGCTG 1612
||||| |||||||| |||||||||| || | ||||| ||||| | | ||| ||||||||
Sbjct 1339 GATGGTCCAGCTGCATATGATGTGCTTG-CTAATTTCGAGGA-ACGCTGGATGAAGGCTT 1396
Query 1613 CTAAGCCTCACAGAATCAATAAATTGAAGA-CGTCATATGATGATGCACTACTAAGGATC 1671
| || |||| | |||| ||| | || | | || | ||||||| | || || |||||
Sbjct 1397 CAAAACCTCGCGGAATTGGGAAACT-AAAATCTTCTTCTGATGATTCTCTGCTTAGGATA 1455
Query 1672 GACAGGATTCCAGATA-TATTAAGAGTTT-TGGATGCTCCTACTGTTAGTGCA-AACGAC 1728
||||| ||||| || | || | || ||| | || ||| || ||| || || | || ||
Sbjct 1456 GACAGAATTCCTGACATTA-TGGGACTTTCT-GAAGCTTCTTCTGCTAATG-ATAATGAT 1512
Query 1729 CCCGAGGCTTGGCATGTTCAGATTTTCCGGTCAATCGATTCAAACTCTGTGAAAGGTTTT 1788
|| ||| |||||||||||||| ||||||| ||||| ||||||| || || ||||| |||
Sbjct 1513 CCAGAGTCTTGGCATGTTCAGGTTTTCCGTTCAATTGATTCAAGTTCAGTCAAAGGGTTT 1572
Query 1789 CCAAAGGATCCAAAATATGCTACAAGCAAG-AAT-TTGGTGTGCGGTAAGAATGTGCTCA 1846
|||||||| ||||| | ||||| | ||| ||| || | || || |||||| | ||||
Sbjct 1573 CCAAAGGACCCAAAGGAAGCTAC-TGGAAGAAATCTT-CTATGTGGGAAGAATATTCTCA 1630
Query 1847 TTGACATGAGCATACACACCGCATATGTAAAGGCCATTCG-TGCAGCTCAACACTTCATC 1905
| || ||||||||||| | || || || ||||| || || | | ||||| ||||||||
Sbjct 1631 TAGATATGAGCATACATGCAGCTTACGTTAAGGCAATACGAT-CTGCTCAGCACTTCATT 1689
Query 1906 TACATCGAGAACCAGTA-TTTCATTGGATCCTCCTACGACTGGAATGCTCACAAGGACAT 1964
||||| |||||||| || |||| ||||||| || | | ||||| || | |||||||| |
Sbjct 1690 TACATTGAGAACCAATATTTTC-TTGGATCATCATTCAACTGGGATTCAAACAAGGACTT 1748
Query 1965 AGGTGCCAACAACCTGATTCCTATGGAAATTGCG-TTGAAGATTGCTGATAAGATCAGAG 2023
||||| || || || || || |||||||| ||| || ||||||||| ||||||| ||||
Sbjct 1749 GGGTGCTAATAATCTAATCCCGATGGAAATCGCGCTT-AAGATTGCTAATAAGATTAGAG 1807
Query 2024 CAAAGGAACGGTTTGCTGCATATATTGTCATTCCAATGTGGCCAGAAGGAGTTCCTACCG 2083
||| |||| ||||||||| ||||||||||||||||||||||||||||| | ||||||
Sbjct 1808 CAAGGGAAAAGTTTGCTGCTTATATTGTCATTCCAATGTGGCCAGAAGGTGCTCCTACAA 1867
Query 2084 GCG-CCGCTACACAAAGAATTCTATATTGGCAGCACAAGACGATGCAAATGATGTATGGA 2142
| || ||| ||||||||||| || ||||||||||| || ||||||||||||||| |
Sbjct 1868 GTAACC-CTATTCAAAGAATTCTCTACTGGCAGCACAAAACAATGCAAATGATGTATCAA 1926
Query 2143 ACTATCTACAATGCG-TTAGTGGAGGC-CGGGCTTGAAGATGAATACTCC-CCACAAGAC 2199
|| ||| |||| || || ||||| | || ||||| | | | | | |||||||||
Sbjct 1927 ACCATCCACAAGGCACTT-GTGGAAGTTCGT-CTTGATGGTCAGTT-TGAGCCACAAGAC 1983
Query 2200 TATTTGAA-TTTCTTCTGTCTTGGAAACC-GAGA 2231
| |||||| ||| ||||||||||||| || ||||
Sbjct 1984 TTTTTGAACTTT-TTCTGTCTTGGAA-CCAGAGA 2015
> Ahg931791 jgi|Araly1|931791|scaffold_304248.1
Length=1112
Score = 58.4 bits (31), Expect = 3e-07
Identities = 41/45 (91%), Gaps = 4/45 (9%)
Strand=Plus/Plus
Query 1926 CATTGGATCCTCCTACGACTGGAATGCT--C--ACAAGGACATAG 1966
|||||||||||||||||||||||||||| | ||||||||||||
Sbjct 50 CATTGGATCCTCCTACGACTGGAATGCTAGCTCACAAGGACATAG 94
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 105052895710
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5