BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G05470.1
Length=915
Score E
Sequences producing significant alignments: (Bits) Value
Ahg942933 jgi|Araly1|942933|scaffold_603477.1 839 0.0
Ahg352457 jgi|Araly1|352457|fgenesh1_pg.C_scaffold_6003050 839 0.0
Ahg887536 jgi|Araly1|887536|Al_scaffold_0320_1 745 0.0
Ahg895252 jgi|Araly1|895252|Al_scaffold_0006_3248 532 1e-150
Ahg943324 jgi|Araly1|943324|scaffold_603868.1 411 6e-114
Ahg333289 jgi|Araly1|333289|fgenesh1_pm.C_scaffold_320000002 357 8e-98
Ahg943328 jgi|Araly1|943328|scaffold_603872.1 313 2e-84
Ahg943323 jgi|Araly1|943323|scaffold_603867.1 204 1e-51
Ahg949412 jgi|Araly1|949412|scaffold_801299.1 137 1e-31
> Ahg942933 jgi|Araly1|942933|scaffold_603477.1
Length=963
Score = 839 bits (454), Expect = 0.0
Identities = 692/803 (86%), Gaps = 31/803 (4%)
Strand=Plus/Plus
Query 121 AAAGAGCGAA-GAAACTGGGTGGATCTTCCGCCGGAGCTGACGACTTCGATCCTGCTGCG 179
||||||| || |||||||| ||||||||||||||||| ||||||||||||||||||| ||
Sbjct 81 AAAGAGC-AACGAAACTGGTTGGATCTTCCGCCGGAGTTGACGACTTCGATCCTGCTCCG 139
Query 180 TCTTAGCCTGACTGATATACTGGACAACGCTCAGAAGGTGTGTAAAGAGTGGCGACGCAT 239
|||||| |||||||||||||||| ||||||| ||||||||| | | ||||||||||| |
Sbjct 140 ACTTAGCGTGACTGATATACTGGATAACGCTCGGAAGGTGTGCAGACAGTGGCGACGCGT 199
Query 240 TTGTAAAGACCCTTCGATGTGGCGGAAAATCAACACGCGAGACTGCCTCA-TGTA-CAAC 297
|||||||||||||||||||||| |||||||||| |||||||||||| | | || |
Sbjct 200 ATGTAAAGACCCTTCGATGTGGCAGAAAATCAACTTGCGAGACTGCCT-ATTCTATC-GG 257
Query 298 TTTGATTTCGTGAGCATGTGCCGTCACATTGTTGATCTCAGCCAGGGTGGCTTGCTAGAG 357
|| ||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 258 TTCGATTTCGAGGGCATGTGCCGTCACATTGTTGATCTCAGCCAGGGTGGATTGCTAGAG 317
Query 358 ATCAACGTTGATGAACACTTCTTGAGCGATTCTCTCCTCAGCTACATTACCGATAG---- 413
|| ||| | |||||| ||| |||||||||||||||| |||||||| |||||||
Sbjct 318 ATTAAC-AT--TGAACATTTCGTGAGCGATTCTCTCCTGAGCTACATCGCCGATAGATCA 374
Query 414 -G-AATCTGAGAAGTCTTGGACTTGGAATGTGCT-TTCCAAGGGTGACGAAAC-TAGGAG 469
| ||||||| ||||||||||||| ||| | | |||| ||||| ||| |||||
Sbjct 375 AGTAATCTGAAAAGTCTTGGACTTTCAATCT-ATGAACCAA---TGACG-AACAAAGGAG 429
Query 470 TTGTGAACGCAATTGCAAAAATTCCATTGCTTGAAACCCTCGAGGTCACTCACTCAT-GT 528
|| |||||| || |||||| |||||||||||||||||||||||||| |||||||| |
Sbjct 430 TTATGAACGGGATCGCAAAATTTCCATTGCTTGAAACCCTCGAGGTCTTTCACTCATCG- 488
Query 529 ATAAAACTGGATTTAAAAGCTATAGGCCACGCTTGCCCACAGCTAAAGACATTGAAGCTA 588
| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 489 CTTAAACTGGATTTGAAAGCTATAGGCCACGTTTGCCCACAGCTAAAGACATTGAAGCTA 548
Query 589 AACTCCTTAGGCCGCCTATGGCCAGCC-AGTGACAAGTATGACAGCAA-CGTGTTAGACG 646
||||||||| || ||| | |||| ||| | || ||| |||| || || | ||||| ||
Sbjct 549 AACTCCTTATGCTGCCCAGGGCCGGCCCA-TGGCAATTATGCCAT-AAGCCAGTTAGGCG 606
Query 647 ATATGGGGCCTCTCG---AATGTGATGATGATGCTTTAGCAATTGCTGAAAGCATGCCCA 703
| ||| ||||||| ||||||||||||||||| ||||||| ||||||||||||||||
Sbjct 607 ACATGCCCCCTCTCGTCGAATGTGATGATGATGCTCTAGCAATCGCTGAAAGCATGCCCA 666
Query 704 AACTACACCACCTCCAGCTTATGGCTAACAGACTAACCAACACAGGCTTGAATGCCATTC 763
|||||| ||||||||||||||||| ||| |||||||||| ||||||||||||| |||||
Sbjct 667 AACTACGCCACCTCCAGCTTATGGGGAACGGACTAACCAATACAGGCTTGAATGTCATTC 726
Query 764 TCGACGGTTGTCCTCACCTGGAACACCTTGATGTACGCAAGTGTTTCAGGATTAGCCTTG 823
||||| | |||||||||||||||||||||||||||||||||||||||| || | |||||
Sbjct 727 TCGACCGCTGTCCTCACCTGGAACACCTTGATGTACGCAAGTGTTTCAACATGAACCTTG 786
Query 824 TCGGGAATCTTGAGAAGCGATGTTTGGAGATGATCAAAGAGTTGAGACGCCCCGGTGACT 883
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 787 TCGGGAATCTTGAGAAGCGATGTTTGGAGAGGATCAAAGAGTTGAGACGCCCCGGTGACT 846
Query 884 CAACCGCAGATTACCCATATAAT 906
||||||| |||||||||||||||
Sbjct 847 CAACCGCCGATTACCCATATAAT 869
> Ahg352457 jgi|Araly1|352457|fgenesh1_pg.C_scaffold_6003050
Length=918
Score = 839 bits (454), Expect = 0.0
Identities = 692/803 (86%), Gaps = 31/803 (4%)
Strand=Plus/Plus
Query 121 AAAGAGCGAA-GAAACTGGGTGGATCTTCCGCCGGAGCTGACGACTTCGATCCTGCTGCG 179
||||||| || |||||||| ||||||||||||||||| ||||||||||||||||||| ||
Sbjct 58 AAAGAGC-AACGAAACTGGTTGGATCTTCCGCCGGAGTTGACGACTTCGATCCTGCTCCG 116
Query 180 TCTTAGCCTGACTGATATACTGGACAACGCTCAGAAGGTGTGTAAAGAGTGGCGACGCAT 239
|||||| |||||||||||||||| ||||||| ||||||||| | | ||||||||||| |
Sbjct 117 ACTTAGCGTGACTGATATACTGGATAACGCTCGGAAGGTGTGCAGACAGTGGCGACGCGT 176
Query 240 TTGTAAAGACCCTTCGATGTGGCGGAAAATCAACACGCGAGACTGCCTCA-TGTA-CAAC 297
|||||||||||||||||||||| |||||||||| |||||||||||| | | || |
Sbjct 177 ATGTAAAGACCCTTCGATGTGGCAGAAAATCAACTTGCGAGACTGCCT-ATTCTATC-GG 234
Query 298 TTTGATTTCGTGAGCATGTGCCGTCACATTGTTGATCTCAGCCAGGGTGGCTTGCTAGAG 357
|| ||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 235 TTCGATTTCGAGGGCATGTGCCGTCACATTGTTGATCTCAGCCAGGGTGGATTGCTAGAG 294
Query 358 ATCAACGTTGATGAACACTTCTTGAGCGATTCTCTCCTCAGCTACATTACCGATAG---- 413
|| ||| | |||||| ||| |||||||||||||||| |||||||| |||||||
Sbjct 295 ATTAAC-AT--TGAACATTTCGTGAGCGATTCTCTCCTGAGCTACATCGCCGATAGATCA 351
Query 414 -G-AATCTGAGAAGTCTTGGACTTGGAATGTGCT-TTCCAAGGGTGACGAAAC-TAGGAG 469
| ||||||| ||||||||||||| ||| | | |||| ||||| ||| |||||
Sbjct 352 AGTAATCTGAAAAGTCTTGGACTTTCAATCT-ATGAACCAA---TGACG-AACAAAGGAG 406
Query 470 TTGTGAACGCAATTGCAAAAATTCCATTGCTTGAAACCCTCGAGGTCACTCACTCAT-GT 528
|| |||||| || |||||| |||||||||||||||||||||||||| |||||||| |
Sbjct 407 TTATGAACGGGATCGCAAAATTTCCATTGCTTGAAACCCTCGAGGTCTTTCACTCATCG- 465
Query 529 ATAAAACTGGATTTAAAAGCTATAGGCCACGCTTGCCCACAGCTAAAGACATTGAAGCTA 588
| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 466 CTTAAACTGGATTTGAAAGCTATAGGCCACGTTTGCCCACAGCTAAAGACATTGAAGCTA 525
Query 589 AACTCCTTAGGCCGCCTATGGCCAGCC-AGTGACAAGTATGACAGCAA-CGTGTTAGACG 646
||||||||| || ||| | |||| ||| | || ||| |||| || || | ||||| ||
Sbjct 526 AACTCCTTATGCTGCCCAGGGCCGGCCCA-TGGCAATTATGCCAT-AAGCCAGTTAGGCG 583
Query 647 ATATGGGGCCTCTCG---AATGTGATGATGATGCTTTAGCAATTGCTGAAAGCATGCCCA 703
| ||| ||||||| ||||||||||||||||| ||||||| ||||||||||||||||
Sbjct 584 ACATGCCCCCTCTCGTCGAATGTGATGATGATGCTCTAGCAATCGCTGAAAGCATGCCCA 643
Query 704 AACTACACCACCTCCAGCTTATGGCTAACAGACTAACCAACACAGGCTTGAATGCCATTC 763
|||||| ||||||||||||||||| ||| |||||||||| ||||||||||||| |||||
Sbjct 644 AACTACGCCACCTCCAGCTTATGGGGAACGGACTAACCAATACAGGCTTGAATGTCATTC 703
Query 764 TCGACGGTTGTCCTCACCTGGAACACCTTGATGTACGCAAGTGTTTCAGGATTAGCCTTG 823
||||| | |||||||||||||||||||||||||||||||||||||||| || | |||||
Sbjct 704 TCGACCGCTGTCCTCACCTGGAACACCTTGATGTACGCAAGTGTTTCAACATGAACCTTG 763
Query 824 TCGGGAATCTTGAGAAGCGATGTTTGGAGATGATCAAAGAGTTGAGACGCCCCGGTGACT 883
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 764 TCGGGAATCTTGAGAAGCGATGTTTGGAGAGGATCAAAGAGTTGAGACGCCCCGGTGACT 823
Query 884 CAACCGCAGATTACCCATATAAT 906
||||||| |||||||||||||||
Sbjct 824 CAACCGCCGATTACCCATATAAT 846
> Ahg887536 jgi|Araly1|887536|Al_scaffold_0320_1
Length=915
Score = 745 bits (403), Expect = 0.0
Identities = 680/807 (84%), Gaps = 45/807 (6%)
Strand=Plus/Plus
Query 121 AAAGAGCGAA-GAAACTGGGTGGATCTTCCGCCGGAGCTGACGACTTCGATCCTGCTGCG 179
||||||| || |||||||| ||||||||||||||||| |||||||||||||| |||| ||
Sbjct 58 AAAGAGC-AACGAAACTGGTTGGATCTTCCGCCGGAGTTGACGACTTCGATCTTGCTCCG 116
Query 180 TCTTAGCCTGACTGATATACTGGACAACGCTCAGAAGGTGTGTAAAGAGTGGCGACGCAT 239
|||||| |||||||||||||| ||||||||||||||||| | | | ||||||||| |
Sbjct 117 ACTTAGCGTGACTGATATACTGTTTAACGCTCAGAAGGTGTGCAGACAATGGCGACGCGT 176
Query 240 TTGTAAAGACCCTTCGATGTGGCGGAAAATCAACACGCGAGACTGCCTCA-TGTA-CAAC 297
|||||||||||||||||||||| |||||||||| |||||||||||| | | || |
Sbjct 177 CTGTAAAGACCCTTCGATGTGGCAGAAAATCAACTTGCGAGACTGCCT-ATTCTATC-GG 234
Query 298 TTTGATTTCGTGAGCATGTGCCGTCACATTGTTGATCTCAGCCAGGGTGGCTTGCTAGAG 357
|| ||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 235 TTCGATTTCGAGGGCATGTGTCGTCACATTGTTGATCTCAGCCAGGGTGGCTTGCTAGAG 294
Query 358 ATCAACGTTGATGAACACTTCTTGAGCGATTCTCTCCTCAGCTACATTACCGATAG---- 413
|||||| ||| | ||||||| ||||||||||||||||||||||||| |||||||
Sbjct 295 ATCAACATTG--G-ACACTTCGTGAGCGATTCTCTCCTCAGCTACATCGCCGATAGATCA 351
Query 414 -G-AATCTGAGAAGTCTTGGACTTGGAATGTGCTTTCCAAGGGTGACGAAAC-TAGGAGT 470
| ||||||| ||||||||||||| ||| | | ||| ||||| ||| ||||||
Sbjct 352 AGTAATCTGAAAAGTCTTGGACTTTCAATCT-ATGAACAA--ATGACG-AACGAAGGAGT 407
Query 471 TGTGAACGCAATTGCAAAAATTCCATTGCTTGAAACCCTCGAGGTCACT-CACTCAT-GT 528
| |||| | |||||||||| |||||| ||||||||||||| ||||| | || |||| ||
Sbjct 408 TATGAAGGGAATTGCAAAATTTCCATGGCTTGAAACCCTCCAGGTC-TTCCATTCATCGT 466
Query 529 ATAAAACTGGATTTAAAAGCTATAGGCCACGCTTGCCCACAGCTAAAGACATTGAAGCTA 588
| ||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 467 -TTAAACTGGATTTGAAGGCTATAGGCCACGCTTGCCCACATCTAAAGACATTGAAGCTA 525
Query 589 AACTCCTTAGGCCGCCTATGGCCAGCCAGTGACAA-GTATGACAGCAACGT--GTTAGAC 645
|||| || |||| ||| | || | || ||| || ||| | || || ||||||
Sbjct 526 AACTTCTCAGGCTGCCCA-GG---G-CA-TGA-AATTTATCTTA-TAA-GTCAGTTAGA- 575
Query 646 GAT-ATGGGGCCT--C-TCGAATGTGATGATGATGCTTTAGCAATTGCTGAAAGCATGCC 701
| || ||| | ||||||||||||||||||| ||||||| ||||||||||||||
Sbjct 576 TTTCATTCCCCCTCCCGTCGAATGTGATGATGATGCCCTAGCAATCGCTGAAAGCATGCC 635
Query 702 CAAACTACACCACCTCCAGCTTA--TGGCTAACAGACTAACCAACACAGGCTTGAATGCC 759
|||||||| |||||||||||||| ||| ||| |||| |||||||| |||||||||| |
Sbjct 636 CAAACTACGCCACCTCCAGCTTATTTGG--AACGGACTGACCAACACTGGCTTGAATGTC 693
Query 760 ATTCTCGACGGTTGTCCTCACCTGGAACACCTTGATGTACGCAAGTGTTTCAGGATTAGC 819
||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||
Sbjct 694 ATTCTCGACGGTTGTCCTCACCTGGAAGACCTTGATGTGCGCAAGTGTTTCAACATTAAA 753
Query 820 CTTGTCGGGAATCTTGAGAAGCGATGTTTGGAGATGATCAAAGAGTTGAGACGCCCCGGT 879
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 754 CTTGTCGGGAATCTTGAGAAGCGATGTTTGGAGAGGATCAAAGAGTTGAGACGCCCCGGT 813
Query 880 GACTCAACCGCAGATTACCCATATAAT 906
||||||||||| |||||||||||||||
Sbjct 814 GACTCAACCGCCGATTACCCATATAAT 840
Score = 87.9 bits (47), Expect = 1e-16
Identities = 49/50 (98%), Gaps = 0/50 (0%)
Strand=Plus/Plus
Query 19 ATGACATCCTCCACTACGTTGCTGTCGTTGTTCATGAAAGAAGATGAAGA 68
|||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGACAACCTCCACTACGTTGCTGTCGTTGTTCATGAAAGAAGATGAAGA 50
> Ahg895252 jgi|Araly1|895252|Al_scaffold_0006_3248
Length=1452
Score = 532 bits (288), Expect = 1e-150
Identities = 404/459 (88%), Gaps = 11/459 (2%)
Strand=Plus/Plus
Query 455 TGACGAAAC-TAGGAGTTGTGAACGCAATTGCAAAAATTCCATTGCTTGAAACCCTCGAG 513
||||| ||| ||||||| |||||| || |||||| |||||||||||||||||||||||
Sbjct 2 TGACG-AACAAAGGAGTTATGAACGGGATCGCAAAATTTCCATTGCTTGAAACCCTCGAG 60
Query 514 GTCACTCACTCAT-GTATAAAACTGGATTTAAAAGCTATAGGCCACGCTTGCCCACAGCT 572
||| |||||||| | | ||||||||||| |||||||||||||||| ||||||||||||
Sbjct 61 GTCTTTCACTCATCG-CTTAAACTGGATTTGAAAGCTATAGGCCACGTTTGCCCACAGCT 119
Query 573 AAAGACATTGAAGCTAAACTCCTTAGGCCGCCTATGGCCAGCC-AGTGACAAGTATGACA 631
||||||||||||||||||||||||| || ||| | |||| ||| | || ||| |||| ||
Sbjct 120 AAAGACATTGAAGCTAAACTCCTTATGCTGCCCAGGGCCGGCCCA-TGGCAATTATGCCA 178
Query 632 GCAA-CGTGTTAGACGATATGGGGCCTCTCG---AATGTGATGATGATGCTTTAGCAATT 687
|| | ||||| ||| ||| ||||||| ||||||||||||||||| |||||||
Sbjct 179 T-AAGCCAGTTAGGCGACATGCCCCCTCTCGTCGAATGTGATGATGATGCTCTAGCAATC 237
Query 688 GCTGAAAGCATGCCCAAACTACACCACCTCCAGCTTATGGCTAACAGACTAACCAACACA 747
|||||||||||||||||||||| ||||||||||||||||| ||| |||||||||| |||
Sbjct 238 GCTGAAAGCATGCCCAAACTACGCCACCTCCAGCTTATGGGGAACGGACTAACCAATACA 297
Query 748 GGCTTGAATGCCATTCTCGACGGTTGTCCTCACCTGGAACACCTTGATGTACGCAAGTGT 807
|||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 298 GGCTTGAATGTCATTCTCGACCGCTGTCCTCACCTGGAACACCTTGATGTACGCAAGTGT 357
Query 808 TTCAGGATTAGCCTTGTCGGGAATCTTGAGAAGCGATGTTTGGAGATGATCAAAGAGTTG 867
|||| || | ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 358 TTCAACATGAACCTTGTCGGGAATCTTGAGAAGCGATGTTTGGAGAGGATCAAAGAGTTG 417
Query 868 AGACGCCCCGGTGACTCAACCGCAGATTACCCATATAAT 906
||||||||||||||||||||||| |||||||||||||||
Sbjct 418 AGACGCCCCGGTGACTCAACCGCCGATTACCCATATAAT 456
Score = 351 bits (190), Expect = 4e-96
Identities = 401/499 (80%), Gaps = 30/499 (6%)
Strand=Plus/Plus
Query 122 AAGAGCGAAGAAACTGGGTGGATCTTCCGCCGGAGCTGACGACTTCGATCCTGCTGCGTC 181
|||||| ||||||||||| |||||||||| ||||| ||||| ||| ||||||| | ||||
Sbjct 788 AAGAGCCAAGAAACTGGGCGGATCTTCCGTCGGAGTTGACGTCTTTGATCCTGATCCGTC 847
Query 182 TTAGCCTGACTGATATACTGGACAACGCTCAGAAGGTGTGTAAAGAGTGGCGACGCATTT 241
||||| || ||||||| ||| ||||||||||||||||||| | | |||||||||| | |
Sbjct 848 TTAGCGTGGCTGATATTCTGAACAACGCTCAGAAGGTGTGCAGACCGTGGCGACGCGTCT 907
Query 242 GTAAAGACCCTTCGATGTGGCGGAAAATCAACACGCGAGA-CTGCCTCA-TG-TA---CA 295
||||||| ||||||||||||||||||||| ||| | || | ||| ||| | || |
Sbjct 908 GTAAAGAACCTTCGATGTGGCGGAAAATCGACATGAGAAACCTG-ATCAGAGATAGGGGA 966
Query 296 ACT--TTGA---TTTCG-TGAGCATGTGCCGTCACATTGTTGATCTCAGCCAGGGTGGCT 349
| | | || || | | | ||||||||||||| ||||||| |||| ||||||| |
Sbjct 967 A-TGCTCGACCCCTTGGCT-ATCATGTGCCGTCACGCCGTTGATCGCAGCGAGGGTGGTT 1024
Query 350 TGCT-AGAGATCAACGTTGATGAACACTTCTTGAGCGATTCTCTCCTCAG-CTACAT--- 404
|| | | | ||| || ||| | | ||||| | | |||| ||| ||| | ||||||
Sbjct 1025 TGGTCA-AAATCCACCTTG--GGA-ACTTCGTCAACGATGATCTTCTC-GACTACATCGC 1079
Query 405 T-ACCGAT--AGGAATCTGAGAAGTCTTGGACTTGGAATGTGCTTTCCAAGGGTGACGAA 461
| | | | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 TGATAGGTCAAGGAATCTGAGAAGTCTTGGACTTGGAATGTGCTTTCCAAGGGTGACGAG 1139
Query 462 ACTAGGAGTTGTGAACGCAATTGCAAAAATTCCATTGCTTGAAACCCTCGAGGTCACTCA 521
| |||| || |||| ||||| ||||||||||||| |||||||||||||||||| | ||
Sbjct 1140 GCCAGGACTTATGAATGCAATCACAAAAATTCCATTACTTGAAACCCTCGAGGTCTCACA 1199
Query 522 CTCATGTATAAAACTG-GATTTAAAAGCTATAGGCCACGCTTGCCCACAGCTAAAGACAT 580
||||||| |||| ||| | ||| ||| ||||||||||||||||||||||||||||||||
Sbjct 1200 CTCATGTTTAAACCTGAG-TTTGGAAGATATAGGCCACGCTTGCCCACAGCTAAAGACAT 1258
Query 581 TGAAGCTAAACTCCTTAGG 599
||||| ||||||||| |||
Sbjct 1259 TGAAGTTAAACTCCTCAGG 1277
> Ahg943324 jgi|Araly1|943324|scaffold_603868.1
Length=860
Score = 411 bits (222), Expect = 6e-114
Identities = 641/830 (77%), Gaps = 81/830 (10%)
Strand=Plus/Plus
Query 75 AAACAAGAAAACGACAACCTCCACTACGTTGGAGTCGTTG-CTGATGAAAGA-GCGAAGA 132
||| ||||||| || ||||||| |||||| | | | || || | |||| || ||||
Sbjct 45 AAAAAAGAAAAGGAGAACCTCCTCTACGTCGCA---GATGAAAGACG-AAGAGGC-AAGA 99
Query 133 AACTGGGTGGATCTTCCGCCGGAGCTGACG-ACTTCGATCCTGCTGCGTCTTAGCCTG-A 190
||||||| |||||||||| ||||| ||||| | || ||||||| | |||||||| | | |
Sbjct 100 AACTGGGCGGATCTTCCGTCGGAGTTGACGTA-TTTGATCCTGATCCGTCTTAG-CGGAA 157
Query 191 CTGATATACTGGACAACGCTCAGAAGGTGTGTAAAG-AGTGGCGACGCATTTGTAAAGAC 249
|||||||||||||||||||||||||||||| | | |||||||| || | |||||||||
Sbjct 158 TTGATATACTGGACAACGCTCAGAAGGTGTG-CAGGCAGTGGCGATGCGTATGTAAAGAC 216
Query 250 CCTTCGATGTGGCGGAAAATCAACACGCG-AGACTGCCTCATG-TAC---A-ACT--TTG 301
||||||||||||| ||||||| ||| | | || ||| ||| | || | | | | |
Sbjct 217 CCTTCGATGTGGCAGAAAATCGACATGAGAAGCCTG-ATCA-GAAACGAGAGAATGCTCG 274
Query 302 A---TTTCG-TGAGCATGTGCCGTCACATTGTTGATC-TCAGCCAGGGTGGCTTGCTAGA 356
| || | | ||||||||||||||| ||||||| | ||||||||||| ||| | ||
Sbjct 275 ACCGCTTAGCT-AGCATGTGCCGTCACGCCGTTGATCGT-AGCCAGGGTGGTTTGGTCGA 332
Query 357 GA-TCAACGTTGATGAACACTTCTTGAGCGATTCTCTCCTCAG-CTACAT----TACCGA 410
| || |||||| | | |||| || ||| ||||||| | |||||| | ||
Sbjct 333 -ACTCCACGTTG--GGA-GCTTCGCCAGTGATGATCTCCTC-GACTACATCGCAGATAGA 387
Query 411 T--AGGAATCTGAGAAGTCTTGGACTTGGAATGTGCTTTCCAAGGGTGACGAAACTAGGA 468
| ||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||
Sbjct 388 TCAAGGAATCTGAGAAGTCTTGGACTTGGAATGTGCTTTCCAAGGGCGACGAACCCAGGA 447
Query 469 GTTGTGAACGCAATTGCAAAAATTCCATTGCTTGAAACCCTCGAGGTCACTCACTCATGT 528
||||| || |||| ||||| ||| |||||||||||||||||||||| | |||||||||
Sbjct 448 CTTGTGGACACAATCACAAAACTTCTATTGCTTGAAACCCTCGAGGTCTCACACTCATGT 507
Query 529 ATAAAACTGGATTTAAAAGCTATAGGCCACGCTTGCCCACAGCTAAAGACATTGAAGCTA 588
||| |||||||| ||||||||||| || ||||||||||||||||||||||| ||| ||
Sbjct 508 TTAATTCTGGATTTCAAAGCTATAGGTCAGGCTTGCCCACAGCTAAAGACATTCAAGTTA 567
Query 589 AACTCCTTAGGCCGCCTATGGCCAGCCAGTGACAAGTATGACAGCAACGTGTTAGACGAT 648
||||||| ||| || | ||| ||| | | | | ||||| | || | | |
Sbjct 568 AACTCCTCAGGGCGTTTCTGG--AGC---T--C---T----C-GCAAC-T-TTCG-C-A- 607
Query 649 ATGGGGCCTCTCG-AATG-TGATGATGATGCTTTAGCAATTGCTGAAAGCATGCCCA-AA 705
| | ||||| |||| |||| || |||| ||| ||| |||||||||||||| | ||
Sbjct 608 A-----C-TCTCGCAATGATGATTATTATGCCCTAGAAATCGCTGAAAGCATGCC-AGAA 660
Query 706 CTACACCACCTCCAGCTT-ATGGCTAACAGACTAACCAACACAGGCTTGAATGCCATTCT 764
|||| ||||||| | ||| |||| |||| ||||| ||| ||||||||| ||||||||
Sbjct 661 CTACGCCACCTCTACCTTTATGGG-AACAAACTAAGTGACATAGGCTTGAACGCCATTCT 719
Query 765 CGACGGTTGTCCTCACCTGGAACACCTTGATGT-ACGCAAGTGTTTCAGGATTAGCCTTG 823
||||||||||||||||||||||||| || || || |||||||||| | ||| ||||
Sbjct 720 TAACGGTTGTCCTCACCTGGAACACCTCGA-GTTACATAAGTGTTTCAAGCTTAAACTTG 778
Query 824 TCGG-GAATCTTGAGAAGCGATGTT-TGGAGATGATCAAAGAGTTGAGAC 871
|||| || ||| ||||||||||||| || ||| ||||||| | || ||||
Sbjct 779 TCGGAGA-TCTGGAGAAGCGATGTTATG-AGAGGATCAAATATTTTAGAC 826
> Ahg333289 jgi|Araly1|333289|fgenesh1_pm.C_scaffold_320000002
Length=675
Score = 357 bits (193), Expect = 8e-98
Identities = 402/499 (81%), Gaps = 30/499 (6%)
Strand=Plus/Plus
Query 122 AAGAGCGAAGAAACTGGGTGGATCTTCCGCCGGAGCTGACGACTTCGATCCTGCTGCGTC 181
|||||| ||||||||||| |||||||||| ||||| ||||| ||| ||||||| | ||||
Sbjct 11 AAGAGCCAAGAAACTGGGCGGATCTTCCGTCGGAGTTGACGTCTTTGATCCTGATCCGTC 70
Query 182 TTAGCCTGACTGATATACTGGACAACGCTCAGAAGGTGTGTAAAGAGTGGCGACGCATTT 241
||||| || ||||||| ||||||||||||||||||||||| | | |||||||||| | |
Sbjct 71 TTAGCGTGGCTGATATTCTGGACAACGCTCAGAAGGTGTGCAGACCGTGGCGACGCGTCT 130
Query 242 GTAAAGACCCTTCGATGTGGCGGAAAATCAACACGCG-AGACTGCCTCA-TG-TA---CA 295
||||||| ||||||||||||||||||||| ||| | | || ||| ||| | || |
Sbjct 131 GTAAAGAACCTTCGATGTGGCGGAAAATCGACATGAGAAGCCTG-ATCAGAGATAGGGGA 189
Query 296 ACT--TTGA---TTTCG-TGAGCATGTGCCGTCACATTGTTGATCTCAGCCAGGGTGGCT 349
| | | || || | | | ||||||||||||| || |||| |||| ||||||| |
Sbjct 190 A-TGCTCGACCCCTTAGCT-ATCATGTGCCGTCACGCCGTGGATCGCAGCGAGGGTGGTT 247
Query 350 TGCT-AGAGATCAACGTTGATGAACACTTCTTGAGCGATTCTCTCCTCAG-CTACAT--- 404
|| | | | ||| || ||| | | ||||| | | |||| ||| ||| | ||||||
Sbjct 248 TGGTCA-AAATCCACCTTG--GGA-ACTTCGTCAACGATGATCTTCTC-GACTACATCGC 302
Query 405 T-ACCGAT--AGGAATCTGAGAAGTCTTGGACTTGGAATGTGCTTTCCAAGGGTGACGAA 461
| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 303 TGATAGATCAAGGAATCTGAGAAGTCTTGGACTTGGAATGTGCTTTCCAAGGGTGACGAG 362
Query 462 ACTAGGAGTTGTGAACGCAATTGCAAAAATTCCATTGCTTGAAACCCTCGAGGTCACTCA 521
| |||| ||||||| ||||| ||||| ||||||| |||||||||||||||||| | ||
Sbjct 363 GCCAGGACTTGTGAATGCAATCACAAAACTTCCATTACTTGAAACCCTCGAGGTCTCACA 422
Query 522 CTCATGTATAAAACTG-GATTTAAAAGCTATAGGCCACGCTTGCCCACAGCTAAAGACAT 580
||||||| |||| ||| | ||| ||| ||||||||||||||||||||||||||||||||
Sbjct 423 CTCATGTTTAAACCTGAG-TTTGGAAGATATAGGCCACGCTTGCCCACAGCTAAAGACAT 481
Query 581 TGAAGCTAAACTCCTTAGG 599
||||| ||||||||| |||
Sbjct 482 TGAAGTTAAACTCCTCAGG 500
> Ahg943328 jgi|Araly1|943328|scaffold_603872.1
Length=778
Score = 313 bits (169), Expect = 2e-84
Identities = 439/562 (78%), Gaps = 48/562 (9%)
Strand=Plus/Plus
Query 75 AAACAAGAAAACGACAACCTCCACTACGTTGGAGTCGTTG-CTGATGAAAGAGCGAAGAA 133
||| ||||||| || ||||||| ||||| | | || || || | |||||| |||||
Sbjct 41 AAAAAAGAAAATGAGAACCTCCTCTACG-T--CGCCGATGAAAGACG-AAGAGCCAAGAA 96
Query 134 ACTGGGTGGATCTTCCGCCGGAGCTGACGACTTCGATCCTGCTGCGTCTTAGCCTGACTG 193
||||||||||||||||| ||||| ||||| ||| ||||||| | ||||||||| ||||||
Sbjct 97 ACTGGGTGGATCTTCCGTCGGAGTTGACGTCTTTGATCCTGATCCGTCTTAGCGTGACTG 156
Query 194 ATATACTGGACAACGCTCAGAAGGTGTGTAAAGAGTGGCGACGCATTTGTAAAGACCCTT 253
|||| ||||| ||||||| ||||||||| | |||||||||||| |||||||||||||
Sbjct 157 ATATTCTGGAAAACGCTCGGAAGGTGTGCAGCCCGTGGCGACGCATCTGTAAAGACCCTT 216
Query 254 CGATGTGGCGGAAAATCAACACGCGAGACT-G-C---CT-C--A-T---GTACAACTT-- 299
||||||||||||||||| ||| |||||||| | | | | | | || ||| |
Sbjct 217 CGATGTGGCGGAAAATCGACATGCGAGACTTGGCAAACCGCGGAATATTGTTCAAGTACA 276
Query 300 -TG-ATTTCG--TGAGC---ATGTGCCGTCACATTGTTGATCTCAGCCAGGGTGGCTTGC 352
|| | | | || || | ||||||| || |||||||||||||||||| |||||||
Sbjct 277 ATGCAGATAGCATGCGCCGCAGGTGCCGTGACGCTGTTGATCTCAGCCAGGGCGGCTTGC 336
Query 353 TAGAGATCAACGTTGATGAACACTTCTTGAGCGATTCTCTCCTCAGCTACATTACCGATA 412
|||||||||| ||||| | |||| ||||||||||||||||||||||||| ||||||
Sbjct 337 TAGAGATCAAAATTGAT---CGCTTCGTGAGCGATTCTCTCCTCAGCTACATCGCCGATA 393
Query 413 G-----G-AATCTGAGAAGTCTTGGACTTGGAATGTGCTTTCCAAGGG-TGACGAA--AC 463
| | ||||||| |||| ||| |||| | | || || || | | | || || |
Sbjct 394 GATCAAGTAATCTGAAAAGTTTTGCACTTCCAGTCTG-TTACCCATCGATAAC-AACGA- 450
Query 464 TAGGAG---TTGTGAACGCAATTGCAAAAATTCCATTGCTTGAAACCCTCGAGGTCACTC 520
||| || |||| |||||||| || ||| ||||||| ||||||||||||||| || ||
Sbjct 451 TAGAAGAACTTGTTAACGCAATCGCGAAATTTCCATTTCTTGAAACCCTCGAGTTCT-TC 509
Query 521 -ACTCAT-GTATAAAACTGGATTTAAAAGCTATAGGCCACGCTTGCCCACAGCTAAAGAC 578
||| || || || | |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 510 GACTTATTGTTTATA-CTGGATTTGAAAGCTATAGGCCACGCTTGCCCACAGCTAAAGAC 568
Query 579 ATTGAAGCTAAACTCCTTAGGC 600
||||||| |||||| || ||||
Sbjct 569 ATTGAAGATAAACTTCTCAGGC 590
> Ahg943323 jgi|Araly1|943323|scaffold_603867.1
Length=1876
Score = 204 bits (110), Expect = 1e-51
Identities = 198/240 (83%), Gaps = 8/240 (3%)
Strand=Plus/Plus
Query 668 ATGATGATGCTTTAGCAATTGCTGAAAGCATGCCCAAACTACACCACCTCCAGC-TTATG 726
|||| |||||| ||||||| || |||||||||||| |||||| ||||||||||| || ||
Sbjct 1570 ATGAAGATGCTCTAGCAATCGCAGAAAGCATGCCCGAACTACGCCACCTCCAGCTTTTTG 1629
Query 727 GCTAACAGACTAACCAACACAGGCTTGAATGCCATTCTCGACGGTTGTCCTCACCTGGAA 786
| |||| ||||||||| || ||||| |||||||| |||||||||||||||||||||
Sbjct 1630 G-GAACATACTAACCAATGTGGGATTGAACGCCATTCTTGACGGTTGTCCTCACCTGGAA 1688
Query 787 CACCTTGATGTACGCAAGTGTTTCAG-GATT-AGCCTTGTCGGGAATCTTGAGAAGCGAT 844
||||||||| ||||||| |||| || | || | | || |||| |||| ||||||||||
Sbjct 1689 CACCTTGATCTACGCAAATGTTCCAACG-TTGATC-TTACCGGGGATCTAGAGAAGCGAT 1746
Query 845 GT-TTGGAGATGATCAAAGAGTTGAGACGCCCCGGTGACTCAACCGCAGATTACCCATAT 903
| ||| ||| ||||||||| |||| ||||||| |||||||||||| | | ||||||||
Sbjct 1747 GCGTTG-AGAGGATCAAAGATTTGAAACGCCCCAATGACTCAACCGCTGGTCACCCATAT 1805
> Ahg949412 jgi|Araly1|949412|scaffold_801299.1
Length=379
Score = 137 bits (74), Expect = 1e-31
Identities = 219/285 (77%), Gaps = 26/285 (9%)
Strand=Plus/Plus
Query 128 GAAGAAACTGGGTGGATCTTCCGCCGGAGCTGACGA-CTTCGATCCTGCTGCGTCTTAGC 186
||||||||||||||||||||||||||||| |||| | ||||||| || || ||||||| |
Sbjct 45 GAAGAAACTGGGTGGATCTTCCGCCGGAGTTGAC-ATCTTCGATTCTTCTCCGTCTTAAC 103
Query 187 CTGAC-TGATATACTGGACAACGCTCAGAAGGTGTGTAAAGAGTGGCGACGCATTTGTAA 245
| || |||||| || |||||||||||||||| || ||| |||||||||| | ||| |
Sbjct 104 AT-ACATGATATTCTCAACAACGCTCAGAAGGTATGCAAATCGTGGCGACGCGTATGTCA 162
Query 246 AGACCCTTCGATGTGG-CGGAAAATC-A-ACACGC--G--AGACTGCCTC-ATGTAC--- 294
|||||| || |||||| | |||||| | ||||| | | | || |||| |
Sbjct 163 AGACCCATCAATGTGGACC-AAAATCGAGACACGAATGTCAAAAAATTTCGATGT-CTGG 220
Query 295 AACTTTGATTTCGTGAGC-ATGTGCCGTCACATTGTTGATCTCAGCCAG-GGTGGCTTGC 352
|| | ||| ||| ||| |||||||||||| ||||||||||||| | || || ||||
Sbjct 221 AAGTACGATCTCGA-AGCCATGTGCCGTCACGCCGTTGATCTCAGCC-GTGGCGGTTTGC 278
Query 353 TAGAGATCAACGTTGATGAACACTTCTTG-AGCGATTCTCTCCTC 396
| ||||||||| |||| || | || | | |||||||||||||||
Sbjct 279 TGGAGATCAACATTGAAGA-C--TT-TGGGAGCGATTCTCTCCTC 319
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 33929396130
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5