BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G05475.1
Length=930
Score E
Sequences producing significant alignments: (Bits) Value
Ahg942933 jgi|Araly1|942933|scaffold_603477.1 989 0.0
Ahg352457 jgi|Araly1|352457|fgenesh1_pg.C_scaffold_6003050 989 0.0
Ahg887536 jgi|Araly1|887536|Al_scaffold_0320_1 902 0.0
Ahg895252 jgi|Araly1|895252|Al_scaffold_0006_3248 529 2e-149
Ahg943323 jgi|Araly1|943323|scaffold_603867.1 213 2e-54
Ahg949412 jgi|Araly1|949412|scaffold_801299.1 135 4e-31
Ahg333289 jgi|Araly1|333289|fgenesh1_pm.C_scaffold_320000002 121 1e-26
> Ahg942933 jgi|Araly1|942933|scaffold_603477.1
Length=963
Score = 989 bits (535), Expect = 0.0
Identities = 731/822 (89%), Gaps = 28/822 (3%)
Strand=Plus/Plus
Query 115 AACTGGGTGGATCTTCCGCCGGAGTTGACGACTTCGATCCTGCTCCGACTTAGCGTGACT 174
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 93 AACTGGTTGGATCTTCCGCCGGAGTTGACGACTTCGATCCTGCTCCGACTTAGCGTGACT 152
Query 175 GATATACTGGATAACGCTCGGAAACTGTGCAGAGC-GTGGCGACGTATCTGTAAAGACCC 233
||||||||||||||||||||||| |||||||| | ||||||||| | |||||||||||
Sbjct 153 GATATACTGGATAACGCTCGGAAGGTGTGCAGA-CAGTGGCGACGCGTATGTAAAGACCC 211
Query 234 TTCCATGTGGCGGAAAATCAACTTGCGAGACTGCCTCATG-TA-CGAGTTCGATTTCGAG 291
||| ||||||| |||||||||||||||||||||||| || || || |||||||||||||
Sbjct 212 TTCGATGTGGCAGAAAATCAACTTGCGAGACTGCCT-ATTCTATCG-GTTCGATTTCGAG 269
Query 292 AGCATGTGCCGTCACATTGTTGATCTCAGCCAAGGTGGCTTGCTAGAGATTAACATTGAA 351
||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 270 GGCATGTGCCGTCACATTGTTGATCTCAGCCAGGGTGGATTGCTAGAGATTAACATTGAA 329
Query 352 CACTTCGTGAGCGATTCTCTCCTCAGTTACATCGTCGATAGATCATGTAATCTGAAAAGT 411
|| |||||||||||||||||||| || ||||||| |||||||||| ||||||||||||||
Sbjct 330 CATTTCGTGAGCGATTCTCTCCTGAGCTACATCGCCGATAGATCAAGTAATCTGAAAAGT 389
Query 412 CTTGGAATTTCAATCTATGAACCAATGACGAACAAAGGAGTAATGAACGGAATCG-AGAA 470
|||||| |||||||||||||||||||||||||||||||||| |||||||| |||| | ||
Sbjct 390 CTTGGACTTTCAATCTATGAACCAATGACGAACAAAGGAGTTATGAACGGGATCGCA-AA 448
Query 471 ACTTCCACTGCTTGAAACTCTCGTGATCTTCCACTCCTCGATTAAACTGGATTTAAAAGC 530
| ||||| |||||||||| |||| | |||| ||||| ||| ||||||||||||| |||||
Sbjct 449 ATTTCCATTGCTTGAAACCCTCGAGGTCTTTCACTCATCGCTTAAACTGGATTTGAAAGC 508
Query 531 AATAGGCCATGCATGCCCACAACTAAAGACATTGAAGCTAAACTCCTTAGGCT-C--AGA 587
|||||||| | |||||||| ||||||||||||||||||||||||||| ||| | ||
Sbjct 509 TATAGGCCACGTTTGCCCACAGCTAAAGACATTGAAGCTAAACTCCTTATGCTGCCCAGG 568
Query 588 GCTGGCCCATG--A------C-ATAAGCCAGGTAGGCTACATTCCCC-T-TC-TCGAATG 635
|| |||||||| | | ||||||||| ||||| |||| |||| | || |||||||
Sbjct 569 GCCGGCCCATGGCAATTATGCCATAAGCCAGTTAGGCGACATGCCCCCTCTCGTCGAATG 628
Query 636 TGATGATGATGCTCTAGCAATCGCTGAAAGCATGCCCAAACTACGCCACCTCCAGCTTAT 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 629 TGATGATGATGCTCTAGCAATCGCTGAAAGCATGCCCAAACTACGCCACCTCCAGCTTAT 688
Query 696 GGGTAACGGACTAACCAACACTGGCTTGAATGCCATTCTTGACGGTTGTCCTCACCTGGA 755
||| |||||||||||||| || |||||||||| |||||| ||| | ||||||||||||||
Sbjct 689 GGGGAACGGACTAACCAATACAGGCTTGAATGTCATTCTCGACCGCTGTCCTCACCTGGA 748
Query 756 AGAACACCTTGATGTACGCAAGTGTTTCAACATTAACCTTGTCGGGAATCTTGAAAAGCG 815
| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 749 A---CACCTTGATGTACGCAAGTGTTTCAACATGAACCTTGTCGGGAATCTTGAGAAGCG 805
Query 816 ATGTATGAAGAGGATCAAAGAGTTGAGACGGCCCCA-TGACTCAACTGCGGATTACCCGT 874
|||| || |||||||||||||||||||||| |||| ||||||||| || |||||||| |
Sbjct 806 ATGTTTGGAGAGGATCAAAGAGTTGAGACG-CCCCGGTGACTCAACCGCCGATTACCCAT 864
Query 875 ATAGTATCAGTGTGTCAATGGTGGTTCAGATGATGATTACAT 916
||| |||| |||||||| | || ||||||| |||||| |||
Sbjct 865 ATAATATCGGTGTGTCAGTTATGCTTCAGATCATGATTTCAT 906
> Ahg352457 jgi|Araly1|352457|fgenesh1_pg.C_scaffold_6003050
Length=918
Score = 989 bits (535), Expect = 0.0
Identities = 731/822 (89%), Gaps = 28/822 (3%)
Strand=Plus/Plus
Query 115 AACTGGGTGGATCTTCCGCCGGAGTTGACGACTTCGATCCTGCTCCGACTTAGCGTGACT 174
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 70 AACTGGTTGGATCTTCCGCCGGAGTTGACGACTTCGATCCTGCTCCGACTTAGCGTGACT 129
Query 175 GATATACTGGATAACGCTCGGAAACTGTGCAGAGC-GTGGCGACGTATCTGTAAAGACCC 233
||||||||||||||||||||||| |||||||| | ||||||||| | |||||||||||
Sbjct 130 GATATACTGGATAACGCTCGGAAGGTGTGCAGA-CAGTGGCGACGCGTATGTAAAGACCC 188
Query 234 TTCCATGTGGCGGAAAATCAACTTGCGAGACTGCCTCATG-TA-CGAGTTCGATTTCGAG 291
||| ||||||| |||||||||||||||||||||||| || || || |||||||||||||
Sbjct 189 TTCGATGTGGCAGAAAATCAACTTGCGAGACTGCCT-ATTCTATCG-GTTCGATTTCGAG 246
Query 292 AGCATGTGCCGTCACATTGTTGATCTCAGCCAAGGTGGCTTGCTAGAGATTAACATTGAA 351
||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 247 GGCATGTGCCGTCACATTGTTGATCTCAGCCAGGGTGGATTGCTAGAGATTAACATTGAA 306
Query 352 CACTTCGTGAGCGATTCTCTCCTCAGTTACATCGTCGATAGATCATGTAATCTGAAAAGT 411
|| |||||||||||||||||||| || ||||||| |||||||||| ||||||||||||||
Sbjct 307 CATTTCGTGAGCGATTCTCTCCTGAGCTACATCGCCGATAGATCAAGTAATCTGAAAAGT 366
Query 412 CTTGGAATTTCAATCTATGAACCAATGACGAACAAAGGAGTAATGAACGGAATCG-AGAA 470
|||||| |||||||||||||||||||||||||||||||||| |||||||| |||| | ||
Sbjct 367 CTTGGACTTTCAATCTATGAACCAATGACGAACAAAGGAGTTATGAACGGGATCGCA-AA 425
Query 471 ACTTCCACTGCTTGAAACTCTCGTGATCTTCCACTCCTCGATTAAACTGGATTTAAAAGC 530
| ||||| |||||||||| |||| | |||| ||||| ||| ||||||||||||| |||||
Sbjct 426 ATTTCCATTGCTTGAAACCCTCGAGGTCTTTCACTCATCGCTTAAACTGGATTTGAAAGC 485
Query 531 AATAGGCCATGCATGCCCACAACTAAAGACATTGAAGCTAAACTCCTTAGGCT-C--AGA 587
|||||||| | |||||||| ||||||||||||||||||||||||||| ||| | ||
Sbjct 486 TATAGGCCACGTTTGCCCACAGCTAAAGACATTGAAGCTAAACTCCTTATGCTGCCCAGG 545
Query 588 GCTGGCCCATG--A------C-ATAAGCCAGGTAGGCTACATTCCCC-T-TC-TCGAATG 635
|| |||||||| | | ||||||||| ||||| |||| |||| | || |||||||
Sbjct 546 GCCGGCCCATGGCAATTATGCCATAAGCCAGTTAGGCGACATGCCCCCTCTCGTCGAATG 605
Query 636 TGATGATGATGCTCTAGCAATCGCTGAAAGCATGCCCAAACTACGCCACCTCCAGCTTAT 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 606 TGATGATGATGCTCTAGCAATCGCTGAAAGCATGCCCAAACTACGCCACCTCCAGCTTAT 665
Query 696 GGGTAACGGACTAACCAACACTGGCTTGAATGCCATTCTTGACGGTTGTCCTCACCTGGA 755
||| |||||||||||||| || |||||||||| |||||| ||| | ||||||||||||||
Sbjct 666 GGGGAACGGACTAACCAATACAGGCTTGAATGTCATTCTCGACCGCTGTCCTCACCTGGA 725
Query 756 AGAACACCTTGATGTACGCAAGTGTTTCAACATTAACCTTGTCGGGAATCTTGAAAAGCG 815
| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 726 A---CACCTTGATGTACGCAAGTGTTTCAACATGAACCTTGTCGGGAATCTTGAGAAGCG 782
Query 816 ATGTATGAAGAGGATCAAAGAGTTGAGACGGCCCCA-TGACTCAACTGCGGATTACCCGT 874
|||| || |||||||||||||||||||||| |||| ||||||||| || |||||||| |
Sbjct 783 ATGTTTGGAGAGGATCAAAGAGTTGAGACG-CCCCGGTGACTCAACCGCCGATTACCCAT 841
Query 875 ATAGTATCAGTGTGTCAATGGTGGTTCAGATGATGATTACAT 916
||| |||| |||||||| | || ||||||| |||||| |||
Sbjct 842 ATAATATCGGTGTGTCAGTTATGCTTCAGATCATGATTTCAT 883
> Ahg887536 jgi|Araly1|887536|Al_scaffold_0320_1
Length=915
Score = 902 bits (488), Expect = 0.0
Identities = 725/835 (87%), Gaps = 34/835 (4%)
Strand=Plus/Plus
Query 115 AACTGGGTGGATCTTCCGCCGGAGTTGACGACTTCGATCCTGCTCCGACTTAGCGTGACT 174
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 70 AACTGGTTGGATCTTCCGCCGGAGTTGACGACTTCGATCTTGCTCCGACTTAGCGTGACT 129
Query 175 GATATACTGGATAACGCTCGGAAACTGTGCAGAGCG-TGGCGACGTATCTGTAAAGACCC 233
||||||||| |||||||| ||| |||||||| | |||||||| |||||||||||||
Sbjct 130 GATATACTGTTTAACGCTCAGAAGGTGTGCAGA-CAATGGCGACGCGTCTGTAAAGACCC 188
Query 234 TTCCATGTGGCGGAAAATCAACTTGCGAGACTGCCTCATG-TA-CGAGTTCGATTTCGAG 291
||| ||||||| |||||||||||||||||||||||| || || || |||||||||||||
Sbjct 189 TTCGATGTGGCAGAAAATCAACTTGCGAGACTGCCT-ATTCTATCG-GTTCGATTTCGAG 246
Query 292 AGCATGTGCCGTCACATTGTTGATCTCAGCCAAGGTGGCTTGCTAGAGATTAACATTGAA 351
||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||| |
Sbjct 247 GGCATGTGTCGTCACATTGTTGATCTCAGCCAGGGTGGCTTGCTAGAGATCAACATTGGA 306
Query 352 CACTTCGTGAGCGATTCTCTCCTCAGTTACATCGTCGATAGATCATGTAATCTGAAAAGT 411
|||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||
Sbjct 307 CACTTCGTGAGCGATTCTCTCCTCAGCTACATCGCCGATAGATCAAGTAATCTGAAAAGT 366
Query 412 CTTGGAATTTCAATCTATGAACCAATGACGAACAAAGGAGTAATGAACGGAATCG-AGAA 470
|||||| ||||||||||||||| |||||||||| ||||||| ||||| ||||| | | ||
Sbjct 367 CTTGGACTTTCAATCTATGAACAAATGACGAACGAAGGAGTTATGAAGGGAATTGCA-AA 425
Query 471 ACTTCCACTG-CTTGAAACTCTCGTGATCTTCCACTCCTCGATTAAACTGGATTTAAAAG 529
| ||||| || |||||||| ||| | ||||||| || ||| ||||||||||||| || |
Sbjct 426 ATTTCCA-TGGCTTGAAACCCTCCAGGTCTTCCATTCATCGTTTAAACTGGATTTGAAGG 484
Query 530 CAATAGGCCATGCATGCCCACAACTAAAGACATTGAAGCTAAACTCCTTAGGCT-C--AG 586
| |||||||| || |||||||| |||||||||||||||||||||| || ||||| | ||
Sbjct 485 CTATAGGCCACGCTTGCCCACATCTAAAGACATTGAAGCTAAACTTCTCAGGCTGCCCAG 544
Query 587 AGC-TGGCCCATGA-C--ATAAGCCAGGTAGGCTACATTCCCCTTC---TCGAATGTGAT 639
|| || | | | ||||| ||| ||| | |||||||| || |||||||||||
Sbjct 545 GGCATGAAATTT-ATCTTATAAGTCAGTTAGATTTCATTCCCCCTCCCGTCGAATGTGAT 603
Query 640 GATGATGCTCTAGCAATCGCTGAAAGCATGCCCAAACTACGCCACCTCCAGCTTATG-GG 698
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 604 GATGATGCCCTAGCAATCGCTGAAAGCATGCCCAAACTACGCCACCTCCAGCTTATTTGG 663
Query 699 TAACGGACTAACCAACACTGGCTTGAATGCCATTCTTGACGGTTGTCCTCACCTGGAAGA 758
|||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct 664 -AACGGACTGACCAACACTGGCTTGAATGTCATTCTCGACGGTTGTCCTCACCTGGAAGA 722
Query 759 ACACCTTGATGTACGCAAGTGTTTCAACATTAACCTTGTCGGGAATCTTGAAAAGCGATG 818
| | ||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 723 -C-C-TTGATGTGCGCAAGTGTTTCAACATTAAACTTGTCGGGAATCTTGAGAAGCGATG 779
Query 819 TATGAAGAGGATCAAAGAGTTGAGACGGCCCCA-TGACTCAACTGCGGATTACCCGTATA 877
| || |||||||||||||||||||||| |||| ||||||||| || |||||||| ||||
Sbjct 780 TTTGGAGAGGATCAAAGAGTTGAGACG-CCCCGGTGACTCAACCGCCGATTACCCATATA 838
Query 878 GTATCAGTGTGTC-A-A--TGGTGGTTCAGATGATGATTACATCTCGATATCATT 928
|||| ||||||| | | || || ||||||| ||||||| || | ||| |||||
Sbjct 839 ATATCGGTGTGTCGACAACTG-TGCTTCAGATCATGATTAAATGTGGAT-TCATT 891
> Ahg895252 jgi|Araly1|895252|Al_scaffold_0006_3248
Length=1452
Score = 529 bits (286), Expect = 2e-149
Identities = 431/498 (87%), Gaps = 22/498 (4%)
Strand=Plus/Plus
Query 436 ATGACGAACAAAGGAGTAATGAACGGAATCG-AGAAACTTCCACTGCTTGAAACTCTCGT 494
||||||||||||||||| |||||||| |||| | ||| ||||| |||||||||| ||||
Sbjct 1 ATGACGAACAAAGGAGTTATGAACGGGATCGCA-AAATTTCCATTGCTTGAAACCCTCGA 59
Query 495 GATCTTCCACTCCTCGATTAAACTGGATTTAAAAGCAATAGGCCATGCATGCCCACAACT 554
| |||| ||||| ||| ||||||||||||| ||||| |||||||| | |||||||| ||
Sbjct 60 GGTCTTTCACTCATCGCTTAAACTGGATTTGAAAGCTATAGGCCACGTTTGCCCACAGCT 119
Query 555 AAAGACATTGAAGCTAAACTCCTTA-G--GCTCAGAGCTGGCCCAT-G-----A---CAT 602
||||||||||||||||||||||||| | || ||| || ||||||| | | |||
Sbjct 120 AAAGACATTGAAGCTAAACTCCTTATGCTGCCCAGGGCCGGCCCATGGCAATTATGCCAT 179
Query 603 AAGCCAGGTAGGCTACAT-TCCCCT-TC-TCGAATGTGATGATGATGCTCTAGCAATCGC 659
||||||| ||||| |||| ||||| || |||||||||||||||||||||||||||||||
Sbjct 180 AAGCCAGTTAGGCGACATGCCCCCTCTCGTCGAATGTGATGATGATGCTCTAGCAATCGC 239
Query 660 TGAAAGCATGCCCAAACTACGCCACCTCCAGCTTATGGGTAACGGACTAACCAACACTGG 719
||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||
Sbjct 240 TGAAAGCATGCCCAAACTACGCCACCTCCAGCTTATGGGGAACGGACTAACCAATACAGG 299
Query 720 CTTGAATGCCATTCTTGACGGTTGTCCTCACCTGGAAGAACACCTTGATGTACGCAAGTG 779
|||||||| |||||| ||| | ||||||||||||||| ||||||||||||||||||||
Sbjct 300 CTTGAATGTCATTCTCGACCGCTGTCCTCACCTGGAA---CACCTTGATGTACGCAAGTG 356
Query 780 TTTCAACATTAACCTTGTCGGGAATCTTGAAAAGCGATGTATGAAGAGGATCAAAGAGTT 839
||||||||| |||||||||||||||||||| ||||||||| || ||||||||||||||||
Sbjct 357 TTTCAACATGAACCTTGTCGGGAATCTTGAGAAGCGATGTTTGGAGAGGATCAAAGAGTT 416
Query 840 GAGACGGCCCCA-TGACTCAACTGCGGATTACCCGTATAGTATCAGTGTGTCAATGGTGG 898
|||||| |||| ||||||||| || |||||||| |||| |||| |||||||| | ||
Sbjct 417 GAGACG-CCCCGGTGACTCAACCGCCGATTACCCATATAATATCGGTGTGTCAGTTATGC 475
Query 899 TTCAGATGATGATTACAT 916
||||||| |||||| |||
Sbjct 476 TTCAGATCATGATTTCAT 493
> Ahg943323 jgi|Araly1|943323|scaffold_603867.1
Length=1876
Score = 213 bits (115), Expect = 2e-54
Identities = 206/248 (83%), Gaps = 13/248 (5%)
Strand=Plus/Plus
Query 638 ATGATGATGCTCTAGCAATCGCTGAAAGCATGCCCAAACTACGCCACCTCCAGC-TTATG 696
|||| ||||||||||||||||| |||||||||||| |||||||||||||||||| || ||
Sbjct 1570 ATGAAGATGCTCTAGCAATCGCAGAAAGCATGCCCGAACTACGCCACCTCCAGCTTTTTG 1629
Query 697 GGTAACGGACTAACCAACACT-GGCTTGAATGCCATTCTTGACGGTTGTCCTCACCTGGA 755
|| ||| ||||||||| | || ||||| |||||||||||||||||||||||||||||
Sbjct 1630 GG-AACATACTAACCAA-TGTGGGATTGAACGCCATTCTTGACGGTTGTCCTCACCTGGA 1687
Query 756 AGAACACCTTGATGTACGCAAGTGTTTCAACATTAACCTTGTCGGGAATCTTGAAAAGCG 815
| ||||||||| ||||||| |||| |||| || | ||| |||| |||| || |||||
Sbjct 1688 A---CACCTTGATCTACGCAAATGTTCCAACGTTGATCTTACCGGGGATCTAGAGAAGCG 1744
Query 816 ATGTAT-GAAGAGGATCAAAGAGTTGAGACGGCCCCA-TGACTCAACTGC-GGATTACCC 872
||| | || |||||||||||| |||| ||| ||||| ||||||||| || || | ||||
Sbjct 1745 ATGCGTTGA-GAGGATCAAAGATTTGAAACG-CCCCAATGACTCAACCGCTGG-TCACCC 1801
Query 873 GTATAGTA 880
||| |||
Sbjct 1802 ATATGGTA 1809
> Ahg949412 jgi|Araly1|949412|scaffold_801299.1
Length=379
Score = 135 bits (73), Expect = 4e-31
Identities = 212/276 (77%), Gaps = 21/276 (8%)
Strand=Plus/Plus
Query 115 AACTGGGTGGATCTTCCGCCGGAGTTGACGA-CTTCGATCCTGCTCCGACTTAGCGTGAC 173
||||||||||||||||||||||||||||| | ||||||| || ||||| |||| | | ||
Sbjct 50 AACTGGGTGGATCTTCCGCCGGAGTTGAC-ATCTTCGATTCTTCTCCGTCTTAACAT-AC 107
Query 174 -TGATATACTGGATAACGCTCGGAAACTGTGCAGAGCGTGGCGACGTATCTGTAAAGACC 232
|||||| || | ||||||| ||| | |||| | |||||||||| | ||| ||||||
Sbjct 108 ATGATATTCTCAACAACGCTCAGAAGGTATGCAAATCGTGGCGACGCGTATGTCAAGACC 167
Query 233 CTTCCATGTGG-CGGAAAATC-A-ACT----TG-CGAGAC-TGCCTCATGTAC-G-A-GT 280
| || |||||| | |||||| | || || | | | | | |||| | | | ||
Sbjct 168 CATCAATGTGGACC-AAAATCGAGACACGAATGTCAAAAAATTTCG-ATGT-CTGGAAGT 224
Query 281 TCGATTTCGAGAGC-ATGTGCCGTCACATTGTTGATCTCAGCCAAGGTGGCTTGCTAGAG 339
|||| |||| ||| |||||||||||| ||||||||||||| || || ||||| |||
Sbjct 225 ACGATCTCGA-AGCCATGTGCCGTCACGCCGTTGATCTCAGCCGTGGCGGTTTGCTGGAG 283
Query 340 ATTAACATTGAACACTTCGTGAGCGATTCTCTCCTC 375
|| ||||||||| |||| | ||||||||||||||||
Sbjct 284 ATCAACATTGAAGACTTTGGGAGCGATTCTCTCCTC 319
> Ahg333289 jgi|Araly1|333289|fgenesh1_pm.C_scaffold_320000002
Length=675
Score = 121 bits (65), Expect = 1e-26
Identities = 114/136 (84%), Gaps = 10/136 (7%)
Strand=Plus/Plus
Query 627 TCTCG-AATG-TGATGATGATGCTCTAGCAATCGCTGAAAGCATGCCCA-AACTACGCCA 683
||||| |||| ||||||| |||| ||| ||||||| |||||||| ||| ||||||||||
Sbjct 514 TCTCGCAATGATGATGATTATGCCCTATAAATCGCTAAAAGCATG-CCAGAACTACGCCA 572
Query 684 CCTCCAGC-TTATG-G-GTAACGGACTAACCAACACTGGCTTGAATGCCATTCTTGACGG 740
|||||| | ||||| | |||| |||| |||| ||||||||||||||||||||||
Sbjct 573 CCTCCACCTTTATGCGAATAAC---CTAAGTGACACACGCTTGAATGCCATTCTTGACGG 629
Query 741 TTGTCCTCACCTGGAA 756
||||||||||||||||
Sbjct 630 TTGTCCTCACCTGGAA 645
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 34501239885
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5