BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G02480.1
Length=4287
Score E
Sequences producing significant alignments: (Bits) Value
Ahg490318 jgi|Araly1|490318|fgenesh2_kg.6__3452__AT4G02480.1 6359 0.0
Ahg470259 jgi|Araly1|470259|fgenesh2_kg.1__213__AT1G02890.1 3048 0.0
> Ahg490318 jgi|Araly1|490318|fgenesh2_kg.6__3452__AT4G02480.1
Length=4119
Score = 6359 bits (3443), Expect = 0.0
Identities = 3946/4178 (94%), Gaps = 77/4178 (2%)
Strand=Plus/Plus
Query 1 GATAtctctctgattcttcgattt---ctctttctctctctctcgc-t-ctatccttctc 55
|||||||||||||||||||||||| |||| ||||||| |||| | | || ||||||||
Sbjct 1 GATATCTCTCTGATTCTTCGATTTCGCCTCTATCTCTCTATCTC-CTTCCT-TCCTTCTC 58
Query 56 ctatctctaatctcttgtcttctctctctttctctaTCGGGAAACCAAGCGGCTCTTCTT 115
|||||||||||||| | || ||| |||| |||||||||||||||| |
Sbjct 59 CTATCTCTAATCTC-T-TC-TCT-TCTC--TCTCTATCGGGAAACC-A------------ 99
Query 116 TGGATCAAAGGCGAAGTCAAGGCGGAGAAAGAAAAGAGAGGGTCGTGAGATATGGTTGAG 175
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 100 ---A--AAAGGCGAAGTCAAGGCGGAGAAAGAAAAGAGAGGGTCGTGAGATATGGTTGAG 154
Query 176 ACGAGACGTAGCTCTTCCGCTTCCAAGCGTTTCTGTGCTTCTTCTTCTTCCCCTGAAGCA 235
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 155 ACGAGACGTAGCTCTTCCGCTTCCAAGCGTTTCTGTGCTTCTTCTTCTTCTCCTGAAGCT 214
Query 236 TCTTCTTCTCAAAGGCCTAACAAGCGATCTAAGGTTAAGATCGATGCCGCTGCTTCTTCT 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 215 TCTTCTTCTCAAAGGCCTAACAAGCGATCTAAGGTTAAGATCGATGCCGCTGCTTCTGCT 274
Query 296 CTCGAACCT---GCGACGGCGGAACCGGCTGGTTCTTCATCAGCGAGCGAAGTTCCGATC 352
||||| ||| ||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct 275 CTCGAGCCTGCGGCGGCGGCGGAACCGGCTGGTTCTTCATCAGCGAGCGAGGTTCCGATC 334
Query 353 GAGAATCAAGGACCTGCTTCGGATCCTGGATCGGAATCTGGAGAGCCGGAACTTGGATCT 412
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 335 GAGAATCAAGGACCTGCTTCGGATCCTGGATCGGAATCTGGAGAGCCGGAACTTGGATCC 394
Query 413 TCTGATCCACAGGCTATGGATGCGGAGAAGCCTGTTGTTACAACTGATGTCCCTGTGATG 472
|||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||
Sbjct 395 TCTGATCCACAGGCTATGGATGCGGACAAGCCTGTTGTTACCACTGATGTCCCGGTGATG 454
Query 473 GAGAACTCTCCTGAAACCGACGCTAACCCTGAAGTCGAAGTCTTGGCCACACCTACCGTA 532
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 455 GAGAACTCTCCTGAAACCGACGCTAACCCTGAAGTTGAAGTCTTGGCGACACCTACCGTT 514
Query 533 GCAGGTGAAGCGGTGGCGGATGCTGACAAATCTAAGGCGGCTAAGAAGCGAGCTTTAAAG 592
|||||||||| | ||||||||||||| ||||| ||||| ||||||||||| |||||||||
Sbjct 515 GCAGGTGAAGTGATGGCGGATGCTGAGAAATCCAAGGCTGCTAAGAAGCGGGCTTTAAAG 574
Query 593 GCTCCATGGGCGAAGCTACTTTCCCAGTATTCTCAGAATCCTCACCGTGTCATCAGAGGC 652
||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||
Sbjct 575 GCTCCATGGGCGAAGCTACTTTCCCAGTATTCTCAGACTCCTCACCGTATCATGAGAGGC 634
Query 653 CCTGTGTTTACTGTTGGACGCCGGGGATGTGATTTATCTATCAGAGACCAAGCTATGCCC 712
||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||
Sbjct 635 CCTGTGTTTACTGTTGGACGCAAGGGATGTGATCTATCTATCAGAGACCAAACTATGCCC 694
Query 713 AGCACCCTCTGTGAACTGAAGCAGTCTGAGCACGGTGGTCCATCAGTTGCATCCCTTGAG 772
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 695 AGCACCCTGTGTGAACTGAAGCAGTCTGAGCATGGTGGTCCATCAGTTGCATCCCTGGAG 754
Query 773 ATATTAGGAAATGGAGTTATTGTTCATGTCAATGGCAAGTGTTACCAGAAAAGTACTTGT 832
||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 755 ATAATAGGGAATGGAGTTATTGTTCAGGTCAATGGCAAGTGTTACCAGAAAAGTACTTGT 814
Query 833 GTTCATCTACGGGGTGGTGACGAGGTGATCTTCAGCCTTAATGGGAAACATGCTTATATA 892
|||||||||||||||||||| ||||||||||||||| || || ||||||| ||||||||
Sbjct 815 GTTCATCTACGGGGTGGTGATGAGGTGATCTTCAGCATTGCTGCGAAACATTCTTATATA 874
Query 893 TTTCAACCTGTTAAAGATGAAAATTTAGCAGCTCCTGACAGAGCTTCTTCGTTGAGTATA 952
||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct 875 TTTCAACCTCTTAAAGATGAAAATCTAGCTGCTCCTGACAGAGCTTCTTCGTTGAGTATA 934
Query 953 TGTGAAGCTCGGGGTGCCCCTCTGAAAGGGGTTCATGTCGAGACAAGGGCAGGAGATGTT 1012
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 935 TGTGAAGCTCGTGGTGCCCCTCTGAAAGGGGTTCATGTCGAGACAAGAGCAGGAGA---- 990
Query 1013 GATGGGGCCTCAGATGTTGATGGGGCCTCTATATTGGCATCTCTATCAAAGCT-CCGCAG 1071
| |||||| |||||||||||| |||||||||||||||||||||||| | |||||
Sbjct 991 -CT----CCTCAGCTGTTGATGGGGCTTCTATATTGGCATCTCTATCAAAG-TACCGCAA 1044
Query 1072 CTTCCATCTTCTACCACCAATTGCTAAAGCTGG-CAAGAGGCAGCAAAATCCTGCGGTTC 1130
||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 1045 CTTACATCTTCTACCACCAATTGCTAAAGC-GGCCAAGAGGCAGCAAAATCCTGCGGTTC 1103
Query 1131 CTGTGGTACCTTCCAGTTTCAATG---ATTGCATCTCGGATACAGACATGAACGATGCTG 1187
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct 1104 CTGTGGTACCTTCCAGTTTCAATGATTATTACATCTCGGATACAGACATGAACGATGCTG 1163
Query 1188 ATAGTAATAATGACCATGCTGCTGTTGCTTCTGTGGAAAAAATTGCTGCTGCTTCTACCC 1247
||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct 1164 ATAGTAACAATGACCATGCTGCTGTTGCTTCTGTGGAGAAAACTGCTGCTGCTTCTACCT 1223
Query 1248 CTGGTACTGCCAATGAGAACCTGAATGTCGATGGCAGTGGATTGGACCCTTTTCAAGAAG 1307
|| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct 1224 CTTGTACTGCCAATGAGAACCTGGATGTCGATGGCAGTGGATTGGATCCTTTTCAAGAAG 1283
Query 1308 CTGATGGTGGAAATGTCCCTGCTGCTGGTTATGAAATTAGACCAATCGTGCACCTTCTTG 1367
|||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||
Sbjct 1284 CTGATGGTGGAAATGTTCCTGGTCCTGGTTATGAAATTAGACCAATCGTGCACCTTCTTG 1343
Query 1368 GTGAATCTTCTTCATTTGATATAAGGGGTAGCATCTCCAGATTACTGGATGAACGAAGGG 1427
|||| |||||||||||||||||| |||| |||||||||| | | ||||||||||||||||
Sbjct 1344 GTGAGTCTTCTTCATTTGATATACGGGGCAGCATCTCCAAACTGCTGGATGAACGAAGGG 1403
Query 1428 AAGTGAAAGAATTCCTCAGAGAATTTGACCTTTCATCAACTATATCGACTAGACGCCAAG 1487
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1404 AAGTGAGGGAATTCCTCAGAGAATTTGACCTTTCATCAACTATATCGACTAGACGCCAAG 1463
Query 1488 CTTTTAAGGATAGTCTGCGAGGAGGAGTACTCAATGCTCAAAACATAGATATTTCTTTTG 1547
| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 1464 CGTTTAAGGATAGTCTGCGAGGAGGAGTACTCAATGCGCAAAACATAGAAATTTCTTTTG 1523
Query 1548 AGAACTTCCCATATTATTTAAGTGCTACAACAAAGGGTGTTTTGATGATATCGATGTATG 1607
|||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||
Sbjct 1524 AGAACTTCCCATATTATTTAAGTGCTACGACAAAGGGTGTTTTGATGACATCGATGTTTG 1583
Query 1608 TTCATATGAACGGTGGAAGCAAGTATGCAAATTTTGCAACAGACTTGACTACAGCCTGTC 1667
| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1584 TCCATATGAACGGAGGAAGCAAGTATGCAAATTTTGCAACAGAATTGACTACAGCGTGTC 1643
Query 1668 CCCGTATCTTACTCTCTGGACCATCAGGCTCTGAGATATATCAGGAAATGTTGGCAAAAG 1727
||||| | ||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct 1644 CCCGTGTATTACTCTCTGGGCCATCAGGCTCTGAGATATATCAGGAAATGTTGGTGAAAG 1703
Query 1728 CGCTTGCTAAACAGTTTGGGGCCAAATTGATGATTGTTGATTCTCTTTTGTTGCCTGGGG 1787
||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1704 CGCTTGCTAAAAATTTTGGGGCCAAATTGATGATTGTTGACTCTCTTTTGTTGCCTGGGG 1763
Query 1788 GATCACCAGCCAGGGAAGCTGAATCCTCTAAAGAAGGTTCTAGGCGTGAAAGGCTGTCTA 1847
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1764 GATCACCAGCCAGGGAAGCTGAATCTTCTAAAGAAGGTTCTAGGCGTGAAAGGCTGTCTA 1823
Query 1848 TGCTTGCTAAAAGAGCTGTTCAGGCTGCACAAGTATTGCAGCATAAGAAACCGACTTCAA 1907
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1824 TGCTAGCGAAAAGAGCTGTTCAGGCTGCACAAGTATTGCAGCATAAGAAACCGACTTCAA 1883
Query 1908 GTGTTGATGCTGATATAACAGGTGGCTCAACATTAAGCTCTCAGGCTTTGCCAAAACAAG 1967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1884 GTGTTGATGCTGATATAACAGGTGGCTCAACATTAAGCTCTCAGGCTTTGCCAAAACAAG 1943
Query 1968 AAGTGTCAACAGCAACTTCTAAAAGTTACACATTCAAAGCAGGTGACAGAGTTAAATTTG 2027
||||||||||||||||||||||||| | || | | | || | |||||||
Sbjct 1944 AAGTGTCAACAGCAACTTCTAAAAG-T-GAC---C---G-A-GT-----A---AAATTTG 1985
Query 2028 TAGGTCCTTCGGCTTCTGCAATTTCTTCTCTTCAAGGCCAGCTTAGGGGACCGGCCATTG 2087
||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||| ||
Sbjct 1986 TAGGTCCATCGGCTTCTGCAATTTCTTCTCTTCAAGGCCCGCTTAGGGGACCAGCCCCTG 2045
Query 2088 GTTCCCAGGGAAAAGTAGC-CCTTGCATTTGAAGACAACTGTGCTTCAAAAATTGGGATT 2146
||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 2046 GTTTCCAGGGAAAAGTA-CTCCTTGCATTTGAAGACAACTGTGCTTCAAAAATTGGGATT 2104
Query 2147 AGATTCGATAGGCCTGTACAAGATGGCAATGATCTTGGTGGCCTCTGCGAAGAAGACCAT 2206
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2105 AGATTCGATAGGTCTGTACAAGATGGCAATGATCTTGGTGGCCTCTGCGAAGGAGACCAT 2164
Query 2207 GGttttttttGTGCTGCTAGCTCACTTCGGTTAGAAGGTTCTTCTAGCGATGATGCTGAT 2266
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2165 GGTTTTTTCTGTGCTGCTAGCTCACTTCGGTTAGAAGGTTCTTCTAGCGATGATGCTGAT 2224
Query 2267 AAACTCGCCGTTAATGAAATCTTTGAGGTCGCACT-TAGTGAGAGTGAAGGAGGGTCATT 2325
||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |
Sbjct 2225 AAACTCGCCGTTAATGAAATCTTTGAGGTCGCA-TATAGTGAGAGTGAAGGAGGGTCACT 2283
Query 2326 AATATTGTTTCTGAAAGATATTGAGAAATCTCTTGTGGGGAACAGTGATGTGTATGCAAC 2385
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2284 AATATTGTTCCTGAAAGATATTGAGAAATCTCTTGTGGGGAACAGTGATGTGTATGCAAC 2343
Query 2386 CTTGAAAAGCAAGCTTGAGACTTTACCGGAAAATATAGTTGTCATTGCCTCGCAGACCCA 2445
|||||| |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 2344 CTTGAAGAGCAAGCTCGAGACTTTACCGGAAAATATAGTTGTCATGGCCTCACAGACCCA 2403
Query 2446 GTTGGACAGCCGAAAGGAGAAATCCCATCCTGGAGGTTTCTTGTTTACTAAGTTTGGTGG 2505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2404 GTTGGACAGCCGAAAGGAGAAATCCCATCCTGGAGGTTTCTTGTTTACTAAGTTTGGTGG 2463
Query 2506 CAATCAGACGGCACTACTGGATCTAGCATTTCCGGATAATTTTGGTAAACTGCACGATAG 2565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2464 CAATCAGACGGCACTACTGGATCTAGCATTTCCGGATAATTTTGGTAAACTGCACGATAG 2523
Query 2566 AAGCAAAGAAACACCTAAATCAATGAAACAAATAACTCGACTATTTCCTAACAAAATCGC 2625
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 2524 AAGCAAAGAAACACCTAAATCAATGAAACAAATAACTCGACTATTTCCTAACAAAGTCCC 2583
Query 2626 CATCCAGTTACCTCAGGAAGAAGCTTTACTCTCGGATTGGAAGGAGAAACTTGACCGTGA 2685
|||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||
Sbjct 2584 CATCCAGTTACCTCAGGATGAAGCTTTACTCTCTGATTGGAAGGAGAAACTCGACCGTGA 2643
Query 2686 CACAGAGATTTTGAAGGTTCAGGCTAATATAACCAGCATCCTTGCAGTCCTCGCCAAAAA 2745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2644 CACAGAGATTTTGAAGGTTCAGGCTAATATAACCAGCATCCTTGCAGTCCTCGCCAAAAA 2703
Query 2746 CAAACTTGACTGCCCTGACCTTGGAACGTTGTGCATCAAAGATCAAACCCTTCCATCTGA 2805
| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2704 CCGACTTGACTGCCCTGACCTTGGAACCTTGTGCATCAAAGATCAAACCCTTCCATCTGA 2763
Query 2806 AAGTGTTGAAAAAGTGGTTGGCTGGGCTTTCGGTCACCATCTTATGATATGCACTGAACC 2865
|||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 2764 AAGTGTTGAAAAAGTGGTTGGCTGGGCTTTTGGTCACCATCTTATGATATGCAAAGAACC 2823
Query 2866 TATAGTTAAAGACAACAAGCTTGTTATCTCTGCAGAGAGCATTTCATATGGCCTGCAGAC 2925
|||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct 2824 TATAGTTAAAGACAACAAGCTTGTTATCTCTGCAGAAAGCATTACATATGGCCTGCAGAT 2883
Query 2926 GTTGCATGATATTCAGAACGAAAACAAGAGTTTAAAGAAGTCTCTCAAGGATGTTGTTAC 2985
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2884 GTTACATGATATTCAGAACGAAAACAAGAGTTTAAAGAAGTCTCTCAAGGATGTTGTTAC 2943
Query 2986 TGAGAACGAATTTGAGAAAAAACTGTTGTCGGATGTCATTCCACCTAGCGATATAGGTGT 3045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2944 TGAGAACGAATTTGAGAAAAAACTGTTGTCGGATGTCATTCCACCTAGCGATATAGGTGT 3003
Query 3046 TTCCTTTGATGATATTGGAGCTCTGGAAAATGTGAAAGAAACGTTGAAGGAGTTGGTGAT 3105
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 3004 TTCCTTTGATGATATTGGGGCTCTGGAAAATGTGAAAGAAACATTGAAGGAGTTGGTGAT 3063
Query 3106 GCTTCCTCTTCAGAGACCGGAATTGTTTGACAAAGGCCAGCTCACAAAGCCTACGAAAGG 3165
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3064 GCTTCCTCTTCAGAGACCGGAATTGTTTGGCAAAGGCCAGCTCACAAAGCCTACGAAAGG 3123
Query 3166 TATACTGTTGTTTGGACCTCCTGGTACTGGAAAGACGATGCTGGCAAAAGCAGTAGCAAC 3225
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 3124 TATACTGTTGTTTGGACCTCCTGGTACTGGGAAGACGATGCTGGCAAAGGCAGTAGCAAC 3183
Query 3226 TGAGGCTGGCGCAAATTTCATCAATATCTCAATGTCCAGCATTACTTCGAAGTGGTTTGG 3285
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 3184 TGAGGCTGGCGCAAATTTCATCAATATCTCAATGTCTAGCATCACTTCGAAGTGGTTTGG 3243
Query 3286 TGAGGGAGAGAAGTACGTTAAAGCTGTCTTCTCCTTAGCGAGCAAGATTGCGCCAAGTGT 3345
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 3244 TGAGGGAGAGAAGTACGTTAAAGCTGTCTTCTCCTTAGCGAGCAAGATTGCGCCCAGTGT 3303
Query 3346 CATTTTTGTTGATGAGGTTGATAGCATGTTGGGTAGACGTGAAAATCCAGGGGAACATGA 3405
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3304 CATTTTTGTTGATGAGGTTGATAGCATGTTGGGTAGACGTGAAAATCCTGGGGAACATGA 3363
Query 3406 AGCTATGCGTAAGATGAAGAACGAGTTCATGGTAAACTGGGATGGTTTAAGAACAAAGGA 3465
|||||||||||||||||||||||| |||||| |||||||||| |||||| ||||||||||
Sbjct 3364 AGCTATGCGTAAGATGAAGAACGAATTCATGATAAACTGGGACGGTTTACGAACAAAGGA 3423
Query 3466 TAGAGAACGGGTTCTGGTACTCGCTGCCACCAACAGACCATTTGACCTAGACGAAGCTGT 3525
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 3424 TAGAGAACGGGTTCTGGTACTCGCTGCCACCAACAGACCATTTGATCTAGACGAAGCTGT 3483
Query 3526 TATTAGACGGCTTCCCCGGAGATTGATGGTTAATCTTCCAGATGCAACGAACAGATCAAA 3585
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3484 TATTAGACGGCTTCCTCGGAGATTGATGGTTAATCTTCCAGATGCAACGAACAGATCAAA 3543
Query 3586 GATCTTGAGCGTTATTCTAGCAAAAGAAGAAATAGCACCAGACGTCGATTTAGAAGCTAT 3645
||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 3544 GATTTTGAGCGTCATTCTAGCAAAAGAAGAAATAGCACCAGACGTTGATTTAGAAGCTAT 3603
Query 3646 AGCAAATATGACAGATGGGTACTCAGGAAGTGACTTAAAGAATCTGTGTGTGACCGCAGC 3705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3604 AGCAAATATGACAGATGGGTACTCAGGAAGTGACTTAAAGAATCTGTGTGTGACCGCAGC 3663
Query 3706 ACATTTTCCAATCCGAGAAATACTGGAGAAAGAAAAGAAGGAGAAAACTGCAGCTCAGGC 3765
|||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3664 ACATCTTCCAATCCGAGAAATACTGGAGAAAGAAAAGAAGGAGAAAACTGTAGCTCAGGC 3723
Query 3766 TGAGAACCGTCCCACACCGCCATTGTATAGCTGCACAGATGTTCGTTCCCTGACAATGAA 3825
|||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||
Sbjct 3724 TGAGAACCGTCCCACACCGCCACTGTATAGCTGCACAGATGTCCGTCCCCTGACAATGAA 3783
Query 3826 CGATTTCAAGGCTGCCCATGATCAGGTATGCGCAAGTGTGTCTTCAGACTCGTCGAACAT 3885
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 3784 CGATTTCAAGGCTGCCCATGATCAGGTATGCGCAAGTGTTTCTTCAGACTCATCGAACAT 3843
Query 3886 GAACGAACTTCAGCAATGGAACGAGCTGTATGGTGAAGGAGGATCGAGGAAGAAGACGTC 3945
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3844 GAATGAGCTTCAGCAATGGAACGAGCTGTATGGTGAAGGAGGATCGAGGAAGAAGACGTC 3903
Query 3946 GTTGAGCTACTTCATGTAGAAGAGAGACAAAAGAGAGAGGGAGGGAGATTTGTTCGTTTT 4005
||||||||||||||||||||||||| | ||||||||||| ||| ||||||||||||||||
Sbjct 3904 GTTGAGCTACTTCATGTAGAAGAGACAAAAAAGAGAGAGAGAGAGAGATTTGTTCGTTTT 3963
Query 4006 TGATCTCTCTCGTGTTCGGtttttttttttGAATCTCATTTTGGTCGTTTAATTTATAAA 4065
||||||||||||||||||| | ||||| || | |||||||||||||||||||||||||||
Sbjct 3964 TGATCTCTCTCGTGTTCGGATATTTTTCTT-A-TCTCATTTTGGTCGTTTAATTTATAAA 4021
Query 4066 TTTGTGTACAGAGAGAAAGGGTGTTGTTCGTTTTGCT-GTCTAATTCATTTTCTTTCTCA 4124
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 4022 TTTGTGTACAGAGAGAAAGGGTGTTGTTCGTTTTGCTTGTCTAATTCATTTTCTTTCTCA 4081
Query 4125 ACATAAGATGaaaaaaa--CATTCGCTGTATAATCTAA 4160
||||||||||||||||| |||||||||||||||||||
Sbjct 4082 ACATAAGATGAAAAAAAAACATTCGCTGTATAATCTAA 4119
> Ahg470259 jgi|Araly1|470259|fgenesh2_kg.1__213__AT1G02890.1
Length=3969
Score = 3048 bits (1650), Expect = 0.0
Identities = 3074/3743 (82%), Gaps = 171/3743 (5%)
Strand=Plus/Plus
Query 309 CGGCGGAACCGGCTGGTTCTTCATCAGCGAGCGAAGTTCCGATCGAGAATCAAGGACCTG 368
|||| |||||||| | ||||| || ||||| || || ||||| |||||||||||||| |
Sbjct 139 CGGCCGAACCGGCAGCATCTTCGTCGGCGAGTGAGGTGCCGATTGAGAATCAAGGACCGG 198
Query 369 CTTCGGATCCTGGATCGGAATCTGGAGAGCCGGAACTTGGATCTTCTGATCCACAG-GCT 427
||||||||||||||||||||||||||||| ||||| || |||||||||| ||| | |
Sbjct 199 TTTCGGATCCTGGATCGGAATCTGGAGAGCAAGAACTAAGAACTTCTGATCCGCAGAG-T 257
Query 428 -ATGGATGCGGAGAA-GCCTGTT-GTTACAACTGATGT-CCCTGTGATGGAGAACTCTCC 483
|| |||||||| || ||| ||| | || || | ||| ||| | ||||||| | ||
Sbjct 258 AAT-GATGCGGA-AAGGCCAGTTACTAAC-ACCGTTGTGCCC-GCGATGGAG-A----CC 308
Query 484 TGAAACCGACGCTAACCCTGAAGTCGAAGTCTTGGCCACACCTAC-CGTAGCAGGTGAAG 542
| | | | | || || ||||| |||| ||| | || ||||| | | |||||| |||
Sbjct 309 -G--A-C-A--CAAATCCAGAAGTTGAAGGCTTCGTGACGCCTACACCT-GCAGGTCAAG 360
Query 543 CGGTGGCGGATGCTGACAAATCTAAGGCGGCTAAGAAGCGAGCTT--TAAAGGCTCCATG 600
||||| ||| ||||| ||||| || | | |||||||| | || | |||||||| ||
Sbjct 361 TGGTGGTGGAAGCTGAGAAATCAAAATCCTCCAAGAAGCG-GATTGCT-AAGGCTCCTTG 418
Query 601 GGCGAAGCTACTTTCCCAGTATTCTCAGAATCCTCACCGTGTCATCAGAGGCCCTGTGTT 660
||| ||||| ||||| |||||| ||||||| ||||| ||||||| |||||| |||||||
Sbjct 419 GGCCAAGCTGCTTTCTCAGTATCCTCAGAACCCTCATTGTGTCATGAGAGGCTCTGTGTT 478
Query 661 TACTGTTGGACGCCGGGGATGTGATTTATCTATCAGAGACCAAGCTATGCCCAGCACCCT 720
|||||||||||| || ||||| ||||||| ||||||||| || | ||||||| ||
Sbjct 479 TACTGTTGGACGGCGAGGATGCGATTTATGTATCAGAGATCATTCCATGCCCAATGTTCT 538
Query 721 CTGTGAACTGAA-GCAGTCTGAGCACGGTGGTCCATCAGTTGCATCCCTTGAGATATTAG 779
|||||||| || ||||||||||||||| |||||||| |||||||| || |||||| |||
Sbjct 539 ATGTGAACT-AAGGCAGTCTGAGCACGGAGGTCCATCGGTTGCATCACTGGAGATAATAG 597
Query 780 GAAATGGAGTTA-TTGTTCATGTCAATGGCAAG-TGTTACCAGAA-AAGTACTTGTGTTC 836
| ||||||| || ||||||| |||||||||||| | |||||| || |||||||||||||
Sbjct 598 GGAATGGAG-TACTTGTTCAGGTCAATGGCAAGAT-TTACCA-AAGGAGTACTTGTGTTC 654
Query 837 ATCTACGGGGTGGTGACGAGGTGATCTTCAGC-CTTAATGGGAAACATGCTTATATATTT 895
||||||| ||||| || || | ||||||||| | ||||||||||||||||||||||
Sbjct 655 ATCTACGAGGTGGCGATGAAATTATCTTCAGCAC-CCCTGGGAAACATGCTTATATATTT 713
Query 896 CAACCTGTTAAAGATGAAAATTTAGC-AGCTCCTGACAGAGCTTCTTCGTTGAGTATATG 954
|| ||| |||||||||||||| |||| | |||| || ||||||||||| ||||| || |
Sbjct 714 CAGCCTCTTAAAGATGAAAATCTAGCTA-CTCCAGATAGAGCTTCTTCATTGAGCATTTT 772
Query 955 TGAAGCTCGGGGTGCCCCTCTGAAAGGGGTTCATGTCGAGACAAGGGCAGGAGATGTTGA 1014
|||||| | | ||||||||||||||||| ||||||| |||||||| ||| | || ||
Sbjct 773 TGAAGCGCAGAGTGCCCCTCTGAAAGGGCTTCATGTTGAGACAAGAGCA-G-GA----GA 826
Query 1015 TGGGGCCTCAGATGTTGATGGGGCCTCTATATTGGCATCTCTATCAAAGCTCCGCAGCT- 1073
||| || || || | ||||||| ||| |||||||| | | | |
Sbjct 827 ------CTC-----TTCAT-----CT-T-TATTGGCGTCTATATCAAAGTTACATA-ATG 867
Query 1074 TCCATCTTCTACCACCAATTGCT-AAAGCTGGCAAGAGGCAGCAAAATCCTGCGGTTCCT 1132
||| | |||||||||| | |||| |||| || ||| | ||||||||| | | |||||||
Sbjct 868 TCCCTTTTCTACCACCTACTGCTAAAAG-TGTCAAAATTCAGCAAAATTCAGAGGTTCCT 926
Query 1133 GTGGTACCTTCCAGTTTCAATGATTGCA-TCTCGGATACAGACATGAACGATGCTGATAG 1191
|| ||||||| || | ||||||||| | ||| |||| ||||||||||||| ||||||
Sbjct 927 GTTCTACCTTCTAGCTGCAATGATTGTATTCT-GGATGTTGACATGAACGATGATGATAG 985
Query 1192 TAATAATGACCATGCTGCTGTTGCTTCTGTGGAAAAAATTGCTGCTGCTTCTACCCCTGG 1251
| ||||||| ||||||||| ||||||| ||| |||| ||| |||||| ||| || |
Sbjct 986 TCATAATGATCATGCTGCTATTGCTTCAACGGAGAAAA---CTGTTGCTTCGACCTCTTG 1042
Query 1252 TACTGCCAATGA-GAACCTGAATGTC-GATGGCAGTGGATTGGACCCTTTTCAAGAAGCT 1309
| ||||||| || | ||||||||| | ||||| | |||| |||| |||||||||||||||
Sbjct 1043 TGCTGCCAACGATG-ACCTGAATG-CAGATGGAAATGGAATGGATCCTTTTCAAGAAGCT 1100
Query 1310 GATGGTGGAAATGTCCCTGCTGCTGGTTATGAAATTAGACCAATCGTGCACCTT-CTTGG 1368
|| ||||||||| | |||| | |||||||||||||||||||||| || | || |||||
Sbjct 1101 GAGGGTGGAAATATTCCTGGTTCTGGTTATGAAATTAGACCAATTTTG-AGTTTACTTGG 1159
Query 1369 TGAAT-CTTCTTCATTTGATATAAGGGGTAGCATCTCCAGATTAC---TGGATGAACGAA 1424
| || ||||| ||||||| ||||||||||||| |||| | ||| ||||||||||||
Sbjct 1160 -GGATCCTTCTGAATTTGATTTAAGGGGTAGCATTTCCAAAATACTGGTGGATGAACGAA 1218
Query 1425 GGGAAGTGAAAGAATTCCTCAGAGAATTTGACCTTTCATCAAC-T--ATATCGACTAGAC 1481
||||||||| ||| | || | ||||| ||| | | ||||| | | | | |||||||
Sbjct 1219 GGGAAGTGAGGGAAATGCTGAAAGAATATGAACGTCCATCAGCTTCGGTGTTAACTAGAC 1278
Query 1482 GCCAAGCTTTTAAGGATAGTCTGCGAGGAGGAGTACTCAATGCTCAAAACATAGATA-TT 1540
| ||||| ||||||||| |||||||||||| |||||||| |||| ||||||| | ||
Sbjct 1279 GTCAAGCACATAAGGATAGACTGCGAGGAGGAATACTCAATCCTCAGGACATAGA-AGTT 1337
Query 1541 TCTTTTGAGAACTTCCCATATTAT-TTAAGT-GCTACAACAAAGGGTGTTTTGATGATAT 1598
|||||||||||||| ||||||| | |||||| || ||||| |||| ||||||||||||||
Sbjct 1338 TCTTTTGAGAACTTTCCATATT-TCTTAAGTGGC-ACAACTAAGGATGTTTTGATGATAT 1395
Query 1599 CGATGTATGTTCATATGAACG-GTGGAAGCAAGTATGCAAATTTTGCAACAGACTTGACT 1657
| | |||| |||||||| | |||||| ||||||| || | |||| |||| ||| |
Sbjct 1396 CAACATATGCCCATATGAA-GTATGGAAGGGAGTATGCGAAGTATGCATCAGATTTGCCA 1454
Query 1658 ACAGCCTGTCCCCGTATCTTACTCTCTGGACCATCAGGCTCTGAGATATATCAGGAAATG 1717
||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 1455 ACAGCGTGTCCCCGTATCTTACTCTCTGGACCATCTGGTTCTGAGATATATCAGGAAATG 1514
Query 1718 TTGGCAAAAGCGCTTGCTAAACAGTTTGGGGCCAAATTGATGATTGTTGATTCTCTTTTG 1777
|| |||||||||||||| ||| | |||||||||||||||||||||||||| ||||| |||
Sbjct 1515 TTAGCAAAAGCGCTTGCGAAAAAATTTGGGGCCAAATTGATGATTGTTGACTCTCTCTTG 1574
Query 1778 TTGCCTGGGGGATCACCAGCCAGGGAAGCTGAATCCT-CTAAAGAAGGTTCTAGGCGTGA 1836
|| |||||||||||| || ||| |||||| | || || | |||||| |||||||||||||
Sbjct 1575 TTACCTGGGGGATCAACACCCAAGGAAGCAG-ATTCTACCAAAGAAAGTTCTAGGCGTGA 1633
Query 1837 AAGGCTGTCTATGCTTGCTAAAAGAGCTGTTCAGGCTGCACAA------GTATTGCAGCA 1890
||| |||||| ||||||||||| ||||||| |||||||||||| || ||||||||
Sbjct 1634 AAGACTGTCTGTGCTTGCTAAACGAGCTGTACAGGCTGCACAAGCTGCTGTTTTGCAGCA 1693
Query 1891 TAAGAAACCGACTTCAAGTGTTGATGCTGATATAACAGGTGGCTCAACATTAAGCTCTCA 1950
||||||||| | |||||||||||| | ||||||||||||||| |||||||||||||||||
Sbjct 1694 TAAGAAACCAATTTCAAGTGTTGAGGATGATATAACAGGTGGATCAACATTAAGCTCTCA 1753
Query 1951 GGCT-TTGCCAAAACAAGAAGTGTCAACAGCAACTTCTAAAAGTTACACATTCAAAGCAG 2009
|||| || || | |||||||| ||||| ||||| ||||||||||| || || |||||||
Sbjct 1754 GGCTGTT-CCGAGGCAAGAAGTATCAACTGCAACCTCTAAAAGTTATACCTTTAAAGCAG 1812
Query 2010 GTGACAGAGTTAA-ATTTGTAGGTCCTT---CGGC-T-TC-TGC-AAT-TT-CTTCTCTT 2059
|||| |||| ||| ||| |||| |||| | | | || ||| | || |||||||
Sbjct 1813 GTGATAGAG-TAAGGTTTCTAGGCCCTTCAACTTCTTCTCTTGCTTCTCTTGCTTCTCTC 1871
Query 2060 CAAG-GCCAGCTTAGGGGACCGGCCATTGGTTCCCAGGGAAAAGTAGC-CCTTGCATTTG 2117
|||| ||| | |||||||||||| | |||| |||||||||||| | |||||||||||
Sbjct 1872 CAAGCTCCA-CCTAGGGGACCGGCAACAGGTTTTCAGGGAAAAGTA-CTCCTTGCATTTG 1929
Query 2118 AAGACAACT-G-TGCTTCAAAAATTGGGATTAGATTCGATAGGCCTG-TACAAGATGGCA 2174
||| ||| | | | |||||||||||||| ||||||| |||||| | | ||| ||||||||
Sbjct 1930 AAGGCAA-TGGAT-CTTCAAAAATTGGGGTTAGATTTGATAGGTC-GATACCAGATGGCA 1986
Query 2175 ATGATCTTGGTGGCCTCTGCGAAGAAGACCATGGttttttttGTGCTGCTAGCTCACTTC 2234
||||||||||||| || |||||||||||||| ||| | || || ||||
Sbjct 1987 ATGATCTTGGTGGTCTATGCGAAGAAGACCA------------TGC-G--AGTTCTCTTC 2031
Query 2235 GGTTAGAAGGTTCTTCTAGCGATGATGCTGATAAACTCGCCGTTAATGAAATCTTTGAGG 2294
|||||||| ||||||| || || || ||||||||||| ||| ||||||||||||||||||
Sbjct 2032 GGTTAGAAAGTTCTTCCAGTGACGACGCTGATAAACTTGCCATTAATGAAATCTTTGAGG 2091
Query 2295 TCGCACTTAGTGAGAGTGAAGGAGGGTCATTAATATTGTTTCTGAAAGATATTGAGAAAT 2354
| || ||| ||| |||||| |||||||||| |||||||| || ||||| ||||||||||
Sbjct 2092 TGGCTTTTAATGAAAGTGAAAGAGGGTCATTGATATTGTTCCTCAAAGACATTGAGAAAT 2151
Query 2355 CTCTTGT-GGGGAACAGTGATGTGTATGCAACCTTGAAAAGCAAGCTTGAGACTTTACCG 2413
|| ||| |||||||| |||||||||| ||| ||||| ||||||||||||| ||||||
Sbjct 2152 CT-GTGTCGGGGAACACTGATGTGTATATAACTTTGAAGAGCAAGCTTGAGAATTTACCC 2210
Query 2414 GAAAATATAGTTGTCATTGCCTCGCAGACCCAGTTGGACAGCCGAAAGGAGAAATCCCAT 2473
|| ||||| |||||||| || || || ||||||||||||||||||||||| ||||||||
Sbjct 2211 GAGAATATTGTTGTCATAGCTTCACAAACCCAGTTGGACAGCCGAAAGGAAAAATCCCAC 2270
Query 2474 CCTGGAGGTTTCTTGTTTACTAAGTTTGGTGGCAATCAGACGGCACTACTGGATCTAGCA 2533
||||||||||||||||| || |||||||| |||| ||||| |||||||||||||| |||
Sbjct 2271 CCTGGAGGTTTCTTGTTCACAAAGTTTGGCAGCAACCAGACAGCACTACTGGATCTTGCA 2330
Query 2534 TTTCCGGATAA-TTT--TGGTAAACTGCACGATA-GAAGCAAAGAAACACCTAAATCAAT 2589
||||||||||| ||| ||||| |||||| |||| ||| |||||||| ||||||||| |
Sbjct 2331 TTTCCGGATAATTTTGGTGGTAGACTGCAGGATAGGAA-CAAAGAAATGCCTAAATCAGT 2389
Query 2590 GAAACAAATAACTCGACTATTTCCTAACAAAATCG-CCATCCAGTTACCTCAGGAAGAAG 2648
||||||||| ||| | |||||||| |||||| | | |||||||||||||| |||| ||||
Sbjct 2390 GAAACAAATCACTAGGCTATTTCCAAACAAAGT-GACCATCCAGTTACCTGAGGATGAAG 2448
Query 2649 CTTTACT-CTCGGATTGGAAGGAGAAACTTGACCGTGACACAGAGATTTTGAAGGTTCAG 2707
|||| || | ||| |||||||| |||||||| ||||| |||||||| |||||| |||
Sbjct 2449 CTTTGCTGGT-GGACTGGAAGGATAAACTTGAACGTGATACAGAGATCCTGAAGGCTCAA 2507
Query 2708 GCTAATATAACCAGCATCCTTGCAGTCC-TCGCCAAAAACAAACTTGACTGCCCTGACCT 2766
|||||||| |||||||||| ||| |||| | | ||||||| | || | ||||||||||||
Sbjct 2508 GCTAATATTACCAGCATCCGTGCGGTCCTTAG-CAAAAACCATCTAGTCTGCCCTGACCT 2566
Query 2767 TGGAACGTTGTGCATCAAAGATCAAACCCTTCCATCTGAAAGTGTTGAAAAAGTGGTTGG 2826
|| ||| |||||||||||||| ||||||||||| ||||| ||||| || |||||||||||
Sbjct 2567 TGAAACCTTGTGCATCAAAGACCAAACCCTTCCTTCTGATAGTGTGGAGAAAGTGGTTGG 2626
Query 2827 CTGGGCTTTCGGTCACCATCTTATGATA-TGCACTGAACCTATAGTTAAAGACAACAAGC 2885
|| |||||| |||||||||||||| | ||| | ||||||| ||| || ||||||||||
Sbjct 2627 CTTTGCTTTCAATCACCATCTTATGA-ACTGCGCAGAACCTACAGTCAAGGACAACAAGC 2685
Query 2886 TTGTTATCTCTGCAGAGAGCATTTCATATGGCCTGCAGAC-GTTGCATGATATTCAGAAC 2944
|| | ||||| ||||| ||||| ||||||||||| || | |||||||| ||||| |||
Sbjct 2686 TTATCATCTCGGCAGAAAGCATCACATATGGCCTGGAG-CTGTTGCATGGGATTCAAAAC 2744
Query 2945 GAAAACAAGAGTTTAAAGAAGTCTCTCAAGGATGTTGTTACTGAGAACGAATTTGAGAAA 3004
||||||||||| |||||| ||||| || ||||||||||||||||| ||||| ||||||
Sbjct 2745 GAAAACAAGAGCACAAAGAAATCTCTGAAAGATGTTGTTACTGAGAATGAATTCGAGAAA 2804
Query 3005 AAACTGTTGTCGGATGTCATTCCACCTAGCGATATAGGTGTTTCCTTTGA-TGATATTGG 3063
||||| | || || |||||||| || || ||||| ||||||| |||| | |||||||||
Sbjct 2805 AAACTCCTATCAGACGTCATTCCTCCAAGTGATATCGGTGTTT-CTTTCAGTGATATTGG 2863
Query 3064 AGCTCTGGAAAATGTGAAAGAAACGTTGAAGGAGTTGGTGATGCTTCCTCTTCAGAGACC 3123
||| |||||||||||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct 2864 GGCTTTGGAAAATGTGAAAGATACCTTGAAGGAGTTGGTGATGCTTCCTCTTCAAAGACC 2923
Query 3124 GGAATTGTTTGACAAAGGCCAGCTCACAAAGCCTACGAAAGGTATACTGTTGTTTGGACC 3183
|||||||||| |||||| || || ||||||||||| || ||||||||||||||||||||
Sbjct 2924 CGAATTGTTTGGCAAAGGTCAACTTACAAAGCCTACTAAGGGTATACTGTTGTTTGGACC 2983
Query 3184 TCCTGGTACTGGAAAGACGATGCTGGCAAAAGCAGTAGCAACTGAGGCTGGCGCAAA-TT 3242
|||||||| || ||||| ||| |||||||||| ||||||||||||||||| ||||| ||
Sbjct 2984 GCCTGGTACGGGGAAGACAATGTTGGCAAAAGCTGTAGCAACTGAGGCTGGGGCAAACTT 3043
Query 3243 TCATCAATATCTCAATGTCCAGCATTACTTCGAAGTGGTTTGGTGAGGGAGAGAAGTACG 3302
| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 3044 T-ATCAATATTTCAATGTCCAGCATTACTTCAAAGTGGTTTGGTGAGGGAGAGAAGTACG 3102
Query 3303 TTAAAGCTGTCTTCTCCTTAGCGAGCAAGATTGCGCCAAGTGTCATTTTTGTTGATGAGG 3362
|||||||||| ||||| ||||| || ||||| || ||||| |||||||||||||||||||
Sbjct 3103 TTAAAGCTGTTTTCTCTTTAGCAAGTAAGATAGCTCCAAGCGTCATTTTTGTTGATGAGG 3162
Query 3363 TTGATAGCATGTTGGGTAGACGTGAAAATCCAGGGGAACATGAAGCTATGCGTAAGATGA 3422
||||||||||| |||| |||||||| |||||||| |||||||||||||||||||||||||
Sbjct 3163 TTGATAGCATGCTGGGAAGACGTGAGAATCCAGGAGAACATGAAGCTATGCGTAAGATGA 3222
Query 3423 AGAACGAGTTCATGGTAAACTGGGATGGTTTAAGAACAAAGGATAGAGAACGGGTTCTGG 3482
||||||| |||||| |||||||||| || ||| | |||||||||| |||| | ||| | |
Sbjct 3223 AGAACGAATTCATGATAAACTGGGACGGCTTACGCACAAAGGATAAAGAAAGAGTTTTAG 3282
Query 3483 TACTCGCTGCCACCAACAGACCATTTGACCTAGACGAAGCTGTTATTAGACGGCTTCCCC 3542
|| | ||||| |||||||||||||||||||| |||||||| || ||||||||||||||||
Sbjct 3283 TATTGGCTGCTACCAACAGACCATTTGACCTTGACGAAGCAGTAATTAGACGGCTTCCCC 3342
Query 3543 GGAGATTGATGGTTAATCTTCCAGATGCAACGAACAGATCAAAGATCTTGAGCGTTATTC 3602
| || |||||||||||||| || ||| || | |||||||| |||||||||||||| |||
Sbjct 3343 GAAGGTTGATGGTTAATCTACCGGATTCAGCAAACAGATCGAAGATCTTGAGCGTAATTT 3402
Query 3603 TAGCAAAAGAAGAAATAGCACCAGACGTCGATTTAGAAGCTATAGCAAATATGACAGATG 3662
| || |||||||| || ||| |||||| ||||||||||| |||||||||||||||||||
Sbjct 3403 TGGCGAAAGAAGAGATGGCAGAAGACGTAGATTTAGAAGCAATAGCAAATATGACAGATG 3462
Query 3663 GGTACTCAGGAAGTGACTTAAAGAATCTGTGTGTGACCGCAGCACATTTTCCAATCCGAG 3722
|||||||||| ||||| ||||||||||| || |||||||| |||||| |||| |||||||
Sbjct 3463 GGTACTCAGGGAGTGATTTAAAGAATCTTTGCGTGACCGCGGCACATCTTCCTATCCGAG 3522
Query 3723 AAATACTGGAGAAAGAAAAGAAGGAGAAAACTGCAGCTCAGGCTGAGAACCGTCCCACAC 3782
| || ||||| |||||||||||||||| || || ||||| | || ||||| || || |
Sbjct 3523 AGATTCTGGAAAAAGAAAAGAAGGAGAGAAGTGTGGCTCAATCCGAAAACCGACCAACGC 3582
Query 3783 CGCCA-TTGTATAGCTGCACAGATGTTCGTTCCCT-GA-CAATGAACGATTTCAAGGCTG 3839
| | | || |||||| | | ||| || | |||| || || |||| ||||||||||| |
Sbjct 3583 CAC-AGTTATATAGCAGTAGAGACATTAGA-CCCTTGAACA-TGAATGATTTCAAGGCCG 3639
Query 3840 CCCATGATCAGGTATGCGCAAGTGTGTCTTCAGACTCGTCGAACATGAACGAACTTCAGC 3899
| |||||||||||||| || |||||||| || || || ||||||||||| || || ||||
Sbjct 3640 CACATGATCAGGTATGTGCGAGTGTGTCGTCTGATTCATCGAACATGAATGAGCTCCAGC 3699
Query 3900 AATGGAACGAGCTGTATGGTGAAGGAGGATCGAGGAAGAAGACGTCGTTGAGCTACTTCA 3959
||||||||||||| || || |||||||| |||||||||||||| || ||||||||||||
Sbjct 3700 AATGGAACGAGCTCTACGGAGAAGGAGGCTCGAGGAAGAAGACATCACTGAGCTACTTCA 3759
Query 3960 TGTAGAAGAGAGACAAAAGAGAG 3982
|||| |||||| | || ||||||
Sbjct 3760 TGTA-AAGAGA-A-AACAGAGAG 3779
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 162125260980
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5