BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G01290.1
Length=3786
Score E
Sequences producing significant alignments: (Bits) Value
Ahg490443 jgi|Araly1|490443|fgenesh2_kg.6__3577__AT4G01290.2 3197 0.0
> Ahg490443 jgi|Araly1|490443|fgenesh2_kg.6__3577__AT4G01290.2
Length=3694
Score = 3197 bits (1731), Expect = 0.0
Identities = 2097/2263 (93%), Gaps = 67/2263 (3%)
Strand=Plus/Plus
Query 281 GAATCCGATACGAGAGATTAAAGCCTTGTGAGTTTAGGATGAGCTAG-TTTTCTTTGGCT 339
||||||||||||||||||| |||||| ||| ||||||||||||||| |||| ||||| |
Sbjct 252 GAATCCGATACGAGAGATT--AGCCTTCTGACTTTAGGATGAGCTAGTTTTTTTTTGGTT 309
Query 340 TTGAGCTGTAA-TTTCTCTTCTCTGAAATCTTTCACTGTACATATAGCTAGATCCTGATG 398
|| ||||| || |||||| | || |||||| ||||||||||||||||| ||| |||||
Sbjct 310 TTTAGCTGAAATTTTCTCCAGT-TG-AATCTTACACTGTACATATAGCTAAATCGTGATG 367
Query 399 AAGTTGCGTGGTGGTGAATCGTGGTTTAAGTTTTGCTAGTTGAGATATTATTGGTGGTTA 458
|| || || | | |||| ||||||| |||||||||||||||||
Sbjct 368 AA--------GT--TG---C------T---TTTT-CTAGTTGGGATATTATTGGTGGTTA 404
Query 459 CTGTAATATCGAAGA--AT-CATATTTCACGGTATTTACTATAGACAACTACTGTAGAGT 515
| || | | ||||| | | | ||| ||| ||||||||||||||||||||||||||
Sbjct 405 C--TATTTTAGAAGATTTTGCGT-TTTGGGGGTGTTTACTATAGACAACTACTGTAGAGT 461
Query 516 TACTTGATTAAGGCGTTAAGAAGAGATACTGGTGTTTTTTGGCCTCAATCAGCTAAGATT 575
|||||| | || ||||| ||||||||||| || |||||||||||||||||||
Sbjct 462 TACTTG----A----TT---AAGAGTTACTGGTGTTTCTTCGCCTCAATCAGCTAAGATT 510
Query 576 TT-T-----G--TGCATTGTATGATGAGTATAGCAAATGAACAACAATTTGCCATGGATC 627
|| | | |||||||||| |||||| |||||||||||||||| |||||||||||||
Sbjct 511 TTGTGCGCCGCCTGCATTGTATCATGAGTTTAGCAAATGAACAACAGTTTGCCATGGATC 570
Query 628 AACTTGTCGAAACCAATGATGATTCGGAAAAGAAACCAAGAATTACATACACGAGGAAGT 687
|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 571 AACTTGGCGAAACCAATGATGATTCGGAAAAGAAACCAAGAATTTCATACACGAGGAAGT 630
Query 688 TTCT-TATATCCTTGAGCGAGAAAGACGTTTGCAAGAAGCTGCCAAATCTGCCTGGTGAA 746
|||| | ||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 631 TTCTCT-TATCCTTGAGCGAGAAAGACGTTTGCAAGAAGCTGCCAAATCTACCCAGTGAA 689
Query 747 TTTGATGAAGCACTGTTGCTTGACTTCGAAGATCCTTCACCCGAGCGAGCAAGAATTTCA 806
|||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 690 TTTGATGAAGCACTGTTGCTAGACTTCGAAGATCCTTCACCCGAGCGAGTGAGAATTTCA 749
Query 807 GGCGATTTTTCGTCGCATGGTTTCAGGCGGAATGACTATAGTTCATCGCCTCCCACCAGG 866
||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 750 GGCGATTTTTCATCCCATGGTTTTAGGCGGAATGACTATAGTTCATCGCCTCCCACCAGG 809
Query 867 GGGGAATTAGGTACTAACTCTCGAGGCACCCATGGAAGATGGGAAGGGCGCTCTGGTGGA 926
|| |||||||||| |||||||||||||| ||||||||||||||| |||||||| ||||||
Sbjct 810 GGTGAATTAGGTAGTAACTCTCGAGGCATCCATGGAAGATGGGAGGGGCGCTCAGGTGGA 869
Query 927 TGGAATGATAAAGATAGTGATTCACAGTCAGACCGGGACTCAGGAGAGCCTGGAAGGCGT 986
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 870 TGGAATGATAAAGATAGTGATTCACAGTCAGACCGGGACTC---AGAGCCTGGAAGGCGT 926
Query 987 TCTGGTATGCCATCTCGGAGGTCTTGGCAAGCACCTGAGCATGATGGACTTCTT-GGGAA 1045
||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||
Sbjct 927 TCTGGTATGCCATCTCGGAGGCCTTGGCAAGCACCTGAGCATGATGGACTT-TTGGGGAA 985
Query 1046 AGGTTCTTTCCCTAAGCCTTCTGGATTTGGTGCGGGAACATCTGCCCCTAGACCTCAATC 1105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 986 AGGTTCTTTCCCTAAGCCTTCTGGATTTGGTGCGGGAACATCTGCCCCTAGACCTCAATC 1045
Query 1106 TAATGACTCACATCAGCTGAGTAGAACCAATGAACCTTACCATCCTCCTCGCCCATACAA 1165
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1046 TAATGACCCACATCAGTTGAGTAGAACCAATGAACCTTACCATCCTCCTCGCCCATACAA 1105
Query 1166 GGCGCCACCTTTCACTAGACGTGACGCTAGAGATTCATTCAATGATGAAACATTTGGTTC 1225
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 1106 GGCGCCACCTTTCACTAGACGTGACACTAGAGATTCATTCAATGATGAAACATTTGGCTC 1165
Query 1226 TTCTGATTCTACTAGTGAAGATAGAGCagaagaagaaagaaaaagaagaGCTTCTTTTGA 1285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1166 TTCTGATTCTACTAGTGAAGATAGAGCAGAAGAAGAAAGAAAAAGAAGAGCTTCTTTTGA 1225
Query 1286 GTTGTTGAGGAAGGAACATCAAAAAGCATTCCAGGAGAGACAAAAATCAAACCCAGACTT 1345
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1226 GTTGTTGAGGAAGGAACATCAAAAAGCATTCCAGGAGAGGCAAAAATCAAACCCAGACTT 1285
Query 1346 ACGCAAAAACGACTTTGATTTTACTGAACTTCTTGGGGAGTCCAAAGATGATAAAGGGCG 1405
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 1286 ACGCAAAAACGACTTTGATTTTACTGAACTTCTTGGGGAGTCTAAAGATGAAAAAGGGCG 1345
Query 1406 TCCAAGTAGAAGTGATGAAGTCAATCACGCTCCAACAATTCCTGGTTCTAGTAACACCTC 1465
|||||||||||| ||||||||||||||| |||||| |||||||||||||| |||||||||
Sbjct 1346 TCCAAGTAGAAGCGATGAAGTCAATCACACTCCAATAATTCCTGGTTCTAATAACACCTC 1405
Query 1466 TTTGCCTTCTCAAAGTAATGCACCCAGACCGCTTGTACCTCCTGGTTTTGCAAGCACAAT 1525
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1406 TTTTCCTTCTCAAAGTAATGCACCCAGACCGCTTGTACCTCCTGGTTTTGCAAGCACAAT 1465
Query 1526 TTTGGaaaaaaaGCAAGGGGAAAAACCTCAAACTGAAACTTCTCAATATGAGCGGAGTCC 1585
|||||||||||||| ||||||||||||||||| ||| |||||||||||||||| |||||
Sbjct 1466 TTTGGAAAAAAAGCCAGGGGAAAAACCTCAAATTGATTCTTCTCAATATGAGCGTAGTCC 1525
Query 1586 TTTAAATTCCAAAGGCATTAATGTGGTGAATGGAACATCAGTTAATAATGGGGGAAAACC 1645
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1526 TTTAAATTCCAAAGGCATTAATGTGGTGAATGGAACATCTGTTAATAATGGGGGAAAACC 1585
Query 1646 GTTGGGAATTAAGATAGGTTCAAGTGAGATGCTAATAGAAGGTGAAGATGTTCGTGTCTC 1705
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 1586 GTTGGGAATTAAGATAGGTTCAAGTGAGATGCTGATAGAAGGTGAAGATGTTCGTGTTTC 1645
Query 1706 CTCCACTGATGCAAATGAACGGGCTGTTAATATCTCTTCACTTCTAGGAATATCTACAGA 1765
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1646 CTCCACTGATGCAAATGAACGGGCTGTTAATATCTCTTCATTTCTAGGAATATCTACAGA 1705
Query 1766 TACAGTTAATAAGGATAAAAGTTTTGAAAAGCTTTCCTCGATCTCGACTCCTACTGAAAT 1825
|||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||
Sbjct 1706 TACAGTTAATAAGGATAAAAGTTTTGAAAAGCTTTCGTCAATCTCAACTCCTACTGAAAC 1765
Query 1826 TCAGGGGTATCCTATAAAAAGTGAGAAAGCTACAATGACGCTGGGCAAGAAGAAAAGCTT 1885
|||||||||||||| |||||||||| |||||||||||| ||||| |||||||||||||||
Sbjct 1766 TCAGGGGTATCCTAGAAAAAGTGAGCAAGCTACAATGATGCTGGACAAGAAGAAAAGCTT 1825
Query 1886 GGAGCATT-CAGATGGGCCATCAATTCTGGATAAGATATTCAACACGGCTATAAATTTGA 1944
|||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1826 GGAG-ATTTCAGATGGGCCATCAATTCTGGATAAGATATTCAACACTGCTATAAATTTGA 1884
Query 1945 ATAGTGGTGACTCCTCTAATATGAATAAGAAAAATGTCGAAAAAGTAGAAGAAATACGAA 2004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1885 ATAGTGGTGACTCCTCTAATATGAATAAGAAAAATGTCGAAAAAGTAGAAGAAATACGAA 1944
Query 2005 GCCCTCAGACCATTAATAAATCCTCCAAGTTCGCTCATCTATTTCTTGAAGAAGATAACA 2064
|| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1945 GCTCTCAGACCATTAATAAATCCTCCAAGTTCGCACATCTATTTCTTGAAGAAGATAACA 2004
Query 2065 AACCAGTCGAAG-TTCTCCCATCCAGCGAGCCACCAAGAGGCTTACTGTCACTACTTCAA 2123
|||||||||||| || |||||||||||| | |||||||||||||||||||||||||||||
Sbjct 2005 AACCAGTCGAAGATT-TCCCATCCAGCGGGACACCAAGAGGCTTACTGTCACTACTTCAA 2063
Query 2124 GGTGCAGATAAATTGCAAACATTTGACACAAAAGCAAATCCCGACCTTTCAACGGATTTT 2183
|||| ||||||||||||||| |||||||||||||||||| |||| ||| |||||||||||
Sbjct 2064 GGTGGAGATAAATTGCAAACCTTTGACACAAAAGCAAATGCCGAACTTCCAACGGATTTT 2123
Query 2184 CCTTTTCAAGGCCATGCCACTAAAAGAACTGATCAGTTAAGCAGCACTTCCACAACTAAA 2243
||||||||||||||||| |||||||| || |||||||||||||||||||| |||| ||||
Sbjct 2124 CCTTTTCAAGGCCATGCGACTAAAAGCACCGATCAGTTAAGCAGCACTTCGACAAGTAAA 2183
Query 2244 TCAGTAACAGCTGTTCCACCTGTTCTCACTTGTGAAGACCTTGAGCAGTCTATTCTGTCA 2303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2184 TCAGTAACAGCTGTTCCACCTGTTCTCACTTGTGAAGACCTTGAGCAGTCTATTCTGTCA 2243
Query 2304 GAAGTCGGTGACAGCTATCATCCACCTCCACCGCCAGTTGACCAAGACACGAGTGTTCCT 2363
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2244 GAAGTTAGTGACAGCTATCATCCACCTCCACCGCCAGTTGACCAAGACACGAGTGTTTCT 2303
Query 2364 TCAGT-AAAAATGACCAAACAACGGAAAACATCTGTTGATGACCAGGCTTCGCAGCACCT 2422
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2304 TCAGTGAAAAA-GACCAAACAACGGAAAACATCTGTTGATGACCAGGCTTCGCAGCACCT 2362
Query 2423 TCTTTCTTTATTACAGAGAAGTTCAGACCCAAAAAGTCAAGATACGCAGCTACTTTCAGC 2482
||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||
Sbjct 2363 TCTTTCTTTATTACAGAGAGGTGCAGACCCAAAAATTCAAGATACGCAGCTACTTTCAGT 2422
Query 2483 TACAGAGAGGAGACCACCACCACCATCTATGAAAACAACTACA 2525
|||||||||||||||||||||||||||| ||||| ||| ||||
Sbjct 2423 TACAGAGAGGAGACCACCACCACCATCTGTGAAATCAAATACA 2465
Score = 1988 bits (1076), Expect = 0.0
Identities = 1206/1267 (95%), Gaps = 15/1267 (1%)
Strand=Plus/Plus
Query 2524 CACCACCACCATCTGTGAAATCAACTACAGCTGGAGAAGCAGATCCAGGGAAGTCTTTGA 2583
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2437 CACCACCACCATCTGTGAAATCAAATACAGCTGGAGAAGCAGATCCAGGGAAGTCTTTGA 2496
Query 2584 CTCTTGAGAATTTATTTGGGAGTGCCTTCATGAACGAACTGCAGTCGATTGGAGAACCTG 2643
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2497 CTCTTGAGAATCTATTTGGGAGTGCCTTCATGAACGAACTGCAGTCGATTGGAGAACCTG 2556
Query 2644 TCTCTGGAAGAGCTATGGTTTCTGATGCTCCAGGGGTCCCGCTTCGATCAGAAAGGTCAA 2703
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2557 TCTCTGGACGAGCTATGGTTTCTGATGCTCCAGGGGTCCCACTTCGATCAGAAAGGTCAA 2616
Query 2704 TTGGTGAACTGAGCCAAAGAAACCAAATCAGACCTGACGGTCCCCCCGGAGGGGTACTAG 2763
|| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 2617 TTATTGAACTGAGCCAAAGAAACCAAATCAGACCTGACGGTCTCCCCGGAGGGATACTAG 2676
Query 2764 CCCTTCCAGAAGATGGTAACTTACTTGCAGTTGGCGGTCATGCAAACCCATCAAAATACA 2823
|||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||
Sbjct 2677 CCCTTCCAGAAGATGGTAACTTGCTTGCGGTTGGCGGTCATGCAAACCCACCAAAATACA 2736
Query 2824 TGTCTTTTCCAGGATCTCATAATCAAGAGCCTGAAGTAGCTTTCAACATCTCTGACAAGT 2883
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2737 TGTCTTTTCCTGGATCTCATAATCAAGAGCCTGAAGTAGCTTTCAACATCTCTGACAAGT 2796
Query 2884 TAGCTGCCTTGAACTCTGGTCCAAGGAACGAAAGACCAACAATGGGTGGTCAAGATGGTC 2943
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2797 TAGCTGCCTTAAACTCTGGTCCAAGGAACGAAAGACCAACAATGGGAGGTCAAGATGGTC 2856
Query 2944 TTTTTCTCCACCAACATCCCCAACAATACGTGACCAACCCCTCGTCTCACTTGAATGGTT 3003
||||||||||| |||||||||||||||| |||| ||||||| ||||||||||||||||
Sbjct 2857 CTTTTCTCCACCGCCATCCCCAACAATACGCGACCGACCCCTCTTCTCACTTGAATGGTT 2916
Query 3004 CAGGCCCAGTATTCCATCCGTTCGATTCACAACATGCTCATGTAAAACCTCAGCTCGATT 3063
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2917 CAGGCCCAGTATTCCATCCGTTCGATTCACGACATGCTCATGTAAAACCTCAGCTCGATT 2976
Query 3064 TCATGGGACCAGGAAGCACT-ATGTCTCAACATCATGACCCTCCACCAAATCACCGGTTT 3122
|||| ||||||||||||| | ||| ||||||||||||||||||||||||||||||| |||
Sbjct 2977 TCATTGGACCAGGAAGCA-TCATGGCTCAACATCATGACCCTCCACCAAATCACCGATTT 3035
Query 3123 CCACCAAACATGATTCACCGTCCACCTTTCCATCATACACCAACCAGTGGACATCCCGAG 3182
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 3036 CCACCAAACATGATTCACCGTCCACCTTT---TCATACACCAACCAGTGGACATCCCGAG 3092
Query 3183 TTTGATCGTCTTCCTCCACATATGATGCAGAAGATGCATATGCAAGACAACCTGCAACAT 3242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3093 TTTGATCGTCTTCCTCCACATATGATGCAGAAGATGCATATGCAAGACAACCTGCAACAT 3152
Query 3243 CATCATCTAATGCAAGGATTCCCCGGTAGTGGTCCACAACCCCATCACTCTCCTCATGTA 3302
||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||
Sbjct 3153 CATCATCTAATGCAAGGATTCCCCGGTGGTGGTCAACAACACCATCACTCTCCTCATGTG 3212
Query 3303 AACAACCAGATGCCGGGTCTCATTCCTGAGTTAAACCCGTCACAAGGCTTTCCCTTTGCC 3362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3213 AACAACCAGATGCCGGGTCTCATTCCTGAGTTAAACCCGTCACAAGGCTTTCCCTTTGCC 3272
Query 3363 CATCGCCAGCCCAACTACGGTATGCCACCACCAGGTTCTCAAGTCAACAGAGGAGAGCAT 3422
|||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 3273 CATCACCAACCCAACTACGGTATGCCACCACCAGGTTCTCAAGTTAACAGAGGAGAGCAT 3332
Query 3423 CCAGCTTCACTGCAGACACTCTTGGGGATTCAGCAGAGGATGGACCCAGCCAAACAGATA 3482
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 3333 CCAGCTTCACTGCAGACACTCTTGGGGATTCAGCAGAGGATGGACCCAGCCAAGCAGATA 3392
Query 3483 CCGGCAGTGGGTCAAGCCGGTGGTCCTAATCGTCAAGGCTCTGTGGGTCATGAACTCGAC 3542
||||||||||| |||||||||||||||||||| ||| ||||| |||||||||||||||||
Sbjct 3393 CCGGCAGTGGGACAAGCCGGTGGTCCTAATCGCCAAAGCTCTATGGGTCATGAACTCGAC 3452
Query 3543 CTTGGGTTTGGCTACAGGTAACTTTGCTCTGGCCACAATCCTTTTTAACACCCTAAGAGG 3602
||||||||||||||||||||||| | ||||||||| | |||||| ||||||||||||||
Sbjct 3453 CTTGGGTTTGGCTACAGGTAACTCTACTCTGGCCATAGTCCTTT--AACACCCTAAGAGG 3510
Query 3603 TGTGTCTACCTAACAGTGAGTTGCTTTGTGATGTGCAAGTAATCAAAATTACCATTTGTG 3662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3511 TGTGTCTACCTAACAGTGAGTTGCTTTGTGATGTGCAAGTAATCAAAATTACCATTTGTG 3570
Query 3663 ATAttttttttAAGAACaaaaaaaaaaagaaaaa-aaaaa-TA-TATACTTT--GTCTCT 3717
|||||||||| ||||| |||||||||| |||||| ||||| || |||||||| ||| ||
Sbjct 3571 ATATTTTTTT-AAGAA-AAAAAAAAAA-GAAAAAGAAAAAATAATATACTTTCTGTCACT 3627
Query 3718 ATGGACTCTCGTTTCTCTTGGTGCTTGTGATATGGGGATGCTTTTAATTAACAGTAGTTG 3777
||| |||||||||||||||||||||||||||||||| |||||||||||||||| | || |
Sbjct 3628 ATGAACTCTCGTTTCTCTTGGTGCTTGTGATATGGGAATGCTTTTAATTAACAATGGTAG 3687
Query 3778 ATTTTCT 3784
|||||||
Sbjct 3688 ATTTTCT 3694
Score = 274 bits (148), Expect = 4e-72
Identities = 202/226 (89%), Gaps = 11/226 (5%)
Strand=Plus/Plus
Query 3 TCATCAATCGATCAAAACAAACAGCAACAGCAAAATTATCTTTCTGCAGATCGAAACCCT 62
||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||
Sbjct 1 TCATCAATCGATCAAAA-ACACAGCAAGAGCAAAATTATCTTTCTGCAGATCGAAACCCT 59
Query 63 AATTGGTTTCTCCGTTCTCCTTTTGTTCTTCTAGAATCGGCGACTCTTACtttt-tttt- 120
||||| |||||||||||||||||| || |||||||||| ||||||||| |||| ||||
Sbjct 60 AATTGTTTTCTCCGTTCTCCTTTTTTT-TTCTAGAATCCGCGACTCTTTTTTTTGTTTTT 118
Query 121 -------CTTTCTAATTATCCTTTTCTGATGGATTCTGGAATCCATGTAATTCCCCATTA 173
||||||| ||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 119 TTTGTTTCTTTCTATTTATCTTTTTCTGATGGATTCTGGAATCCTTGTAATTCCCCATTA 178
Query 174 GCGCTAAAAACCCTAGCTGTCGAAGACCTTAGATTACTGCAGAAAT 219
||| |||||||||||||||||||||||||||||||| | |||||||
Sbjct 179 GCGTTAAAAACCCTAGCTGTCGAAGACCTTAGATTAGTTCAGAAAT 224
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 143058416907
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5