BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G02650.1
Length=2032
Score E
Sequences producing significant alignments: (Bits) Value
Ahg943462 jgi|Araly1|943462|scaffold_604006.1 2704 0.0
Ahg470282 jgi|Araly1|470282|fgenesh2_kg.1__236__AT1G03050.1 817 0.0
> Ahg943462 jgi|Araly1|943462|scaffold_604006.1
Length=1852
Score = 2704 bits (1464), Expect = 0.0
Identities = 1753/1886 (93%), Gaps = 46/1886 (2%)
Strand=Plus/Plus
Query 68 ACGGCGTACGTAAGTCAAAATGGGTTCAAGTAAGCTAAAACGTGCCATAGGAGCCGTGAA 127
|||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2 ACGGTGTACGTTAGTCAAAATGGGTTCAAGTAAGCTAAAACGTGCAATAGGAGCCGTGAA 61
Query 128 AGATCAAACAAGCGTAGGATTAGCCAAAGTCGGTGGTCGAAGCAGTTCTTTAACGGAACT 187
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 62 AGATCAAACAAGCGTAGGATTAGCCAAAGTCGGAGGTCGAAGCAGTTCTTTAACGGAACT 121
Query 188 CGAAATAGCTGTCGTGAAAGCGACGCGACATGATGACTATCCAGCGGAGGACAAGTACAT 247
||| |||||||||||||||| || |||| ||||| |||||||||||||| || |||||
Sbjct 122 TGAAGTAGCTGTCGTGAAAGCAACAAGACACGATGAATATCCAGCGGAGGAGAAATACAT 181
Query 248 TAGAGAGATTTTATGCCTAACTTCTTACTCACGCAATTACGTAAGCGCTTGTGTGGCAAC 307
|||||||| ||| |||||||||| ||||||||||| |||||||||||||||||| |||
Sbjct 182 CAGAGAGATCTTAAGCCTAACTTCATACTCACGCAACTACGTAAGCGCTTGTGTGACAAT 241
Query 308 TCTCTCGCGACGGCTCAACAAGACCAAGAACTGGTCGGTTGCTCTCAAAACCTTGATTTT 367
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 242 TCTCTCGAGACGGCTCAACAAGACCAAGAACTGGTCGGTTGCTCTCAAAACCTTGATTTT 301
Query 368 GATCCAACGGTTGCTAACAGATGGAGATAGAGCCTACGAGCAAGAGATCTTCTTCGCGAC 427
|||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||
Sbjct 302 GATCCAACGGTTGCTAACAGATGGCGATCGAGCCTACGAGCAAGAGATATTCTTCGCGAC 361
Query 428 GAGACGAGGAACGAGATTGCTTAACATGTCTGATTTCAGAGATGCGAGTCAGTCTGATTC 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 362 GAGACGAGGAACGAGATTGCTTAACATGTCTGATTTCAGAGATGCGAGTCAGTCTGATTC 421
Query 488 GTGGGATTACTCTGCTTTTGTTCGGACTTATGCTTTGTATTTGGATGAACGTCTTGATTA 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 422 GTGGGATTACTCTGCTTTTGTTCGGACTTATGCTTTGTATTTGGATGAACGTCTTGATTA 481
Query 548 CCGGATGCAAGGAA-GACGAGGGaaaaaaaaaagtggtggtggtggtggcggtgatggtg 606
|||||||||||||| || ||||| ||| | ||||| ||||||||||
Sbjct 482 CCGGATGCAAGGAAGGA-GAGGG-------AAA-----CGCAGTGGT---GGTGATGGTG 525
Query 607 ATTCCGGCGAGGAAGATGATCATCGAGGGACAAGCAACGATATTCGGTCGAAAGCTATTG 666
||||||||||||| ||||||||||||| ||| || | | | |||||||| ||||||||||
Sbjct 526 ATTCCGGCGAGGATGATGATCATCGAGAGACCAGTACCAACATTCGGTCAAAAGCTATTG 585
Query 667 TGGTTAAATCTAAACCAGTCGCAGAGATGAAAACAGAGAAAATCTTCAACAGAGTACAAC 726
|||||||||||||| | ||| |||||||||||||||||||||| ||| |||||||||||
Sbjct 586 TGGTTAAATCTAAAACGGTCACAGAGATGAAAACAGAGAAAATTTTCGTCAGAGTACAAC 645
Query 727 ATTTACAACAGCTTCTTGATCGGTTCTTGGCTTGTCGTCCAACAGGTAATGCGAAGAACA 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 646 ATTTACAACAGCTTCTTGATCGGTTCTTGGCTTGTCGTCCAACAGGTAATGCGAAGAACA 705
Query 787 ACAGAGTGGTGATTGTGGCTATGTATCCGATAGTAAAAGAGAGTTTTCAGTTATACTACA 846
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 706 ACAGAGTGGTGATTGTGGCTTTGTATCCGATAGTAAAAGAGAGTTTTCAGTTATACTACA 765
Query 847 ATATAACAGAGATCATGGGAGTATTAATAGAGCGATTCATGGAATTAGACATTCATGATT 906
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 766 ACATAACAGAGATCATGGGAGTATTAATAGATCGATTCATGGAATTAGACATTCATGATT 825
Query 907 CCATCAAAGTCTATGAAATCTTCTGTCGAGTTTCTAAACAGTTTGACGAGTTAGATCCGT 966
| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 826 CGATCAAAGTCTATGAAATCTTCTGTAGAGTTTCTAAACAGTTTGACGAGTTAGATCCGT 885
Query 967 TTTACGGATGGTGTAAGAACATGGCAGTTGCAAGATCTTCAGAGTATCCAGAATTGGAAA 1026
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 886 TTTACGGATGGTGTAAGAACATGGGAGTTGCAAGATCTTCAGAGTATCCAGAATTGGAAA 945
Query 1027 AGATTACACAGAAGAAACTTGATCTCATGGATGAGTTTATAAGAGATAAATCAGCTTTAG 1086
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 946 AGATCACACAGAAGAAACTTGATCTCATGGATGAGTTTATAAGAGATAAATCAGCTTTAG 1005
Query 1087 CTGCACAAACAACAAAATCATCATCAAA-AAGGTCTAACAAATCTGAGGAGGAGGAGAGC 1145
|||||||| ||||||||||||||||||| || |||||||||||||||||||||||||| |
Sbjct 1006 CTGCACAATCAACAAAATCATCATCAAACAA-GTCTAACAAATCTGAGGAGGAGGAGAAC 1064
Query 1146 AAAACAGAGTATATTCAAGAAAATCAAGAAGATTTAAACTCCATCAAAGCATTACCCGCA 1205
||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 1065 AAAACAGAGGAAATTCAAGAAAATCAAGAAGATTTAAACTCCATTAAAGCATTACCAGCA 1124
Query 1206 CCGgaacagaaagaagaagaggaagaagaagagaaaatggaaacaaagaaagatgt-tga 1264
|| ||| | | |||| | | ||||||| | | ||||||||||||||||||||| | |||
Sbjct 1125 CC-GAA-A-CACGAAG-A-A-GAAGAAG-A-A-AAAATGGAAACAAAGAAAGAT-TCTGA 1174
Query 1265 agaagtggtttcaagacaagatcaagaGGGTGATTTGCTGGATTTAACAGATGAAGCGGG 1324
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct 1175 GGAAGTGGTTTCAAGACAAGGTCAAGAGGGTGATTTGCTGGATTTAACAGATGAAGCCGG 1234
Query 1325 TGTAACGGCAGGAACGGTTGGTGATAGTTTGGCGTTAGCGTTATTTGATGGTGTC-GT-T 1382
|| |||||||||||||||||||||||||||||||||||| ||||||||||| | | || |
Sbjct 1235 TGAAACGGCAGGAACGGTTGGTGATAGTTTGGCGTTAGCATTATTTGATGGAG-CGGTAT 1293
Query 1383 GGGACCGAGAGTGCGTCTGGACCGGGGTGGGAAGCGTTTAACGATAATTCGGCGGATTGG 1442
|| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1294 -CCACTGAGAGTGCATCTGGACCGGGGTGGGAAGCATTTAACGATAATTCGGCGGATTGG 1352
Query 1443 GAGACGGACTTGGTGAGATCGGCGACAAGATTGTCGGGACAAAAGAGTGAGCTCGGAGGA 1502
|||||||||||||||| |||||| || ||||||||||||||||||| |||||| ||||||
Sbjct 1353 GAGACGGACTTGGTGAAATCGGCAACGAGATTGTCGGGACAAAAGAATGAGCTTGGAGGA 1412
Query 1503 GGATTTGATACTTTGTTGCTTGATGGAATGTATCAGTACGGTGCGGTTAATGCTGCGGTT 1562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1413 GGATTTGATACTTTGTTGCTTGATGGAATGTATCAGTACGGTGCGGTTAATGCTGCGGTT 1472
Query 1563 AAAACGTCTACGGCTTATGGAAGTAGTGGAAGTGCTAGTAGTGTGGCTTTTGGTTCTGCA 1622
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1473 AAAACGTCTACGGCTTATGGAAGTAGTGGAAGTGCAAGTAGTGTGGCTTTTGGTTCTGCA 1532
Query 1623 GGAAGCCCAGCAGCCTCGATGTTGGCATTGCCAGCGCC-GCCACCG-A--CAGCCAAT-G 1677
||||| ||||||||||| |||||||||||||||||||| |||| || | ||| ||| |
Sbjct 1533 GGAAGACCAGCAGCCTCAATGTTGGCATTGCCAGCGCCAGCCAACGGAAACAG--AATCG 1590
Query 1678 GAAACAGAAATAGTCCGGTGATGGTGGATCCATTCGCGGCGTCGCTAGAGGTAGCCCCAC 1737
||| || ||| ||||||| |||||||| ||||| |||||||||||||||||||||||||
Sbjct 1591 GAAGCA-AAA--GTCCGGTAATGGTGGACCCATTTGCGGCGTCGCTAGAGGTAGCCCCAC 1647
Query 1738 CAGCATACGTGCAAATGAATGATATGGAGAAAAAACAAAGATTGTTAATGGAAGAACAAA 1797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1648 CAGCATACGTGCAAATGAATGATATGGAGAAAAAACAAAGATTGTTAATGGAAGAACAAA 1707
Query 1798 TAATGTGGGATCAATACAACAGAAGTGGAAGACAAGGTCACATGAATTTCGGACAAAACC 1857
||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1708 TAATGTGGGATCAGTACAACAGAAATGGAAGACAAGGTCACATGAATTTCGGACAAAACC 1767
Query 1858 AACAACAACAA-TATTATCAGCTTCCATACTCCATGGGACCTTACTCTTACACGCCTCGC 1916
||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1768 AACAACAACAACT-TTATCAGCTTCCATACTCCATGGGACCTTATTCTTACACGCCTCGC 1826
Query 1917 TATTGATATTATATAAATAAACAATC 1942
|||||| |||||| ||| | ||||||
Sbjct 1827 TATTGAAATTATAAAAACATACAATC 1852
> Ahg470282 jgi|Araly1|470282|fgenesh2_kg.1__236__AT1G03050.1
Length=1974
Score = 817 bits (442), Expect = 0.0
Identities = 1408/1853 (76%), Gaps = 152/1853 (8%)
Strand=Plus/Plus
Query 87 ATGGGTTCAAGTAAGCTAAAACGTGCCATAGGAGCCGTGAAA-GATCAAACAAGCGTAGG 145
|||||||| |||||| | ||||| |||||||||||||| ||| || ||||||||||| ||
Sbjct 1 ATGGGTTCGAGTAAGTTTAAACGAGCCATAGGAGCCGT-AAAGGACCAAACAAGCGTCGG 59
Query 146 AT-TAGCCAAAGTCGGTGGTCGAAGCAG-TTCTTTAACGGAACTCGAAATAGCTGTCGTG 203
| ||||||||||| ||||||||| | |||||| | ||||| || |||| ||||
Sbjct 60 -TCTAGCCAAAGTCAACGGTCGAAGC-GCTTCTTTGTCAGAACTTGACGTAGCCATCGTC 117
Query 204 AAAGCGACGCGACATGATGACTATCCAGCGGAGGACAAGTACATTAGAGAGATT-TTATG 262
|||||||| || || || || | |||||| || || || ||||| ||||||||| ||| |
Sbjct 118 AAAGCGACTCGTCACGAAGAGTTTCCAGCAGAAGAGAAATACATAAGAGAGATTCTTA-G 176
Query 263 CCTAACTTCTTACTCACGCAATTACGT-AAGCGCTTGTG-TGGCAACTCTCTCGCGACGG 320
|||||||||||||||||||| |||| | || |||||| | | | || || ||| ||||
Sbjct 177 CCTAACTTCTTACTCACGCAGTTACATCAA-CGCTTGCGTTAAC-ACGCTTTCGAGACGT 234
Query 321 CTCAACAAGACCAAGA-ACTGGTCGGTTGCTCTCAAAACCTTGATTTTGATCCAACGGTT 379
|| ||||| ||||| | |||| | ||||||||||||||||||||||||||||| ||| |
Sbjct 235 CTTAACAAAACCAA-ATGCTGGACCGTTGCTCTCAAAACCTTGATTTTGATCCAGCGGCT 293
Query 380 GC-TAACAGATGGAGAT-AGAGCCTACGAGCAAGAGATCTTCTTCGCGACGAGACGAGGA 437
| || ||| |||||| | |||||| |||||||||||||||||||| || | || |||
Sbjct 294 -CTTAGGAGAAGGAGATCA-AGCCTATGAGCAAGAGATCTTCTTCGCCACTCGCCGCGGA 351
Query 438 ACGA-GATTGCTTAACATGTCTGATTTCAGAGATGCGAGTC-A-GTCTG-ATTCGTGGGA 493
|| | | || || || ||||||||||| || ||| | || | ||| | |||| |||||
Sbjct 352 ACCAGGCTT-CTCAATATGTCTGATTTTAGGGAT--GTTTCGAGGTC-GAATTCTTGGGA 407
Query 494 TTACTCTGCTTTTGTTC-GGACTTATGCTTTGTA-TTTGGATGAACGTCTTGATTACCGG 551
|||||||| |||| || ||||||| || ||||| || || ||| | ||||||| | ||
Sbjct 408 CTACTCTGCGTTTG-TCAGGACTTACGCGTTGTACCTT-GACGAAAGGCTTGATTTCAGG 465
Query 552 ATGCAAGGAAGACGA-GGGaaaaaaaaaagtggtggtggtggtggcggtgatggtgATTC 610
||||||| ||||| | ||| ||| ||| | | | | ||| || || | |||
Sbjct 466 ATGCAAGCAAGAC-ATGGG-AAACGTGGAGT-TTACT-GCGTTGGAGGAGAAGCTGA-AG 520
Query 611 CGGCGAGGAAGATGATCATCGAGGGACAAGCAAC-GATATTCGGTCGAAAGCTATTGTGG 669
| || ||| | ||||| | | | || | ||| || || | ||||| ||||
Sbjct 521 AAG-GA-GAACAAGATCA---A--G-C-CGCTGCTGAT-CTC--TCCACGGCTATCGTGG 568
Query 670 TTAAATCTA-AACCAGTCGCAGAGATGAAAACAGAGAAAATCTTCAACAGAGTACAACAT 728
| | || | ||||| |||| ||||||||||||||| | || |||| |||| | ||||||
Sbjct 569 TCAGGTC-ACAACCAATCGCCGAGATGAAAACAGAGCAGATTTTCATCAGAATCCAACAT 627
Query 729 TTACAACAGCTTCTTGATCGGTTCTTGGCTTGTCGTCCAACAGGTAATGCGAAGAACAAC 788
|| || || |||||||| || ||||||||||||||||||||||||||||||| |||||||
Sbjct 628 TTGCAGCAACTTCTTGACCGTTTCTTGGCTTGTCGTCCAACAGGTAATGCGAGGAACAAC 687
Query 789 AGAGTGGTGATTGTGGCTATGTATCCGATAGTAAAAGAGAGTTTTCAGTTATACTACAAT 848
|||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||| ||
Sbjct 688 AGAGTGGTGATTGTGGCTCTGTATCCGATAGTAAAAGAGAGTTTTCAGATATATTACGAT 747
Query 849 ATAACAGAGATCATGGG-AGTATTAATAGAGCGATTCATGGAATTAGACATTCATGATTC 907
|||||||||| ||||| | | || || || ||||||||||| ||||| |||| ||||||
Sbjct 748 GTAACAGAGATAATGGGGATT-TTGATTGATCGATTCATGGAGTTAGATATTCCTGATTC 806
Query 908 CATCAAAGTCTATGAAATCTTCTGTCGAGTTTCTAAACAGTTTGACGAGTTAGATCCGTT 967
||||| ||||| || || |||||||| || || ||||| || || ||| | |||| |||
Sbjct 807 GATCAAGGTCTACGACATTTTCTGTCGGGTCTCGAAACAATTCGAAGAGCTCGATCAGTT 866
Query 968 TTACGGATGGTGTAAGAACATGGC-AGTTGCAAGATCTTCAGAGTATCCAGA-ATTGGAA 1025
||| |||||||||||||||| | ||||| | ||||| ||||||||||| || | |
Sbjct 867 CTACTCTTGGTGTAAGAACATGGGGA-TTGCACGGTCTTCTGAGTATCCAGAGATAG-AG 924
Query 1026 AAGATTACACAGAAGAAACTTGATCTCATGGATGAGTTTATAAGAGATAAATCAGCTTTA 1085
||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||
Sbjct 925 AAGATCACACAGAAGAAGCTTGATCTCATGGATGAGTTTATAAGAGACAAATCTGCTCTA 984
Query 1086 G--CTGCACAAA-CAA-CAAAATCATCATCAAAAAGGTCT-AA-CAAATCTGAGGAGGAG 1139
| | | || || ||| ||||||| | | || ||| || | || || || ||
Sbjct 985 GAACAG-ACCAAGCAATCAAAATC-TGTT-AAC----TCTGAAGCCGAT--GAAGAAGAA 1035
Query 1140 GA-GA-GCAA-AACAGAGTATATTCAA-GAAAATCAAGAAGATTTAAACTCCA-TCAAAG 1194
|| || |||| ||||| | | | | || ||| | |||||||| | || | || |||| |
Sbjct 1036 GATGATGCAAGAACAGCGGA-AGTAAATGAAGAGCAAGAAGACATGAA-TGCAATCAAGG 1093
Query 1195 CATTACCCGCACCGgaac-agaaagaagaagaggaagaagaa---gagaaaatggaaaca 1250
| ||||| | ||| || | ||||||||||| || ||| || ||| || | || ||
Sbjct 1094 CCTTACCTGAACCTCCACCA-AAAGAAGAAGAAGACGAAAAACCTGAGGAA--G-AAGCA 1149
Query 1251 aagaaagatgttgaaga-agtggtttcaagacaagatcaaga-GGGTGATTTGCTGGAT- 1307
||| |||| || || | || | || |||||| || | ||||||||| ||||||
Sbjct 1150 AAGGAAGAAGT-GATCATAGAGAAG--AA-ACAAGAAGAA-ATGGGTGATTTACTGGATC 1204
Query 1308 TTAACAGATG-AAGCGG-G-TGTAA-CGGCAGGAACGGTTGGTGATAGTTTGGCGTTAGC 1363
|| | || || ||| | || || | ||| || | | || ||||| || || || ||
Sbjct 1205 TTGGGA-ATACAAACGGCGGTG-AAGCAGCAC-AA-GCT-GGAGATAGCTTAGCATTGGC 1259
Query 1364 GTTATTTGATGGTGTCGTTGG-GACCGAGAG-TG---C-G--TCTGGACCGGGGTGGGAA 1415
|||||||| || | | | | || || | || | | ||||| || || ||||||
Sbjct 1260 TTTATTTGACGG-GCCATACGCGAGCG-GTTCTGGTTCAGAGTCTGGTCCAGGATGGGAA 1317
Query 1416 GCGTTTAACGATAATTCGGCGGATTGGGAGACGGACTT-GGTG-AGATCGGCGACAAGA- 1472
|||||||| ||| ||||||| |||||||| || | ||| |||| | | | || |||| |
Sbjct 1318 GCGTTTAAGGATGATTCGGCCGATTGGGAAACAG-CTTTGGTGCAAA-CAGCTACAA-AC 1374
Query 1473 TTGTCGGGACAAAAGAGTGAGCTCGGAGGAGGATTTGATACT-TTGTTGCTTGATGGAAT 1531
||||||||||||||| || ||||||||||| ||||||| | ||||||||| | |||||
Sbjct 1375 TTGTCGGGACAAAAGTCAGAACTCGGAGGAGGCTTTGATA-TGTTGTTGCTTAACGGAAT 1433
Query 1532 GTATCAGTACGGTGCGGTTAATGCTGCGGTTAAAACGTCTACGGCTTATGGAAGT-AGTG 1590
||||||| ||||||| || || ||||| || ||||| || ||||||||||| | || |
Sbjct 1434 GTATCAGCACGGTGCTGTAAACGCTGCTGTGAAAACATCGACGGCTTATGGT-GCCAGCG 1492
Query 1591 GAAGTGCTAGTAGTGTGGCTTTTGGTTCTGCAGGAAGCCCAGCAGCCTCGATGTTGGCA- 1649
|||| || || ||| |||| ||||||||||||||||| |||||||| | |||||||||
Sbjct 1493 GAAGCGCGAGCAGTATGGCATTTGGTTCTGCAGGAAGACCAGCAGCAACTATGTTGGCAC 1552
Query 1650 TTGCCAGCGCC-GCCACCGACAGCCAATGGAAACAG---AAA---TA---GTCCGGTGAT 1699
|| ||||| || || | | || ||||||||||| ||| || | |||||
Sbjct 1553 TT-CCAGCACCAGCAAT-G---GCTAATGGAAACAGCGGAAACAATAACAGCCCGGTTCC 1607
Query 1700 GGTGGATCCATTCGCGGCGTCGCTAGAGGTAGCCCCACCAGCATACGTGCAAATGAATGA 1759
|||||||||| || ||||| | ||||| || || ||| |||| ||||| ||||||||
Sbjct 1608 CATGGATCCATTTGCAGCGTCATTGGAGGTTGCGCCGCCACCATATGTGCAGATGAATGA 1667
Query 1760 TATGGAGAAA-AAACAAAG-ATTGTTAATGGAAGAACAAATAATGTGGGATCAATACA-- 1815
|||||| ||| ||||| || || ||| ||||||||||| ||||||||||||||||||
Sbjct 1668 TATGGA-AAAGAAACAGAGGAT-GTTGATGGAAGAACAGATAATGTGGGATCAATACTCT 1725
Query 1816 ACAGAAGTGGAAGACAAGGTCACATGAATTTC-GGACAAAACCAACAAC-AAC 1866
| ||||| | ||||||||| ||||||||| | || ||||||||| ||| |||
Sbjct 1726 AGAGAAG-G-AAGACAAGGACACATGAATCTAAGG-CAAAACCAA-AACCAAC 1774
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76409031470
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5