BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G05110.1
Length=1424
Score E
Sequences producing significant alignments: (Bits) Value
Ahg490161 jgi|Araly1|490161|fgenesh2_kg.6__3295__AT4G05110.1 2028 0.0
Ahg943294 jgi|Araly1|943294|scaffold_603838.1 1866 0.0
Ahg943295 jgi|Araly1|943295|scaffold_603839.1 1404 0.0
> Ahg490161 jgi|Araly1|490161|fgenesh2_kg.6__3295__AT4G05110.1
Length=1368
Score = 2028 bits (1098), Expect = 0.0
Identities = 1282/1372 (93%), Gaps = 7/1372 (1%)
Strand=Plus/Plus
Query 1 GCATGTGCTAAGTTCCAAGGTTATGTTCTTTTGATCTCTCTGTAACAATTTCGAAAATGG 60
|||||||||||||||||| ||| ||||| ||||| ||||||||||||||||| |||||||
Sbjct 1 GCATGTGCTAAGTTCCAATGTTCTGTTCATTTGAGCTCTCTGTAACAATTTCTAAAATGG 60
Query 61 CGGATATATACGAGCACCAAGTTCCTGAGAAGCTTC-GCGGGAAGTATCAAGCAATGATT 119
|||||||||||| ||||||| |||||||||||||| | |||||||||||||||||| ||
Sbjct 61 CGGATATATACGGGCACCAAACTCCTGAGAAGCTTCAG-GGGAAGTATCAAGCAATGGTT 119
Query 120 GTCTACTGTATTCTTGGATTTGGTTCTCTTATTTCTTGGAACAGTATGCTCACTACAGCA 179
|| ||||||||||||||| |||| ||||| ||||||||||||||||||| | || ||||
Sbjct 120 GTTTACTGTATTCTTGGAATTGGATCTCTCGTTTCTTGGAACAGTATGCTTAGTATAGCA 179
Query 180 GATTACTACTACAAAGTTTTCCCGGATTATCATCCTTCAAGAGTACTCACACTTGTATAC 239
|||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 180 GATTACTACTACCAAGTTTTCCCGGATTATCATCCTTCAAGGGTACTCACACTTGTATAC 239
Query 240 CAACCGTTTGCGTTTGGAGCAATCGTGATCCTCGCATACCACGAATCGAAAACCAGTACT 299
|||||||||||| ||||| |||||||||| |||||||||||||||||||||| || ||||
Sbjct 240 CAACCGTTTGCGCTTGGAACAATCGTGATTCTCGCATACCACGAATCGAAAATCAATACT 299
Query 300 CGAAAACGTAACCTGATTGGTTACATTCTATACACAATATCCACATTCTTGCTCATAGTT 359
|| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct 300 CGGAAACGTAACCTGATCGGTTACATTCTATACACAATATCCACATTCTCACTCATAGTT 359
Query 360 TTGGATTTGGCAACAAAAGGACGTGGTGGATTCGGACCTTATACCGGTTTATGCGCAGTC 419
||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct 360 TTGGATTCGGCAACAAAAGGACGTGGTGGAATCGGACCTTATATTGGTTTATGCGCAGTC 419
Query 420 GTTGCTGCTTTTGGCCTCGCGGATGCTACCGTTCAAGGAGGAATGTTCGGTGATTTATCA 479
|||||| |||| ||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 420 GTTGCTTCTTTCGGCCTCGCGGATGCTACCGTTCAAGGAGGAATGATAGGTGATTTATCA 479
Query 480 CTGATGTGCCCTGAACTAGTTCAGTCATACATGGGAGGTATGGCTGTAGCTGGTGCGCTA 539
||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||
Sbjct 480 TTGATGTGCCCTGAACTAGTTCAGTCATTCATGGGAGGTTTAGCTGTAGCTGGTGCGCTA 539
Query 540 ACATCAGCGCTTAGGCTAATAACCAAAGCAGCTTTTGAGAAATCAAACAATGGTCTACGA 599
|||||||| |||||||||||||| |||||||||||||||||| ||||||| ||||||||
Sbjct 540 ACATCAGCACTTAGGCTAATAACTAAAGCAGCTTTTGAGAAAACAAACAACGGTCTACGT 599
Query 600 AAAGGGGCAATGATGTTCTTAGCTATCTCCACATGCATAGAGTTACTATCTGTGATGCTA 659
||||| |||||||||||||||||||||||||||| |||||| ||||| | ||||||||||
Sbjct 600 AAAGGAGCAATGATGTTCTTAGCTATCTCCACATTCATAGATTTACTCTGTGTGATGCTA 659
Query 660 TATGCTTATGTGTTACCGAAACTCCCGATTGTTATGTATTACCGAAGAAAAGCCGCTTCT 719
|| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 660 TACACGTATGTGTTACCGAAACTCCCGATTGTTAAGTATTACCGAAGAAAAGCCGCTTCT 719
Query 720 CAAGGATCCAAAACTGTTTCTGCTGATCTTGCTGCTGCGGGTATCCAAAATCAATCAGAC 779
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |
Sbjct 720 GAAGGATCCAAAACTGTTTCTGCTGATCTTGCTGCCGCTGGTATCCAAAATCAATCAGGC 779
Query 780 TTGAGTGATGATGATTCCAAGAATCAAAGGCTAAGCAAAAAAGAGCTGTTGTTTCAAAAC 839
|||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct 780 TTGACTGATGATGATTCCAAGAATCAAAGGCTAAGCAAAAAGGAGCTGTTGATTCAAAAC 839
Query 840 ATAGACCATGCAGTAAATTTATTCCTCATCTACGTTTGTACATTATCCATTTTTCCC-GG 898
|||||| ||||||| |||||||||||||||||||||||||||||||| | ||||||| ||
Sbjct 840 ATAGACTATGCAGTGAATTTATTCCTCATCTACGTTTGTACATTATCTA-TTTTCCCGGG 898
Query 899 GTTCTTGTATGAAAACACAGGACAACACGGGCTAGGTGCTTGGTACGCACTTGTCTTAGT 958
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 899 GTTCTTGTATGAAAACACAGGACAACACGGGCTAGGCGCTTGGTATGCACTTGTCTTAGT 958
Query 959 AGCGATGTACAA-TTGTTGGGATTTGGTCGGGAGGTACACACCACTGGTTAAATGGCTCA 1017
||| |||||||| || |||||||||||||||||||||||| || ||||| ||||||||||
Sbjct 959 AGCTATGTACAACTT-TTGGGATTTGGTCGGGAGGTACACGCCGCTGGTGAAATGGCTCA 1017
Query 1018 ATATTGAGAATAGAAAATTGATCACAATTGCGGTTTTGTCACGTTATCTCCTCATTCCGG 1077
| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct 1018 AGATTGAGAATAGAAAATTAATCACAAGTGCGGTTTTGTCACGTTATCTCCTCATTCCGG 1077
Query 1078 CGTTCTACTTCACTGCGAAATATGGTGATCAAGGATGGATGATTATGCTCGTTTCTGTTT 1137
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||
Sbjct 1078 CGTTCTACTTCACTGCAAAATATGGTGATCAAGGATGGATGATTATGCTCGTTTCCGCTT 1137
Query 1138 TGGGATTGACTAATGGACATCTCACTGTTTGCATTATGACTATAGCTCCTAAAGGATACA 1197
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1138 TGGGATTAACTAATGGACATCTCACTGTTTGCATTATGACTATAGCTCCTAAAGGATACA 1197
Query 1198 AGGGTCCGGAGCAGAATGCGTTAGGGAACTTGCTGGTGATATTTCTGTTAGGAGGGATAT 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1198 AGGGTCCGGAGCAGAATGCGTTAGGGAACTTGCTGGTGATATTTCTGTTAGGAGGGATAT 1257
Query 1258 TTGCAGGAGTTGCTTTGGATTGGTTATGGCTTATTGGTAAGAAGAATGCCTTTTGAGTTT 1317
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 TTGCGGGAGTTGCTTTGGATTGGTTATGGCTTATTGGTAAGAAGAATGCCTTTTGAGTTC 1317
Query 1318 TAATCACTCCAAAACCAGTGTTTCACTTTAAGTTAAATTGGAGGTTAATTTG 1369
|||||||||||||||||||| || ||||| |||| ||||||||||||||||
Sbjct 1318 TAATCACTCCAAAACCAGTGGCTCGCTTTA-GTTACATTGGAGGTTAATTTG 1368
> Ahg943294 jgi|Araly1|943294|scaffold_603838.1
Length=1298
Score = 1866 bits (1010), Expect = 0.0
Identities = 1207/1303 (93%), Gaps = 10/1303 (1%)
Strand=Plus/Plus
Query 36 CTCTCTGTAACAATTTCGAAAATGGCGGATATATACGAGCACCAAGTTCCTGAGAAGCTT 95
|||||| |||||||||||||||||||||||| ||||||| |||||| ||||||||||||
Sbjct 1 CTCTCTATAACAATTTCGAAAATGGCGGATAGATACGAGAACCAAGCTCCTGAGAAGCTC 60
Query 96 C-GCGGGAAGTATCAAGCAATGATTGTCTACTGTATTCTT-GGATTTGGTTCTCTTATTT 153
| | |||||||| ||||||||| |||| | |||||||||| ||| |||| ||||| |||
Sbjct 61 CAG-GGGAAGTACCAAGCAATGGTTGTTTGCTGTATTCTTGGGA-TTGGATCTCTCGTTT 118
Query 154 CTTGGAACAGTATGCTCACTACAGCAGATTACTACTACAAAGTTTTCCCGGATTATCATC 213
|||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||
Sbjct 119 CTTGGAACAGTATGCTTACTATAGCAGATCACTACTACAAAGTTTTCCCGGATTATCATC 178
Query 214 CTTCAAGAGTACTCACACTTGTATACCAACCGTTTGCGTTTGGAGCAATCGTGATCCTCG 273
||||||| ||||| |||||||||||||||||||||||| ||||| | |||||||| ||||
Sbjct 179 CTTCAAGGGTACTTACACTTGTATACCAACCGTTTGCGCTTGGAACTATCGTGATTCTCG 238
Query 274 CATACCACGAATCGAAAACCAGTACTCGAAAACGTAACCTGATTGGTTACATTCTATACA 333
|||||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||
Sbjct 239 CATACCACGAATCGAAAATCAATACCCGAAAACGTAACCTGATTGGTTACATTCTATTCA 298
Query 334 CAATATCCACATTCTTGCTCATAGTTTTGGATTTGGCAACAAAAGGACGTGGTGGATTCG 393
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 299 CGATATCCACATTCTTGCTCATAGTTTTGGATTTGGCAACAAAAGGACGTGGTGGAATCG 358
Query 394 GACCTTATACCGGTTTATGCGCAGTCGTTGCTGCTTTTGGCCTCGCGGATGCTACCGTTC 453
||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 359 GACCTTATATTGGTTTATGCGCAGTCGTTGCTTCTTTTGGCCTCGCGGATGCTACCGTTC 418
Query 454 AAGGAGGAATGTTCGGTGATTTATCACTGATGTGCCCTGAACTAGTTCAGTCATACATGG 513
||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct 419 AAGGAGGAATGATCGGTGATTTATCATTGATGTGCCCTGAACTAGTTCAGTCATTCATGG 478
Query 514 GAGGTA-TGGCTGTAGCTGGTGCGCTAACATCAGCGCTTAGGCTAATAACCAAAGCAGCT 572
|||| | |||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 479 GAGG-ATTGGCTGTAGCTGGTGCGCTAACATCAGCACTTAGGCTAATAACGAAAGCAGCT 537
Query 573 TTTGAGAAATCAAACAATGGTCTACGAAAAGGGGCAATGATGTTCTTAGCTATCTCCACA 632
||||||||| |||| | ||| |||||||||| |||||||||||||||||||||||||||
Sbjct 538 TTTGAGAAAAAAAACGACGGTTTACGAAAAGGAGCAATGATGTTCTTAGCTATCTCCACA 597
Query 633 TGCATAGAGTTACTAT-CTGTGATGCTATATGCTTATGTGTTACCGAAACTCCCGATTGT 691
| |||||| || || | | |||||| |||||||||||||||| || |||||||| |||||
Sbjct 598 TTCATAGAATTCCTCTGC-GTGATGGTATATGCTTATGTGTTCCCAAAACTCCCAATTGT 656
Query 692 TATGTATTACCGAAGAAAAGCCGCTTCTCAAGGATCCAAAACTGTTTCTGCTGATCTTGC 751
|| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct 657 TAAGTATTACCGAAGAAAAGCTGCTTCTGAAGGATCCAAAACTGTTTCTGCTGATCTTGC 716
Query 752 TGCTGCGGGTATCCAAAATCAATCAGACTTGAGTGATGATGATTCCAAGAATCAAAGGCT 811
|||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct 717 TGCTGCTGGTATCCAGAATCAATCAGACTTGACTGATGATGATTCCAAGAATCAAAGGCT 776
Query 812 AAGCAAAAAAGAGCTGTTGTTTCAAAACATAGACCATGCAGTAAATTTATTCCTCATCTA 871
|||||| |||||| ||||| | |||||||||||| ||||||| |||||||||||||||||
Sbjct 777 AAGCAACAAAGAGTTGTTGATACAAAACATAGACTATGCAGTGAATTTATTCCTCATCTA 836
Query 872 CGTTTGTACATTATCCATTTTTCCCGGGTTCTTGTATGAAAACACAGGACAACACGGGCT 931
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 837 CGTTTGTACATTATCCATTTTCCCCGGGTTCTTGTATGAAAATACAGGACAACACGGGCT 896
Query 932 AGGTGCTTGGTACGCACTTGTCTTAGTAGCGATGTACAATTGTTGGGATTTGGTCGGGAG 991
|| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 897 GGGCGCTTGGTACGCACTTGTCTTAGTAGCGATGTACAATTGCTGGGATTTGGTAGGGAG 956
Query 992 GTACACACCA-CTGGTTAAATGGCTCAATATTGAGAATAGAAAATTGATCACAATTGCGG 1050
|||||| || ||||| ||||||||||| ||||||||||||||| ||||||||||||| |
Sbjct 957 GTACAC-GCAGCTGGTGAAATGGCTCAAGATTGAGAATAGAAAACTGATCACAATTGCAG 1015
Query 1051 TTTTGTCACGTTATCTCCTCATTCCGGCGTTCTACTTCACTGCGAAATATGGTGATCAAG 1110
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1016 TTTTATCACGTTATCTCCTCATTCCGGCGTTCTACTTCACTGCGAAATATGGTGATCAAG 1075
Query 1111 GATGGATGATTATGCTCGTTTCTGTTTTGGGATTGACTAATGGACATCTCACTGTTTGCA 1170
|||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||
Sbjct 1076 GATGGATGATTATGCTTGTTTCTATTTTGGGATTGACTAATGGACATCTCACTGTGTGCA 1135
Query 1171 TTATGACTATAGCTCCTAAAGGATACAAGGGTCCGGAGCAGAATGCGTTAGGGAACTTGC 1230
|| | || | ||||||||| || || ||||||||||||||||||||||||||||||||||
Sbjct 1136 TTCTCACCACAGCTCCTAATGGCTATAAGGGTCCGGAGCAGAATGCGTTAGGGAACTTGC 1195
Query 1231 TGGTGATATTTCTGTTAGGAGGGATATTTGCAGGAGTTGCTTTGGATTGGTTATGGCTTA 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1196 TGGTGATATTTCTGTTAGGAGGGATATTTGCAGGAGTTGCTTTGGATTGGTTATGGCTTA 1255
Query 1291 TTGGTAAGAAGAATGCCTTTTGAGTTTTAATCACTCCAAAACC 1333
||||||||||||||||||| |||||| ||||||||| ||||||
Sbjct 1256 TTGGTAAGAAGAATGCCTTCTGAGTTCTAATCACTCTAAAACC 1298
> Ahg943295 jgi|Araly1|943295|scaffold_603839.1
Length=1298
Score = 1404 bits (760), Expect = 0.0
Identities = 1110/1280 (87%), Gaps = 20/1280 (2%)
Strand=Plus/Plus
Query 54 AAAATGGCGGATATATACGAGCACCAAGTTCCTGAGAAGCTTCG-CGGGAAGTATCAAGC 112
|||||||| ||| ||||||| |||||| || ||| || ||| | ||||||||||||||
Sbjct 18 AAAATGGCTGATGGATACGAGAACCAAGCTCTTGAAAATCTT-GAGGGGAAGTATCAAGC 76
Query 113 AATGATTGTCTACTGTATTCTTGGATTTGGTTCTCTTATTTCTTGGAACAGTATGCTCAC 172
|||| |||| | |||||||||||| | || ||||| ||||||||||||||||||||||
Sbjct 77 AATGGTTGTTTGTTGTATTCTTGGAATCGGATCTCTCGTTTCTTGGAACAGTATGCTCAC 136
Query 173 TA-CAGCAGATTACTACTACAAAGTTTTCCCGGATTATCATCCTTCAAGAGTACTCACAC 231
|| | ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct 137 TATC-GCAGATTACTACTACCAAGTTTTCCCGGATTATCATCCTTCAAGGGTACTCACAC 195
Query 232 TTGTATACCAACCGTTTGCGTTTGGAGCAATCGTGATCCTCGCATACCACGAATCGAAAA 291
||||||||||||| | ||| ||||| ||||| |||| ||||||||||||||||||||||
Sbjct 196 TTGTATACCAACCAATCGCGCTTGGAACAATCATGATTCTCGCATACCACGAATCGAAAA 255
Query 292 CCAGTACTCGAAAACGTAACCTGATTGGTTACATTCTATACACAATATCCACATTCTTGC 351
||||||||||||||| | ||||| |||||||| |||| ||||||||||||||||||||
Sbjct 256 TCAGTACTCGAAAACGCATCCTGACCGGTTACATCCTATTCACAATATCCACATTCTTGC 315
Query 352 TCATAGTTTTGGATTTGGCAACAAAAGGACGTGGTGGATTCGGACCTTATACCGGTTTAT 411
||||||| ||||||||| |||||||||||| |||||| |||||| ||||| | |||||
Sbjct 316 TCATAGTCTTGGATTTGACAACAAAAGGACACGGTGGAATCGGACATTATATTGTTTTAT 375
Query 412 GCGCAGTCGTTGCTGCTTTTGGCCTCGCGGATGCTACCGTTCAAGGAGGAATGTTCGGTG 471
|| || | |||||| |||||||||||||||||||||||||| |||||||| || ||||||
Sbjct 376 GCACAATTGTTGCTTCTTTTGGCCTCGCGGATGCTACCGTTAAAGGAGGATTGGTCGGTG 435
Query 472 ATTTATCACTGATGTGCCCTGAAC-TAGTTCAGTCATACATGGGAGGTAT-GGCTGTAGC 529
||||||| ||||||||||||||| || | |||||||| || | ||| | || | | ||
Sbjct 436 ATTTATCTTTGATGTGCCCTGAACTTA-TCCAGTCATATATAGCTGGT-TCGGGTATGGC 493
Query 530 TGGTGCGCTAACATCAGCGCTTAGGCTAATAACCAAAGCAGCTTTTGAGAAATCAAACAA 589
|||||| ||||| |||| |||||| |||||||| ||||| || |||||||||||||||||
Sbjct 494 TGGTGCTCTAACCTCAGTGCTTAGACTAATAACGAAAGCTGCCTTTGAGAAATCAAACAA 553
Query 590 TGGTCTACGAAAAGGGGCAATGATGTTCTTAGCTATCTCCACATGCATAGAGTTACTAT- 648
||| |||||||||| ||||||||||||||||||||||| |||| |||||| || || |
Sbjct 554 CGGTTTACGAAAAGGAGCAATGATGTTCTTAGCTATCTCAACATTCATAGAATTCCTCTG 613
Query 649 CTGTGATGCTATATGCTTATGTGTTACCGAAACTCCCGATTGTTATGTATTACCGAAGAA 708
| |||||| |||||||||||||||| || |||||||| || |||| ||||||||||||||
Sbjct 614 C-GTGATGTTATATGCTTATGTGTTCCCAAAACTCCCCATCGTTAAGTATTACCGAAGAA 672
Query 709 AAGCCGCTTCTCAAGGATCCAAAACTGTT-TCTGCTGATCTTGCTGCTGCGGGTATCCAA 767
|||| |||||| ||||||||||||||||| | |||||||||||||||||| |||||||||
Sbjct 673 AAGCGGCTTCTGAAGGATCCAAAACTGTTGT-TGCTGATCTTGCTGCTGCTGGTATCCAA 731
Query 768 AATCAATCAGACTTGAGTGATGATGATTCCAAGAATCAAAGGCTAAGCAAAAAAGAGCTG 827
||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 732 AATCAATCAGATTTGAGTGATGATGATTCGAAGAATCAAAGGCTAAGCAAGAAAGAGCTG 791
Query 828 TTGTTTCAAAACATAGACCATGCAGTAAATTTATTCCTCATCTACG-TTTGTACATTATC 886
||| ||||||| |||||||||||||| ||| ||||||||||||||| |||| ||||||||
Sbjct 792 TTGCTTCAAAATATAGACCATGCAGTGAATCTATTCCTCATCTACGTTTTG-ACATTATC 850
Query 887 CATTTTTCCCGGGTTCTTGTATGAAAACACAGGACAACACGGGCTAGGTGCTTGGTACGC 946
||||||||| || ||||| || |||||||| ||||||||||| ||||| | |||||| ||
Sbjct 851 CATTTTTCCTGGATTCTTATACGAAAACACTGGACAACACGGACTAGGCGATTGGTATGC 910
Query 947 ACTTGTCTTAGTAGCGATGTACAATTGTTGGGATTTGGTCGGGAGGTACACACCACTGGT 1006
|||| || ||||||||| |||||||| |||||||||||||||||||||| |||||||| |
Sbjct 911 ACTTATCCTAGTAGCGACGTACAATTTTTGGGATTTGGTCGGGAGGTACGCACCACTGCT 970
Query 1007 TAAATGGCTCAATATTGAGAATAGAAAATTG-A-TCACAATTGCGGTTTTGTCACGTTAT 1064
|| ||| | || |||||||||||||| | | | || || |||||||| || ||||||
Sbjct 971 GAATTGGTTGAAGGTTGAGAATAGAAAA--GCACTAACGATAGCGGTTTTATCCCGTTAT 1028
Query 1065 CTCCTCATTCCGGCGTTCTACTTCACTGCGAAATATGGTGATCAAGGATGGATGATTATG 1124
| ||| |||| || |||||||||||||| |||||||||||| |||||||||||||||||
Sbjct 1029 TTTCTCGTTCCCGCATTCTACTTCACTGCAAAATATGGTGATAAAGGATGGATGATTATG 1088
Query 1125 CTCGTTTCTGTTTTGGGATTGACTAATGGACATCTCACTGTTTGCATTATGACTATAGCT 1184
|| || ||| |||||||| | |||| ||||||||||||||||||||||||||||||||||
Sbjct 1089 CTAGTATCTATTTTGGGAATAACTACTGGACATCTCACTGTTTGCATTATGACTATAGCT 1148
Query 1185 CCTAAAGGATACAAGGGTCCGGAGCAGAATGCGTTAGGGAACTTGCTGGTGATATTTCTG 1244
||||||||||||| |||||||||| ||||||| |||||||| ||||||||| | ||| |
Sbjct 1149 CCTAAAGGATACACGGGTCCGGAGAAGAATGCATTAGGGAATTTGCTGGTGGTTTTTATT 1208
Query 1245 TTAGGAGG-GATATTTGCAGGAGTTGCTTTGGATTGGTTATGGCTTATTGGTAAGAAGAA 1303
|||||||| | | ||| |||| || |||||| |||||||||||||||||| ||||| ||
Sbjct 1209 TTAGGAGGAGC-AGTTGTAGGAATTTCTTTGGGTTGGTTATGGCTTATTGGCAAGAAAAA 1267
Query 1304 TGCCTTTTGAGTTTTAATCA 1323
||| || |||||| | ||||
Sbjct 1268 TGCATTCTGAGTTATCATCA 1287
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 53250162510
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5