BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G02930.1
Length=1757
Score E
Sequences producing significant alignments: (Bits) Value
Ahg490266 jgi|Araly1|490266|fgenesh2_kg.6__3400__AT4G02930.1 2320 0.0
Ahg909999 jgi|Araly1|909999|Al_scaffold_0001_253 1509 0.0
Ahg895427 jgi|Araly1|895427|Al_scaffold_0006_3423 363 3e-99
Ahg891424 jgi|Araly1|891424|Al_scaffold_0007_3410 248 1e-64
> Ahg490266 jgi|Araly1|490266|fgenesh2_kg.6__3400__AT4G02930.1
Length=1455
Score = 2320 bits (1256), Expect = 0.0
Identities = 1390/1456 (95%), Gaps = 4/1456 (0%)
Strand=Plus/Plus
Query 29 CCTTTCTCTCGTACAAGTCAAAATGGCGTCCGTTGTTCTTCGAAACCCTAGCTCGAAGCG 88
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2 CCTTTCTCTTGTACAAGTCAAAATGGCGTCCGTAGTTCTTCGAAACCCTAGCTCGAAGCG 61
Query 89 CCTTGTTCCATTCTCTTCCCAGATCTACTCTCGCTGTGGTGCTTCCGTTACTTCCTCTTA 148
|||||||||||||||||||||||||||||||| || |||||||| |||||||||||||
Sbjct 62 TCTTGTTCCATTCTCTTCCCAGATCTACTCTCGTTGCGGTGCTTCTATTACTTCCTCTTA 121
Query 149 CTCGATCTCTCATTCTATCGGTGGAGATGATCTCTCTTCCTCTACCTTCGGAACCTCCTC 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 122 CTCGATCTCTCATTCTATCGGTGGAGATGATCTCTCTTCCTCTACCTTCGGAACCTCTTC 181
Query 209 CTTCTGGAGATCCATGGCCACTTTTACTCGAAATAAACCTCATGTAAATGTTGGAACTAT 268
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 182 CTTGTGGAGATCCATGGCCACTTTTACTCGAAATAAACCTCATGTAAATGTTGGAACTAT 241
Query 269 TGGGCATGTTGATCATGGCAAGACCACTTTAACTGCTGCAATCACAAAGGTTCTTGCTGA 328
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 242 TGGGCATGTTGATCATGGAAAGACCACTTTAACTGCTGCAATCACAAAGGTTCTTGCTGA 301
Query 329 GGAGGGCAAAGCTAAAGCTATTGCCTTTGATGAAATTGATAAAGCTCCTGAAGAGAAGAA 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 302 GGAGGGCAAAGCTAAAGCTATTGCCTTTGATGAAATTGATAAAGCTCCTGAAGAGAAGAA 361
Query 389 GAGAGGAATTACTATTGCCACGGCTCATGTGGAGTATGAAACTGCAAAGCGTCACTATGC 448
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 362 GAGAGGAATTACTATTGCCACGGCTCATGTGGAGTATGAAACTGCCAAGCGTCACTATGC 421
Query 449 TCATGTGGATTGCCCTGGACACGCAGATTATGTTAAAAATATGATTACTGGAGCTGCGCA 508
|||||||||||||||||| ||||| ||||||||||||||||||||||||||||| || ||
Sbjct 422 TCATGTGGATTGCCCTGGGCACGCTGATTATGTTAAAAATATGATTACTGGAGCGGCACA 481
Query 509 AATGGATGGCGGAATTCTTGTGGTTTCAGGACCAGATGGACCCATGCCGCAGACAAAGGA 568
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 482 AATGGATGGTGGAATTCTTGTGGTTTCAGGACCAGATGGACCCATGCCGCAGACGAAGGA 541
Query 569 ACATATTCTACTTGCACGCCAGGTTGGTGTTCCCTCACTTGTGTGCTTCTTGAACAAAGT 628
|||||| ||||| || ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 542 ACATATACTACTGGCTCGCCAGGTTGGTGTTCCATCACTTGTGTGCTTCTTGAACAAAGT 601
Query 629 TGATGTGGTGGATGACCCTGAGCTCTTGGAGCTTGTCGAGATGGAACTACGTGAGCTCCT 688
||||||||||||||| |||||||| |||||||||||||||||||||||||| || |||||
Sbjct 602 TGATGTGGTGGATGATCCTGAGCTGTTGGAGCTTGTCGAGATGGAACTACGAGAACTCCT 661
Query 689 CAGCTTCTACAAGTTTCCTGGGGATGATATTCCCATCATCCGAGGATCTGCTCTGTCCGC 748
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 662 CAGCTTCTACAAGTTTCCTGGGGATGATATTCCCATCATTCGAGGATCTGCTCTGTCCGC 721
Query 749 ATTACAGGGCACCAATGATGAAATTGGAAGGCAAGCTATATTAAAGCTGATGGATGCTGT 808
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 722 ATTACAGGGCACCAATGATGAAATTGGAAGGCAAGCTATATTAAAGCTAATGGATGCTGT 781
Query 809 TGATGAATATATACCTGACCCTGTTCGCGTCCTTGACAAGCCTTTCTTGATGCCAATTGA 868
||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct 782 TGATGAATACATACCTGACCCTGTTCGCGTGCTTGACAAGGCTTTCTTGATGCCAATTGA 841
Query 869 AGATGTTTTCTCAATTCAAGGACGTGGAACTGTTGCAACCGGTCGTATCGAACAGGGAGT 928
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 842 AGATGTTTTCTCAATTCAAGGACGTGGAACTGTTGCAACCGGTCGTATTGAACAGGGAAC 901
Query 929 CATTAAAGTGGGTGAAGAAGTTGAGATATTGGGTTTACGTGAGGGGGGTG-TTCCACTGA 987
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 902 CATTAAAGTGGGTGAAGAAGTTGAGATATTGGGTTTACGTGAGGGGGG-GCTTCCACTGA 960
Query 988 AATCGACTGTAACTGGGGTTGAGATGTTCAAGAAGATTTTGGATAATGGACAGGCTGGTG 1047
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 AGTCGACTGTAACTGGGGTTGAGATGTTCAAGAAGATTTTGGATAATGGACAGGCTGGTG 1020
Query 1048 ATAATGTAGGACTTCTTCTGCGTGGGCTAAAGAGAGAAGACATTCAGCGTGGAATGGTGA 1107
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1021 ACAATGTAGGACTTCTTCTGCGGGGGCTAAAGAGAGAAGACATTCAGCGTGGAATGGTGA 1080
Query 1108 TTGCTAAGCCTGGTTCATGCAAGACATACAAGAAGTTTGAAGCAGAGATTTACGTGCTCA 1167
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1081 TTGCTAAGCCTGGTTCGTGCAAGACGTACAAGAAGTTTGAAGCAGAGATTTACGTGCTCA 1140
Query 1168 CAAAGGATGAAGGTGGACGTCACACTGCATTTTTCTCTAACTACAGGCCTCAGTTTTACT 1227
||||||| ||||| |||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 1141 CAAAGGACGAAGGAGGACGTCACACTGCTTTTTTCTCCAACTACAGGCCTCAGTTTTACT 1200
Query 1228 TGAGGACTGCAGATATCACTGGCAAAGTGGAATTACCCGAAAACGTGAAGATGGTTATGC 1287
|||||||||||||||||||||| ||||| ||| |||| || || ||||||||||| ||||
Sbjct 1201 TGAGGACTGCAGATATCACTGGAAAAGTAGAACTACCTGAGAATGTGAAGATGGTCATGC 1260
Query 1288 CTGGTGACAATGTCACAGCTGTTTTCGAGTTAATCATGCCTGTCCCACTCGAAACAGGTC 1347
| ||||||||||| || || ||||| ||| |||||||||||||||||||||||||||| |
Sbjct 1261 CCGGTGACAATGTAACTGCAGTTTTTGAGCTAATCATGCCTGTCCCACTCGAAACAGGGC 1320
Query 1348 AAAGATTTGCCTTAAGGGAAGGAGGTAGAACAGTTGGAGCTGGTGTTGTATCAAAAGTGA 1407
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1321 AAAGATTTGCCTTGAGGGAAGGAGGTAGAACAGTTGGAGCTGGTGTTGTGTCAAAAGTGA 1380
Query 1408 TGACCTAAACTACTCAAAAGCACATTCTTCTCCTTCGTTCTCTAGGAATCCATCAATT-T 1466
||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 1381 TGAGCTAAAGTACTCAAAAGCACATTCTTCTCCTTTGTTCTCTAGGAATCCATCAATTAT 1440
Query 1467 CGAGAtttttcttttt 1482
||||||||| |||||
Sbjct 1441 -GAGATTTTTTTTTTT 1455
> Ahg909999 jgi|Araly1|909999|Al_scaffold_0001_253
Length=1350
Score = 1509 bits (817), Expect = 0.0
Identities = 1197/1377 (87%), Gaps = 39/1377 (3%)
Strand=Plus/Plus
Query 51 ATGGCGTCCGTTGTTCTTCGAAACCCTAGCTCGAAGCGCCTTGTTCCATTCTCTTCCCAG 110
||||| ||||||| |||||||||| ||| |||||| |||||||||||||| ||||| |||
Sbjct 1 ATGGCTTCCGTTGCTCTTCGAAACTCTACCTCGAAACGCCTTGTTCCATTTTCTTCTCAG 60
Query 111 ATCTACTCT-CGCTGTGGTGCTTCCGTTACTTCCTCTTACTCGATCTCTCA-TTCTATCG 168
||||| ||| || || || | |||| | ||| | ||||||||| || ||| |||
Sbjct 61 ATCTA-TCTACGATGCGGAGGTTCC---A--TCC-C---CTCGATCTCACATTTC-GTCG 109
Query 169 GTGGAGATGATC-TCTCTTCCTCTACCTTCGGAACCTCCTCCTTCTGGAGATCCATGGCC 227
| || ||||||| | | |||| | | || | | |||||| |||||||| |||||
Sbjct 110 GAGGTGATGATCGT-TGTTCC-CCAAATTATG--CGACCTCCTGGTGGAGATCGATGGCT 165
Query 228 ACTTTTACTCGAA-ATAAACCTCATGTAAATGTTGGAACTATTGGGCATGTTGATCATGG 286
||||| || |||| | ||||||||||||||||||||||| ||||| || |||||||||||
Sbjct 166 ACTTTCACCCGAACA-AAACCTCATGTAAATGTTGGAACAATTGGACACGTTGATCATGG 224
Query 287 CAAGACCACTTTAACTGCTGCAATCACAAAGGTTCTT-GCTGAGGAGGGCAAAGCTAAAG 345
||||||||||| |||||||| ||||| |||| | || ||||| || || |||||||| |
Sbjct 225 GAAGACCACTTTGACTGCTGCGATCACGAAGG-TGTTGGCTGAAGAAGGTAAAGCTAAGG 283
Query 346 CTATTGCCTTTGATGAAATTGATAAAGCTCCTGAAGAGAAGAAGAGAGGAATTACTATTG 405
|| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 284 CTGTTGCGTTTGATGAAATTGATAAAGCTCCTGAAGAGAAGAAGAGAGGAATTACTATTG 343
Query 406 CCACGGCTCATGTGGAGTATGAAACTG-CAAAGCGTCACTATGCTCATGTGGATTGCCCT 464
| ||||||||||||||||| ||||| | |||||||||| |||||||||||||||||||||
Sbjct 344 CAACGGCTCATGTGGAGTACGAAAC-GACAAAGCGTCATTATGCTCATGTGGATTGCCCT 402
Query 465 GGACACGCAGATTATGTTAAAAATATGATTACTGGAGCTGCGCAAATGGATGGCGGAATT 524
|||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 403 GGACACGCTGATTATGTTAAAAATATGATTACTGGAGCTGCACAAATGGATGGTGGAATT 462
Query 525 CTTGTGGTTTCAGGACCAGATGGACCCATGCCGCAGACAAAGGAACATATTCTACTTGCA 584
||||||||||| | |||||||||||| ||||| || || ||||| |||||||| |||||
Sbjct 463 CTTGTGGTTTCCGCACCAGATGGACCAATGCCTCAAACTAAGGAGCATATTCTGCTTGCG 522
Query 585 CGCCAGGTTGGTGTTCCCTCACTTGTGTGCTTCTTGAACAAAGTTGATG-TGGTGGATGA 643
|| ||||| || ||||| || ||||| |||||| |||| |||||||||| || || ||||
Sbjct 523 CGTCAGGTCGGCGTTCCATCGCTTGTATGCTTCCTGAATAAAGTTGATGCTGTTG-ATGA 581
Query 644 CCCTGAGCTCTTGGAGCTTGTCGAGATGGAACTACGTGAGCTCCTCAGCTTCTACAAGTT 703
||| ||| | ||||||||||| ||||||||||| ||||| || |||||||||||||||||
Sbjct 582 CCCAGAGTTGTTGGAGCTTGTAGAGATGGAACTGCGTGAACTTCTCAGCTTCTACAAGTT 641
Query 704 TCCTGGGGATGATATTCCCATCATCCGAGGATCTGCTCTGTCCGCATTACAGGGCACCAA 763
|||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||
Sbjct 642 TCCTGGGGATGATATTCCCATCATTCGAGGATCTGCTCTGTCTGCATTGCAGGGTACAAA 701
Query 764 TGATGAAATTGGAAGGCAAGCTATATTAAAGCTGATGGATGCTGTTGATGAATATATACC 823
|| ||||||||| || |||| ||||| ||||| ||||| ||||| ||||||||||||||
Sbjct 702 CGAAGAAATTGGACGGAAAGCCATATTGAAGCTAATGGAAGCTGTAGATGAATATATACC 761
Query 824 TGACCCTGTTCGCGTCCTTGACAAGCCTTTCTTGATGCCAATTGAAGATGTTTTCTCAAT 883
|||||| |||||||| ||||| || |||||| | ||||||||||||||||||||||| ||
Sbjct 762 TGACCCAGTTCGCGTGCTTGATAAACCTTTCCTCATGCCAATTGAAGATGTTTTCTCGAT 821
Query 884 TCAAGGACGTGGAACTGTTGCAACCGGTCGTATCGAACAGGGAGTCATTAAAGTGGGTGA 943
||| |||||||||||||||||||| || ||||| ||||||||| ||||||||| |||||
Sbjct 822 TCAGGGACGTGGAACTGTTGCAACTGGCCGTATTGAACAGGGAACCATTAAAGTAGGTGA 881
Query 944 AGAAGTTGAGATATT-GGGTTTACGTGAGGGGGGTGTTCCACTGAAATCGACTGTAACTG 1002
||||||||||||||| ||||| | || ||| | | ||||||||||| || |||||||
Sbjct 882 AGAAGTTGAGATATTAGGGTTAA-GTCCGGGAC-T-T-CCACTGAAATCCACGGTAACTG 937
Query 1003 GGGTTGAGATGTTCAAGAAGATTTTGGATAATGGACAGGCTGGTGATAATGTAGGACTTC 1062
| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 938 GTGTTGAGATGTTCAAGAAAATTTTGGATAATGGACAGGCTGGTGATAATGTAGGACTT- 996
Query 1063 TTCT-GCGTGGGCTAAAGAGAGAAGACATTCAGCGTGGAATGGTGATTGCTAAGCCTGGT 1121
|| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 997 TTGTTGCGTGGGCTAAAGAGAGAAGACATCCAGCGTGGAATGGTAATTGCTAAGCCTGGT 1056
Query 1122 TCATGCAAGACATAC-AAGAAGTTTGAAGCAGAGATTTACGTGCTCACAAAGGATGAAGG 1180
|| |||||||| | | |||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 1057 TCTTGCAAGAC-TGCCAAGAAGTTTGAAGCGGAGATTTACGTGCTCACGAAGGATGAAGG 1115
Query 1181 TGGACGTCACACTGCATTTTTCTCTAACTACAGGCCTCAGTTTTA-CTTGAGGACTGCAG 1239
||||||||| || || |||||||| |||||||||||||||||||| || ||| || || |
Sbjct 1116 TGGACGTCATACCGCTTTTTTCTCCAACTACAGGCCTCAGTTTTATCT-GAGAACCGCTG 1174
Query 1240 ATATCACTGGCAAAGTGGAATTACCCGAAAACGTGAAGATGGTTATGCCTGGTGACAATG 1299
|| ||||||| ||||| |||||||| ||||| ||||||||||||||||| ||||||||||
Sbjct 1175 ATGTCACTGGAAAAGTAGAATTACCTGAAAATGTGAAGATGGTTATGCCCGGTGACAATG 1234
Query 1300 TCACAGCTGTTTTCGAGTTAATCATGCCTGTCCCACTCGAAACAGGTCAAAGATTTGC-C 1358
|||| || ||||||||| ||||| | ||||||||||| || || |||||||||||||| |
Sbjct 1235 TCACTGCAGTTTTCGAGCTAATCCTCCCTGTCCCACTTGAGACCGGTCAAAGATTTGCTC 1294
Query 1359 TTAAGGGAAGGAGGTAGAACAGTTGGAGCTGGTGTTGTATCAAAAGTGATGACCTAA 1415
| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct 1295 T-AAGGGAAGGAGGTAGAACAGTTGGAGCTGGTGTGGTATCAAAAGTGATGAGCTAA 1350
> Ahg895427 jgi|Araly1|895427|Al_scaffold_0006_3423
Length=477
Score = 363 bits (196), Expect = 3e-99
Identities = 226/240 (94%), Gaps = 3/240 (1%)
Strand=Plus/Plus
Query 508 AAATGGATGGCGGAATTCTTGTGGTTTCAGGACCAGATGGACCCATGCCGCAGACAAAGG 567
|||||||||| |||||||||||||||| ||| ||||||||||||||||| |||||||| |
Sbjct 8 AAATGGATGGTGGAATTCTTGTGGTTTTAGGTCCAGATGGACCCATGCCACAGACAAAAG 67
Query 568 AACATATTCTACTTGCACGCCAGGTTGGTGTTCCCTCACTTGTGTGCTTCTTGAACAAAG 627
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 68 AACATATCCTACTTGCACGCCAGGTTGGTGTTCCCTCACTTGTGTGCTTCTTGAACAAAG 127
Query 628 TTGATGTGGTGGATGACCCTGAGCTCTTGGAGCTTGTCGAGATGGAACTACGTGAGCTCC 687
|||||||||||||||| |||||||| ||||||||||||||||| |||||||| | ||||
Sbjct 128 TTGATGTGGTGGATGATCCTGAGCTGTTGGAGCTTGTCGAGATTGAACTACG--A-CTCC 184
Query 688 TCAGCTTCTACAAGTTTCCTGGGGATGATATTCCCATCATCCGAGGATCTGCTCTGTCCG 747
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 185 TCAACTTCTACAATTTTCCTGGGGATGATATTCCCATCATCCGAGGATCTGCTCTGTCCG 244
Score = 174 bits (94), Expect = 2e-42
Identities = 94/94 (100%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 1078 AGAGAGAAGACATTCAGCGTGGAATGGTGATTGCTAAGCCTGGTTCATGCAAGACATACA 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 380 AGAGAGAAGACATTCAGCGTGGAATGGTGATTGCTAAGCCTGGTTCATGCAAGACATACA 439
Query 1138 AGAAGTTTGAAGCAGAGATTTACGTGCTCACAAA 1171
||||||||||||||||||||||||||||||||||
Sbjct 440 AGAAGTTTGAAGCAGAGATTTACGTGCTCACAAA 473
Score = 163 bits (88), Expect = 4e-39
Identities = 134/153 (88%), Gaps = 15/153 (10%)
Strand=Plus/Plus
Query 888 GGACGTGGAACTGTTGCAACCGGTCGTATCGAACAGGGAGTCATTAAAGTGGGTGAAGAA 947
||||||||||||||||||| | || ||||||||| |||||||||||||||||||
Sbjct 244 GGACGTGGAACTGTTGCAA-----C--ATTGAACAGGGAACCATTAAAGTGGGTGAAGAA 296
Query 948 GTTGAGATATTGGGTTTACGTGAGGGGGGTGTTCCACTGAAATCGACTGTAACTGGGGTT 1007
||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct 297 GTTGAGATATTGGGTTTAC-------GGG-CTTCCACTGAAATCGACTGTAACTGGGGTT 348
Query 1008 GAGATGTTCAAGAAGATTTTGGATAATGGACAG 1040
|||||||||||||||||||||||||||||||||
Sbjct 349 GAGATGTTCAAGAAGATTTTGGATAATGGACAG 381
> Ahg891424 jgi|Araly1|891424|Al_scaffold_0007_3410
Length=414
Score = 248 bits (134), Expect = 1e-64
Identities = 158/170 (93%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 510 ATGGATGGCGGAATTCTTGTGGTTTCAGGACCAGATGGACCCATGCCGCAGACAAAGGAA 569
|||||||| |||||||||||||||| ||| ||||||||||||||||| |||||||| |||
Sbjct 1 ATGGATGGTGGAATTCTTGTGGTTTTAGGTCCAGATGGACCCATGCCACAGACAAAAGAA 60
Query 570 CATATTCTACTTGCACGCCAGGTTGGTGTTCCCTCACTTGTGTGCTTCTTGAACAAAGTT 629
||||| |||||| |||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 61 CATATCCTACTTACACGCCAGGTTGGTATTTCCTCACTTGTGTGCTTCTTGAACAAAGTT 120
Query 630 GATGTGGTGGATGACCCTGAGCTCTTGGAGCTTGTCGAGATGGAACTACG 679
|||||||||||||| ||| |||| ||||||||||||||||||||||||||
Sbjct 121 GATGTGGTGGATGATCCTAAGCTGTTGGAGCTTGTCGAGATGGAACTACG 170
Score = 228 bits (123), Expect = 1e-58
Identities = 131/135 (97%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 756 GGCACCAATGATGAAATTGGAAGGCAAGCTATATTAAAGCTGATGGATGCTGTTGATGAA 815
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 172 GGCACCAATGATGAAATTGGAAGGCAAGCTATATTAAAGCTAATGGATGCTGTTGATGAA 231
Query 816 TATATACCTGACCCTGTTCGCGTCCTTGACAAGCCTTTCTTGATGCCAATTGAAGATGTT 875
|| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct 232 TACATACCTGACCCTGTTCGCGTGCTTGACAAGGCTTTCTTGATGCCAATTGAAGATGTT 291
Query 876 TTCTCAATTCAAGGA 890
|||||||||||||||
Sbjct 292 TTCTCAATTCAAGGA 306
Score = 82.4 bits (44), Expect = 1e-14
Identities = 44/44 (100%), Gaps = 0/44 (0%)
Strand=Plus/Plus
Query 929 CATTAAAGTGGGTGAAGAAGTTGAGATATTGGGTTTACGTGAGG 972
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 309 CATTAAAGTGGGTGAAGAAGTTGAGATATTGGGTTTACGTGAGG 352
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65934214095
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5