BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G05110.1 Length=1424 Score E Sequences producing significant alignments: (Bits) Value Ahg490161 jgi|Araly1|490161|fgenesh2_kg.6__3295__AT4G05110.1 2028 0.0 Ahg943294 jgi|Araly1|943294|scaffold_603838.1 1866 0.0 Ahg943295 jgi|Araly1|943295|scaffold_603839.1 1404 0.0 > Ahg490161 jgi|Araly1|490161|fgenesh2_kg.6__3295__AT4G05110.1 Length=1368 Score = 2028 bits (1098), Expect = 0.0 Identities = 1282/1372 (93%), Gaps = 7/1372 (1%) Strand=Plus/Plus Query 1 GCATGTGCTAAGTTCCAAGGTTATGTTCTTTTGATCTCTCTGTAACAATTTCGAAAATGG 60 |||||||||||||||||| ||| ||||| ||||| ||||||||||||||||| ||||||| Sbjct 1 GCATGTGCTAAGTTCCAATGTTCTGTTCATTTGAGCTCTCTGTAACAATTTCTAAAATGG 60 Query 61 CGGATATATACGAGCACCAAGTTCCTGAGAAGCTTC-GCGGGAAGTATCAAGCAATGATT 119 |||||||||||| ||||||| |||||||||||||| | |||||||||||||||||| || Sbjct 61 CGGATATATACGGGCACCAAACTCCTGAGAAGCTTCAG-GGGAAGTATCAAGCAATGGTT 119 Query 120 GTCTACTGTATTCTTGGATTTGGTTCTCTTATTTCTTGGAACAGTATGCTCACTACAGCA 179 || ||||||||||||||| |||| ||||| ||||||||||||||||||| | || |||| Sbjct 120 GTTTACTGTATTCTTGGAATTGGATCTCTCGTTTCTTGGAACAGTATGCTTAGTATAGCA 179 Query 180 GATTACTACTACAAAGTTTTCCCGGATTATCATCCTTCAAGAGTACTCACACTTGTATAC 239 |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 180 GATTACTACTACCAAGTTTTCCCGGATTATCATCCTTCAAGGGTACTCACACTTGTATAC 239 Query 240 CAACCGTTTGCGTTTGGAGCAATCGTGATCCTCGCATACCACGAATCGAAAACCAGTACT 299 |||||||||||| ||||| |||||||||| |||||||||||||||||||||| || |||| Sbjct 240 CAACCGTTTGCGCTTGGAACAATCGTGATTCTCGCATACCACGAATCGAAAATCAATACT 299 Query 300 CGAAAACGTAACCTGATTGGTTACATTCTATACACAATATCCACATTCTTGCTCATAGTT 359 || |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct 300 CGGAAACGTAACCTGATCGGTTACATTCTATACACAATATCCACATTCTCACTCATAGTT 359 Query 360 TTGGATTTGGCAACAAAAGGACGTGGTGGATTCGGACCTTATACCGGTTTATGCGCAGTC 419 ||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct 360 TTGGATTCGGCAACAAAAGGACGTGGTGGAATCGGACCTTATATTGGTTTATGCGCAGTC 419 Query 420 GTTGCTGCTTTTGGCCTCGCGGATGCTACCGTTCAAGGAGGAATGTTCGGTGATTTATCA 479 |||||| |||| ||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct 420 GTTGCTTCTTTCGGCCTCGCGGATGCTACCGTTCAAGGAGGAATGATAGGTGATTTATCA 479 Query 480 CTGATGTGCCCTGAACTAGTTCAGTCATACATGGGAGGTATGGCTGTAGCTGGTGCGCTA 539 ||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||| Sbjct 480 TTGATGTGCCCTGAACTAGTTCAGTCATTCATGGGAGGTTTAGCTGTAGCTGGTGCGCTA 539 Query 540 ACATCAGCGCTTAGGCTAATAACCAAAGCAGCTTTTGAGAAATCAAACAATGGTCTACGA 599 |||||||| |||||||||||||| |||||||||||||||||| ||||||| |||||||| Sbjct 540 ACATCAGCACTTAGGCTAATAACTAAAGCAGCTTTTGAGAAAACAAACAACGGTCTACGT 599 Query 600 AAAGGGGCAATGATGTTCTTAGCTATCTCCACATGCATAGAGTTACTATCTGTGATGCTA 659 ||||| |||||||||||||||||||||||||||| |||||| ||||| | |||||||||| Sbjct 600 AAAGGAGCAATGATGTTCTTAGCTATCTCCACATTCATAGATTTACTCTGTGTGATGCTA 659 Query 660 TATGCTTATGTGTTACCGAAACTCCCGATTGTTATGTATTACCGAAGAAAAGCCGCTTCT 719 || | |||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 660 TACACGTATGTGTTACCGAAACTCCCGATTGTTAAGTATTACCGAAGAAAAGCCGCTTCT 719 Query 720 CAAGGATCCAAAACTGTTTCTGCTGATCTTGCTGCTGCGGGTATCCAAAATCAATCAGAC 779 |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| | Sbjct 720 GAAGGATCCAAAACTGTTTCTGCTGATCTTGCTGCCGCTGGTATCCAAAATCAATCAGGC 779 Query 780 TTGAGTGATGATGATTCCAAGAATCAAAGGCTAAGCAAAAAAGAGCTGTTGTTTCAAAAC 839 |||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||| Sbjct 780 TTGACTGATGATGATTCCAAGAATCAAAGGCTAAGCAAAAAGGAGCTGTTGATTCAAAAC 839 Query 840 ATAGACCATGCAGTAAATTTATTCCTCATCTACGTTTGTACATTATCCATTTTTCCC-GG 898 |||||| ||||||| |||||||||||||||||||||||||||||||| | ||||||| || Sbjct 840 ATAGACTATGCAGTGAATTTATTCCTCATCTACGTTTGTACATTATCTA-TTTTCCCGGG 898 Query 899 GTTCTTGTATGAAAACACAGGACAACACGGGCTAGGTGCTTGGTACGCACTTGTCTTAGT 958 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct 899 GTTCTTGTATGAAAACACAGGACAACACGGGCTAGGCGCTTGGTATGCACTTGTCTTAGT 958 Query 959 AGCGATGTACAA-TTGTTGGGATTTGGTCGGGAGGTACACACCACTGGTTAAATGGCTCA 1017 ||| |||||||| || |||||||||||||||||||||||| || ||||| |||||||||| Sbjct 959 AGCTATGTACAACTT-TTGGGATTTGGTCGGGAGGTACACGCCGCTGGTGAAATGGCTCA 1017 Query 1018 ATATTGAGAATAGAAAATTGATCACAATTGCGGTTTTGTCACGTTATCTCCTCATTCCGG 1077 | ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct 1018 AGATTGAGAATAGAAAATTAATCACAAGTGCGGTTTTGTCACGTTATCTCCTCATTCCGG 1077 Query 1078 CGTTCTACTTCACTGCGAAATATGGTGATCAAGGATGGATGATTATGCTCGTTTCTGTTT 1137 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| | || Sbjct 1078 CGTTCTACTTCACTGCAAAATATGGTGATCAAGGATGGATGATTATGCTCGTTTCCGCTT 1137 Query 1138 TGGGATTGACTAATGGACATCTCACTGTTTGCATTATGACTATAGCTCCTAAAGGATACA 1197 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1138 TGGGATTAACTAATGGACATCTCACTGTTTGCATTATGACTATAGCTCCTAAAGGATACA 1197 Query 1198 AGGGTCCGGAGCAGAATGCGTTAGGGAACTTGCTGGTGATATTTCTGTTAGGAGGGATAT 1257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1198 AGGGTCCGGAGCAGAATGCGTTAGGGAACTTGCTGGTGATATTTCTGTTAGGAGGGATAT 1257 Query 1258 TTGCAGGAGTTGCTTTGGATTGGTTATGGCTTATTGGTAAGAAGAATGCCTTTTGAGTTT 1317 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1258 TTGCGGGAGTTGCTTTGGATTGGTTATGGCTTATTGGTAAGAAGAATGCCTTTTGAGTTC 1317 Query 1318 TAATCACTCCAAAACCAGTGTTTCACTTTAAGTTAAATTGGAGGTTAATTTG 1369 |||||||||||||||||||| || ||||| |||| |||||||||||||||| Sbjct 1318 TAATCACTCCAAAACCAGTGGCTCGCTTTA-GTTACATTGGAGGTTAATTTG 1368 > Ahg943294 jgi|Araly1|943294|scaffold_603838.1 Length=1298 Score = 1866 bits (1010), Expect = 0.0 Identities = 1207/1303 (93%), Gaps = 10/1303 (1%) Strand=Plus/Plus Query 36 CTCTCTGTAACAATTTCGAAAATGGCGGATATATACGAGCACCAAGTTCCTGAGAAGCTT 95 |||||| |||||||||||||||||||||||| ||||||| |||||| |||||||||||| Sbjct 1 CTCTCTATAACAATTTCGAAAATGGCGGATAGATACGAGAACCAAGCTCCTGAGAAGCTC 60 Query 96 C-GCGGGAAGTATCAAGCAATGATTGTCTACTGTATTCTT-GGATTTGGTTCTCTTATTT 153 | | |||||||| ||||||||| |||| | |||||||||| ||| |||| ||||| ||| Sbjct 61 CAG-GGGAAGTACCAAGCAATGGTTGTTTGCTGTATTCTTGGGA-TTGGATCTCTCGTTT 118 Query 154 CTTGGAACAGTATGCTCACTACAGCAGATTACTACTACAAAGTTTTCCCGGATTATCATC 213 |||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||| Sbjct 119 CTTGGAACAGTATGCTTACTATAGCAGATCACTACTACAAAGTTTTCCCGGATTATCATC 178 Query 214 CTTCAAGAGTACTCACACTTGTATACCAACCGTTTGCGTTTGGAGCAATCGTGATCCTCG 273 ||||||| ||||| |||||||||||||||||||||||| ||||| | |||||||| |||| Sbjct 179 CTTCAAGGGTACTTACACTTGTATACCAACCGTTTGCGCTTGGAACTATCGTGATTCTCG 238 Query 274 CATACCACGAATCGAAAACCAGTACTCGAAAACGTAACCTGATTGGTTACATTCTATACA 333 |||||||||||||||||| || ||| ||||||||||||||||||||||||||||||| || Sbjct 239 CATACCACGAATCGAAAATCAATACCCGAAAACGTAACCTGATTGGTTACATTCTATTCA 298 Query 334 CAATATCCACATTCTTGCTCATAGTTTTGGATTTGGCAACAAAAGGACGTGGTGGATTCG 393 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 299 CGATATCCACATTCTTGCTCATAGTTTTGGATTTGGCAACAAAAGGACGTGGTGGAATCG 358 Query 394 GACCTTATACCGGTTTATGCGCAGTCGTTGCTGCTTTTGGCCTCGCGGATGCTACCGTTC 453 ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 359 GACCTTATATTGGTTTATGCGCAGTCGTTGCTTCTTTTGGCCTCGCGGATGCTACCGTTC 418 Query 454 AAGGAGGAATGTTCGGTGATTTATCACTGATGTGCCCTGAACTAGTTCAGTCATACATGG 513 ||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct 419 AAGGAGGAATGATCGGTGATTTATCATTGATGTGCCCTGAACTAGTTCAGTCATTCATGG 478 Query 514 GAGGTA-TGGCTGTAGCTGGTGCGCTAACATCAGCGCTTAGGCTAATAACCAAAGCAGCT 572 |||| | |||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct 479 GAGG-ATTGGCTGTAGCTGGTGCGCTAACATCAGCACTTAGGCTAATAACGAAAGCAGCT 537 Query 573 TTTGAGAAATCAAACAATGGTCTACGAAAAGGGGCAATGATGTTCTTAGCTATCTCCACA 632 ||||||||| |||| | ||| |||||||||| ||||||||||||||||||||||||||| Sbjct 538 TTTGAGAAAAAAAACGACGGTTTACGAAAAGGAGCAATGATGTTCTTAGCTATCTCCACA 597 Query 633 TGCATAGAGTTACTAT-CTGTGATGCTATATGCTTATGTGTTACCGAAACTCCCGATTGT 691 | |||||| || || | | |||||| |||||||||||||||| || |||||||| ||||| Sbjct 598 TTCATAGAATTCCTCTGC-GTGATGGTATATGCTTATGTGTTCCCAAAACTCCCAATTGT 656 Query 692 TATGTATTACCGAAGAAAAGCCGCTTCTCAAGGATCCAAAACTGTTTCTGCTGATCTTGC 751 || |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct 657 TAAGTATTACCGAAGAAAAGCTGCTTCTGAAGGATCCAAAACTGTTTCTGCTGATCTTGC 716 Query 752 TGCTGCGGGTATCCAAAATCAATCAGACTTGAGTGATGATGATTCCAAGAATCAAAGGCT 811 |||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct 717 TGCTGCTGGTATCCAGAATCAATCAGACTTGACTGATGATGATTCCAAGAATCAAAGGCT 776 Query 812 AAGCAAAAAAGAGCTGTTGTTTCAAAACATAGACCATGCAGTAAATTTATTCCTCATCTA 871 |||||| |||||| ||||| | |||||||||||| ||||||| ||||||||||||||||| Sbjct 777 AAGCAACAAAGAGTTGTTGATACAAAACATAGACTATGCAGTGAATTTATTCCTCATCTA 836 Query 872 CGTTTGTACATTATCCATTTTTCCCGGGTTCTTGTATGAAAACACAGGACAACACGGGCT 931 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 837 CGTTTGTACATTATCCATTTTCCCCGGGTTCTTGTATGAAAATACAGGACAACACGGGCT 896 Query 932 AGGTGCTTGGTACGCACTTGTCTTAGTAGCGATGTACAATTGTTGGGATTTGGTCGGGAG 991 || |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 897 GGGCGCTTGGTACGCACTTGTCTTAGTAGCGATGTACAATTGCTGGGATTTGGTAGGGAG 956 Query 992 GTACACACCA-CTGGTTAAATGGCTCAATATTGAGAATAGAAAATTGATCACAATTGCGG 1050 |||||| || ||||| ||||||||||| ||||||||||||||| ||||||||||||| | Sbjct 957 GTACAC-GCAGCTGGTGAAATGGCTCAAGATTGAGAATAGAAAACTGATCACAATTGCAG 1015 Query 1051 TTTTGTCACGTTATCTCCTCATTCCGGCGTTCTACTTCACTGCGAAATATGGTGATCAAG 1110 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1016 TTTTATCACGTTATCTCCTCATTCCGGCGTTCTACTTCACTGCGAAATATGGTGATCAAG 1075 Query 1111 GATGGATGATTATGCTCGTTTCTGTTTTGGGATTGACTAATGGACATCTCACTGTTTGCA 1170 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||| Sbjct 1076 GATGGATGATTATGCTTGTTTCTATTTTGGGATTGACTAATGGACATCTCACTGTGTGCA 1135 Query 1171 TTATGACTATAGCTCCTAAAGGATACAAGGGTCCGGAGCAGAATGCGTTAGGGAACTTGC 1230 || | || | ||||||||| || || |||||||||||||||||||||||||||||||||| Sbjct 1136 TTCTCACCACAGCTCCTAATGGCTATAAGGGTCCGGAGCAGAATGCGTTAGGGAACTTGC 1195 Query 1231 TGGTGATATTTCTGTTAGGAGGGATATTTGCAGGAGTTGCTTTGGATTGGTTATGGCTTA 1290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1196 TGGTGATATTTCTGTTAGGAGGGATATTTGCAGGAGTTGCTTTGGATTGGTTATGGCTTA 1255 Query 1291 TTGGTAAGAAGAATGCCTTTTGAGTTTTAATCACTCCAAAACC 1333 ||||||||||||||||||| |||||| ||||||||| |||||| Sbjct 1256 TTGGTAAGAAGAATGCCTTCTGAGTTCTAATCACTCTAAAACC 1298 > Ahg943295 jgi|Araly1|943295|scaffold_603839.1 Length=1298 Score = 1404 bits (760), Expect = 0.0 Identities = 1110/1280 (87%), Gaps = 20/1280 (2%) Strand=Plus/Plus Query 54 AAAATGGCGGATATATACGAGCACCAAGTTCCTGAGAAGCTTCG-CGGGAAGTATCAAGC 112 |||||||| ||| ||||||| |||||| || ||| || ||| | |||||||||||||| Sbjct 18 AAAATGGCTGATGGATACGAGAACCAAGCTCTTGAAAATCTT-GAGGGGAAGTATCAAGC 76 Query 113 AATGATTGTCTACTGTATTCTTGGATTTGGTTCTCTTATTTCTTGGAACAGTATGCTCAC 172 |||| |||| | |||||||||||| | || ||||| |||||||||||||||||||||| Sbjct 77 AATGGTTGTTTGTTGTATTCTTGGAATCGGATCTCTCGTTTCTTGGAACAGTATGCTCAC 136 Query 173 TA-CAGCAGATTACTACTACAAAGTTTTCCCGGATTATCATCCTTCAAGAGTACTCACAC 231 || | ||||||||||||||| |||||||||||||||||||||||||||| |||||||||| Sbjct 137 TATC-GCAGATTACTACTACCAAGTTTTCCCGGATTATCATCCTTCAAGGGTACTCACAC 195 Query 232 TTGTATACCAACCGTTTGCGTTTGGAGCAATCGTGATCCTCGCATACCACGAATCGAAAA 291 ||||||||||||| | ||| ||||| ||||| |||| |||||||||||||||||||||| Sbjct 196 TTGTATACCAACCAATCGCGCTTGGAACAATCATGATTCTCGCATACCACGAATCGAAAA 255 Query 292 CCAGTACTCGAAAACGTAACCTGATTGGTTACATTCTATACACAATATCCACATTCTTGC 351 ||||||||||||||| | ||||| |||||||| |||| |||||||||||||||||||| Sbjct 256 TCAGTACTCGAAAACGCATCCTGACCGGTTACATCCTATTCACAATATCCACATTCTTGC 315 Query 352 TCATAGTTTTGGATTTGGCAACAAAAGGACGTGGTGGATTCGGACCTTATACCGGTTTAT 411 ||||||| ||||||||| |||||||||||| |||||| |||||| ||||| | ||||| Sbjct 316 TCATAGTCTTGGATTTGACAACAAAAGGACACGGTGGAATCGGACATTATATTGTTTTAT 375 Query 412 GCGCAGTCGTTGCTGCTTTTGGCCTCGCGGATGCTACCGTTCAAGGAGGAATGTTCGGTG 471 || || | |||||| |||||||||||||||||||||||||| |||||||| || |||||| Sbjct 376 GCACAATTGTTGCTTCTTTTGGCCTCGCGGATGCTACCGTTAAAGGAGGATTGGTCGGTG 435 Query 472 ATTTATCACTGATGTGCCCTGAAC-TAGTTCAGTCATACATGGGAGGTAT-GGCTGTAGC 529 ||||||| ||||||||||||||| || | |||||||| || | ||| | || | | || Sbjct 436 ATTTATCTTTGATGTGCCCTGAACTTA-TCCAGTCATATATAGCTGGT-TCGGGTATGGC 493 Query 530 TGGTGCGCTAACATCAGCGCTTAGGCTAATAACCAAAGCAGCTTTTGAGAAATCAAACAA 589 |||||| ||||| |||| |||||| |||||||| ||||| || ||||||||||||||||| Sbjct 494 TGGTGCTCTAACCTCAGTGCTTAGACTAATAACGAAAGCTGCCTTTGAGAAATCAAACAA 553 Query 590 TGGTCTACGAAAAGGGGCAATGATGTTCTTAGCTATCTCCACATGCATAGAGTTACTAT- 648 ||| |||||||||| ||||||||||||||||||||||| |||| |||||| || || | Sbjct 554 CGGTTTACGAAAAGGAGCAATGATGTTCTTAGCTATCTCAACATTCATAGAATTCCTCTG 613 Query 649 CTGTGATGCTATATGCTTATGTGTTACCGAAACTCCCGATTGTTATGTATTACCGAAGAA 708 | |||||| |||||||||||||||| || |||||||| || |||| |||||||||||||| Sbjct 614 C-GTGATGTTATATGCTTATGTGTTCCCAAAACTCCCCATCGTTAAGTATTACCGAAGAA 672 Query 709 AAGCCGCTTCTCAAGGATCCAAAACTGTT-TCTGCTGATCTTGCTGCTGCGGGTATCCAA 767 |||| |||||| ||||||||||||||||| | |||||||||||||||||| ||||||||| Sbjct 673 AAGCGGCTTCTGAAGGATCCAAAACTGTTGT-TGCTGATCTTGCTGCTGCTGGTATCCAA 731 Query 768 AATCAATCAGACTTGAGTGATGATGATTCCAAGAATCAAAGGCTAAGCAAAAAAGAGCTG 827 ||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct 732 AATCAATCAGATTTGAGTGATGATGATTCGAAGAATCAAAGGCTAAGCAAGAAAGAGCTG 791 Query 828 TTGTTTCAAAACATAGACCATGCAGTAAATTTATTCCTCATCTACG-TTTGTACATTATC 886 ||| ||||||| |||||||||||||| ||| ||||||||||||||| |||| |||||||| Sbjct 792 TTGCTTCAAAATATAGACCATGCAGTGAATCTATTCCTCATCTACGTTTTG-ACATTATC 850 Query 887 CATTTTTCCCGGGTTCTTGTATGAAAACACAGGACAACACGGGCTAGGTGCTTGGTACGC 946 ||||||||| || ||||| || |||||||| ||||||||||| ||||| | |||||| || Sbjct 851 CATTTTTCCTGGATTCTTATACGAAAACACTGGACAACACGGACTAGGCGATTGGTATGC 910 Query 947 ACTTGTCTTAGTAGCGATGTACAATTGTTGGGATTTGGTCGGGAGGTACACACCACTGGT 1006 |||| || ||||||||| |||||||| |||||||||||||||||||||| |||||||| | Sbjct 911 ACTTATCCTAGTAGCGACGTACAATTTTTGGGATTTGGTCGGGAGGTACGCACCACTGCT 970 Query 1007 TAAATGGCTCAATATTGAGAATAGAAAATTG-A-TCACAATTGCGGTTTTGTCACGTTAT 1064 || ||| | || |||||||||||||| | | | || || |||||||| || |||||| Sbjct 971 GAATTGGTTGAAGGTTGAGAATAGAAAA--GCACTAACGATAGCGGTTTTATCCCGTTAT 1028 Query 1065 CTCCTCATTCCGGCGTTCTACTTCACTGCGAAATATGGTGATCAAGGATGGATGATTATG 1124 | ||| |||| || |||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 1029 TTTCTCGTTCCCGCATTCTACTTCACTGCAAAATATGGTGATAAAGGATGGATGATTATG 1088 Query 1125 CTCGTTTCTGTTTTGGGATTGACTAATGGACATCTCACTGTTTGCATTATGACTATAGCT 1184 || || ||| |||||||| | |||| |||||||||||||||||||||||||||||||||| Sbjct 1089 CTAGTATCTATTTTGGGAATAACTACTGGACATCTCACTGTTTGCATTATGACTATAGCT 1148 Query 1185 CCTAAAGGATACAAGGGTCCGGAGCAGAATGCGTTAGGGAACTTGCTGGTGATATTTCTG 1244 ||||||||||||| |||||||||| ||||||| |||||||| ||||||||| | ||| | Sbjct 1149 CCTAAAGGATACACGGGTCCGGAGAAGAATGCATTAGGGAATTTGCTGGTGGTTTTTATT 1208 Query 1245 TTAGGAGG-GATATTTGCAGGAGTTGCTTTGGATTGGTTATGGCTTATTGGTAAGAAGAA 1303 |||||||| | | ||| |||| || |||||| |||||||||||||||||| ||||| || Sbjct 1209 TTAGGAGGAGC-AGTTGTAGGAATTTCTTTGGGTTGGTTATGGCTTATTGGCAAGAAAAA 1267 Query 1304 TGCCTTTTGAGTTTTAATCA 1323 ||| || |||||| | |||| Sbjct 1268 TGCATTCTGAGTTATCATCA 1287 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 53250162510 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5