BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G02110.1
Length=4095
Score E
Sequences producing significant alignments: (Bits) Value
Ahg895796 jgi|Araly1|895796|Al_scaffold_0006_3792 4698 0.0
> Ahg895796 jgi|Araly1|895796|Al_scaffold_0006_3792
Length=3942
Score = 4698 bits (2544), Expect = 0.0
Identities = 2977/3180 (94%), Gaps = 54/3180 (2%)
Strand=Plus/Plus
Query 964 AATTACGTGTCCCCCATTAGGGTTGCAAACAAGACTCCTGAGCAAGGGATGAGCAAAATG 1023
||||| ||||||||| |||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 769 AATTATGTGTCCCCCGTTAGGGTTGCAAACAAGACTCCTGAGCAAGGGATAAGCAGAATG 828
Query 1024 GAGACTGATGGCTCGACGTCTATTAACAGGAGTATCAGAAGGCATTCTTCTCTAGCCACT 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 829 GAGACTGATGGCTCGACGTCTATTAACAGGAGTATCAGAAGGCATTCTTCTCTAGCCACT 888
Query 1084 TATTCAAGGAAAACACTTCAGAGATCGCCAGAGACTGATACTTTGGGAAAAGAGTCAAGT 1143
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 889 TATTCAAGGAAAACACTTCAGAGATCGCCAGAGACAGATACTTTGGGAAAAGAGTCAAGT 948
Query 1144 GGCCAAAACCGTTCCTTGAGAATGGATGACAAGGGCCTAAAAGCTTCGTCTGCCTTTAAT 1203
||||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||| |
Sbjct 949 GGCCAAAACAGTTCCCTGAGAATGGATGACAAGAGCCTAAAAGCTTCGACTGCCTTTAGT 1008
Query 1204 ACCTCTGCATCAAAATCTGGTTCTTCCATGGAAAGAACGTCACTCTTTCG-AGATCTTGG 1262
| ||||||||||||||||||||||| ||||||||||| ||||||||| | ||||||||
Sbjct 1009 ATCTCTGCATCAAAATCTGGTTCTTTTATGGAAAGAACATCACTCTTT-GAAGATCTTGA 1067
Query 1263 CAAGATTGATATGTTGCATGGCGAGGAGTTCCCTCCGATGATGCCTCAGGCAAAATTTAC 1322
||||||||||||||||||||| ||||||||||||||||||||||| ||| | ||||||||
Sbjct 1068 CAAGATTGATATGTTGCATGGGGAGGAGTTCCCTCCGATGATGCCACAGCCGAAATTTAC 1127
Query 1323 AGATGGATCTGTCAGTAGGAAAGATTCACTGAGAGTACACCACAACAGTGAGGCAAGTAT 1382
||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||
Sbjct 1128 AGATGGATCTGTCAGTAGGAAAGATTCACAGAAAGTACACCACAACAGTGAGACAAGTAT 1187
Query 1383 TCCACCACCGTCTAGTTTGTTATTGCAGGAACTAAGACCAAGTTCGCCTAACGACAACCT 1442
||||| |||| ||||| |||||||||||||| |||||||||||||||||||||| |||||
Sbjct 1188 TCCACAACCGCCTAGTCTGTTATTGCAGGAATTAAGACCAAGTTCGCCTAACGAAAACCT 1247
Query 1443 TAGGCCTGTGATGAGCATTAGTGACCCAACTGAAAGTGAGGAAGCTGGCCATAAATCACC 1502
||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1248 TAGGCTTGTGATGAGCATTAGTGATCCAACTGAAAGTGAGGAAGCTGGCCATAAATCACC 1307
Query 1503 CACGAGTGAGTTAAACACTAAACTGTTGAGCTCTAATGTGGTACCCATGGTCGATGCTCT 1562
| ||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||
Sbjct 1308 CGCGAGTGAGTTAAACACTAAACTGTTGAGCTCAAATGTGGTACCCGTGGTAGATGCTCT 1367
Query 1563 TTCAACTGCGGAGAATATCATTTCAAATTGTGCGTGGGATGAAATACC---G-GA---GA 1615
||||||||| ||||||||||||||||||||||| ||||||||||||| | || ||
Sbjct 1368 TTCAACTGCAGAGAATATCATTTCAAATTGTGCACGGGATGAAATACCGGAGAGATCGGA 1427
Query 1616 -A-ATCATTGACTGAGAGAATGACAGAAAATGTCTTATTGCAGGAACAAAGATCAGGCTC 1673
| ||||| |||||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct 1428 GAGATCATGGACTGAGACAATGACAGGAAATGTCTTATTGCAGGAACCAAGATCAGGCTC 1487
Query 1674 ACCTAAGCAAAACCTTAGTGTTGTG------C-CA---A--AC-CT-----CAGGGAAGC 1715
|||||||||||||||||| |||||| | || | || || |||||||||
Sbjct 1488 ACCTAAGCAAAACCTTAGGGTTGTGCCAAACCTCAGTGACCACACTGAAAGCAGGGAAGC 1547
Query 1716 TGCACATGAGTTGGATCTGAGTGATTCAGCAGCTAGGTTGTTCAATTCAGGTGTTGTTCC 1775
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1548 TGCACATAAGTTGGATCTGAGTGATTCAGCAGCTAGGTTGTTCAATTCAGGTGTTGTTCC 1607
Query 1776 CATGGAAGCTGATATCAGAACTCCAGAAAATTCTACTATGAAGGGTGCATTGGATGAAGT 1835
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1608 CATGGAAGCTGATATTAGGACTCCAGAAAATTCTACTATGAAGGGTGCATTGGATGAAGT 1667
Query 1836 ACCTGAAAGATCTGTAACTGACCCTGTGATGAGGAGATCTAGCACCTCTCCTGGATCGGG 1895
|||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 1668 ACCTGAAATATCTGTAACTGAGCCTGTGATGAGGAGATCTAGCACCTCTCCTGGGTCGGG 1727
Query 1896 TTTAATCAGAATGAAAGACAAGCAAGAAACAGAGCTGACCACGAAGAAAACAGCTCCAAA 1955
|||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct 1728 TTTAATTGGAATGAAAGACAAGCAAGAAACAGAGCTGCCCAAGAAGAAAACAGCTCCAAA 1787
Query 1956 AAAGAGCCTAGGCACCAGAGGCAGGAAGAAGAACCCCATTAACCAAAAGGGATCAATATA 2015
||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||
Sbjct 1788 AAAGAGCCTAGGCACCAGAGGCAGGAAAAAGAACCCCATGAACCAAAAGGGATCGATATA 1847
Query 2016 CTTGAGCGAACCTTCCCCAACGGACGAGCGCAATGTTTGTCTAAACAAAGGAAAAGTTTC 2075
||||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||||||
Sbjct 1848 CTTGAGCGAACCTACCCCAAAGGATGAGCGCAATGATTGTCTAAACAAAGGAAAAGTTTC 1907
Query 2076 AGCGCCAGTAACAGGTAATAGCAATCAAAAAGAGATATCAAGCCCTGTCCTAAATACTGA 2135
||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||
Sbjct 1908 AGCGCCAGTAACAGGTAATAGCAATCAGAAGGAGATATCAAGCCCTGTTCTAAATACTGA 1967
Query 2136 GGTTGTACAAGACATGGCAAAACATATTGACACAGAGACTGAAGCCC-TCCAGGGAATTG 2194
|||||||| ||| |||||||||||||||||| ||||||||||||||| || |||||||||
Sbjct 1968 GGTTGTACCAGAAATGGCAAAACATATTGACTCAGAGACTGAAGCCCATC-AGGGAATTG 2026
Query 2195 ACTCTGTAGATAATAAATCTTTAGCCCCAGAAGAGAAAGACCATCTTGTGTTGGATCTGA 2254
| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 2027 ATTCTGTAGATAATAAATCTTTAGCGCCAGAGGAGAAAGACCATCTTGTGTTGGATCTGA 2086
Query 2255 TGGTGAACCAAGATAAGCTGCAGGCTAAGACCCCAGAGGCA-GCTGATGCAGAGGTGGAA 2313
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 2087 TGGTGAACCAAGATAAGCTGCAGGCTAAGACCCCAGAG-CAAGCTGATGCAGAGGTGGAA 2145
Query 2314 ATTACGGTGCTAGAACGGGAGCTTAATGATGTTCCAACTGAAGATCCAAGTGATGGTGCA 2373
||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |
Sbjct 2146 ATTACGGTGCTAGAACGGGAGTTTAATGATGTTCCAACTGAAGATCCAAGTGAGGGTGTA 2205
Query 2374 TTACAATCCGAGGTTGATAAGAATACAAGTAAACGCAAAAGGGAGGCTGGTGTAGGTAAA 2433
||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2206 TTACAATTAGAGGTTGATAAGAATACAAGTAAACGCAAAAGGGAGGCTGCTGTAGGTAAA 2265
Query 2434 AATAGCCTTCAAAGAGGGAAGAAAGGAAGTTCTTTTACAGCCAAAGTAGGAAAATCCAGA 2493
||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 2266 GATAGCCTTCAAAGTGGGAAGAAAGGAAGTTCTTCTACAGGCAAAGTAGGAAAATCCAGT 2325
Query 2494 GTCAAGAAGACCAAAATATCTAGAAAAGAAAATGATATCAAAGCAAATGGTACTCTGATG 2553
|||||||||||||||| ||||| ||||||| |||||| ||||||||| ||||||||| |
Sbjct 2326 GTCAAGAAGACCAAAAAATCTAAAAAAGAACATGATACCAAAGCAAACAGTACTCTGACG 2385
Query 2554 AAAGATGGAGGGGATAACTCTGCGGATGGGAAGGAGAACTTAGCATTGGAACATGAAAA- 2612
|||||| ||||||||| ||||||||||||||||||||||||||||| |||||| ||||
Sbjct 2386 AAAGATATAGGGGATAAATCTGCGGATGGGAAGGAGAACTTAGCATTTGAACAT-AAAAC 2444
Query 2613 TGGGAAGGTCAGTTCTGGTGGAGACCAAAGCCTTGTTGCGGGGGAAACATTAACAAGAAA 2672
|| ||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||
Sbjct 2445 TGTGAAGGTCAGTTCTGGTGGAGACCAAAGCCCTGTTGCGGGAGAAACATTAGCAAGAAA 2504
Query 2673 GGAAGCTGCCACTAAAGATCCAAGCTATGCTGCAGCGCAATTAGAGGTTGATACAAAGAA 2732
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||
Sbjct 2505 TGAAGCTGCCACTAAAGATCCAAGCGATGCTGCAGTGCAATTAGAGGTTGATACAAATAA 2564
Query 2733 AGGTAAACGCAGAAAGCAGGCCACTGTAGAAGAAAATAGGCTTCAAACACCTAGTGTCAA 2792
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2565 AGTTAAACGCAGAAAGCAGGCCACTGTAGAAGAAAATTGGCTTCAAACACCTAGTGTCAA 2624
Query 2793 AAAGGCGAAAGTTTCTAAAAAAGAAGATGGCGCCAAAGCAAACAATACTGTGAAGAAAGA 2852
|||||||||| ||||||||||||||||||||||||||||||| |||||||| | ||||||
Sbjct 2625 AAAGGCGAAAATTTCTAAAAAAGAAGATGGCGCCAAAGCAAAGAATACTGTTATGAAAGA 2684
Query 2853 TATATGGATTCACTCTGCAGAAGTGAAGGAGAATGTAGCAGTAGATGA-AAATTGTGGAG 2911
|||||| |||||||||||||||| ||| |||||||||||||||||||| |||| |||||
Sbjct 2685 TATATGCATTCACTCTGCAGAAGCGAAAGAGAATGTAGCAGTAGATGAGAAATC-TGGAG 2743
Query 2912 ATGTCAGTTCTGATGGAGCTCAAAGCCTGGTTGTGGAGAAATCTTTAGCTAAAAAGGAGG 2971
||||||||||||||||||||||||||||||| | || |||||| ||||||||||| ||||
Sbjct 2744 ATGTCAGTTCTGATGGAGCTCAAAGCCTGGTCGCGGGGAAATCGTTAGCTAAAAAAGAGG 2803
Query 2972 CTGCAGCTAAGGATCCAAGTAATGCTGCAATGCAATTAGAGTTTGATGATAATAAATGTA 3031
||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||
Sbjct 2804 CTGCAGCTAAGGATCCAGGTAATGCTGCGATGCAATTAGAGTTTGATAATAATAAATGTA 2863
Query 3032 AACACGGAAAGGAGGGTATTGTAGAAAGAAGTAGCCTTCAAAGTGGAAAGAAAGGAAGTT 3091
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2864 AACACGGAAATGAGGGAATTGTAGAAAGAAGTAGCCTTCAAAGTGGAAAGAAAGGAAGGA 2923
Query 3092 CTTCTAGAGTTGAAGTAGGGAAATCAAGTGTCAAGAAGACTAAAAAATCTGAAAAAGGAA 3151
|||| | |||||||||||||||||| |||||||||||||||||||||||| ||||| |||
Sbjct 2924 CTTCGACAGTTGAAGTAGGGAAATCCAGTGTCAAGAAGACTAAAAAATCTAAAAAACGAA 2983
Query 3152 GTGGCACCGAAGCAACCGACACTGTGATGAAAGATGTAGGGGATAATTCTGCAAAAGAGA 3211
||||| || |||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct 2984 GTGGCGCCAAAGCAACCGACACTGTGATGAAAGATATAGGGGATAACTCTGCAAAAGAGA 3043
Query 3212 AGGAGAACATTGCAGTGGATAATGAATCTAGAAAGGTGGGATCTGGTGGAGACCAAAGCC 3271
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct 3044 AGGAGAACATTGCAGTGGATAATAAATCTAGAAAGGTGGGTTCTGGTGGAGACCAAAGCC 3103
Query 3272 CGGT---AG-----C-A--AG-AAA---GAAAGTTGCAAAGTCAGCTAAAACAGGTACAA 3316
|||| || | | || ||| ||||||||||||||||||||||||||||||||
Sbjct 3104 CGGTTTCAGGAAAACCATTAGCAAAAAAGAAAGTTGCAAAGTCAGCTAAAACAGGTACAA 3163
Query 3317 AGGCGGAGAAAGAGTCTAAGCAGCTCAGGGTTAATCCTTTGGCTAGTAGAAAAGTCTTCC 3376
||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 3164 AGGCGGATAAAGAGTCTAAGCAGCTCAGGGTTAATCCCTTGGCTAGTAGAAAAGTCTTAC 3223
Query 3377 AGGACCAAGAACATGAGCCGAAATTTTTTATTGTCAGTGGTCCTAGGTCCCAGAGAAACG 3436
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 3224 AGGACCAAGAACATGAGCCGAAGTTTTTTATTGTCAGTGGTCCTAGGTCCCAGAGAAACG 3283
Query 3437 AATACCAGCAGATCATTAGGCGTTTAAAAGGAAAATGTTGCCGGGATTCTCATCAGTGGT 3496
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3284 AATACCAGCAGATCATTAAGCGTTTAAAAGGAAAATGTTGCCGGGATTCTCATCAGTGGT 3343
Query 3497 CTTATCAAGCAACACATTTCATTGCTCCTGAAATCCGTAGGACCGAAAAGTTTTTCGCTG 3556
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 3344 CTTATCAAGCAACACATTTCATTGCTCCTGAAATCCGTAGGACTGAAAAGTTTTTCGCTG 3403
Query 3557 CTGCTGCATCTGGAAGTTGGATTCTGAAGACTGACTATGTGGCTGATTCAAAGGAAGCTG 3616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3404 CTGCTGCATCTGGAAGTTGGATTCTGAAGACTGACTATGTGGCTGATTCAAAGGAAGCTG 3463
Query 3617 GGAAACTATTACAAGAGGAGCCTTATGAATGGCACAGTTCTGGTCTTAGTGCTGATGGTG 3676
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3464 GGAAACTATTACAAGAGGAGCCTTATGAATGGCACAGTACTGGTCTTAGTGCTGATGGTG 3523
Query 3677 CGATAAACCTCGAGTCCCCAAAGAAATGGCGGCTCGTCAGGGAGAAAACAGGACACGGTG 3736
||||||||||||||||||||| ||||||||||||| |||||||| |||||||||| ||||
Sbjct 3524 CGATAAACCTCGAGTCCCCAAGGAAATGGCGGCTCTTCAGGGAGCAAACAGGACAGGGTG 3583
Query 3737 CTTTATATGGACTGCGCATTGTTGTATACGGTGACTGCACCATCCCTTG-TTTGGATACA 3795
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 3584 CTTTATATGGACTGCGCATTGTTGTATACGGTGACTGCACCATCCCT-GCTTTGGATACA 3642
Query 3796 CTAAAGCGAGCTGTGAAAGCTGGGGATGGTACGATACTTGCAACGGCGCCTCCTTACACG 3855
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 3643 CTAAAGCGAGCTGTGAAAGCTGGGGATGGTACGATACTAGCAACGGCGCCTCCATACACG 3702
Query 3856 CGTTTCTTGAATCAAAACACGGATTTCGCGTTGATAAGCCCCGGGATGCCGCGGGATGAC 3915
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 3703 CGTTTCTTGAATCAAAACACGGATTTCGCGTTGATAAGCCCCGGGATGCCGCGGGACGAC 3762
Query 3916 GTCTGGATCCAAGAGTTTATACGCCACGAAATCCCGTGTGTCCTCTCCGATTACCTGGTG 3975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3763 GTCTGGATCCAAGAGTTTATACGCCACGAAATCCCGTGTGTCCTCTCCGATTACCTGGTG 3822
Query 3976 GAGTACGTTTGTAAACCCGGATACGCACTTGACAAGCATGTGCTCTACAACACGAACTCA 4035
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 3823 GAGTACGTTTGTAAACCCGGATATGCACTTGACAAGCACGTGCTCTACAACACGAACTCA 3882
Query 4036 TGGGCAGAAAAGTCGTTTAACAAGATGCAGCTTAGAGCAGATTTGTGTGTGTACCATTAA 4095
|||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 3883 TGGGCAGAAAGGTCGTTTAACAAGATGCAGCGTAGAGCAGATGTGTGTGTGTACCATTAA 3942
Score = 481 bits (260), Expect = 2e-134
Identities = 352/392 (90%), Gaps = 23/392 (6%)
Strand=Plus/Plus
Query 574 GGAGAAAAGTATGAGCTAGCCAAGCGGATTAAGAGGATTAAACTTGTGAACCACCGTTGG 633
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 331 GGAGAAAAGTATGAGCTAGCCAAGCGGATTAAGAGGATTAAACTTGTGAACCACCGCTGG 390
Query 634 TTAGAGGACTGCTTAAAGAATTGGAAGCTCCTACCTGAGGTTGATTACGAGATAAGTGGC 693
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 391 TTAGAGGACTGCTTAAAGAATTGGAAGCTTCTTCCTGAGGTTGATTACGAGATAAGTGGC 450
Query 694 TATGAGTTGGACATAATGGAGGCTTCAGCTAGGGATTCTGAGGACGAAGCAGAAGATGCC 753
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 451 TATGAGTTGGACATAATGGAGGCTTCAGCTAAGGATTCTGAGGACGAAGCAGAAGATGCT 510
Query 754 TCTGTCAAGCCTGCAAATACCAGTCCTCTTGGTCTTAGGGTTGGTGCCGT-GCCTGCAGT 812
||||| |||| |||||| | ||| ||||||||||||||||| |||| ||| || ||||||
Sbjct 511 TCTGTGAAGCGTGCAAACAACAGCCCTCTTGGTCTTAGGGTCGGTGTCGTCGC-TGCAGT 569
Query 813 TGAAATCTCTAAGCCGGGAGGAAAAGATTTCCCTCTTG---A----------GG---A-A 855
|||||| ||||||||||||||||||||| ||||||||| | || | |
Sbjct 570 TGAAATGTCTAAGCCGGGAGGAAAAGATATCCCTCTTGTTCAAACAAATTCAGGCGCACA 629
Query 856 GG--G-T-CATCATTATGTAATACGTCCAAAGATAATTGGTTAACTCCTAAAAGGACGGA 911
|| | | ||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct 630 GGAAGGTTCATCATTATGTAATACGTCCAAAGACAATTGGTTAACTCCTAAAAAGACGGA 689
Query 912 CAGACCTTTTGAAGCAATGGTCTCTACTGATC 943
||||||||||||||| ||||||||||||||||
Sbjct 690 CAGACCTTTTGAAGCCATGGTCTCTACTGATC 721
Score = 477 bits (258), Expect = 3e-133
Identities = 308/332 (93%), Gaps = 4/332 (1%)
Strand=Plus/Plus
Query 138 GTATTCGGGTG-TCAAATTCGCTCTCGTTGGATTCAATCCCATCCATGGAAACTCGTTAC 196
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3 GTATTCGGGTGTTC-GATTCGCTCTCGTTGGATTCAATCCCATCCATGGAAACTCGTTAC 61
Query 197 GGTCGAAGCTAGTGAGTGGTGGTGGTGTTGATGTTGGCCAATTCACTCAGTCATGT-ACT 255
|||| ||||| |||||||||||||||||||| |||||||||| | |||| || | | |||
Sbjct 62 GGTCTAAGCTTGTGAGTGGTGGTGGTGTTGAAGTTGGCCAATACTCTCAATCCT-TAACT 120
Query 256 CACCTCATCGTAGATAAGCTTCTCTATGATGATCCGATTTGCGTTGCTGCTCGAAACAGC 315
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 121 CACCTCATCGTAGATAAGCTTGTCTATGATGATCCGATTTGCGTTGCTGCTCGAAACAGC 180
Query 316 GGGAAGGTAGTTGTCACCGGGTCATGGGTTGATCACAGCTTCGACATTGGAATGCTTGAC 375
|||||||| |||||||| |||||||||| |||||| |||||||||| |||||||||||
Sbjct 181 GGGAAGGTGGTTGTCACAGGGTCATGGGCTGATCAAAGCTTCGACACTGGAATGCTTGTT 240
Query 376 AATGCAAATTCGATATTGTATAGGCCTCTTAGAGATTTGAATGGGATTCCAGGGTCCAAA 435
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 241 AATGCAAATTCGTTATTGTTTAGGCCTCTTAGAGATTTGAATGGGATTCCAGGGTCCAAA 300
Query 436 GCCTTAGTTGTGTGCTTGACTGGCTACCAAGG 467
|||||||||||||||||||| || ||||||||
Sbjct 301 GCCTTAGTTGTGTGCTTGACCGGGTACCAAGG 332
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 154818206964
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5