BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G04540.1
Length=1980
Score E
Sequences producing significant alignments: (Bits) Value
Ahg895523 jgi|Araly1|895523|Al_scaffold_0006_3519 3042 0.0
Ahg913379 jgi|Araly1|913379|Al_scaffold_0001_3633 2163 0.0
Ahg943226 jgi|Araly1|943226|scaffold_603770.1 1916 0.0
Ahg895520 jgi|Araly1|895520|Al_scaffold_0006_3516 850 0.0
Ahg490098 jgi|Araly1|490098|fgenesh2_kg.6__3232__AT4G04510.1 737 0.0
> Ahg895523 jgi|Araly1|895523|Al_scaffold_0006_3519
Length=1980
Score = 3042 bits (1647), Expect = 0.0
Identities = 1871/1982 (94%), Gaps = 4/1982 (0%)
Strand=Plus/Plus
Query 1 ATGGGGAAATACTCTGTTTTGATGATCTTTATCGCTTCTTCTCTTCTTATTGTCCTTCAA 60
||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||
Sbjct 1 ATGGGGAAATACTCTGTTTTGATGATCTTAATCGCTTCTTTTCTTCTTCTTGTCCTTCAA 60
Query 61 AACGTGGAAATCGTTAACGCCGTCGGATGTACCGGAAGCTTCTTCAACGGTAATAGCAGC 120
||||| ||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 61 AACGTCGAAATTGTTAACGCCGTCGGATGTACCGGAAGCTTCTTCAACGTTAACAGCAGC 120
Query 121 TACGCTCAGAATCGCCGCGATCTCTTCTCTACTCTTCCTAATAAAGTCGTCACCAACGGT 180
||||||||||||||||| || ||||||||||||||| || ||||||||||||||||||||
Sbjct 121 TACGCTCAGAATCGCCGTGAACTCTTCTCTACTCTTGCTGATAAAGTCGTCACCAACGGT 180
Query 181 GGATTCTACAACT-CTTCACTCGGCAAAAGTCCCAACATAGTTCATGCTGTTGCTCTCTG 239
|| |||||||| | |||||||||||||||||||||||| |||||| |||||||| |||||
Sbjct 181 GGCTTCTACAA-TGCTTCACTCGGCAAAAGTCCCAACAGAGTTCACGCTGTTGCCCTCTG 239
Query 240 CGGAAGAGGATACGAGCAACAAGCTTGTATCAGGTGTGTCGACAGTGCGATACAGGGTAT 299
||||||||||||||||||||||||||||||||| |||||||| |||||||| | ||||||
Sbjct 240 CGGAAGAGGATACGAGCAACAAGCTTGTATCAGTTGTGTCGAAAGTGCGATTCGGGGTAT 299
Query 300 ACTAACGACAACGAGTTGTCTAAACCGCGTGGATTCATTCACGTGGGACAAAGACGAGGA 359
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 ACTAACGACAACAAGTTGTCTAAACCGCGTGGATTCATTCACGTGGGACAAAGACGAGGA 359
Query 360 AGACAATGTTTCTTGTCTTGTAAGTACCTCAAACCACTCAACTTTTGGGAACCTCGAGCT 419
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 360 AGACAACGTTTCTTGTCTTGTAAGTACCTCAAACCACTCTACTTTTGGGAACCTCGAGCT 419
Query 420 TAGACCTTCTGTTAGATACCAAAGTCCGAATAGTATCGAGCCATCGAAAAACATGACTCT 479
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 420 TAGACCTTCTGTTAGATACCAAAGTCCAAATAGTATCGAGCCATCGAAAAACATGACCCT 479
Query 480 TTTCGAACAAGAATGGAATGCAATGGCTAATCGGACCGTCGAGTCTGCCACAGAAGCTGA 539
||| ||||||||||||||||||||||||||||||||| || || |||| | |||||||||
Sbjct 480 TTTTGAACAAGAATGGAATGCAATGGCTAATCGGACCCTCAAGGCTGCAAAAGAAGCTGA 539
Query 540 AACTTCCTCGGTACTTAAGTACTATAGTGCCGAAAAAGCCGAGTTCACAGAGTTTCCAAA 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 AACTTCCTCGGTACTTAAGTACTATAGTGCCGAAAAAGCCGAGTTCACAGAGTTTCCAAA 599
Query 600 TGTTTACATGCTGATGCAATGCACACCCGACATAACTTCCCAAGATTGCAAAACATGTCT 659
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 600 TGTTTACATGCTGATGCAATGCACACCAGACATAACTTCCCAAGATTGCAAGACATGTCT 659
Query 660 GGGAGAATGCGTGACGCTTTTCAAAGAACAGGTTTGGGGAAGACAAGGAGGCGAGGTTTA 719
|||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct 660 TGGAGAATGTGTGACGCTTTTTAAAGAACAGGTTTGGGGAAAACAAGGAGGCGAGGTTTA 719
Query 720 TCGTCCGAGCTGTTTTTTCAGGTGGGATCTATATGCTTTCCATGGTGCTTTTGATAATGT 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 TCGTCCGAGCTGTTTTTTCAGGTGGGATCTATATGCTTTCCATGGTGCTTTTGATAATGT 779
Query 780 AACAAGAGTTCCTGCGCCTCCTCGACCTCAAGCTCAGGGAAACGAGAGCTCTATAACAAA 839
|||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 780 AACAAGAGTTTCTGCGCCTCCTCGACCTCAAGCTCAGGGAAAAGAGAGCTCTATAACAGA 839
Query 840 AAAGAAAGGAAGAAGCATTGGATATGGTGGAATTATTGCAATAGTTGTGGTTCTTACTTT 899
||||||||||||||||||||||||| |||||||||| || ||| ||||||||||||||||
Sbjct 840 AAAGAAAGGAAGAAGCATTGGATATCGTGGAATTATCGCGATAATTGTGGTTCTTACTTT 899
Query 900 CATTAATATTTTGGTGTTTATTGGCTATATCAAAGTCTATGGACGTAGGAAAGAATCATA 959
||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 900 CATTAATCTTTTGGTGTTTATTGGCTATATCAAAGTCTATGGACGGAGGAAAGAATCATA 959
Query 960 CAACAAAATCAATGTTGGAAGTGCAGAGTACTCTGATTCTGATGGTCAATTCATGTTACG 1019
|||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |
Sbjct 960 CAACAAAATCAATGTTGGGAGTGCAGAGTACTCTGATTCTGATGGTCAATTTATGTTAAG 1019
Query 1020 GTTTGATCTTGGTATGGTCTTAGCGGCTACCGATGAATTCTCATCGGAAAATACGCTTGG 1079
||||||| |||||||| ||||| ||| || |||| ||||| || ||||| ||||||||
Sbjct 1020 GTTTGATATTGGTATGATCTTAATGGCAACTAATGACTTCTCGTCTGAAAACACGCTTGG 1079
Query 1080 CCAAGGTGGATTTGGTACGGTCTATAAGGGGACATTACTAAACGGGCAAGAGGTAGCGGT 1139
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct 1080 CCAAGGTGGATTTGGTACGGTCTATAAGGGGAAATTACTAAACGGGCAAGAGATAGCGGT 1139
Query 1140 GAAGAGGTTAACAAAAGGTTCAGGACAAGGAGATATAGAGTTCAAGAATGAGGTTTCGCT 1199
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1140 GAAGAGACTAACAAAAGGTTCAGGACAAGGAGATATAGAGTTCAAGAATGAGGTTTCACT 1199
Query 1200 ATTGACAAGACTCCAGCATAGGAATCTAGTTAAGCTTCTTGGATTTTGTAATGAAGGAGA 1259
||||||||||||||| |||||||||||||||||||||||||| || |||||||| |||||
Sbjct 1200 ATTGACAAGACTCCAACATAGGAATCTAGTTAAGCTTCTTGGGTTCTGTAATGACGGAGA 1259
Query 1260 TGAACAGATTCTTGTTTACGAGTTCGTTCCCAATTCAAGTCTTGATCACTTTATCTTCGA 1319
||||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||
Sbjct 1260 TGAACAGATTCTTGTCTACGAGTTTGTCCCCAACTCAAGTCTTGATCACTTTATCTTCGA 1319
Query 1320 TGATGAGAAGCGTTCACTTCTTACATGGGAGATGAGATACAGAATTATAGAAGGCATTGC 1379
||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1320 TGAAGAGAAGCGTTCACTTCTTACATGGGAGATGAGATGCAGAATTATAGAAGGCATTGC 1379
Query 1380 TCGAGGTCTTCTTTATCTTCATGAAGACTCGCAGCTAAAGATTATTCACCGAGACTTGAA 1439
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 1380 TCGAGGTCTTCTTTATCTTCATGAAGATTCTCAGCTAAAGATTATTCACCGAGACTTGAA 1439
Query 1440 GGCAAGCAACATACTTTTAGACGCAGAGATGAACCCTAAAGTTGCAGATTTCGGGACAGC 1499
|||||| ||||| |||||||| ||||||||||| ||||||||| ||||||| ||||||||
Sbjct 1440 GGCAAGTAACATCCTTTTAGATGCAGAGATGAATCCTAAAGTTTCAGATTTTGGGACAGC 1499
Query 1500 GAGGTTGTTCGACTCCGATGAGACTCGAGCTGAAACAAAAAGAATAGCTGGAACCCGTGG 1559
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1500 GAGGTTGTTCGACTCCGATGAGACCCGAGCTGAAACAAAAAGAATAGCTGGAACCCGTGG 1559
Query 1560 ATATATGGCTCCTGAATACTTGAATCATGGACAAATCTCAGCTAAATCTGACGTTTATAG 1619
|||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1560 ATATATGGCTCCCGAGTACTTGAATCATGGGCAAATCTCAGCTAAATCTGACGTTTATAG 1619
Query 1620 CTTCGGTGTTATGCTTCTAGAGATGATTAGTGGTGAAAGAAACAATAGCTTCGAAGGAGA 1679
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 1620 CTTCGGTGTTATGCTTCTAGAGATGATAAATGGTGAAAGAAACAATAGCTTCGAAGGAGA 1679
Query 1680 AGGACTTGCAGCTTTTGCATGGAAAAGATGGGTTGAAGGAAAGCCTGAGATTATAATTGA 1739
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1680 AGGACTTGCAGCATTTGCATGGAAAAGATGGGTTGAAGGAAAGCCTGAGATTGTAATTGA 1739
Query 1740 TCCGTTCTTAATAGAGAAACCAAGAAATGAGATCATAAAGTTGATCCAAATTGGTTTGTT 1799
||| ||||| |||||||| |||||||| |||||||||||| |||| || ||||| |||||
Sbjct 1740 TCCTTTCTTGATAGAGAATCCAAGAAACGAGATCATAAAGCTGATTCATATTGGCTTGTT 1799
Query 1800 GTGTGTTCAAGAGAATCCAACAAAGAGACCAACAATGAGCTCTGTAATAATTTGGCTTGG 1859
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1800 GTGTGTTCAAGAGAATCCAACAAAGAGACCAACCATGAGCTCTGTAATAATTTGGCTTGG 1859
Query 1860 TAGTGAGACAAAT-ATCATTCCTTTACCTAAAGCTCCTGCTTTCACTGGAAGTCGATCCC 1918
|||||||| | | |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1860 CAGTGAGACTA-TCATCATTCCTTTACCTAAAGCTCCTGCTTTCACTGGAAGTCAATCCC 1918
Query 1919 AATCTGAAATTGGTGCAATGTCAATGAGCGACGATGTCTTCACGGAGTTAAGTTGTCGTT 1978
||||||||| |||| ||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 1919 AATCTGAAAATGGTATAATGTCAATGAGCGACGATGTCTTCACAGAGTTGAGTTGTCGTT 1978
Query 1979 GA 1980
||
Sbjct 1979 GA 1980
> Ahg913379 jgi|Araly1|913379|Al_scaffold_0001_3633
Length=1965
Score = 2163 bits (1171), Expect = 0.0
Identities = 1734/2001 (87%), Gaps = 57/2001 (3%)
Strand=Plus/Plus
Query 1 ATGGGGAAATACTCT-GTTTTGATGATCTTTATCGCTTCTTCTCTTCTTATTGTCCTTCA 59
|||||||||| | || | |||||||||||| || |||||||||||||| ||||||||||
Sbjct 1 ATGGGGAAATGC-CTAGCTTTGATGATCTTCCTCTCTTCTTCTCTTCTTTTTGTCCTTCA 59
Query 60 AAACGTGGAAATCGTTAACGCCGTC-GGATGTACCGGAAGCTTCTTCAACGGTAATAGCA 118
|||| | ||| |||||||||| ||| || ||| |||||||||||||||| ||||| ||||
Sbjct 60 AAACCTCGAAGTCGTTAACGCAGTCAGG-TGTTCCGGAAGCTTCTTCAAAGGTAACAGCA 118
Query 119 GCTAC-GCTCAGAATCGCCGCGATCTCTTCTCTACTCTTCCTAATAAAGTCGTCACCAAC 177
||||| || ||||||||| | | ||||||||||||||| ||||||||||||||||||||
Sbjct 119 GCTACAGC-GAGAATCGCCACAAGCTCTTCTCTACTCTTGCTAATAAAGTCGTCACCAAC 177
Query 178 GGTGGATTCTACAACTCTTCACTCGGCAAAAGTCCCAACATAGTTCATGCTGTTGCT-CT 236
||||||||||||||| |||||||||| ||||||||||||| |||| | ||| ||| | ||
Sbjct 178 GGTGGATTCTACAACGCTTCACTCGGTAAAAGTCCCAACACAGTTTACGCTCTTG-TCCT 236
Query 237 CTGCGGAAGAGGATACGAGCAACAAGCTTGTAT-CAGGTGTGTCGACAGTGCGA-TACAG 294
|| | |||||| ||| |||||||||| ||| | ||| |||||||| | | || | |||
Sbjct 237 TTGTGCAAGAGGTTACCAGCAACAAGCGTGT-TCCAGTTGTGTCGAAAAAGTGACT-CAG 294
Query 295 GGTATACTAACGACAACGAGTTGTCTAAACCGCGTGGATTCATTCACGTGGGACAAAGAC 354
|| || || | | ||||||||| | | ||| ||||| | |||| ||||||||| |||
Sbjct 295 GG--GAC--AC-A-ATCGAGTTGTCCAGATCGCATGGATACGTTCAAGTGGGACAATGAC 348
Query 355 GAGGAAGACAATGTTTCTTGTCTTGTAAGTACCTCAAACCACTCAACTTTTGGGAAC-CT 413
|| |||||| ||||||||||||||||| || || ||||| |||||||||| ||| || ||
Sbjct 349 GACGAAGACCATGTTTCTTGTCTTGTACGTTCCACAAACTACTCAACTTTAGGG-ACGCT 407
Query 414 CGAGCTTAGACCTTCTGTTAGATACCAAAGTCCGA-ATAGTATCGAGCCATCGAAAAACA 472
| ||||| ||||| |||||| || || |||||| | |||||| || ||||| | |||
Sbjct 408 CCAGCTTGGACCTCCTGTTATATTCCCAAGTCC-ACTTAGTATAGATCCATCCAGGGACA 466
Query 473 TGACTCTTTTCGAACAAGA-ATGGAATGCAATGGCTAATCGGACCGTCGAGTCTGCCA-C 530
|||| ||||| ||||| | |||| ||| || |||||||||| | ||| |||||| |
Sbjct 467 TGACCCTTTTTAAACAACAGCGGGAA-ACAACGGTTAATCGGACCCTTGAGGCTGCCACC 525
Query 531 AGAAGCTGAAACTTCCTCGGTACTTAAGTACTATAGTGCCGAAAAAGCCGAGTTCACAGA 590
| ||||||||| |||||||||| |||||||||||||||| | | ||||||||||||| ||
Sbjct 526 A-AAGCTGAAAATTCCTCGGTAATTAAGTACTATAGTGCGGTACAAGCCGAGTTCACGGA 584
Query 591 GTTTCCAAATGTTTACATGCTGATGCAATGCACACCCGACATAACTTCCCAAGATTGCAA 650
|||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||
Sbjct 585 GTTTCCAAATGTTTACATGCTGATGCAATGCACACCAGACATATCTTCCCGAGATTGCAA 644
Query 651 AACATGTCTGGGAGAATGCGTGACGCT-TTTCA-AAGAACAGGTTTGGGGAAGACAAGGA 708
| |||| ||||||| ||||||||| | ||| | || ||||| |||||||||| ||||||
Sbjct 645 GAGATGTTTGGGAGATTGCGTGACG-TATTTTACAA-AACAGTTTTGGGGAAGGCAAGGA 702
Query 709 GGCGAGGTTTA-TCGTCCGAGCTGTTTTTTCAGGTGGGATCTATATGCTTTCCATGGTGC 767
|| |||| ||| |||||||| |||| |||||||||||||||||||||| |||||||||||
Sbjct 703 GGAGAGG-TTAGTCGTCCGAACTGTGTTTTCAGGTGGGATCTATATGCGTTCCATGGTGC 761
Query 768 TTTTGATAATGTAACAAGAGTTCCTGCGCCTCCTCGACCTCAAGCTCAGGGAAACGAGAG 827
||||||||||||||||||||||||||| ||||||| | |||| | ||| | |||
Sbjct 762 TTTTGATAATGTAACAAGAGTTCCTGCACCTCCTC-A--ACAAG-T-----AAAGGGGAG 812
Query 828 CTCTATAACAAAAAAGAAAGGAAGAAGCATTGGATATGGTGGAATTATTGCAATAGTTGT 887
||||||||| |||||||||||||||||||||| ||| ||||||||| ||| |||
Sbjct 813 TTCTATAACAGAAAAGAAAGGAAGAAGCATTGGCTATAACAAAATTATTGCGATAATTGC 872
Query 888 GGTTCTTACTTTCATTAATATTTTGGTGTTTATTGGCTAT-ATCAAAGTCTATGGACGTA 946
||||| ||||||||||||||||||||||| |||||| | | || ||||||||| | | |
Sbjct 873 GGTTCCTACTTTCATTAATATTTTGGTGTATATTGG-TCTCATAAAAGTCTAT-G-C-TT 928
Query 947 GGA-AAG--AATCATACAACAAAATCA-ATGTTGGAAGTGCAGAGTACTCTGATTCTGAT 1002
||| ||| ||||| ||||| ||| | ||||||| || |||||||||||||||||||||
Sbjct 929 GGAGAAGAAAATCAAACAACGGAAT-AGATGTTGGTAGGGCAGAGTACTCTGATTCTGAT 987
Query 1003 GGTCAATTCATGTTACGGTTTGATCTTGGTATGGTCTTAGCGGCTACCGATGAATTCTCA 1062
|| ||||| |||||||||||||||||||||||| |||||| ||| || |||| || ||
Sbjct 988 GGACAATTTATGTTACGGTTTGATCTTGGTATGATCTTAGTGGCAACTAATGACTTTTCG 1047
Query 1063 TCGGAAAATACGCTTGGCCAAGGTGGATTTGGTACGGTCTATAAGGGGACATTACTAAAC 1122
|| || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 1048 TCTGAGAATACGCTTGGCCAGGGTGGATTTGGTACTGTCTATAAGGGGACATTACTAAAC 1107
Query 1123 GGGCAAGAGGTAGCGGTGAAGAGGTTAACAAAAGGTTCAGGACAAGGAGATATAGAGTTC 1182
||||||||| |||| |||||||| |||||| |||||| || ||||||||||| |||||
Sbjct 1108 GGGCAAGAGATAGCCGTGAAGAGACTAACAAGAGGTTCGGGGCAAGGAGATATGGAGTTT 1167
Query 1183 AAGAATGAGGTTTCGCTATTGACAAGACTCCAGCATAGGAATCTAGTTAAGCTTCTTGGA 1242
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 1168 AAGAATGAGGTTTCTCTATTGACAAGACTCCAACATAGGAATCTGGTTAAGCTTCTTGGG 1227
Query 1243 TTTTGTAATGAAGGAGATGAACAGATTCTTGTTTACGAGTTCGTTCCCAATTCAAGTCTT 1302
|| |||||||||||||||||| ||||||||||||||||||| || |||||||||||||||
Sbjct 1228 TTCTGTAATGAAGGAGATGAAGAGATTCTTGTTTACGAGTTTGTCCCCAATTCAAGTCTT 1287
Query 1303 GATCACTTTATCTTCGATGATGAGAAGCGTTCACTTCTTACATGGGAGATGAGATACAGA 1362
|||||||||||||||||||| ||||||||||| ||||||||||||||| |||||| ||||
Sbjct 1288 GATCACTTTATCTTCGATGAAGAGAAGCGTTCGCTTCTTACATGGGAGCTGAGATGCAGA 1347
Query 1363 ATTATAGAAGGCATTGCTCGAGGTCTTCTTTATCTTCATGAAGACTCGCAGCTAAAGATT 1422
||||||||||||||||||||||||||||||||||| |||||||| || ||||| ||||||
Sbjct 1348 ATTATAGAAGGCATTGCTCGAGGTCTTCTTTATCTCCATGAAGATTCTCAGCTGAAGATT 1407
Query 1423 ATTCACCGAGACTTGAAGGCAAGCAACATACTTTTAGACGCAGAGATGAACCCTAAAGTT 1482
||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||
Sbjct 1408 ATTCACCGAGACTTGAAGGCAAGCAACATTCTTTTAGACGCTGAGATGAACCCTAAGGTT 1467
Query 1483 GCAGA-TTTCGGGACAGCGAGGTTGTTCGACTCCGATGAGACTCGAGCTGAAACAAAAAG 1541
|| || ||| ||||||||||| |||||||| | |||||||||||||||||||||| | |
Sbjct 1468 GCCGACTTT-GGGACAGCGAGATTGTTCGAAGCTGATGAGACTCGAGCTGAAACAAGACG 1526
Query 1542 AATAGCTGGAACCCGTGGATATATGGCTCCTGAATACTTGAATCATGGACAAATCTCAGC 1601
|||||||||||||||||| ||||||||||| |||||| ||||||| ||||||||||||||
Sbjct 1527 AATAGCTGGAACCCGTGGGTATATGGCTCCCGAATACCTGAATCACGGACAAATCTCAGC 1586
Query 1602 TAAATCTGACGTTTATAGCTTCGGTGTTATGCTTCTAGAGATGATTAGTGGTGAAAGAAA 1661
||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct 1587 TAAATCTGACGTTTATAGCTTTGGTGTTATGCTTCTAGAGATAATAAGTGGTGAAAGAAA 1646
Query 1662 CAATAGCTTCGAAGGAGAAGGACTTGCAGCTTTTGCATGGAAAAGATGGGTTGAAGGAAA 1721
||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 1647 CAATAGCTTCGTAGGAGAAGGACTTGCCGCTTTTGCATGGAAGAGATGGGTTGAAGGAAA 1706
Query 1722 GCCTGAGATTATAATTGATCCGTTCTTAATAGAGAAACCAAGAAATGAGATCATAAAGTT 1781
|||||| ||||||||||| ||||| ||||| |||||||| |||||||| |||||
Sbjct 1707 TACTGAGAGTATAATTGATCATTTCTTGATAGATCGGCCAAGAAACGAGATCATTAAGTT 1766
Query 1782 GATCCAAATTGGTTTGTTGTGTGTTCAAGAGAATCCAACAAAGAGACCAACAATGAGCTC 1841
|||||||||||||||||||||||||||||||||| || ||||||||||||| || |||||
Sbjct 1767 GATCCAAATTGGTTTGTTGTGTGTTCAAGAGAATGCAGCAAAGAGACCAACCATAAGCTC 1826
Query 1842 TGTAATAATTTGGCTTGGTAGTGAGACAAAT-ATCATTCCTTTACCTAAAGCTCCTGCTT 1900
||| ||| |||||||||||||||| || | | |||||||||||||||| |||||||||||
Sbjct 1827 TGTTATAGTTTGGCTTGGTAGTGAAACTA-TCATCATTCCTTTACCTAGAGCTCCTGCTT 1885
Query 1901 TCACTGGAAGTCGATCCCAATCTGA-AATTGGTGCAATGTCAATGAGCGACGATGTCTTC 1959
||||| |||||| ||| |||||||| ||| ||| || |||||||||||| |||||||||
Sbjct 1886 TCACTAGAAGTCAATCTCAATCTGAGAAT-GGTATAAGGTCAATGAGCGATGATGTCTTC 1944
Query 1960 ACGGAGTTAAGTTGTCGTTGA 1980
|||||||| ||||||||||||
Sbjct 1945 ACGGAGTTGAGTTGTCGTTGA 1965
> Ahg943226 jgi|Araly1|943226|scaffold_603770.1
Length=1930
Score = 1916 bits (1037), Expect = 0.0
Identities = 1453/1648 (88%), Gaps = 52/1648 (3%)
Strand=Plus/Plus
Query 355 GAGG-AA-GACAATGTTTCTTGTCTTGTAAGTACCTCAAACCACTCAACTTTTGGGAACC 412
|||| || ||| |||| ||||||||||| || |||||||||| || |||||||||||||
Sbjct 289 GAGGCAATGACGATGTAACTTGTCTTGTACGTTCCTCAAACCAGTCCACTTTTGGGAACC 348
Query 413 TCGAGCTTAGACCTTCTGTTAG-AT-ACCAAAGTCCGA-ATAGTATCGAGCCATCGAAAA 469
|| |||||| |||| ||||| | || || |||||| | ||| ||||||| |||| ||||
Sbjct 349 TCCAGCTTAAACCTCCTGTT-GTATGGCC-AAGTCC-AGATACTATCGAGTCATCTAAAA 405
Query 470 ACATGACTCTTTTCGAACAAGAAT-GGAATGCAATGGCTAATCGGACCGTCGAGTCTGCC 528
|| ||| ||||||||||||| | | |||| | ||||| |||||||||| || || ||||
Sbjct 406 ACTTGAGTCTTTTCGAACAACAGTGGGAA-GAAATGGTTAATCGGACCCTCAAGGCTGCG 464
Query 529 ACAGAAGCTGAAACTTCCTCGGTACTTAAGTACTATAGTGCCGAAAAAGCCGAGTTCACA 588
||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||
Sbjct 465 ACAGAAGCTGAAACTTCCTCGGTACTTAAGTACTACAGCGCCGAAAAAGCCGGGTTCACG 524
Query 589 GAGTTTCCAAATGTTTACATGCTGATGCAATGCACACCCGACATAACTTCCCAAGATTGC 648
||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 525 GAGTTTCCAGATGTTTACATGCTGATGCAATGCACACCCGACATAACTTCCCGAGATTGC 584
Query 649 AAAAC-ATGTCTGGGAGAATGCGTGACGCT-TTTCAAAGAACAGGTT-T-GGGGAAGACA 704
|| | |||| ||||||| | ||||| | | ||| |||| || || | ||||||| |
Sbjct 585 -AAGCAATGTTTGGGAGATTCCGTGATG-TATTT--TAGAAAAGATTATATGGGAAGAAA 640
Query 705 AGGAGGCGA-GGTTTA-TCGTCCGAGCTGTTTTTTCAGGTGGGATCTATATGCTTTCCAT 762
||||||| | || || || ||| ||||||| |||||| |||||||||||||||||||||
Sbjct 641 AGGAGGC-ATGG-CTAGTCTTCCAAGCTGTTATTTCAGATGGGATCTATATGCTTTCCAT 698
Query 763 GGTGCTTTTGATAATGTAACAAGAGTTCCTG---CGCCTCCTCGACCTCAAG-CTCAGGG 818
|||||||||||||||||| |||||||||| | ||||||||||||| || ||||||
Sbjct 699 AATGCTTTTGATAATGTAACCAGAGTTCCTGCACCTCCTCCTCGACCTC-AGTCTCAGGA 757
Query 819 AAACGAGAGCT-CTATAACA-AAAAAGAAAGGAAGAAGCATTGGATATGGTGGAATTATT 876
||| ||||||| | |||||| | ||| ||||||| ||||||||| ||||| ||||||||
Sbjct 758 AAAGGAGAGCTGC-ATAACAGAGAAA-AAAGGAAAAAGCATTGGGTATGGCGGAATTATC 815
Query 877 GCAATAGTTGTGGTTCTTACTTTCATTAATATTTTGGTGTTTATTGGCTAT-ATCAAAGT 935
|| ||| |||||||||||||||| || |||||||||||||||||||||| | ||||||||
Sbjct 816 GCGATAATTGTGGTTCTTACTTTTATAAATATTTTGGTGTTTATTGGCT-TCATCAAAGT 874
Query 936 CTATGGACGTAGGAAAGAATCATACAACAAAATCAATGTTGGAAGTGCAGAGTACTCTGA 995
||||| ||| ||| ||| || |||| |||||||| |||||||||||||||||
Sbjct 875 CTATGCACGGAGG-GGGAA--AT-----TAAAT-AATGTTGGGAGTGCAGAGTACTCTGA 925
Query 996 TTCTGATGGTCAATTCATGTTACGGTTTGATCTTGGTATGGTCTTAGCGGCTACCGATGA 1055
|||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||
Sbjct 926 TTCTGATGGTCAATTCATGTTACGGTTTGATCTTGGTATGATCTTAATGGCAACCGATGA 985
Query 1056 ATTCTCATCGGAAAATACGCTTGGCCAAGGTGGATTTGGTACGGTCTATAAGGGGACATT 1115
||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 986 CTTCTCTTCTGAAAATACGCTTGGCCAAGGTGGATTTGGTACGGTCTATAAGGGGACATT 1045
Query 1116 ACTAAACGGGCAAGAGGTAGCGGTGAAGAGGTTAACAAAAGGTTCAGGACAAGGAGATAT 1175
| |||||||||||| |||||||| ||||| |||||||||| |||||||||||||||||
Sbjct 1046 CCCAAACGGGCAAGAAGTAGCGGTCAAGAGACTAACAAAAGGATCAGGACAAGGAGATAT 1105
Query 1176 AGAGTTCAAGAATGAGGTTTCGCTATTGACAAGACTCCAGCATAGGAATCTAGTTAAGCT 1235
||||| |||||||||||||| || |||||||||||||| ||||||||||| ||||||||
Sbjct 1106 GGAGTTTAAGAATGAGGTTTCACTCTTGACAAGACTCCAACATAGGAATCTTGTTAAGCT 1165
Query 1236 TCTTGGATTTTGTAATGAAGGAGATGAACAGATTCTTGTTTACGAGTTCGTTCCCAATTC 1295
|| ||| || |||||||||||||||||| |||||||||| |||||||| || ||||| ||
Sbjct 1166 TCATGGGTTCTGTAATGAAGGAGATGAAGAGATTCTTGTCTACGAGTTTGTCCCCAACTC 1225
Query 1296 AAGTCTTGATCACTTTATCTTCGATGATGAGAAGCGTTCACTTCTTACATGGGAGATGAG 1355
||||||||||||||||||||| ||||| || |||||||| ||||||||||||||| ||||
Sbjct 1226 AAGTCTTGATCACTTTATCTTTGATGAAGACAAGCGTTCTCTTCTTACATGGGAGGTGAG 1285
Query 1356 ATACAGAATTATAGAAGGCATTGCTCGAGGTCTTCTTTATCTTCATGAAGACTCGCAGCT 1415
| |||||||||||||||||||||| ||||||||| ||||| |||||||| || ||| |
Sbjct 1286 GTTCAGAATTATAGAAGGCATTGCTAAAGGTCTTCTCTATCTCCATGAAGATTCTCAGAT 1345
Query 1416 AAAGATTATTCACCGAGACTTGAAGGCAAGCAACATACTTTTAGACGCAGAGATGAACCC 1475
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1346 GAAGATTATTCATAGAGACTTGAAGGCAAGCAACATACTTTTAGACGCAGAGATGAACCC 1405
Query 1476 TAAAGTTGCAGATTTCGGGACAGCGAGGTTGTTCGACTCCGATGAGACTCGAGCTGAAAC 1535
||||||||||||||||||||| || ||| |||||||| ||||||||||||||||||||||
Sbjct 1406 TAAAGTTGCAGATTTCGGGACTGCTAGGCTGTTCGACACCGATGAGACTCGAGCTGAAAC 1465
Query 1536 AAAAAGAATAGCTGGAACCCGTGGATATATGGCTCCTGAATA-CTTGAATCATGGACAAA 1594
|| |||||||||||||||||| |||||||||||||| ||||| || || ||| || ||||
Sbjct 1466 AAGAAGAATAGCTGGAACCCGCGGATATATGGCTCCCGAATATCT-GAGTCACGGGCAAA 1524
Query 1595 TCTCAGCTAAATCTGACGTTTATAGCTTCGGTGTTATGCTTCTAGAGATGATTAGTGGTG 1654
|||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1525 TCTCGGCTAAATCTGACGTTTATAGCTTTGGTGTTATGCTTCTAGAGATGATAAGTGGTG 1584
Query 1655 AAAGAAACAATAGCTTCGAAGGAGAAGGACTTGCAGCTTTTGCATGGAAAAGATGGGTTG 1714
||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||
Sbjct 1585 GAAGAAACAATAGCTTTGAAGGAGAAGGACTTGCAGCTTTTACATGGAAGAGATGGGTTG 1644
Query 1715 AAGGAAAGCCTGAGATTATAATTGATCCGTTCTTAATAGAGAAA-CCAAGAAATGAGATC 1773
|||||||||||||||||||||||||||| || || ||||| ||| |||||||| ||||||
Sbjct 1645 AAGGAAAGCCTGAGATTATAATTGATCCTTTATTGATAGA-AAATCCAAGAAACGAGATC 1703
Query 1774 ATAAAGTTGATCCAAATTGGTTTGTTGTGTGTTCAAGAGAATCCAACAAAGAGACCAA-C 1832
| ||||||||||| ||||| ||||||||||||||||||||| || |||||||||||| |
Sbjct 1704 GTCAAGTTGATCCAGATTGGATTGTTGTGTGTTCAAGAGAATGCAGCAAAGAGACCAAAC 1763
Query 1833 AATGAGCTCTGTAATAATTTGGCTTGGTAGTGAGACAAAT-ATCATTCCTTTACCTAAAG 1891
| ||||||||||||||||||||||||| |||||||| | | |||||||||||||||||||
Sbjct 1764 A-TGAGCTCTGTAATAATTTGGCTTGGCAGTGAGACTA-TCATCATTCCTTTACCTAAAG 1821
Query 1892 CTCCTGCTTTCACT-GGAAGTCGATCCCAATCTGAAATTGGTGCAATGTCAATGAGCGAC 1950
|||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct 1822 CTCCTGCTTTCACTTGGA-GTCGATCCCAATCTGAAAGTGGTGCAATGTCAATGAGCGAC 1880
Query 1951 GATGTCTTCACGGAGTTAAGTTGTCGTT 1978
||||||||||| ||||| ||||||||||
Sbjct 1881 GATGTCTTCACAGAGTTGAGTTGTCGTT 1908
> Ahg895520 jgi|Araly1|895520|Al_scaffold_0006_3516
Length=1977
Score = 850 bits (460), Expect = 0.0
Identities = 744/880 (85%), Gaps = 24/880 (3%)
Strand=Plus/Plus
Query 991 TCTGATTCTGATGGTCAATTC-ATGTTACGGTTTGATCTTGGTATGGTCTTAGCGGCTAC 1049
|||||||||||||||||| || | | || | ||||||||||| ||| ||||| || ||
Sbjct 952 TCTGATTCTGATGGTCAA-TCTACGCTAAGATTTGATCTTGGCATGATCTTAATTGCAAC 1010
Query 1050 CGATGAATTCTCATCGGAAAATACGCTTGGCCAAGGTGGATTTGGTA-CGGTCTATAAGG 1108
|||||| ||||| | ||||||| |||||| |||||||||||||| | | ||||| ||||
Sbjct 1011 CGATGAGTTCTCCCCTGAAAATAAGCTTGGACAAGGTGGATTTGG-ATCTGTCTACAAGG 1069
Query 1109 GGACATTACTAAACGGGCAAGAGGTAGCGGTGAAGAGGTTAACAAAAGGTTCAGGACAAG 1168
||| ||||| | |||||||||| ||||||| ||||| ||| | | ||||||||||||||
Sbjct 1070 GGATATTACCGAGCGGGCAAGAGATAGCGGTAAAGAGATTAGCTAGAGGTTCAGGACAAG 1129
Query 1169 GAGATA-TAGAGTTCAAGAATGAGGT-TTCGCTATTGACAAGACTCCAGCATAGGAATCT 1226
|||| | ||||||| |||||||| || || || |||||||||||||| |||||||||||
Sbjct 1130 GAGA-ACTAGAGTTAAAGAATGAAGTCTT-ACTTTTGACAAGACTCCAACATAGGAATCT 1187
Query 1227 AGTTAAGCTTCTTGGATTTTGTAATGAAGGAGATGAACAGATTCTTGTTTACGAG-TTCG 1285
|||||||||||||||||| |||||||||||| | || ||||||||||||||||| | |
Sbjct 1188 AGTTAAGCTTCTTGGATTCTGTAATGAAGGAAACGAGGAGATTCTTGTTTACGAGCAT-G 1246
Query 1286 TTCCCAATTCAAGTCTTGATCACTTTATCTTCGATGATGAGAAGCGTTCACTTCTTACAT 1345
||||||||||||||||||||||||||||||||||||| || ||||| | ||||||||||
Sbjct 1247 TTCCCAATTCAAGTCTTGATCACTTTATCTTCGATGAAGATAAGCGATGGCTTCTTACAT 1306
Query 1346 GGGA-GATGAGATACAGAATTATAGAAGGCA-TTGCTCGAGGTCTTCTTTATCTTCATGA 1403
|||| | |||| |||||||| |||||||| | |||| |||| ||||||||||| |||||
Sbjct 1307 GGGATG-TGAGGTACAGAATCATAGAAGG-AGTTGCAAGAGGGCTTCTTTATCTCCATGA 1364
Query 1404 AGACTCGCAGCTAAAGATTATTCACCGAGACTTGAAGGCAAGCAACATACTTTTAGACGC 1463
||| || ||| | | |||||||||| ||||||||||||||||||| || |||||||||||
Sbjct 1365 AGATTCTCAGTTGAGGATTATTCACAGAGACTTGAAGGCAAGCAATATCCTTTTAGACGC 1424
Query 1464 AGAGATGAACCCTAAAGTTGCAGA-TTTCGGGACAGCGAGGTTGTTCGAC-TCCGATGAG 1521
||||||||||||||||||||||| ||| |||| ||||||||||| || | ||||||
Sbjct 1425 GGAGATGAACCCTAAAGTTGCAGACTTT-GGGATGGCGAGGTTGTTTAACATG-GATGAG 1482
Query 1522 ACTCGAGCTGAAACAAAAAGAATAGCTGGAACCCGTGGATATATGGCTCCTGAATACTTG 1581
||||||| || |||| ||| ||| ||||||| |||||||||||||| || ||| |
Sbjct 1483 ACTCGAGGAGAGACAAGCAGAGTAGTTGGAACCTACGGATATATGGCTCCGGAGTACGTA 1542
Query 1582 A-ATCATGGACAAATCTCAGCTAAATCTGACGTTTATAGCTTCGGTGTTATGCTTCTAGA 1640
| | ||||||||| |||||||||||||||| |||||||||||||||||||||||| | ||
Sbjct 1543 AGA-CATGGACAATTCTCAGCTAAATCTGATGTTTATAGCTTCGGTGTTATGCTTTTGGA 1601
Query 1641 GATGATTAGTGGTGAAAGAAACAATAGCTTCGAAGGAGAAGGACTTGCAGCTTTTGCATG 1700
|||||| |||||||||| ||| || | ||| ||| |||||||||| |||||||||||||
Sbjct 1602 GATGATAAGTGGTGAAAAAAATAAGAACTTTGAAACAGAAGGACTTCCAGCTTTTGCATG 1661
Query 1701 GAAAAGATGGGTTGAAGGAAAGCCTGAGATTATAATTGATCCGTT-CTTAATA-GAGAAA 1758
||| |||||| | |||||| ||| ||||| |||||| || || || ||||| | |||||
Sbjct 1662 GAAGAGATGGATAGAAGGAGAGCTTGAGAGTATAATCGACCC-TTACTTAA-ACGAGAAT 1719
Query 1759 CCAAGAAATGAGATCATAAAGTTGATCCAAATTGGTTTGTTGTGTGTTCAAGAGAATCCA 1818
|| ||||| |||||||||||||| ||| | ||||||||||||||||||||||||||| ||
Sbjct 1720 CCGAGAAACGAGATCATAAAGTTAATCGAGATTGGTTTGTTGTGTGTTCAAGAGAATGCA 1779
Query 1819 ACAAAGAGACCAACAATGAGCTCTGTAATAATTTGGCTTG 1858
||||||||||||| |||| ||| |||||| ||||||||
Sbjct 1780 GCAAAGAGACCAACCATGAACTCAGTAATAGCTTGGCTTG 1819
> Ahg490098 jgi|Araly1|490098|fgenesh2_kg.6__3232__AT4G04510.1
Length=1985
Score = 737 bits (399), Expect = 0.0
Identities = 1376/1825 (75%), Gaps = 158/1825 (9%)
Strand=Plus/Plus
Query 141 TCTCTTCTCTACTCTTCCTAATAAAGTCGTCACCAACGGTGGATTCTACAACT-CTTCAC 199
|||||||||||||||| || |||||||| ||| ||||||||||||||||| | ||||||
Sbjct 138 TCTCTTCTCTACTCTTTCTGATAAAGTCACCACAAACGGTGGATTCTACAA-TGCTTCAC 196
Query 200 TCGGCA-AAAGTCCCAACATAGTTCATGCTGTTGCTCTCTGCGGAAGAGGA-TACGAGCA 257
|| | | ||| | || |||| | || || ||||| ||||| || |||||||
Sbjct 197 TC-G-ATGGAGT-TC-AC---GTTC-T--TG--GC-CTCTGTAGAAGA-GACTACGAGCG 242
Query 258 ACAAGCTTGTATCAGGTGTGTCG-ACAGTGCGATACAGGGTATACTAACGACAACG-AGT 315
|||| |||||||| || |||| | | | | || | | | | | | | || | |||
Sbjct 243 GCAAGGTTGTATCAACTGCGTCGAAAAAT-CCATTC--GACAGA-TTA--A-AA-GAAGT 294
Query 316 TG-TCTAAACCGCGTGGATTCAT-TCACGTGGGACAAAGACGA-GGAAGA-CAATGTTTC 371
|| ||| ||||| || || || | || ||| ||| || || || ||| | ||||||
Sbjct 295 TGTTCT-AACCGTGTTGAATCGTACCA-TTGGAACAGTGATGATGG-AGAGC-GTGTTTC 350
Query 372 TTGTCTTGTAAGTACCTC-AAACCACTCAACTTTTGGGA-ACCTCGAGCTTAGACCTTCT 429
|||||||||| ||||| | || | | ||||||| | ||| | ||||||||| |||| ||
Sbjct 351 TTGTCTTGTACGTACCACGAATCGA-TCAACTTATCGGATA-CTCGAGCTTGGACCAGCT 408
Query 430 GTTAGAT-A-CCAAAGTCCGAATAG-TATCGAGC-CAT-CG--AAAAACATGACTCTTTT 482
| || | || || ||| | | |||||| | ||| || || ||||||||||||||
Sbjct 409 -ACAAATGACCCGAA-TCC-TGTTGTTATCGA-CACATCCGCTAAGAACATGACTCTTTT 464
Query 483 -CGAACAAGAAT-GGAATGCAATGGCTAATCGGACCG-TCGAGTCTGCCACAGAAGCTGA 539
|| ||||||| |||| ||||||| | | |||| || ||||| ||| | | | |||
Sbjct 465 CCG-CCAAGAATGGGAA-GCAATGGTTGACCGGA-CGCTCGAGGCTG-TA-ACCA-TTGA 518
Query 540 AACTT-C-C-TCGGTACTTAAGTACTATAGTGCCGAAAAAGCCGAGTTCACAGAGTTTCC 596
|||| | | |||| || ||| | || |||| | ||||| |||||||| ||||||||
Sbjct 519 CACTTCCACAACGGTTCTCAAGCATTACGGTGCTGTCAAAGCAGAGTTCACTGAGTTTCC 578
Query 597 AAATGTTTACATGCTGATGCAATGCACACCCGACATAACTTCCCAAGATTGCAAAACATG 656
||||||||| ||| |||||||||||||||| ||||||||||| | ||||| | |||
Sbjct 579 AAATGTTTATATGATGATGCAATGCACACCGGACATAACTTCAGGCGCGTGCAAGAGATG 638
Query 657 TCTGGGAGAATGCGTGACGCT-TTTCAAAGAACAG-GTTTGGGGAAGACAAGGAGGCGAG 714
| || ||| | ||| ||| | ||| | ||| ||| | |||||| ||||||||||||| |
Sbjct 639 TTTGCAAGAGTCCGTTACG-TATTTTAGAGACCAGAG-TTGGGGCAGACAAGGAGGCG-G 695
Query 715 G-TTTATCGTCCGAGCTGTTTTTTCAGGTGGGATCTATATG-CTTTCCATGGTGCTTTTG 772
| ||| ||| ||||||||| ||||| | |||||||| |||| |||| | ||||||||||
Sbjct 696 GATTTGTCGACCGAGCTGTGTTTTCCGCTGGGATCTTTATGCCTTT-TACGGTGCTTTTG 754
Query 773 ATAATGTAACAAGAGTTCCTGCGCCTCCTCGACCTCAAGCTCAGGGA-AACGAGAGCTCT 831
||||||||||||| |||||||| ||| |||| |||| || | ||| |
Sbjct 755 CTAATGTAACAAGAATTCCTGCG---CCT---CCTCGAGCT--TTGATTCCTCGAG--C- 803
Query 832 ATAACAAAAAAGAAAGGAAGAAGCATTGGATATGGTGGAATTATTGCAATAGTTGTGGTT 891
| || || | | || || || | || |||||||| || ||| ||||||||
Sbjct 804 AGAA-GCAATCTCCA-TCACTCGC-TT-GA-AAGGAGGAATTATCGCGATATTTGTGGTT 858
Query 892 CTTACT-TTCATTAATATTTTGGTGTTTATTGGCTAT-ATCAAAGTC-TATGGACGTAGG 948
| || | |||||||| || | |||||||| || | | |||| || | ||| | || ||
Sbjct 859 CCTA-TCGTCATTAATCTTCTCGTGTTTATCGG-TCTGATCAGAG-CTTAT--A-GTCGG 912
Query 949 A-AAGAATCATAC-AACAAAATCAATGTTGGAAGTGCAG-AGTACTCTGATTCTGATGGT 1005
| ||||| || | ||| ||| | | ||| || || || || | | | |||||| ||||
Sbjct 913 ATAAGAA-AAT-CGAAC-AAA-C-A-GTT-CAA-TG-AGCAGCAATATAATTCTGGTGGT 963
Query 1006 CAATTC-ATGTTACGGTTTGATCTTGGTATGGT-CTTAGCGGCTACCGATGAATTCTCAT 1063
||| || | | ||||||| ||| || ||||| | || | | || || || || |||||||
Sbjct 964 CAA-TCTACGCTACGGTTCGATTTTAGTATGATCCTAATC-GCAACGGACGATTTCTCAT 1021
Query 1064 CGGAAAATACGCTTGGCCAAGGTGGATTTGGTA-CGGTCTATAAGGGGACATTA-CTAAA 1121
||||||| | ||||||||||||||||||| | | ||||| ||||||| |||| | |
Sbjct 1022 TTGAAAATAAGATTGGCCAAGGTGGATTTGG-ATCTGTCTACAAGGGGAAATTACCGGGA 1080
Query 1122 CGGGCAAGAGGTAGCGGTGAAGAGGTTAACAAAAGGTTCAGGACAAGGAGATATAGAGTT 1181
||||||| | ||||||| ||||| ||||||| ||| |||||||||||||| ||||||||
Sbjct 1081 -GGGCAAGTGATAGCGGTAAAGAGATTAACAAGAGGCTCAGGACAAGGAGAAATAGAGTT 1139
Query 1182 CAAG-AATGAGGT-TTCGCTATTGACAAGACTCCAGCATAGGAATCTAGTTAAGCTTCTT 1239
|| || ||||| || || |||||||||||||||||||||||||||||||||||||||
Sbjct 1140 -TAGAAACGAGGTCTT-ACTCTTGACAAGACTCCAGCATAGGAATCTAGTTAAGCTTCTT 1197
Query 1240 GGATTTTGTAATGAAGGAGATGAACAGATTCTTGTTTACGAGTTCGTTCCCAATTCAAGT 1299
|||||||||||||||||||||||| || |||||||||||||||| || |||||||| ||
Sbjct 1198 GGATTTTGTAATGAAGGAGATGAAGAGGTTCTTGTTTACGAGTTTGTCCCCAATTCTAGC 1257
Query 1300 CTTGATCACTTTATCTTCGATGATGAGAAGCGTTCACTTCTTACATGGGAGATGAGATAC 1359
|| || ||||| || || ||||| |||||||||| || || || ||||| ||||| | |
Sbjct 1258 CTCGACCACTTCATATTTGATGAAGAGAAGCGTTTGCTACTAACGTGGGACATGAGGTCC 1317
Query 1360 AGAATTATAGAAGGCATTGCTCGAGGTCTTCTTTATCTT-CATGAAGACTCGCAGCTAAA 1418
||||||||||||||| |||| ||||||||| ||||| || || ||||| || |||||||
Sbjct 1318 AGAATTATAGAAGGCGTTGCGCGAGGTCTTGTTTAT-TTACACGAAGATTCTCAGCTAAG 1376
Query 1419 GATTATTCACCGAGACTTGAAGGCAAGCAACATACTTTTAGACGCAGAGATGAACCCTAA 1478
|||||||||||||||||||||||||||||| || |||||||| ||| | |||||||||||
Sbjct 1377 GATTATTCACCGAGACTTGAAGGCAAGCAATATCCTTTTAGATGCATATATGAACCCTAA 1436
Query 1479 AGTTGCAGA-TTTCGGGACAGCGAGGTTGTTCGAC-TCCGATGAGACTCGAGCTGAAACA 1536
||||||||| ||| |||| |||||||||||| || | || ||||| |||| | |||
Sbjct 1437 AGTTGCAGACTTT-GGGATGGCGAGGTTGTTCAACATG-GACCAGACTAGAGCAGTGACA 1494
Query 1537 AAAAGAA-TAGCTGGAACCCGTGGATATATGGCTCCTGAATAC-TT-G-AATCATGGACA 1592
| || || ||| ||||||| ||| |||||||||||||| ||| || | || || | |||
Sbjct 1495 AGAA-AAGTAGTTGGAACCTTTGGCTATATGGCTCCTGAGTACGTTAGGAA-CA-GAACA 1551
Query 1593 AATCTCAG-CTAA-ATCTGACGTTTATAGCTTCGGTGTTATGCTTCTAGAGATGATTAGT 1650
| |||| | || | | ||||| || || ||||| || ||||||| |||||||| | |
Sbjct 1552 TTT-TCAGTC-AAGA-CAGACGTATACAGTTTCGGAGTCGTGCTTCTCGAGATGATAACT 1608
Query 1651 GGT-GAAAGAAACAATAGCT-T--CGAAGGAGAAGGACTTGCAGCTTTTGCATGGAAAAG 1706
||| ||| | ||||| | || | ||||| ||| || | || | ||||||||| |
Sbjct 1609 GGTCGAA-GTAACAAGAACTATTTCGAAGCCCTAGGGCTCCCTGCATATGCATGGAAGTG 1667
Query 1707 ATGGGTTGAAGGAAAGCCTGAGATTATAATTGATCC-GTTCTTAATAGAGAAACC-AAGA 1764
||||||| || || | | || || || |||| || || | ||| || || ||||
Sbjct 1668 TTGGGTTGCGGGCGAGGCAGCGAGCATCATCGATCATGTACTCAGTAG-GAG-CCGAAGA 1725
Query 1765 AATGAGATCATAA-AGTTGATCCAAATTGGTTTGTTGTGTGTTCAAGAGAATCCAACAAA 1823
|| || ||||| | | || ||||| ||||||||||||||||||||||||||| ||||
Sbjct 1726 AACGAAATCATGAGA-TTCATCCACATTGGTTTGTTGTGTGTTCAAGAGAATGTTGCAAA 1784
Query 1824 GAGACCAACAATGAGCTCTG-TAAT--AATTTGGCTTGGTAGTGAGACAAAT-ATCATTC 1879
|||||||| ||||| | || | || ||| ||||||| |||||||| | | | |||||
Sbjct 1785 AAGACCAACCATGAGTT-TGGTTATTCAAT--GGCTTGGAAGTGAGACTA-TCACCATTC 1840
Query 1880 CTTTACCTAAAGCTCCTGCTTTCAC 1904
||||||||| |||| ||| ||||||
Sbjct 1841 CTTTACCTACAGCTGCTGGTTTCAC 1865
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 74428338730
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5