BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G05505.1
Length=2284
Score E
Sequences producing significant alignments: (Bits) Value
Ahg481143 jgi|Araly1|481143|fgenesh2_kg.4__203__AT4G06570.1 1727 0.0
Ahg497075 jgi|Araly1|497075|fgenesh2_kg.9__40__AT4G05505.1 1709 0.0
Ahg481446 jgi|Araly1|481446|fgenesh2_kg.4__506__AT4G05505.1 1709 0.0
Ahg484611 jgi|Araly1|484611|fgenesh2_kg.5__603__AT4G05505.1 1698 0.0
Ahg475855 jgi|Araly1|475855|fgenesh2_kg.2__985__AT4G06570.1 1613 0.0
Ahg935848 jgi|Araly1|935848|scaffold_500039.1 477 1e-133
> Ahg481143 jgi|Araly1|481143|fgenesh2_kg.4__203__AT4G06570.1
Length=2008
Score = 1727 bits (935), Expect = 0.0
Identities = 1251/1398 (89%), Gaps = 44/1398 (3%)
Strand=Plus/Plus
Query 818 AGTTGATTAGAATAAGAGTTAATATTGAGTAATGTGTGTGTGTATCCT-CAAAGTTGATT 876
||| |||||| | || |||||||||||||||||||||||||||| || | |||| ||||
Sbjct 642 AGTAGATTAGGTTTAGGGTTAATATTGAGTAATGTGTGTGTGTAT-CTGCTAAGTAGATT 700
Query 877 AGGTGTGTAATATATTTAA--TAAGT-TGATTAGGTTAAGCGTTAATATTGAGTAATGTG 933
|||||||| |||| ||| | ||| | |||||||| || |||||||||||||||| ||
Sbjct 701 AGGTGTGT-ATAT-GGTAAGCTGAGTAT-ATTAGGTTTAGGGTTAATATTGAGTAATATG 757
Query 934 TGTATATATGCTAAGTTGATTAGGTTTGTATATGCTAATTGGTTTATGTAATTGAAGGTT 993
||| | |||| |||| || | ||| ||||||||||||||||||||||| |||||
Sbjct 758 TGTGTGTATGGTAAGCTG---A-----GTAGATGCTAATTGGTTTATGTAATTGTAGGTT 809
Query 994 TGGTCACGACAATGGTAAGCTGACCCGGAAGATCACAAAGGTCTTCACAAACAAGTTTAA 1053
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 810 TGGTCACGACAATGGTAAGCTGACCCGGAAGATCACAAAGGTATTCACAAACAAGTTTAA 869
Query 1054 TGGGCCATTTTACAGTTGGAGCTGTGTACCTACTGAAAGAAGACACATATACTTCCTCGA 1113
|||||||| ||||| |||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct 870 TGGGCCATATTACAATTGGAGTTGTGTACCTACTGAAAGAAGACACAAATACTTCCTCGA 929
Query 1114 ATTCGCAATAAATTAACTTCTA-TCTCTTATTAATCTCTTACATTTGGTTTGGTTTGGTT 1172
|||||| |||||||||||||| | || | | | || |||||||||||||||||||
Sbjct 930 ATTCGCGGTAAATTAACTTCTATTGTC-T-GT-A--TC---CATTTGGTTTGGTTTGGTT 981
Query 1173 GTTTGATCACTAACATCAAACTCTCCTCTTGTTTTGTAGAGTACACACACATGGCATCCA 1232
||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct 982 GTTTGATCACTAACATCAAACTCTCCTCTTGTTTTATAGAAAACACACACATGGCATCCA 1041
Query 1233 TCACTGACTGGTGTAGTTGAAGAAAAATTCTT-TAAAATATGTCAAAC-GCGTATGAAGG 1290
|||||||| |||||| ||||||| ||||| || |||||||||| | | |||||||||||
Sbjct 1042 TCACTGACCGGTGTAATTGAAGAGAAATT-TTACAAAATATGTC-AGCTGCGTATGAAGG 1099
Query 1291 ACATGGTTTCTAAGGCTTGCGCAAAACGTGCAAATGAGCGACCGCCATGGATTGAGAAGA 1350
|||||||||||||||||||| ||||||| || | |||| |||||||||||||||||||||
Sbjct 1100 ACATGGTTTCTAAGGCTTGCTCAAAACGAGCCACTGAGAGACCGCCATGGATTGAGAAGA 1159
Query 1351 CATTGTGGAAGGAAATGTGTGCGTATTGGGACACAAAAGAAGCCATTGCCAAGAGTTCAA 1410
||||||||||||||||||||| ||||| ||||||| |||||||| |||||||||||||||
Sbjct 1160 CATTGTGGAAGGAAATGTGTGAGTATTTGGACACAGAAGAAGCCCTTGCCAAGAGTTCAA 1219
Query 1411 CCACATCAGCAGCTTGAATGTCTGACCGTAATGGTCCTGGTCCTCACAAACATGTATCGG 1470
|||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 1220 CCACATCAGCAGCTCGAATGTCTGACCGTAATGGTCTTGGTCCTCACAAGCATGTATCGG 1279
Query 1471 GGCCAAAGTCTTTCTTACAGATTGAGCAAGAGATAGTAAGTTACATTTGTTTATTTATAG 1530
||||||||||||||||||| || ||||||||||| |||||||||| | | | |
Sbjct 1280 GGCCAAAGTCTTTCTTACAAATCGAGCAAGAGATGGTAAGTTACA-TCAAGCA-CTCT-- 1335
Query 1531 AATGATT-TTTATTAAGAGTCTGAATTGTTTTGTGAACAACATTTCAGGAAATTGAGTTG 1589
|| || |||||||||| | | |||| ||||||||||||||||||||||||||||| ||
Sbjct 1336 --TGTTTATTTATTAAGAATTTAAATTTTTTTGTGAACAACATTTCAGGAAATTGAGCTG 1393
Query 1590 GGAAGACCACCTACTATTGGTGAGATATTCGTTAAGACTCATACCAAAAAAGATGGGACT 1649
|||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |
Sbjct 1394 GGAAGACCACCTACTATTGGTGAGATATTCATTAGGACTCATACCAAAAAAGATGGGAGT 1453
Query 1650 TTTGTTGATAGGAAGGCGCATGAAATTCATGAGGCATATTTGAGGAACAAGGAAGCTAAG 1709
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 1454 TTTGTTGATAGGAAGGCGCAGGAAATTCATGAGGCATATTTGAAGAACAAGGAAGCTAAG 1513
Query 1710 TTGGCTGCCCGTGAGAATGATGAAGGGTCAGATGGTACTTCCCGTCGATCAGAACTATCT 1769
|||||||||| || ||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 1514 TTGGCTGCCCTTGTGAATGATGAAGGGTCTGATGGTACATCCCGTCGATCAGAACTATCT 1573
Query 1770 CAGGAGGAGGATGATGAGGTCTTCCTTCAGGTAATG-GTCTTGTTCCTCTTGTCtttttt 1828
|| ||||||||||||||| ||||||||| ||||||| | ||| ||||||| | ||||||
Sbjct 1574 CAAGAGGAGGATGATGAGATCTTCCTTCTGGTAATGTGG-TTGATCCTCTT-T-TTTTTT 1630
Query 1829 -ttAT-ATTATCACTTGCTTCATCTTTTCTACAA-TAATCCTCTTGTCTTTTGTTTGCAG 1885
|||| |||||||||| ||||||||||| | || ||||||||||||||||| |||||||
Sbjct 1631 ATTATTATTATCACTTACTTCATCTTTTA-AGAACTAATCCTCTTGTCTTTTTTTTGCAG 1689
Query 1886 TCAACTGTCACAAACAAGAGATGGGTATACTTTGGAATGGGAAGCTTAGGGAGGTACATC 1945
||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||
Sbjct 1690 TCAACTGTCACAAACGAGAGAGGGGTATACTTCGGAATGGGAAGCTTAGGGAGGTACATC 1749
Query 1946 AATGGAAAGCGGAAGTACCCAGGCTGCAGTTCTGCTTTCACTACCTTGCAGTCACAGCTT 2005
||||| ||| ||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 1750 AATGGGAAGAGGAAGTACCCAGGAAGCAGTTCTGCTTTCACTTCCTTGCAGTCACAGCTT 1809
Query 2006 TAGGAAGCCAACTGCAAGATAGAAGAACAAGCGACTCTCCAGGCACATCGTGAGGCAGAG 2065
||||||||||| ||||||||||||||||||||| |||||| |||||||| |||||||||
Sbjct 1810 GAGGAAGCCAACCGCAAGATAGAAGAACAAGCGAATCTCCAAGCACATCGGGAGGCAGAG 1869
Query 2066 GCATTGAGGGTGAAAGCTGAGCAAGCAGATATCAAGCGTGTTGCTAATGAGCAACAAGAA 2125
|||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct 1870 GCATTGCGGGTGAAAGCTGAGCAAGCAGAGATCAAGCGTGTTGCTAATGAGCAACAAGCA 1929
Query 2126 GAGATCAAACACTTGAGGATGGTTAAGAAGTACTTGACAGAAAGAGACCCCAAGTTTCTC 2185
||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||
Sbjct 1930 GAGATCAAACACTTGAGGATGGTGAAGAAGTACTTGACCGAAACTGACCCCAAGTTTCTC 1989
Query 2186 GCATTCCTCGAGTCTGCT 2203
|| |||||||||||||||
Sbjct 1990 GCCTTCCTCGAGTCTGCT 2007
Score = 512 bits (277), Expect = 4e-144
Identities = 480/574 (84%), Gaps = 30/574 (5%)
Strand=Plus/Plus
Query 112 AATCGAAGGCCCAGTGGTCATCCCAGCCACTACGAGTTCACGCTGGTGATTCGTCCAGCC 171
|||||||| || || |||| ||||| ||| || |||||||||| || || ||||| ||||
Sbjct 90 AATCGAAGACCTAGGGGTCTTCCCATCCAGTATGAGTTCACGCCGGCGAATCGTCAAGCC 149
Query 172 CCGCTTCAAGATTTTGAACATCATCCGACTGCACAGCCTTCAACGGGTCCATCCGTCAGG 231
|| |||||||||| |||||| | |||| |||||||||| ||||||||||| || |||||
Sbjct 150 CCTCTTCAAGATTCTGAACAAGAGCCGATTGCACAGCCTCCAACGGGTCCAACCATCAGG 209
Query 232 GACTATCCTCCTCCGACGCAACTTTTCCAGTCAGGCGAAGGGTCTCCTCGCGGATCTTGT 291
||||||||||| ||||||||||||||||||||||||||||| ||||||||| |
Sbjct 210 GACTATCCTCCCCCGACGCAACTTTTCCAGTCAGGCGAAGGATCTCCTCGC--A------ 261
Query 292 TCTCCTCGTGGATCTGGATCGACTCTGTTTTGAGCATCCGGCTCGACTCAACCTAGATCT 351
||||||| ||||||| ||| |||||||||| || |||||||||||||||
Sbjct 262 ----------GATCTGGCTCGACTCCATTTCGAGCATCCGGATCTACTCAACCTAGATCT 311
Query 352 GGAGGATCTGTTCATCGTCTAGCCTCTACGG-CGAGACAATC--TC-C-AGCGGCGGTTC 406
|||||||||||||||||||||||||| | | | | |||||| || | |||| ||||||
Sbjct 312 GGAGGATCTGTTCATCGTCTAGCCTCCAAGTTCAA-ACAATCAGTCTCCAGCGCCGGTTC 370
Query 407 A-CAAGAATGCCTCCAATCAGTCTATAGCGCTGGTTCAACGAGAAGCATCCAATCCTCTA 465
| | ||| ||||||||||||||| ||||| ||||||||| ||||| || ||||||| |
Sbjct 371 AACGGGAA-GCCTCCAATCAGTCTCCAGCGCCGGTTCAACGGGAAGCCTCAAATCCTCCA 429
Query 466 CTTCCGCAAGCCTCAAATCCTCTACCTCGAGCCTATGTATCTCATCACAGCTCTCAAGCT 525
| || ||| || |||||||||| ||||||||||| |||||| ||||||||||||||||||
Sbjct 430 CCTCGGCAGGCGTCAAATCCTCCACCTCGAGCCTCTGTATCACATCACAGCTCTCAAGCT 489
Query 526 CAAAACTCACACGCGGAGGAAGATGAAGATGATGATGCTGAGTTTGTGGCTGATCT-TGA 584
||||||||||| ||||| |||||||||||||| || |||||||||| ||||||| | |||
Sbjct 490 CAAAACTCACATGCGGAAGAAGATGAAGATGAGGAAGCTGAGTTTGAGGCTGAT-TATGA 548
Query 585 AAGGGAATCAACTCTCCCTGAAGCTTTGCTTGCAAATCTACATGACATGCTTGC-CCAGC 643
||||||||||||||||||||||| || |||||| | ||| ||||| ||||| | || ||
Sbjct 549 AAGGGAATCAACTCTCCCTGAAGATTCGCTTGCCACTCTCCATGAGTTGCTT-CTCCGGC 607
Query 644 CAGGCCGTGAGAAGTATACAACGGTTATCTCTCC 677
|||| |||||||||||||||||||| ||||||||
Sbjct 608 CAGGACGTGAGAAGTATACAACGGTCATCTCTCC 641
> Ahg497075 jgi|Araly1|497075|fgenesh2_kg.9__40__AT4G05505.1
Length=2060
Score = 1709 bits (925), Expect = 0.0
Identities = 1256/1408 (89%), Gaps = 54/1408 (4%)
Strand=Plus/Plus
Query 818 AGTTGATTAGAATAAGAGTTAATATTGAGTAATGTGTGTGTGTATCCT-CAAAGTTGATT 876
||| |||||| | || |||||||||||||||||||||||||||| || | |||| ||||
Sbjct 685 AGTAGATTAGGTTTAGGGTTAATATTGAGTAATGTGTGTGTGTAT-CTGCTAAGTAGATT 743
Query 877 AGGTGTGTAATATATTTAA--TAAGT-TGATTAGGTTAAGCGTTAATATTGAGTAATGTG 933
|||||||| |||| ||| | ||| | |||||||| || |||||||||||||||| ||
Sbjct 744 AGGTGTGT-ATAT-GGTAAGCTGAGTAT-ATTAGGTTTAGGGTTAATATTGAGTAATATG 800
Query 934 TGTATATATGCTAAGTTGATTAGGTTTGTAT--A---TGCTAATTGGTTTATGTAATTGA 988
||| | |||| |||| ||| ||| ||||||| | ||||||||||||||||||||||
Sbjct 801 TGTGTGTATGGTAAGCTGAGTAGATTTGTATAAAGCTTGCTAATTGGTTTATGTAATTGT 860
Query 989 AGGTTTGGTCACGACAATGGTAAGCTGACCCGGAAGATCACAAAGGTCTTCACAAACAAG 1048
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 861 AGGTTTGGTCACGACAATGGTAAGCTGACCCGGAAGATCACAAAGGTATTCACAAACAAG 920
Query 1049 TTTAATGGGCCATTTTACAGTTGGAGCTGTGTACCTACTGAAAGAAGACACATATACTTC 1108
|||||||| |||| ||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 921 TTTAATGGACCATATTACAATTGGAGCTGTGTACCTACTGAAAGAAGACACAAATACTTC 980
Query 1109 CTCGAATTCGCAATAAATTAACTTCTA-TCTCTTATTAATCTCTTACATTTGGTTTGGTT 1167
||||||||||| |||||||||||||| | || | | | || ||||||||||||||
Sbjct 981 CTCGAATTCGCGGTAAATTAACTTCTATTGTC-T-GT-A--TC---CATTTGGTTTGGTT 1032
Query 1168 TGGTTGTTTGATCACTAACATCAAACTCTCCTCTTGTTTTGTAGAGTACACACACATGGC 1227
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1033 TGGTTGTTTGATCACTAACATCAAACTCTCCTCTTGTTTTGTAGAAAACACACACATGGC 1092
Query 1228 ATCCATCACTGACTGGTGTAGTTGAAGAAAAATTCTTTAAAATATGTCAAAC-GCGTATG 1286
||||||||||||| |||||| ||||||| ||||||| |||||||||| | | |||||||
Sbjct 1093 ATCCATCACTGACCGGTGTAATTGAAGAGAAATTCTACAAAATATGTC-AGCTGCGTATG 1151
Query 1287 AAGGACATGGTTTCTAAGGCTTGCGCAAAACGTGCAAATGAGCGACCGCCATGGATTGAG 1346
|||||||||||||||||||||||| ||||||| || | |||| |||||||||||||||||
Sbjct 1152 AAGGACATGGTTTCTAAGGCTTGCTCAAAACGAGCCACTGAGAGACCGCCATGGATTGAG 1211
Query 1347 AAGACATTGTGGAAGGAAATGTGTGCGTATTGGGACACAAAAGAAGCCA-TTGCCAAGAG 1405
||||||||||||||||||||||||| ||||||||||||| |||||| || ||||||||||
Sbjct 1212 AAGACATTGTGGAAGGAAATGTGTGAGTATTGGGACACAGAAGAAG-CACTTGCCAAGAG 1270
Query 1406 TTCAACCACATCAGCAGCTTGAATGTCTGACCGTAATGGTCCTGGTCCTCACAAACATGT 1465
||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||
Sbjct 1271 TTCAACCACATCAGCAGCTCGAATGTCTGACCGTAATGGTCTTGGTCCTCACAAGCATGT 1330
Query 1466 ATCGGGGCCAAAGTCTTTCTTACAGATTGAGCAAGAGATAGTAAG-T---T--A-CA-T- 1516
|||||||||||||||||||||||| || ||||||||||| ||||| | | | || |
Sbjct 1331 ATCGGGGCCAAAGTCTTTCTTACAAATCGAGCAAGAGATGGTAAGTTACATCAAGCACTC 1390
Query 1517 TTGTTTATTTATAGAATGATTTTTATTAAGAGTCTGAATTGTTTTGTGAACAACATTTCA 1576
||||||||||| | |||| |||| |||||| | |||||| |||||||||||||||||||
Sbjct 1391 TTGTTTATTTACATAATGGTTTTCCTTAAGAATTTGAATTTTTTTGTGAACAACATTTCA 1450
Query 1577 GGAAATTGAGTTGGGAAGACCACCTACTATTGGTGAGATATTCGTTAAGACTCATACCAA 1636
|||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 1451 GGAAATTGAGCTGGGAAGACCACCTACTATTGGTGAGATATTCATTAGGACTCATACCAA 1510
Query 1637 AAAAGATGGGACTTTTGTTGATAGGAAGGCGCATGAAATTCATGAGGCATATTTGAGGAA 1696
||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct 1511 AAAAGATGGGAGTTTTGTTGATAGGAAGGCGCAGGAAATTCATGAGGCATATTTGAAGAA 1570
Query 1697 CAAGGAAGCTAAGTTGGCTGCCCGTGAGAATGATGAAGGGTCAGATGGTACTTCCCGTCG 1756
||||||||||||||||||||||| || ||||||||||||||| |||||||| ||||||||
Sbjct 1571 CAAGGAAGCTAAGTTGGCTGCCCTTGTGAATGATGAAGGGTCTGATGGTACATCCCGTCG 1630
Query 1757 ATCAGAACTATCTCAGGAGGAGGATGATGAGGTCTTCCTTCAGGTAATGGTCTTGTTCCT 1816
||||||||||||||| ||||||||||||||| |||||||| | | | | |
Sbjct 1631 ATCAGAACTATCTCAAGAGGAGGATGATGAGATCTTCCTT----T--T-G----G----T 1675
Query 1817 CTTGTCttttttttATATTATCACTTGCTTCATCTTTTCTACAA-TAATCCTCTTGTCTT 1875
||| |||||| | ||||||||||| ||||||||||| | || |||||||||||| ||
Sbjct 1676 AATGT-TTTTTTAT-TATTATCACTTACTTCATCTTTT-AAGAACTAATCCTCTTGTTTT 1732
Query 1876 TTGTTTGCAGTCAACTGTCACAAACAAGAGATGGGTATACTTTGGAATGGGAAGCTTAGG 1935
|| |||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||
Sbjct 1733 TTTTTTGCAGTCAACTGTCACAAACGAGAGAGGGGTATACTTCGGAATGGGAAGCTTAGG 1792
Query 1936 GAGGTACATCAATGGAAAGCGGAAGTACCCAGGCTGCAGTTCTGCTTTCACTACCTTGCA 1995
||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 1793 GAGGTACATCAATGGGAAGCGGAAGTACCCAGGAAGCAGTTCTGCTTTCACTTCCTTGCA 1852
Query 1996 GTCACAGCTTTAGGAAGCCAACTGCAAGATAGAAGAACAAGCGACTCTCCAGGCACATCG 2055
|||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct 1853 GTCACAGCTTGAGGAAGCCAACCGCAAGATAGAAGAACAAGCGACTCTCCAAGCACATCG 1912
Query 2056 TGAGGCAGAGGCATTGAGGGTGAAAGCTGAGCAAGCAGATATCAAGCGTGTTGCTAATGA 2115
||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1913 GGAGGCAGAGGCATTGCGGGTGAAAGCTGAGCAAGCAGAGATCAAGCGTGTTGCTAATGA 1972
Query 2116 GCAACAAGAAGAGATCAAACACTTGAGGATGGTTAAGAAGTACTTGACAGAAAGAGACCC 2175
|||||||| |||||||||||||||||| ||||| |||||||||||||| |||| |||||
Sbjct 1973 GCAACAAGCAGAGATCAAACACTTGAGCATGGTGAAGAAGTACTTGACCGAAACTGACCC 2032
Query 2176 CAAGTTTCTCGCATTCCTCGAGTCTGCT 2203
|||||||||||| |||||||||||||||
Sbjct 2033 CAAGTTTCTCGCCTTCCTCGAGTCTGCT 2060
Score = 516 bits (279), Expect = 3e-145
Identities = 551/674 (82%), Gaps = 51/674 (8%)
Strand=Plus/Plus
Query 57 AAATCGACCCACTTCTTCCCAGCCAGTTCGAGTTGAACCGAAGACTAGGGCATCAAATCG 116
|||||||||||||||||||||||| || ||||||||| ||||||| | | |||||
Sbjct 63 AAATCGACCCACTTCTTCCCAGCCTGTACGAGTTGAATCGAAGAC-----C-TTGAATCG 116
Query 117 AAGGCCCAGTGGTCATCCCAGCCACTACGAGTTCACGCTGGTGATTCGTCCAGCCCCGCT 176
||| || || |||| ||||||||| ||||||||||||| || || ||||| |||||| ||
Sbjct 117 AAGACCTAGGGGTCTTCCCAGCCAGTACGAGTTCACGCCGGCGAATCGTCAAGCCCCACT 176
Query 177 TCAAGATTTTGAACATCATCCGACTGCACAGCCTTCAACGGGTCCATCCGTCAGGGACTA 236
|||||||| |||||| | |||| |||||| ||| ||||||||||| || ||||||||||
Sbjct 177 TCAAGATTCTGAACAAGAGCCGATTGCACAACCTCCAACGGGTCCAACCATCAGGGACTA 236
Query 237 TCCTCCTCCGACGCAACTTTTCCAGTCAGGCGAAGGGTCTCCTCGCGGATCTTGTTCTCC 296
|||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||
Sbjct 237 TCCTCCTCCGACGCAACTTTTCCAGTCAGGCGAAGGATCTCCTCGCGGATCTGG--CTC- 293
Query 297 TCGTGGATCTGGATCGACTCTGTTTTGAGCATCCGGCTCGACTCAACCTAGATCTGGAGG 356
| | || | | | | | ||||||| || |||||||||||||||||||||||
Sbjct 294 --G---A-CTC---C-A-T-T-TC--GAGCATCTGGATCGACTCAACCTAGATCTGGAGG 338
Query 357 ATCT-G----TTCATCGTCTAGCCTCTACGGCGAGACAATCTCCAGCGGCGGTTCA-CAA 410
|||| | |||| || ||||| || | || ||| ||||| ||| ||| |
Sbjct 339 ATCTCGCCGGTTCAACGGGAAGCCT--ACA---AT-CAGTCTACAGCGCCGGATCAACGG 392
Query 411 GAATGCCTCCAATCAGTCTATAGCGCTGGTTCAAC-GAGAAGCATCCAATCCTCTACTTC 469
||| ||||||||||||||| ||||| |||||||| | ||||| |||||||||| || ||
Sbjct 393 GAA-GCCTCCAATCAGTCTCCAGCGCCGGTTCAACCG-GAAGCCTCCAATCCTCCACCTC 450
Query 470 CGCAAGCCTCAAATCCTCTACCTCGAGCCTATGTATCTCATCACAGCTCTCAAGCTCAAA 529
||| || |||||||||| ||||||||||| |||||| ||||||||||||||||||||||
Sbjct 451 GGCAGGCGTCAAATCCTCCACCTCGAGCCTCTGTATCACATCACAGCTCTCAAGCTCAAA 510
Query 530 ACTCACACGCGGAGGAAGATGAAGATGATGATGCTGAGTTTGTGGCTGATCT-TGAAAGG 588
||||||| ||||| |||||||||||||| || |||||| | ||||| | |||||||
Sbjct 511 ACTCACATGCGGAAGAAGATGAAGATGAGGAAGCTGAG---G---CTGAT-TATGAAAGG 563
Query 589 GAATCAACTCTCCCTGAAGCTTTGCTTGCAAATCTACATGACATGCTTGC-CCAGCCAGG 647
||||||||||||||||||| || |||||| | ||| ||||| ||||| | || ||||||
Sbjct 564 GAATCAACTCTCCCTGAAGATTCGCTTGCTACTCTCCATGAGTTGCTT-CTCCGGCCAGG 622
Query 648 CCGTGAGAAGTATACAACGGTTATCTCTCCCACATTTGAGCCTCTAACCGTAT-GGTAAG 706
|||||||||||||||||||| ||||||||||||||||||||| |||| ||| ||||||
Sbjct 623 ACGTGAGAAGTATACAACGGTCATCTCTCCCACATTTGAGCCTGAAACC-TATTGGTAAG 681
Query 707 CTGAGAATATTAGG 720
||||| | ||||||
Sbjct 682 CTGAGTAGATTAGG 695
> Ahg481446 jgi|Araly1|481446|fgenesh2_kg.4__506__AT4G05505.1
Length=2055
Score = 1709 bits (925), Expect = 0.0
Identities = 1257/1409 (89%), Gaps = 55/1409 (4%)
Strand=Plus/Plus
Query 818 AGTTGATTAGAATAAGAGTTAATATTGAGTAATGTGTGTGTGTATCCT-CAAAGTTGATT 876
||| |||||| | || |||||||||||||||||||||||||||| || | |||| ||||
Sbjct 679 AGTAGATTAGGTTTAGGGTTAATATTGAGTAATGTGTGTGTGTAT-CTGCTAAGTAGATT 737
Query 877 AGGTGTGTAATATATTTAA--TAAGT-TGATTAGGTTAAGCGTTAATATTGAGTAATGTG 933
|||||||| |||| ||| | ||| | |||||||| || |||||||||||||||| ||
Sbjct 738 AGGTGTGT-ATAT-GGTAAGCTGAGTAT-ATTAGGTTTAGGGTTAATATTGAGTAATATG 794
Query 934 TGTATATATGCTAAGTTGATTAGGTTTGTAT--A---TGCTAATTGGTTTATGTAATTGA 988
||| | |||| |||| ||| ||| || |||| | ||||||||||||||||||||||
Sbjct 795 TGTGTGTATGGTAAGCTGAGTAGATTAGTATAAAGCTTGCTAATTGGTTTATGTAATTGT 854
Query 989 AGGTTTGGTCACGACAATGGTAAGCTGACCCGGAAGATCACAAAGGTCTTCACAAACAAG 1048
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 855 AGGTTTGGTCACGACAATGGTAAGCTGACCCGGAAGATCACAAAGGTATTCACAAACAAG 914
Query 1049 TTTAATGGGCCATTTTACAGTTGGAGCTGTGTACCTACTGAAAGAAGACACATATACTTC 1108
||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 915 TTTAATGGGCCATATTACAATTGGAGCTGTGTACCTACTGAAAGAAGACACAAATACTTC 974
Query 1109 CTCGAATTCGCAATAAATTAACTTCTA-TCTCTTATTAATCTCTTACATTTGGTTTGGTT 1167
||||||||||| |||||||||||||| | || | | | || ||||||||||||||
Sbjct 975 CTCGAATTCGCGGTAAATTAACTTCTATTGTC-T-GT-A--TC---CATTTGGTTTGGTT 1026
Query 1168 TGGTTGTTTGATCACTAACATCAAACTCTCCTCTTGTTTTGTAGAGTACACACACATGGC 1227
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1027 TGGTTGTTTGATCACTAACATCAAACTCTCCTCTTGTTTTGTAGAAAACACACACATGGC 1086
Query 1228 ATCCATCACTGACTGGTGTAGTTGAAGAAAAATTCTTTAAAATATGTCAAAC-GCGTATG 1286
||||||||||||| |||||| ||||||| ||||||| |||||||||| | | |||||||
Sbjct 1087 ATCCATCACTGACCGGTGTAATTGAAGAGAAATTCTACAAAATATGTC-AGCTGCGTATG 1145
Query 1287 AAGGACATGGTTTCTAAGGCTTGCGCAAAACGTGCAAATGAGCGACCGCCATGGATTGAG 1346
|||||||||||||||||||||||| ||||||| || | |||| |||||||||||||||||
Sbjct 1146 AAGGACATGGTTTCTAAGGCTTGCTCAAAACGAGCCACTGAGAGACCGCCATGGATTGAG 1205
Query 1347 AAGACATTGTGGAAGGAAATGTGTGCGTATTGGGACACAAAAGAAGCCA-TTGCCAAGAG 1405
||||||||||||||||||||||||| ||||||||||||| |||||| || ||||||||||
Sbjct 1206 AAGACATTGTGGAAGGAAATGTGTGAGTATTGGGACACAGAAGAAG-CACTTGCCAAGAG 1264
Query 1406 TTCAACCACATCAGCAGCTTGAATGTCTGACCGTAATGGTCCTGGTCCTCACAAACATGT 1465
||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||
Sbjct 1265 TTCAACCACATCAGCAGCTCGAATGTCTGACCGTAATGGTCTTGGTCCTCACAAGCATGT 1324
Query 1466 ATCGGGGCCAAAGTCTTTCTTACAGATTGAGCAAGAGATAGTAAG-T---T--A-CA-T- 1516
|||||||||||||||||||||||| || ||||||||||| ||||| | | | || |
Sbjct 1325 ATCGGGGCCAAAGTCTTTCTTACAAATCGAGCAAGAGATGGTAAGTTACATCAAGCACTC 1384
Query 1517 TTGTTTATTTATAGAATGATTTTTATTAAGAGTCTGAATTGTTTTGTGAACAACATTTCA 1576
||||||||||| | |||| |||| |||||| | |||||| |||||||||||||||||||
Sbjct 1385 TTGTTTATTTACATAATGGTTTTCCTTAAGAATTTGAATTTTTTTGTGAACAACATTTCA 1444
Query 1577 GGAAATTGAGTTGGGAAGACCACCTACTATTGGTGAGATATTCGTTAAGACTCATACCAA 1636
|||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 1445 GGAAATTGAGCTGGGAAGACCACCTACTATTGGTGAGATATTCATTAGGACTCATACCAA 1504
Query 1637 AAAAGATGGGACTTTTGTTGATAGGAAGGCGCATGAAATTCATGAGGCATATTTGAGGAA 1696
||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct 1505 AAAAGATGGGAGTTTTGTTGATAGGAAGGCGCAGGAAATTCATGAGGCATATTTGAAGAA 1564
Query 1697 CAAGGAAGCTAAGTTGGCTGCCCGTGAGAATGATGAAGGGTCAGATGGTACTTCCCGTCG 1756
||||||||||||||||||||||| || ||||||||||||||| |||||||| ||||||||
Sbjct 1565 CAAGGAAGCTAAGTTGGCTGCCCTTGTGAATGATGAAGGGTCTGATGGTACATCCCGTCG 1624
Query 1757 ATCAGAACTATCTCAGGAGGAGGATGATGAGGTCTTCCTTCAGGTAATGGTCTTGTTCCT 1816
||||||||||||||| ||||||||||||||| ||||||||| |||||
Sbjct 1625 ATCAGAACTATCTCAAGAGGAGGATGATGAGATCTTCCTTCTGGTAA------------- 1671
Query 1817 CTTGTCttttttttATATTATCACTTGCTTCATCTTTTCTACAA-TAATCCTCTTGTC-T 1874
||| |||||| | ||||||||||| ||||||||||| | || ||||||||||||| |
Sbjct 1672 --TGT-TTTTTTAT-TATTATCACTTACTTCATCTTTT-AAGAACTAATCCTCTTGTCTT 1726
Query 1875 TTTGTTTGCAGTCAACTGTCACAAACAAGAGATGGGTATACTTTGGAATGGGAAGCTTAG 1934
||| |||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||
Sbjct 1727 TTTTTTTGCAGTCAACTGTCACAAACGAGAGAGGGGTATACTTCGGAATGGGAAGCTTAG 1786
Query 1935 GGAGGTACATCAATGGAAAGCGGAAGTACCCAGGCTGCAGTTCTGCTTTCACTACCTTGC 1994
|||||||||||||||| ||||||||| ||||||| ||||||||||||||||| ||||||
Sbjct 1787 GGAGGTACATCAATGGGAAGCGGAAGCACCCAGGAAGCAGTTCTGCTTTCACTTCCTTGC 1846
Query 1995 AGTCACAGCTTTAGGAAGCCAACTGCAAGATAGAAGAACAAGCGACTCTCCAGGCACATC 2054
||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct 1847 AGTCACAGCTTGAGGAAGCCAACCGCAAGATAGAAGAACAAGCGACTCTCCAAGCACATC 1906
Query 2055 GTGAGGCAGAGGCATTGAGGGTGAAAGCTGAGCAAGCAGATATCAAGCGTGTTGCTAATG 2114
| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct 1907 GGGAGGCAGAGGCATTGCGGGTGAAAGCTGAGCAAGCAGAGATCAAGCGTGTTGCTAATG 1966
Query 2115 AGCAACAAGAAGAGATCAAACACTTGAGGATGGTTAAGAAGTACTTGACAGAAAGAGACC 2174
||||||||| |||||||||||||||||||||||| |||||||||||||| |||| ||||
Sbjct 1967 AGCAACAAGCAGAGATCAAACACTTGAGGATGGTGAAGAAGTACTTGACCGAAACTGACC 2026
Query 2175 CCAAGTTTCTCGCATTCCTCGAGTCTGCT 2203
||||||||||||| || ||||||||||||
Sbjct 2027 CCAAGTTTCTCGCCTTTCTCGAGTCTGCT 2055
Score = 536 bits (290), Expect = 2e-151
Identities = 599/737 (81%), Gaps = 65/737 (9%)
Strand=Plus/Plus
Query 1 ATGAAGACAT-GTGGTGG---AGGCAAGAGAGGAAGAGGAAGTGTATCAAACATT--CCC 54
|||||||| | ||||||| |||||||||||| | ||| | | ||| || ||| |||
Sbjct 1 ATGAAGAC-TCGTGGTGGAAAAGGCAAGAGAGG-A-AGG--G-G-ATCGAAGATTCCCCC 53
Query 55 TC-AAATCGACCCACTTCTTCCCAGCCAGTTCGAGTTGAACCGAAGACTAGGGCATCAAA 113
| |||||||||||||||||||||||| || ||||||||| ||||||| | | ||
Sbjct 54 CCAAAATCGACCCACTTCTTCCCAGCCTGTACGAGTTGAATCGAAGAC-----C-TTGAA 107
Query 114 TCGAAGGCCCAGTGGTCATCCCAGCCACTACGAGTTCACGCTGGTGATTCGTCCAGCCCC 173
|||||| || || |||| ||||||||| ||||||||||||| || || ||||| ||||||
Sbjct 108 TCGAAGACCTAGGGGTCTTCCCAGCCAGTACGAGTTCACGCCGGCGAATCGTCAAGCCCC 167
Query 174 GCTTCAAGATTTTGAACATCATCCGACTGCACAGCCTTCAACGGGTCCATCCGTCAGGGA 233
|||||||||| |||||| | |||| |||||| ||| ||||||||||| || |||||||
Sbjct 168 ACTTCAAGATTCTGAACAAGAGCCGATTGCACAACCTCCAACGGGTCCAACCATCAGGGA 227
Query 234 CTATCCTCCTCCGACGCAACTTTTCCAGTCAGGCGAAGGGTCTCCTCGCGGATCTTGTTC 293
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |
Sbjct 228 CTATCCTCCTCCGACGCAACTTTTCCAGTCAGGCGAAGGATCTCCTCGCGGATCTGG--C 285
Query 294 TCCTCGTGGATCTGGATCGACTCTGTTTTGAGCATCCGGCTCGACTCAACCTAGATCTGG 353
|| | | || | | | | | |||||||||| ||||||||||||||||||||
Sbjct 286 TC---G---A-CTC---C-A-T-T-TC--GAGCATCCGGATCGACTCAACCTAGATCTGG 329
Query 354 AGGATCT-GT---T-CATCGTCTAGCCTCTACGGCGAGACAATCTCCAGCGGCGGTTCA- 407
||||||| || | || || ||| | ||| | || ||||||||| |||||||
Sbjct 330 AGGATCTCGTCGGTTCAACGGGAAGC-T-TACA---AT-CAGTCTCCAGCGCCGGTTCAA 383
Query 408 CAAGAATGCCTCCAATCAGTCTATAGCGCTGGTTCAAC-GAGAAGCATCCAATCCTCTAC 466
| ||| ||||||||||||||| ||||| |||||||| | ||||| |||||||||| ||
Sbjct 384 CGGGAA-GCCTCCAATCAGTCTCCAGCGCCGGTTCAACCG-GAAGCCTCCAATCCTCCAC 441
Query 467 TTCCGCAAGCCTCAAATCCTCTACCTCGAGCCTATGTATCTCATCACAGCTCTCAAGCTC 526
|| ||| || |||||||||| ||||||||||| |||||| |||||||||||||||||||
Sbjct 442 CTCGGCAGGCGTCAAATCCTCCACCTCGAGCCTCTGTATCACATCACAGCTCTCAAGCTC 501
Query 527 AAAACTCACACGCGGAGGAAGATGAAGATGATGATGCTGAGTTTGTGGCTGATCT-TGAA 585
|||||||||| ||||| |||||||||||||| || |||||| | ||||| | ||||
Sbjct 502 AAAACTCACATGCGGAAGAAGATGAAGATGAGGAAGCTGAG---G---CTGAT-TATGAA 554
Query 586 AGGGAATCAACTCTCCCTGAAGCTTTGCTTGCAAATCTACATGACATGCTTGCC-CAGCC 644
|||||||||||||||||||||| || |||||| | ||| ||||| ||||| | |||||
Sbjct 555 AGGGAATCAACTCTCCCTGAAGATTCGCTTGCTACTCTCCATGAGTTGCTT-CTTCAGCC 613
Query 645 AGGCCGTGAGAAGTATACAACGGTTATCTCTCCCACATTTGAGCCTCTAACCGTAT-GGT 703
||| |||||||||| ||||||||| ||||||||||||||||||||| |||| ||| |||
Sbjct 614 AGGACGTGAGAAGTTTACAACGGTCATCTCTCCCACATTTGAGCCTGGAACC-TATTGGT 672
Query 704 AAGCTGAGAATATTAGG 720
|||||||| | ||||||
Sbjct 673 AAGCTGAGTAGATTAGG 689
> Ahg484611 jgi|Araly1|484611|fgenesh2_kg.5__603__AT4G05505.1
Length=2008
Score = 1698 bits (919), Expect = 0.0
Identities = 1256/1410 (89%), Gaps = 57/1410 (4%)
Strand=Plus/Plus
Query 818 AGTTGATTAGAATAAGAGTTAATATTGAGTAATGTGTGTGTGTATCCT-CAAAGTTGATT 876
||| |||||| | || |||||||||||||||||||||||||||| || | |||| ||||
Sbjct 632 AGTAGATTAGGTTTAGGGTTAATATTGAGTAATGTGTGTGTGTAT-CTGCTAAGTAGATT 690
Query 877 AGGTGTGTAATATATTTAA--TAAGT-TGATTAGGTTAAGCGTTAATATTGAGTAATGTG 933
|||||||| |||| ||| | ||| | |||||||| || |||||||||||||||| ||
Sbjct 691 AGGTGTGT-ATAT-GGTAAGCTGAGTAT-ATTAGGTTTAGGGTTAATATTGAGTAATATG 747
Query 934 TGTATATATGCTAAGTTGATTAGGTTTGTAT--A---TGCTAATTGGTTTATGTAATTGA 988
||| | |||| |||| ||| ||| ||||||| | ||||||||||||||||||||||
Sbjct 748 TGTGTGTATGGTAAGCTGAGTAGATTTGTATAAAGCTTGCTAATTGGTTTATGTAATTGT 807
Query 989 AGGTTTGGTCACGACAATGGTAAGCTGACCCGGAAGATCACAAAGGTCTTCACAAACAAG 1048
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 808 AGGTTTGGTCACGACAATGGTAAGCTGACTCGGAAGATCACAAAGGTATTCACAAACAAG 867
Query 1049 TTTAATGGGCCATTTTACAGTTGGAGCTGTGTACCTACTGAAAGAAGACACATATACTTC 1108
||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 868 TTTAATGGGCCATATTACAATTGGAGCTGTGTACCTACTGAAAGAAGACACAAATACTTC 927
Query 1109 CTCGAATTCGCAATAAATTAACTTCTA-TCTCTTATTAATCTCTTACATTTGGTTTGGTT 1167
||| ||||||| |||||||||||||| | || | | | || ||||||||||||||
Sbjct 928 CTCAAATTCGCGGTAAATTAACTTCTATTGTC-T-GT-A--TC---CATTTGGTTTGGTT 979
Query 1168 TGGTTGTTTGATCACTAACATCAAACTCTCCTCTTGTTTTGTAGAGTACACACACATGGC 1227
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 980 TGGTTGTTTGATCACTAACATCAAACTCTCCTCTTGTTTTGTAGAAAACACACACATGGC 1039
Query 1228 ATCCATCACTGACTGGTGTAGTTGAAGAAAAATTCTTTAAAATATGTCAAAC-GCGTATG 1286
||||||||||||| |||||| ||||||| ||||||| ||||||||||| | |||||||
Sbjct 1040 ATCCATCACTGACCGGTGTAATTGAAGAGAAATTCTACAAAATATGTCAG-CTGCGTATG 1098
Query 1287 AAGGACATGGTTTCTAAGGCTTGCGCAAAACGTGCAAATGAGCGACCGCCATGGATTGAG 1346
|||||||||||||||||||||||| ||||||| || | |||| |||||||||||||||||
Sbjct 1099 AAGGACATGGTTTCTAAGGCTTGCTCAAAACGAGCCACTGAGAGACCGCCATGGATTGAG 1158
Query 1347 AAGACATTGTGGAAGGAAATGTGTGCGTATTGGGACACAAAAGAAGC-CATTGCCAAGAG 1405
||||||||||||||||||||||||| ||||||||||||| ||||||| | ||||||||||
Sbjct 1159 AAGACATTGTGGAAGGAAATGTGTGAGTATTGGGACACAGAAGAAGCAC-TTGCCAAGAG 1217
Query 1406 TTCAACCACATCAGCAGCTTGAATGTCTGACCGTAATGGTCCTGGTCCTCACAAACATGT 1465
||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||
Sbjct 1218 TTCAACCACATCAGCAGCTCGAATGTCTGACCGTAATGGTCTTGGTCCTCACAAGCATGT 1277
Query 1466 ATCGGGGCCAAAGTCTTTCTTACAGATTGAGCAAGAGATAGTAAGTTACAT-------T- 1517
|||||||||||||||||||||||| || ||||||||||| ||||||||||| |
Sbjct 1278 ATCGGGGCCAAAGTCTTTCTTACAAATCGAGCAAGAGATGGTAAGTTACATCAAGCACTC 1337
Query 1518 T-GTTTATTTATAGAATGATTTTTATTAAGAGTCTGAATTGTTTTGTGAACAACATTTCA 1576
| ||||||||| | |||| |||| |||||| | |||||| |||||||||||||||||||
Sbjct 1338 TTGTTTATTTACATAATGGTTTTCCTTAAGAATTTGAATTTTTTTGTGAACAACATTTCA 1397
Query 1577 GGAAATTGAGTTGGGAAGACCACCTACTATTGGTGAGATATTCGTTAAGACTCATACCAA 1636
|||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 1398 GGAAATTGAGCTGGGAAGACCACCTACTATTGGTGAGATATTCATTAGGACTCATACCAA 1457
Query 1637 AAAAGATGGGACTTTTGTTGATAGGAAGGCGCATGAAATTCATGAGGCATATTTGAGGAA 1696
||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct 1458 AAAAGATGGGAGTTTTGTTGATAGGAAGGCGCAGGAAATTCATGAGGCATATTTGAAGAA 1517
Query 1697 CAAGGAAGCTAAGTTGGCTGCCCGTGAGAATGATGAAGGGTCAGATGGTACTTCCCGTCG 1756
||||||||||||||||||||||| || ||||||||||||||| |||||||| ||||||||
Sbjct 1518 CAAGGAAGCTAAGTTGGCTGCCCTTGTGAATGATGAAGGGTCTGATGGTACATCCCGTCG 1577
Query 1757 ATCAGAACTATCTCAGGAGGAGGATGATGAGGTCTTCCTTCAGGTAATGGTCTTGTTCCT 1816
||||||||||||||| ||||||||||||||| ||||||||| ||||||| |||| || |
Sbjct 1578 ATCAGAACTATCTCAAGAGGAGGATGATGAGATCTTCCTTCTGGTAATG-TCTT-TT--T 1633
Query 1817 CTTGTCttttttttATATTATCACTTGCTTCATCTTTTCTACAA-TAATCCTCTTGTCTT 1875
|| | | || | ||||||| ||||||||||| | || |||||||||| ||||
Sbjct 1634 -TTAT-T-------AT-T-ATCACTTACTTCATCTTTTA-AGAACTAATCCTCTTATCTT 1681
Query 1876 TTGTTTGCAGTCAACTGTCACAAACAAGAGATGGGTATACTTTGGAATGGGAAGCTTAGG 1935
|| |||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||
Sbjct 1682 TT-TTTGCAGTCAACTGTCACAAACGAGAGAGGGGTATACTTCGGAATGGGAAGCTTAGG 1740
Query 1936 GAGGTACATCAATGGAAAGCGGAAGTACCCAGGCTGCAGTTCTGCTTTCACTACCTTGCA 1995
||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 1741 GAGGTACATCAATGGGAAGCGGAAGTACCCAGGAAGCAGTTCTGCTTTCACTTCCTTGCA 1800
Query 1996 GTCACAGCTTTAGGAAGCCAACTGCAAGATAGAAGAACAAGCGACTCTCCAGGCACATCG 2055
|||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct 1801 GTCACAGCTTGAGGAAGCCAACCGCAAGATAGAAGAACAAGCGACTCTCCAAGCACATCG 1860
Query 2056 TGAGGCAGAGGCATTGAGGGTGAAAGCTGAGCAAGCAGATATCAAGCGTGTTGCTAATGA 2115
||||||||||||| | |||||||||||||||||||||| |||||||||||| |||||||
Sbjct 1861 GGAGGCAGAGGCATCGCGGGTGAAAGCTGAGCAAGCAGAGATCAAGCGTGTTACTAATGA 1920
Query 2116 GCAACAAG-AAGAGATCAAACACTTGAGGATGGTTAAGAAGTACTTGAC-AGAAAGAGAC 2173
|||||||| || |||||||||||||||||||||| |||||||||||||| | ||| |||
Sbjct 1921 GCAACAAGCAA-AGATCAAACACTTGAGGATGGTGAAGAAGTACTTGACCA-AAACTGAC 1978
Query 2174 CCCAAGTTTCTCGCATTCCTCGAGTCTGCT 2203
|||||||||||||| || ||||||||||||
Sbjct 1979 CCCAAGTTTCTCGCCTTTCTCGAGTCTGCT 2008
Score = 322 bits (174), Expect = 7e-87
Identities = 284/335 (85%), Gaps = 16/335 (5%)
Strand=Plus/Plus
Query 391 TCTCCAGCGGCGGTTC-ACAAGAATGCCTCCAATCAGTCTATAGCGCTGGTTCAA-CGAG 448
||||||||| |||||| || ||| ||||| ||||||||| ||| | ||||||| || |
Sbjct 319 TCTCCAGCGCCGGTTCAACGGGAA-GCCTCTAATCAGTCTCCAGCACCGGTTCAACCG-G 376
Query 449 AAGCATCCAATCCTCTACTTCCGCAAGCCTCAAATCCTCTACCTCGAGCCTATGTATCTC 508
|||| |||||||||| || || ||| || |||||||||| ||||||||||| |||||| |
Sbjct 377 AAGCCTCCAATCCTCCACCTCGGCAGGCGTCAAATCCTCCACCTCGAGCCTCTGTATCAC 436
Query 509 ATCACAGCTCTCAAGCTCAAAACTCACACGCGGAGGAAGATGAAGATGATGATGCTGAGT 568
|||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||||
Sbjct 437 ATCACAGCTCTCAAGCTCAAAACTCACATGCGGAAGAAGATGAAGATGAGGAAGCTGAG- 495
Query 569 TTGTGGCTGATCT-TGAAAGGGAATCAACTCTCCCTGAAGCTTTGCTTGCAAATCTACAT 627
| ||||| | |||||||||||||||||||||||||| || |||||| | ||| |||
Sbjct 496 --G---CTGAT-TATGAAAGGGAATCAACTCTCCCTGAAGATTCGCTTGCTACTCTCCAT 549
Query 628 GACATGCTTGC-CCAGCCAGGCCGTGAGAAGTATACAACGGTTATCTCTCCCACATTTGA 686
|| ||||| | || |||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 550 GAGTTGCTT-CTCCGGCCAGGACGTGAGAAGTATACAACGGTCATCTCTCCCACATTTGA 608
Query 687 GCCTCTAACCGTAT-GGTAAGCTGAGAATATTAGG 720
|||| |||| ||| ||||||||||| | ||||||
Sbjct 609 GCCTGAAACC-TATTGGTAAGCTGAGTAGATTAGG 642
Score = 211 bits (114), Expect = 2e-53
Identities = 194/232 (84%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 31 AGAGGAAGTGTATCAAACATT-CCCTC-AAATCGACCCACTTCTTCCCAGCCAGTTCGAG 88
|||||||| | ||| || ||| ||| | |||||||||||||||||||||||| || |||
Sbjct 20 AGAGGAAGGGGATCGAAGATTCCCCCCAAAATCGACCCACTTCTTCCCAGCCTGTAGGAG 79
Query 89 TTGAACCGAAGACTAGGGCATCAAATCGAAGGCCCAGTGGTCATCCCAGCCACTACGAGT 148
||||| |||||||| | |||||||| || || |||| ||||||||| |||||||
Sbjct 80 TTGAATCGAAGACT------TTGAATCGAAGACCTAGGGGTCTTCCCAGCCAGTACGAGT 133
Query 149 TCACGCTGGTGATTCGTCCAGCCCCGCTTCAAGATTTTGAACATCATCCGACTGCACAGC 208
|||||| || || ||||| |||||| |||||||||| |||||| | |||| |||||| |
Sbjct 134 TCACGCCGGCGAATCGTCAAGCCCCACTTCAAGATTCTGAACAAGAGCCGATTGCACAAC 193
Query 209 CTTCAACGGGTCCATCCGTCAGGGACTATCCTCCTCCGACGCAACTTTTCCA 260
|| ||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 194 CTCCAACGGGTCCAACCATCAGGGACTATCCTCCTCCGACGCAACTTTTCCA 245
Score = 56.5 bits (30), Expect = 8e-07
Identities = 30/30 (100%), Gaps = 0/30 (0%)
Strand=Plus/Plus
Query 348 ATCTGGAGGATCTGTTCATCGTCTAGCCTC 377
||||||||||||||||||||||||||||||
Sbjct 246 ATCTGGAGGATCTGTTCATCGTCTAGCCTC 275
> Ahg475855 jgi|Araly1|475855|fgenesh2_kg.2__985__AT4G06570.1
Length=1713
Score = 1613 bits (873), Expect = 0.0
Identities = 1233/1398 (88%), Gaps = 60/1398 (4%)
Strand=Plus/Plus
Query 818 AGTTGATTAGAATAAGAGTTAATATTGAGTAATGTGTGTGTGTATCCTCAAAGTTGATTA 877
||| |||||| | || |||||||||||||| ||||||||| ||| || |||| |||||
Sbjct 367 AGTAGATTAGGTTTAGGGTTAATATTGAGTAGTGTGTGTGTATATGCT--AAGTAGATTA 424
Query 878 GGTGTGTAATATATTTAA--TAAGTTGATTAGGTTAAGCGTTAATATTGAGTAATGTGTG 935
||||||| |||| ||| | ||| ||||||||| || ||||||||| | | |
Sbjct 425 GGTGTGT-ATAT-GGTAAGCTGAGTAGATTAGGTTTAGGGTTAATATT--G--A-----G 473
Query 936 TATATATGCTAAGTTGATTAGGTTTGTATATGCTAATTGGTTTATGTAATTGAAGGTTTG 995
|| ||||| | | || | ||||||| ||||||||||||||||||||||| |||||||
Sbjct 474 TA-ATATG-T--G-TG--T--GTTTGTAGATGCTAATTGGTTTATGTAATTGTAGGTTTG 524
Query 996 GTCACGACAATGGTAAGCTGACCCGGAAGATCACAAAGGTCTTCACAAACAAGTTTAATG 1055
|||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct 525 GTCACGACGATGGTAAGCTGACCTAGAAGATCACAAAGGTATTCACAAACAAGTTTAATG 584
Query 1056 GGCCATTTTACAGTTGGAGCTGTGTACCTACTGAAAGAAGACACATATACTTCCTCGAAT 1115
|||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 585 GGCCATATTACAGTTGGAGCTGTGTACCTACTGAAAAAAGACACAAATACTTCCTCGAAT 644
Query 1116 TCGCAATAAATTAACTTCTATCTCTTAT-TAATCTCTTACATTTGGTTTGGTTTGGTTGT 1174
|||| |||||||| || |||||||| | | || | ||||||||||||||||||||
Sbjct 645 TCGCGGTAAATTAA---CT-TCTCTTATCT-GTATC-T--ATTTGGTTTGGTTTGGTTGT 696
Query 1175 TTGATCACTAACATCAAACTCTCCTCTTGTTTTGTAGAGTACACACACATGGCATCCATC 1234
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 697 TTGATCACTAACATCAAACTCTCCTCTTGTTTTGTAGAAAACACACACATGGCATCCATC 756
Query 1235 ACTGACTGGTGTAGTTGAAGAAAAATTCTTTAAAATATGTCAAAC-GCGTATGAAGGACA 1293
|||||| ||||| ||||||| ||||||| ||||||||| | ||||||||||||||
Sbjct 757 ACTGACCAGTGTAATTGAAGAGAAATTCTACAAAATATGTGGG-CTGCGTATGAAGGACA 815
Query 1294 TGGTTTCTAAGGCTTGCGCAAAACGTGCAAATGAGCGACCGCCATGGATTGAGAAGACAT 1353
||||||||||||||||| ||||||| || |||||| ||||||||||||||||||||||||
Sbjct 816 TGGTTTCTAAGGCTTGCTCAAAACGAGCCAATGAGAGACCGCCATGGATTGAGAAGACAT 875
Query 1354 TGTGGAAGGAAATGTGTGCGTATTGGGACACAAAAGAAGCCATTGCCAAGAGTTCAACCA 1413
|||||||||||||||||| ||||| ||||||| |||||||||||||||||| ||||||||
Sbjct 876 TGTGGAAGGAAATGTGTGAGTATTAGGACACAGAAGAAGCCATTGCCAAGATTTCAACCA 935
Query 1414 CATCAGCAGCTTGAATGTCTGACCGTAATGGTCCTGGTCCTCACAAACATGTATCGGGGC 1473
||||||||||| ||||||||||||||||||||| |||||||||||| ||| ||||||||
Sbjct 936 CATCAGCAGCTCGAATGTCTGACCGTAATGGTCTTGGTCCTCACAAGCATTTATCGGGGT 995
Query 1474 CAAAGTCTTTCTTACAGATTGAGCAAGAGATAGTAAGTTACATTT-GTTTATT-TATAGA 1531
|||||||||||||||| || ||||||||||| ||||||||||| | | | | | |
Sbjct 996 CAAAGTCTTTCTTACAAATCGAGCAAGAGATGGTAAGTTACATCAAGC--ACTCT-T-GT 1051
Query 1532 ATGATTTTTATTAAGAGTCTGAATTGTTTTGTGAACAACATTTCAGGAAATTGAGTTGGG 1591
| |||| | |||||| | |||||| ||||||||||||||||||||||||||||| ||||
Sbjct 1052 TT-ATTTAT-TTAAGATTTTGAATT-TTTTGTGAACAACATTTCAGGAAATTGAGCTGGG 1108
Query 1592 AAGACCACCTACTATTGGTGAGATATTCGTTAAGACTCATACCAAAAAAGATGGGACTTT 1651
|||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct 1109 AAGACCACCTACTATTGGTGAGATATTCCTTAGGACTCATACCAAAAAAGATGGGACTTT 1168
Query 1652 TGTTGATAGGAAGGCGCATGAAATTCATGAGGCATATTTGAGGAACAAGGAAGCTAAGTT 1711
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct 1169 TGTTGATAGGAAGGCGCAGGAAATTCATGAGGCATATTTGAAGAACAAGGAAGCTAAGTT 1228
Query 1712 GGCTGCCCGTGAGAATGATGAAGGGTCAGATGGTACTTCCCGTCGATCAGAACTATCTCA 1771
|||||||| |||||||||||||||||| || ||||| |||||||||||||||||||||||
Sbjct 1229 GGCTGCCCTTGAGAATGATGAAGGGTCTGACGGTACATCCCGTCGATCAGAACTATCTCA 1288
Query 1772 GGAGGAGGATGATGAGGTCTTCCTTCAGGTAATG-GTCTTGTTCCTCTTGTCtttttttt 1830
||||||||||||||| |||||||||| |||||| | || | |||||| | ||||
Sbjct 1289 AGAGGAGGATGATGAGATCTTCCTTCATGTAATGTGGCTAAT-CCTCTT-T-TTTTA--- 1342
Query 1831 ATATTATCACTTGCTTCATCTTTTCTACAA-TAATCCTCTTGTCTTTTGTTTGCAGTCAA 1889
| ||| ||||| ||||||||| | | || ||||||||||||||||| |||||||| ||
Sbjct 1343 A-ATT--CACTTACTTCATCTTATA-AGAACTAATCCTCTTGTCTTTT-TTTGCAGT-AA 1396
Query 1890 CTGTCACAAACAAGAGATGGGTATACTTTGGAATGGGAAGCTTAGGGAGGTACATCAATG 1949
||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct 1397 CTGTCACAAACGAGAGAGGGGTATACTTCGGAATGGGAAGCTTAGGGAGGTACATCAATG 1456
Query 1950 GAAAGCGGAAGTACCCAGGCTGCAGTTCTGCTTTCACTACCTTGCAGTCACAGCTTTAGG 2009
| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||
Sbjct 1457 GGAAGCGGAAGTACCCAGGAAGCAGTTCTGCTTTCACTTCCTTGCAGTCACAGCTTGAGG 1516
Query 2010 AAGCCAACTGCAAGATAGAAGAACAAGCGACTCTCCAGGCACATCGTGAGGCAGAGGCAT 2069
|||||||| ||||||||||||||||||| |||||||| |||||||||||||||||| ||
Sbjct 1517 AAGCCAACCGCAAGATAGAAGAACAAGCAACTCTCCAAGCACATCGTGAGGCAGAGATAT 1576
Query 2070 TGAGGGTGAAAGCTGAGCAAGCAGATATCAAGCGTGTTGCTAATGAGCAACAAGAAGAGA 2129
|| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 1577 TGCCGGTGAAAGCTGAGCAAGCAGAGATCAAGCGTGTTGCTAATGAGCAACAAGCAGAGA 1636
Query 2130 TCAAACACTTGAGGATGGTTAAGAAGTACTTGACAGAAAGAGACCCCAAGTTTCTCG-CA 2188
||||||||||||||||||| |||||||||||||| |||| |||||||||||||||| |
Sbjct 1637 TCAAACACTTGAGGATGGTGAAGAAGTACTTGACCGAAACTGACCCCAAGTTTCTCGTC- 1695
Query 2189 TTCCTCGAGTCTGCTGGT 2206
||||||||||||||||||
Sbjct 1696 TTCCTCGAGTCTGCTGGT 1713
Score = 313 bits (169), Expect = 4e-84
Identities = 232/263 (88%), Gaps = 2/263 (1%)
Strand=Plus/Plus
Query 112 AATCGAAGGCCCAGTGGTCATCCCAGCCACTACGAGTTCACGCTGGTGATTCGTCCAGCC 171
|||||||| || || |||| ||||||||| ||||||||||||| ||||| ||||| ||||
Sbjct 73 AATCGAAGACCTAGGGGTCTTCCCAGCCAGTACGAGTTCACGCCGGTGAATCGTCAAGCC 132
Query 172 CCGCTTCAAGATTTTGAACATCATCCGACTGCACAGCCTTC-AACGGGTCCATCCGTCAG 230
|| |||||||||| |||||| | |||| ||||||||| || |||||||||| || | ||
Sbjct 133 CCTCTTCAAGATTCTGAACAAGAGCCGATTGCACAGCC-TCTAACGGGTCCAACCATAAG 191
Query 231 GGACTATCCTCCTCCGACGCAACTTTTCCAGTCAGGCGAAGGGTCTCCTCGCGGATCTTG 290
||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct 192 GGACTATCCTCATCCGATGCAACTTTTCCAGTCAGGCGAAGGATCTCCTCGCGGATCTCC 251
Query 291 TTCTCCTCGTGGATCTGGATCGACTCTGTTTTGAGCATCCGGCTCGACTCAACCTAGATC 350
||||||||| ||||||||| |||||| ||| |||||| ||| |||||||||||||||||
Sbjct 252 TTCTCCTCGCGGATCTGGAGCGACTCCATTTCGAGCATACGGATCGACTCAACCTAGATC 311
Query 351 TGGAGGATCTGTTCATCGTCTAG 373
|||||||||||||||||||||||
Sbjct 312 TGGAGGATCTGTTCATCGTCTAG 334
> Ahg935848 jgi|Araly1|935848|scaffold_500039.1
Length=745
Score = 477 bits (258), Expect = 1e-133
Identities = 601/755 (80%), Gaps = 70/755 (9%)
Strand=Plus/Plus
Query 1 ATGAAGACAT-GTGGTGG---AGGCAAGAGAGGAAGAGGAAGTGTATCAAACATT--CCC 54
|||||||| | ||||||| |||||||||||| | ||| | | ||| || ||| |||
Sbjct 21 ATGAAGAC-TCGTGGTGGAAAAGGCAAGAGAGG-A-AGG--G-G-ATCGAAGATTCCCCC 73
Query 55 TC-AAATCGACCCACTTCTTCCCAGCCAGTTCGAGTTGAACCGAAGACTAGGGCATCAAA 113
| |||||||||||||||||||||||| || ||||||||| ||||||| | | ||
Sbjct 74 CCAAAATCGACCCACTTCTTCCCAGCCTGTACGAGTTGAATCGAAGAC-----C-TTGAA 127
Query 114 TCGAAGGCCCAGTGGTCATCCCAGCCACTACGAGTTCACGCTGGTGATTCGTCCAGCCCC 173
|||||| || || |||| ||||||||| ||||||||||||| || || ||||| ||||||
Sbjct 128 TCGAAGACCTAGGGGTCTTCCCAGCCATTACGAGTTCACGCCGGCGAATCGTCAAGCCCC 187
Query 174 GCTTCAAGATTTTGAACATCATCCGACTGCACAGCCTTCAACGGGTCCATCCGTCAGGGA 233
|||||||||| |||||| | |||| |||||| ||| ||||||||||| || |||||||
Sbjct 188 ACTTCAAGATTCTGAACAAGAGCCGATTGCACAACCTCCAACGGGTCCAACCATCAGGGA 247
Query 234 CTATCCTCCTCCGACGCAACTTTTCCAGTCAGGCGAAGGGTCTCCTCGCGGATCTTG-T- 291
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| | |
Sbjct 248 CTATCCTCCTCCGACGCAACTTTTCCAGTCAGGTGAAGGATCTCCTCGCGGATCTGGCTC 307
Query 292 -TCTCC---TCGTGGATCTGGATCGACT----CT-G-TTTTGAGCATCCG-GC-TCG--- 336
|||| ||| | ||| ||||||||| || | | | ||| ||| | | |||
Sbjct 308 GACTCCATTTCGAGCATCCGGATCGACTCAACCTAGATCTGGAGGATCTGTTCATCGTCT 367
Query 337 A--CT-CAACCTAGATCTGGAG-GATCTGTTCATCGTCTAGCCTCTACGGCGAGA-CAAT 391
| || ||| | || ||| || | | ||||| || || || || | | | || |
Sbjct 368 AGCCTCCAATC-AG-TCTCCAGCG-CCGGTTCAACGGGAAG-CT-TA---C-A-ATCAGT 417
Query 392 CTCCAGCGGCGGTTC-ACAAGAATGCCTCCAATCAGTCTATAGCGCT-GGTTCAA-CGAG 448
|||||||| |||||| || ||| ||||||||||||||| |||| | ||||||| || |
Sbjct 418 CTCCAGCGCCGGTTCAACGGGAA-GCCTCCAATCAGTCTCCAGCG-TCGGTTCAACCG-G 474
Query 449 AAGCATCCAATCCTCTACTTCCGCAAGCCTCAAATCCTCTACCTCGAGCCTATGTATCTC 508
|||| |||||||||| || || ||| || |||||||||| ||||||||||| |||||| |
Sbjct 475 AAGCCTCCAATCCTCCACCTCGGCAGGCGTCAAATCCTCCACCTCGAGCCTCTGTATCAC 534
Query 509 ATCACAGCTCTCAAGCTCAAAACTCACACGCGGAGGAAGATGAAGATGATGATGCTGAGT 568
|||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||||
Sbjct 535 ATCACAGCTCTCAAGCTCAAAACTCACATGCGGAAGAAGATGAAGATGAGGAAGCTGAG- 593
Query 569 TTGTGGCTGATCT-TGAAAGGGAATCAACTCTCCCTGAAGCTTTGCTTGCAAATCTACAT 627
| || || | |||||||||||||||||| ||||||| || |||||| | ||| |||
Sbjct 594 --G---CTAAT-TATGAAAGGGAATCAACTCTTCCTGAAGATTCGCTTGCTACTCTCCAT 647
Query 628 GACATGCTTGCC-CAGCCAGGCCGTGAGAAGTATACAACGGTTATCTCTCCCACATTTGA 686
|| ||||| | |||||||| |||||||||| ||||||||| |||||||||||||||||
Sbjct 648 GAGTTGCTT-CTTCAGCCAGGACGTGAGAAGTTTACAACGGTCATCTCTCCCACATTTGA 706
Query 687 GCCTCTAACCGTAT-GGTAAGCTGAGAATATTAGG 720
|||| |||| ||| ||||||||||| | ||||||
Sbjct 707 GCCTGGAACC-TATTGGTAAGCTGAGTAGATTAGG 740
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 86007773210
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5