BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G05540.1 Length=2070 Score E Sequences producing significant alignments: (Bits) Value Ahg895489 jgi|Araly1|895489|Al_scaffold_0006_3485 2785 0.0 Ahg947346 jgi|Araly1|947346|scaffold_703575.1 763 0.0 Ahg891304 jgi|Araly1|891304|Al_scaffold_0007_3290 752 0.0 Ahg493692 jgi|Araly1|493692|fgenesh2_kg.7__3125__AT5G37160.1 691 0.0 Ahg355656 jgi|Araly1|355656|fgenesh1_pg.C_scaffold_7002829 667 0.0 > Ahg895489 jgi|Araly1|895489|Al_scaffold_0006_3485 Length=2448 Score = 2785 bits (1508), Expect = 0.0 Identities = 1887/2066 (91%), Gaps = 41/2066 (2%) Strand=Plus/Plus Query 30 CGTGGATGACTTAAACCCACTGATTCTTGCG-TATGTGTTCTCTGTTGGAGATGAGCTAC 88 ||||||||||||||||||||||||||||| | |||||||||||||||| |||||| |||| Sbjct 381 CGTGGATGACTTAAACCCACTGATTCTTG-GATATGTGTTCTCTGTTGAAGATGAACTAC 439 Query 89 ATTTCTCTGTTCATTCCTCTAAATCTATATCCATTGATGAGCAATATTCGTTTCGTTCGG 148 ||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||| Sbjct 440 ATTTCTCTGTTCATTCCTCCAAAACTATATCCATTGATGAGCAATTTTCGTTTCGTTCGG 499 Query 149 GtttttttCTTAT-ATACTTAACCACAAACACTCGTATCTGGAAGGCTTTGCACAACGGA 207 || ||||||| || | | |||||||||||||||||||||||||||||||||||||||||| Sbjct 500 GTGTTTTTCTCATGA-ATTTAACCACAAACACTCGTATCTGGAAGGCTTTGCACAACGGA 558 Query 208 GATGGAAACTTGAGTCTCATCAAGAGTGTCCTTCAAGCAAATACCGCGGATACAGAGCAA 267 ||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 559 GATGGCAACTTGGGTCTCATCAAGAGTGTCCTTCAGGCAAATACCGCGGATACAGAGCAC 618 Query 268 TCTGTTTCTTCTAGGAATTGGGGGAATCATGTGT-T-AGATATTATACGATCAGCGAATT 325 |||||||||||||||||||||||||| | |||| | |||||||| || || || || | Sbjct 619 CCTGTTTCTTCTAGGAATTGGGGGAAT-A-GTGTATGGGATATTATGCGTTCTGCAAAGT 676 Query 326 TGAACTCTTCTCAAGAATCTGCAATTTTG-GCTTGCCTT-GAGACAAGAGAA-ATCCGCG 382 ||||| ||||||| ||||||||||||||| | ||| ||| ||||||||| || | || | Sbjct 677 TGAACCCTTCTCAGGAATCTGCAATTTTGAG-TTG-CTTGGAGACAAGA-AATTTACGTG 733 Query 383 ACAAGACTAGTGTGAAACTGATATGGGGACCCCCTGGTACCGGTAACACAAAGACAGTCG 442 |||||||||||||||||||||| |||||||| ||||||||||| || ||||| ||||| | Sbjct 734 ACAAGACTAGTGTGAAACTGATTTGGGGACCACCTGGTACCGGCAAGACAAAAACAGTTG 793 Query 443 CTACTCTTCTGTTTGCTCTTCTCAGCCTAAGTTGCAAAACAGTTGTGTGCACTCCTACAA 502 |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct 794 CTACTCTTCTGTTTGCTCTTCTCAACCTAAGTTGCAAAACAGTTGTGTGTGCTCCTACAA 853 Query 503 ACACGGCTGTAGTAGCAGTTGCATCAAGGCTCTTGGCGCTATTTAAGGAATCTTCTTCAA 562 ||||||||||||||| ||||||||| |||||||||||| ||||||||||| |||||||| Sbjct 854 ACACGGCTGTAGTAGAAGTTGCATCGAGGCTCTTGGCGTTATTTAAGGAAACTTCTTCAT 913 Query 563 CAGAACATTCTACTTACGGACTTGGCAATATTGTTTTAGTCGGAAACCGAGTCCGAATGG 622 ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 914 CAGAACATTCTACTTACGGGCTTGGGAATATTGTTTTAGTCGGAAACCGAGTCCGAATGG 973 Query 623 GGATAGACGAAAGGGGGAATGATGATCTCCTCAACGTGTTTCTTGATGATCGCATTAGTA 682 |||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct 974 GGATAGACGACAGGGGGAATGATGATCTCCTCAACGTGTTTCTTGAACATCGAATTAGTA 1033 Query 683 AATTGGGTGAACTGTTTTCGCCATCGAATGAATGGGAACGGAGTTTGGAGGCAGTCATAG 742 | ||| || |||||||||||||||||| || ||||||||||||||||||| || |||| | Sbjct 1034 AGTTGCGTAAACTGTTTTCGCCATCGACTGGATGGGAACGGAGTTTGGAGTCAATCATCG 1093 Query 743 ATATTCTTGAAAATGCTGAATCTAGTTATAAGAAATATCTGTTGCTAAGTGAAAGGAA-G 801 |||||||||| ||| | || |||| ||||||||||||||| ||| ||| ||||| ||| | Sbjct 1094 ATATTCTTGAGAATTCGGAGTCTAATTATAAGAAATATCTCTTGTTAAATGAAA-GAAGG 1152 Query 802 GAGAATCAA-GAA-A--CTAAAAACATTCTGACAGCATTTGGAGAGTTTGTAATGAAAAT 857 ||| || || ||| | |||||||||||| ||| ||||||||||||||||||||||||| Sbjct 1153 GAG-ATTAAGGAAGATGGTAAAAACATTCTTACAACATTTGGAGAGTTTGTAATGAAAAT 1211 Query 858 GTTTCTTGGCTCGAAAG-AA-A-C--A-CCGG-AGAAG--G--AAG-AAGAAATCATTCT 905 |||||||||||| |||| || | | | || ||||| | ||| |||||| ||||| Sbjct 1212 GTTTCTTGGCTCAAAAGAAAGATCGGAGAAGGAAGAAGCTGAAAAGAAAGAAAAGATTCT 1271 Query 906 TACATTTGGGGAGTTTGTAATGGAAAAATT--TGATGGGTTAAGTGAAACAATGAAGAAG 963 |||||||||||||||||||| |||||||| | |||||||||||||||||||| |||| Sbjct 1272 TACATTTGGGGAGTTTGTAA-AGAAAAATTACT-ATGGGTTAAGTGAAACAATGGGGAAG 1329 Query 964 ATCCAGAAGGATATGGTGGATTTGTATACACATCTGCCTAAGTCCTTT-CTATCGTCTAA 1022 ||||||||||||||||||||||||| |||||||| || ||||| ||| | ||| ||||| Sbjct 1330 GTCCAGAAGGATATGGTGGATTTGTACACACATCTTCCCAAGTCTTTTAC-ATCATCTAA 1388 Query 1023 CGATGTGAAGAATATGATCGTAGCCCGTCAAGCTCTTCGCCAAGCCAGAACTTTCTTGCA 1082 |||||||||||||||||||| ||||||| |||||||||||| ||||||| |||||||||| Sbjct 1389 CGATGTGAAGAATATGATCGCAGCCCGTAAAGCTCTTCGCCGAGCCAGATCTTTCTTGCA 1448 Query 1083 GGAGAAACAAGGAAGCTTCACATTTGATTGCTTCAACAAATTTGTCTGTGTTGATTGCCT 1142 |||||||||||||||||||||||| ||||||||||||||| | || || |||||||||| Sbjct 1449 GGAGAAACAAGGAAGCTTCACATTCGATTGCTTCAACAAAGTCATCAGTATTGATTGCCT 1508 Query 1143 TCGGACTCTACGTTTGCTATCAAAACGTTTTGAGATTCCAGCCTTGTTGATGAAGGAGGA 1202 || |||||||||||||||||||||||||||||||||||||||||||||| | || ||||| Sbjct 1509 TCAGACTCTACGTTTGCTATCAAAACGTTTTGAGATTCCAGCCTTGTTGGTAAACGAGGA 1568 Query 1203 TATAAGGACATTCTGCCTACAAAATGCACACATAATCTTTTGCACTGCCTCGGGTGCTGC 1262 || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1569 TACAAGGACATTCTGCCTACAAAATGCACACATAATCTTCTGCACTGCCTCGGGTGCTGC 1628 Query 1263 AGAAATGACCGCGGAACGGGCAGGGTCCATAG-ACATGCTTGTAGTTGACGAGGCGGCTC 1321 ||||||||||||||||||| |||||||||||| || | |||||||||||||||||||||| Sbjct 1629 AGAAATGACCGCGGAACGGACAGGGTCCATAGAAC-TTCTTGTAGTTGACGAGGCGGCTC 1687 Query 1322 AACTTAAAGAATGTGAATCAGTTGCTGCATTGCAACTTCAGGGTTTGCACCATGCTGTTC 1381 | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1688 AGCTTAAAGAATGTGAATCAGTTGCTGCATTGCAAATTCAGGGTTTGCACCATGCTGTTC 1747 Query 1382 TTATAGGAGATGAGCTTCAGCTACCAGCAATGGTGCAAAGCGAGGTATGTGAGAAGGCCA 1441 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1748 TAATAGGAGATGAGCTTCAGCTACCAGCAATGGTGCAAAGCGAGGTATGTGAGAAGGCCA 1807 Query 1442 AATTTGTGAGAAGCTTGTTTGAGAGATTGGATTCACTTGGCCATAAGAAACATTTGCTTA 1501 |||||| ||||||||||||||||||||||| || |||||||| |||||||||||||||| Sbjct 1808 AATTTGGGAGAAGCTTGTTTGAGAGATTGGTTTTGCTTGGCCACAAGAAACATTTGCTTA 1867 Query 1502 ATGTTCAATACCGTATGCATCCCTCTATAAGTCTTTTCCCCAACATGGAGTTTTATGGTG 1561 |||||||||| ||||||||| | |||||||| ||||||||||||||||||||||||| || Sbjct 1868 ATGTTCAATATCGTATGCATACTTCTATAAGCCTTTTCCCCAACATGGAGTTTTATGATG 1927 Query 1562 GGAAGATCTCTGATGCTGAGATTGTTAAAGAAAGCACCTATCAAAAGAGGTTTCTTCAAG 1621 | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 1928 GTAAGATCTCTGATGCTGAGATTGTTAAAGAAAGCACCTATCAAAAGCGGTTTCTTCGAG 1987 Query 1622 GAAACATGTTTGGCTCTTTTTCGTTCATCAATGTAGGACTTGGGAAAGAAGAGTTTGGTG 1681 ||||||||||||| ||||| || || ||||| || ||||||||||||||||||||||||| Sbjct 1988 GAAACATGTTTGGTTCTTTCTCCTTTATCAACGTGGGACTTGGGAAAGAAGAGTTTGGTG 2047 Query 1682 ATGGACATAGTCCTAAGAATATGGTTGAGATTGCAGTAGTTTCTGAGATCTTAACCAATC 1741 ||||||| |||||||| || ||||||||| |||| || ||||||||||||||| |||||| Sbjct 2048 ATGGACACAGTCCTAAAAACATGGTTGAGGTTGCTGTGGTTTCTGAGATCTTATCCAATC 2107 Query 1742 TTCTCAAAGTGTCAAGTGAGACAAAGACGAAGATGAGTGTTGGTGTTATTTCACCTTATA 1801 ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2108 TTCTCAAAGTGTCCAGTGAGGCAAAGACGAAGATGAGTGTTGGTGTTATTTCACCTTATA 2167 Query 1802 AAGCTCAAGTTAGTGCAATCCAAGAGAGAATCGGAGATAAGTACACCTCCGTATCAGATA 1861 ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2168 AAGCTCAAGTTAGAGCAATCCAAGAGAGGATCGGAGATAAGTACACCTCCGTATCAGATC 2227 Query 1862 ACCTTTTCACTTTGAATGTCCGGTCGGTGGATGGGTTTCAAGGAGGAGAAGAAGACATCA 1921 | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct 2228 AGCTTTTCACTTTGAATGTTCGGTCCGTGGATGGGTTTCAAGGAGGAGAAGAAGATATCA 2287 Query 1922 TTATCATATCCACCGTTAGAAGCAACTGTAACGGAAACATAGGGTTCCTCTCTAACCGTC 1981 ||||||||||||||||||||| |||| |||||||| |||||||||| ||||||||||||| Sbjct 2288 TTATCATATCCACCGTTAGAAACAACGGTAACGGACACATAGGGTTTCTCTCTAACCGTC 2347 Query 1982 AAAGAGCCAACGTTGCACTGACTCGTGCAAGGCACTGTTTATGGGTGATTGGGAACGAGA 2041 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2348 AAAGAGCCAACGTTGCACTGACTCGTGCAAGGCACTGTTTATGGGTGATTGGGAACGAGA 2407 Query 2042 GAACTTTGTCGCTGAGTGGTTCGATT 2067 |||||||||||||||||||||||||| Sbjct 2408 GAACTTTGTCGCTGAGTGGTTCGATT 2433 > Ahg947346 jgi|Araly1|947346|scaffold_703575.1 Length=2500 Score = 763 bits (413), Expect = 0.0 Identities = 901/1132 (80%), Gaps = 51/1132 (5%) Strand=Plus/Plus Query 968 AGAAGGATATGGTGGATTTGTATACACATCTGCCTAAGTCCTTT-CTATCGTCTAACGAT 1026 |||| |||||||| ||||||| || ||||||||||||| |||| | |||||||| ||| Sbjct 1207 AGAAAGATATGGTTGATTTGTGCACCCATCTGCCTAAGT-CTTTGATCTCGTCTAATGAT 1265 Query 1027 GTGAAGAATATGATCGTAGCCCGTCAAGCTCTTCGCCAAGCCAGA-ACTTTCTTGCAGGA 1085 |||||||| ||||| | ||| || |||||||||| || | ||| | ||||||||| || Sbjct 1266 GTGAAGAAAATGATAGAAGCTCGCCAAGCTCTTCACCGTGTTAGATA-TTTCTTGCAAGA 1324 Query 1086 GAA----AC-AAGGAAGCTT-C-ACATTTGATTGCTTCAACAA-ATTTGTCTGTGTTGAT 1137 ||| | | | | || | | | || | ||||| || | | || |||||||| Sbjct 1325 GAATTCTTCTACGTTTGATTCCAAGAAGGGA-AGTTTCAA-AAGAATCATCAGTGTTGAT 1382 Query 1138 TGCCTTCGGA-CTCTACGTTTGCTATCAAAACGTTTTGAGATTCCAGCCTTG-TTG---A 1192 ||| ||| | || || ||||| || | ||||| ||| || |||||| ||| ||| | Sbjct 1383 TGCATTC-AAGCTTTAAGTTTGATACCGAAACGATTTAAGGTTCCAGAATTGTTTGAAAA 1441 Query 1193 TGAAGGAGGATATAAGGACATTCTGCCTACAAAATGCACACATAATCTTTTGCACTGCCT 1252 |||| || ||||| |||| |||||| |||||||| || | |||||||| || || |||| Sbjct 1442 TGAA-GAAGATATTAGGAAATTCTGTCTACAAAACGCGGATATAATCTTCTGTACAGCCT 1500 Query 1253 CGGGTGCTGCAGAAATGACCGCG-GAACGGGCAGGGTCCATAGACA-TGCTTGTAGTTGA 1310 | |||||||||||||||| | | ||| || |||| |||| | | ||||| ||||| Sbjct 1501 CAGGTGCTGCAGAAATGAATG-GTGAAAGGACAGGAAATGTAGA-ATTTCTTGTGGTTGA 1558 Query 1311 CGAGGCGGCTCAACTTAAAGAATGTGAATCAGTTGCTGCATTGCAACTTCAGGGTTTGCA 1370 |||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 1559 CGAGGCGGCTCAGCTTAAGGAATGTGAATCAGTTGCTGCATTGCAACTTCAGGGACTGCG 1618 Query 1371 CCATGCTGTTCTTA-TAGGAGATGAGCTTCAGCTACCAGCAATGGTGCA-AAGCGAGGTA 1428 ||||||||||| | ||||||||||| ||||| |||| |||||||| || || ||| | | Sbjct 1619 TCATGCTGTTCT-ACTAGGAGATGAGTTTCAGTTACCTGCAATGGTTCATAA-CGATGAA 1676 Query 1429 TGTGAGAAGGCCAAATTTGTGA-GAAGCTTGTTTGAGAGATTGGATT-CACTTGGCCATA 1486 || || ||||| ||||| | || ||||||||||||||||||||| || ||||||| |||| Sbjct 1677 TGCGAAAAGGCGAAATTCG-GAAGAAGCTTGTTTGAGAGATTGG-TTACACTTGGTCATA 1734 Query 1487 AG-AAACATTTGCTTAATGTTCAATACCGTATGCATCCCT-CTATAAGTCTTTTCCCCAA 1544 | ||||| |||||| |||||||||| || ||||| |||| | || | | |||||| || Sbjct 1735 -GCAAACACTTGCTTGATGTTCAATATCGAATGCA-CCCTTCGATTATTAGTTTCCCTAA 1792 Query 1545 CATGGAGTTTTATGGTGGGAAGA-TCTCTGATGCTGAGATTGTTAAAGAAAGCACCTATC 1603 | ||||| |||||||||| || || ||||||| | |||| ||||||||| || | Sbjct 1793 TAAAGAGTTCTATGGTGGGA-GAATCAAAGATGCTGCTAATGTTCAAGAAAGCATTTA-C 1850 Query 1604 -AAAAGAGGTTTCTTCAAGGAAACATGTTTGGCTCTTTTTCGTTCATCAATGTAGGACTT 1662 ||||| | | |||||||||||||||||||||||| || ||||| ||||||||||| | | Sbjct 1851 GAAAAGCGATATCTTCAAGGAAACATGTTTGGCTCCTTCTCGTTTATCAATGTAGGTCAT 1910 Query 1663 GGGAAAGAAGAGTTTGGTGATGGACATAGTCCTAAGAATATGGTTGA-GATTGCAGT-AG 1720 || |||||||||||||||||||| |||||||| ||||| |||||||| | |||| || | Sbjct 1911 GGAAAAGAAGAGTTTGGTGATGGGCATAGTCCCAAGAACATGGTTGAAG-TTGCTGTGA- 1968 Query 1721 TTTCTGAGATCTTAACCAATCTTCTCAAAGTGTCAAGTGAGACAAAGACGAAGATGAGTG 1780 ||||||| ||| || | |||||| ||||||| |||||||| | ||||| || ||||||| Sbjct 1969 TTTCTGAAATCCTATCAAATCTTTTCAAAGTTTCAAGTGAAAGAAAGATTAATATGAGTG 2028 Query 1781 TTGGTGTTATTTCACCTTATAAAGCTCAAGTTAGTGCAATCCAAGAGAGAATCGGAGATA 1840 |||| || ||| |||||||||||| ||||| || ||||||||||| |||||| ||||| Sbjct 2029 TTGGAGTGATTACACCTTATAAAGGACAAGTGAGAGCAATCCAAGACAGAATCATAGATA 2088 Query 1841 AGTACACCTCCGTATCAGATAACCTTTTCACTTTGAATGTCCGGTCGGTGGATGGGTTTC 1900 |||||| ||| |||||| | | |||||||| |||||||| |||||||| |||||||||| Sbjct 2089 AGTACAGTTCCTTATCAGGTGAGCTTTTCACATTGAATGTTCGGTCGGTAGATGGGTTTC 2148 Query 1901 AAGGAGGAGAAGAAGACATCATTATCATATCCACCGTTAGAAGCAACTGTAAC-GGAAAC 1959 |||| || |||||||| | || ||||| |||||||||||||| ||||||||| |||| Sbjct 2149 AAGGTGGTGAAGAAGATGTTATCATCATCTCCACCGTTAGAAGTAACTGTAACAGGAAGG 2208 Query 1960 ATAGGGTTCCTCTCTAACCGTCAAAGAGCCAACGTTGCACTGACTCGTGCAAGGCACTGT 2019 | || || ||| ||||||||||||||||||||| || || ||||| || || |||||| Sbjct 2209 TT-GGATTTCTCAGTAACCGTCAAAGAGCCAACGTGGCGCTCACTCGAGCTAGACACTGT 2267 Query 2020 TTATGGGTGATTGGGAACGAGAGAACTTT-G-TCGCTGAGTGGTTCGATTTG 2069 |||||||||||||| || |||| ||| | | ||| ||||||||| ||||| Sbjct 2268 TTATGGGTGATTGGAAATGAGACAACACTAGCTCG--GAGTGGTTCAATTTG 2317 > Ahg891304 jgi|Araly1|891304|Al_scaffold_0007_3290 Length=2457 Score = 752 bits (407), Expect = 0.0 Identities = 798/985 (81%), Gaps = 34/985 (3%) Strand=Plus/Plus Query 1099 TTCACATTTGATTGCTTCAACAAATTTGTCTGTGTTGATTGCCTTCGGACTCTACGTTTG 1158 |||| |||||||||||| | ||| || ||| ||||||| ||| |||||||||||| Sbjct 1330 TTCAAATTTGATTGCTT-TA-AAA-GAATCAGTGCTGATTGCGTTCAGACTCTACGTTTA 1386 Query 1159 CTAT-CAAAACGTTTTGAGATTCCAGCCTTGTT-GATGAAGGAGGATATAAGGACATTCT 1216 || | | |||||||||||||| ||| |||||| || || | |||| || ||||| | Sbjct 1387 CT-TCCGCAACGTTTTGAGATTTCAGACTTGTTGGA-AAACAAAGATACAAAAACATTTT 1444 Query 1217 GCCTACAAAATGCACACATAATCTTTTGCACTGCCTCGGGTGCTGCAGAAATG-A-CCGC 1274 | ||||| |||||| | |||||||| ||||| || || |||||||| || ||| | ||| Sbjct 1445 GTCTACAGAATGCAGATATAATCTTCTGCACAGCATCAGGTGCTGCGGATATGAATCCG- 1503 Query 1275 GGAACGGGCAGGGTCCATAGACATGCTTGTAGTTGACGAGGCGGCTCAACTTAAAGAATG 1334 | || || |||| || || ||| | ||||| ||||| ||||||||||| ||||||||||| Sbjct 1504 GTAA-GGACAGGATCGATCGACCTTCTTGTGGTTGATGAGGCGGCTCAGCTTAAAGAATG 1562 Query 1335 TGAATCAGTTGCTGCATTGCAAC-TTCAGGGTTTGCACCATGCTGTTCTTATAGGAGATG 1393 ||||||||||||||| ||||||| ||| || || | |||||||||||||||||||||| Sbjct 1563 TGAATCAGTTGCTGCTTTGCAACTTTCTGGACTT-CGTCATGCTGTTCTTATAGGAGATG 1621 Query 1394 AGCTTCAGCTACCAGCAATGGTGCAAAGCGAGGTATGTGAGAAGGCCAAATTTGTG-AGA 1452 |||||||| | || |||||| || || || ||||||| ||||| ||||| | | || Sbjct 1622 AGCTTCAGTTGCCTGCAATGATG--TGGC-AGATATGTGAAAAGGCAAAATTCG-GAAGC 1677 Query 1453 AGCTTGTTTGAGAGATTGGATTC-ACTTGGCCATAAGAAACATTTGCTTAATGTTCAATA 1511 || ||||| ||||| |||| ||| ||||| || || || |||||||||||||||||||| Sbjct 1678 AGTTTGTTCGAGAGGTTGG-TTCTGCTTGGTCACAACAAGCATTTGCTTAATGTTCAATA 1736 Query 1512 CCGTATGCATCCCTCTATAAGTCTTTTCCCCAACATGGAGTTTTATGGTGGGAAGATCTC 1571 ||| |||||||| || || |||| |||||| || | ||||| ||||||||||| ||| Sbjct 1737 CCGAATGCATCCTTCGATTAGTCGTTTCCCTAATAAAGAGTTCTATGGTGGGAAAATCAA 1796 Query 1572 TGATGCTGAGATTGTTAAAGAAAGCACCTATCAAAAGAGGTTTCTTCAAGGAAACATGTT 1631 ||||||| || |||| ||||||||| ||||||||||||||||||||||| |||||||| Sbjct 1797 AGATGCTGCGAATGTTCAAGAAAGCATTTATCAAAAGAGGTTTCTTCAAGGGAACATGTT 1856 Query 1632 TGGCTCTTTTTCGTTCATCAATGTAGGACTTGGGA-AAGAAGAGTTTGGTGATGGACATA 1690 ||| ||||| || || |||||||| |||||| ||| |||||||||||||||||||||||| Sbjct 1857 TGGTTCTTTCTCTTTTATCAATGTTGGACTT-GGAGAAGAAGAGTTTGGTGATGGACATA 1915 Query 1691 GTCCTAAGAATATGGTTGA-GATTGCAGT-AGTTTCTGAGATCTTAACCAATCTTCTCAA 1748 ||||||| || |||||||| | |||| || | ||||||| ||| || | |||||| |||| Sbjct 1916 GTCCTAAAAACATGGTTGAAG-TTGCTGTGA-TTTCTGAAATCATATCAAATCTTTTCAA 1973 Query 1749 AGTGTCAAGTGAGACAAAGACGAA-GATGAGTGTTGGTGTTATTTCACCTTATAAAGCTC 1807 ||| |||||||| | || || || |||||| ||||| || |||| || || |||| | Sbjct 1974 AGTTTCAAGTGAAAGAA-GAATAAAGATGAGCGTTGGAGTGGTTTCTCCATACAAAGGAC 2032 Query 1808 AAGTTAGTGCAATCCAAGAGAGAATCGGAGATAAGTACACCTCCGTATCAGATAACCTTT 1867 |||| || |||||||||||||||| | | ||||||||| ||| |||||| | | |||| Sbjct 2033 AAGTCAGAGCAATCCAAGAGAGAACCAAAAATAAGTACAGCTCTTTATCAGGTGAGCTTT 2092 Query 1868 TCACTTTGAATGTCCGGTCGGTGGATGGGTTTCAAGGAGGAGAAGAAGACATCATTATCA 1927 ||||||||||||| |||||||| |||||||||||||| || |||||||| | || |||| Sbjct 2093 TCACTTTGAATGTTCGGTCGGTAGATGGGTTTCAAGGTGGGGAAGAAGATGTTATCATCA 2152 Query 1928 TATCCACCGTTAGAAGCAACTGTAACGGAAACA-TAGGG-TTCCTCT-CTAACCGTCAAA 1984 | || ||||||||||| ||| |||| ||||| | | ||| || ||| | |||||||||| Sbjct 2153 TCTCTACCGTTAGAAGTAACGGTAATGGAAA-AGT-GGGATTTCTCAAC-AACCGTCAAA 2209 Query 1985 GAGCCAACGTTGCACTGACTCGTGCAAGGCACTGTTTATGGGTGATTGGGAACGAGAGAA 2044 ||||||| || ||||| ||||| |||||||| |||||||||||| |||| || |||| || Sbjct 2210 GAGCCAATGTGGCACTTACTCGAGCAAGGCATTGTTTATGGGTGGTTGGTAATGAGACAA 2269 Query 2045 CTTTGTCGCTGAGTGGTTCGATTTG 2069 ||||| | || |||||||||||||| Sbjct 2270 CTTTGGCTCTAAGTGGTTCGATTTG 2294 > Ahg493692 jgi|Araly1|493692|fgenesh2_kg.7__3125__AT5G37160.1 Length=2604 Score = 691 bits (374), Expect = 0.0 Identities = 897/1141 (79%), Gaps = 69/1141 (6%) Strand=Plus/Plus Query 974 ATATGGTGGATTTGTATACACATCTGCCTAAGTCCTTTC-TATCGTCTAACGATGTGAAG 1032 ||||||| ||||||| || ||||| ||||||| ||||| | || ||||| ||||||||| Sbjct 1325 ATATGGTTGATTTGTGCACTCATCTACCTAAGT-CTTTCATTTCATCTAAAGATGTGAAG 1383 Query 1033 AATATGATCGTAGCCCGTCAAGCTCTTCGCCAAGCCAGA-ACTTTCTTGCAGGAGAA--- 1088 |||||||| | |||||| ||||| |||| || | ||| | ||||||||||||||| Sbjct 1384 AATATGATAGCAGCCCGCCAAGCGCTTCACCGTGTTAGAGA-TTTCTTGCAGGAGAATTC 1442 Query 1089 A-CAAG-GAAG-CTTC---ACA------TTT-G-----ATTGCTTCAACAAATTTGTCTG 1130 | | || || | ||| | | ||| | ||||||| |||||| | || | Sbjct 1443 ATCTAGAGATGATTTCAAGAAAGGTGGTTTTAGATTCAATTGCTTTAACAAACTCATCAG 1502 Query 1131 TGTTGATTGCCT-TCG-GACTCTACGTTTGCTAT-CAAAACGTTTTGAGATTCCAGCCTT 1187 |||||| || || | | | ||||| || | || | ||||| |||||| |||| | ||| Sbjct 1503 TGTTGA-TG-CTATTGAGGCTCTATGTCTACT-TCCAAAATGTTTTGGGATTTTTGGCTT 1559 Query 1188 -GTTGATGAAGGAGGATATAAGGACATTCTGCCTACAAAATGCACACATAATCTTTTGCA 1246 | || | || ||||| |||| ||| || |||||||||||| | |||||| | |||| Sbjct 1560 AGAAAAT-TATGAAGATATCAGGAAATTTTGTCTACAAAATGCAGATATAATCCTCTGCA 1618 Query 1247 CTGCCTCGGGTGCT-G-CAGAAAT-GACCGCGGAACGGGCAGGGTCCATAGACATGCTTG 1303 | ||||| ||| | | || | || | | ||||| || ||| || | ||| | || | Sbjct 1619 CAGCCTCAAGTG-TGGCCA-ATATGGTTC-CGGAAAGGATAGGCTCTGTCGACCTTCTCG 1675 Query 1304 TAGTTGACGAGGCGGCTCAACTTAAAGAATGTGAATCAGTTGCTGCATTGCAACTT-CAG 1362 | || || ||||| ||||| ||||||||||||||||||||| | |||||||||||| | | Sbjct 1676 TGGTCGATGAGGCAGCTCAGCTTAAAGAATGTGAATCAGTTACCGCATTGCAACTTCCTG 1735 Query 1363 GGTTTGCACCATGCTG-TTCTTATAGGAGATGAGCT-TCAGCTACCAGCAATGGTGCAAA 1420 | || | ||||| | |||| |||||||||||| | |||| |||| |||||||| || | Sbjct 1736 GACTT-CGTCATGC-GCTTCTAATAGGAGATGAG-TATCAGTTACCTGCAATGGTTCACA 1792 Query 1421 GCGAGGTATGTGAGAAGGCCAAATTTGTG-AGAAGCTTGTTTGAGAGATTGG-ATTCACT 1478 || ||| ||| || ||||| ||||| | | ||||||||||| |||||||||| || | | Sbjct 1793 GCAAGGAATGCGAAAAGGCGAAATTCG-GAAGAAGCTTGTTCGAGAGATTGGTTTTGA-T 1850 Query 1479 TGGCCATAAGAAACATTTGCTTAATGTTCAATACCGTATGCATCCCTCTATAAGTCT-TT 1537 ||| ||||| ||||||||||| ||||||||||| || |||||||| || || ||| | || Sbjct 1851 TGGTCATAACAAACATTTGCTAAATGTTCAATATCGGATGCATCCTTCGATTAGT-TGTT 1909 Query 1538 TCCCCAACATGGAGTTTTATGGTGGGAAG-ATCTCTGATGC-TGAGATTGTTAAAGAAAG 1595 |||| || | ||||||||||| |||| || ||| ||||||| | ||||||| ||||| | Sbjct 1910 TCCCTAATAAGGAGTTTTATGATGGG-AGAATCACTGATGCAT-CGATTGTTCAAGAACG 1967 Query 1596 CACCTATC-AAAAGAGGTTTCTTCAAGGAAACATGTTTGGCTCTTTTTCGTTCATCAATG 1654 || || | ||||| |||||||||| ||||| |||||||| ||||| || || ||||||| Sbjct 1968 CATTTA-CGAAAAGCGGTTTCTTCAGGGAAAAATGTTTGGTTCTTTCTCTTTTATCAATG 2026 Query 1655 TAGGACTTGGGAAAGAAGAGTTTGGTGATGGACATAGTCCTAAGAATATGGTTG-AGATT 1713 | |||| |||||||||||||||| |||||||||||||||||||||||||||||| || || Sbjct 2027 TGGGACGTGGGAAAGAAGAGTTTTGTGATGGACATAGTCCTAAGAATATGGTTGAAG-TT 2085 Query 1714 GCAGT-AGTTTCTGAGATCTTAACCAATCTTCTCAAAGTGTCAAG--TGAGACAAAGACG 1770 || || | |||| || ||| || |||||||| ||||||| ||||| | ||| || | | Sbjct 2086 GCTGTCA-TTTCCGAAATCATATCCAATCTTTTCAAAGTTTCAAGTCTAAGA-AACCA-G 2142 Query 1771 AAGATGAGTGTTGGTGTTATTTCACCTTATAAAGCTCAAGTTAGTGCAATCCAAGAGAGA 1830 |||||||||||||| || ||||||||||| || | ||||| || || |||||||||||| Sbjct 2143 AAGATGAGTGTTGGAGTGATTTCACCTTACAAGGGACAAGTGAGAGCTATCCAAGAGAGA 2202 Query 1831 ATCGGAGATAAGTACACCTCCGTATCAGATAACCTTTTCACTTTGAATGTCCGGTCGGTG 1890 || || ||||||||| ||| |||||| | | ||||||||||||||||| | ||||| Sbjct 2203 ATTGGTGATAAGTACGGTTCCTTATCAGGTCAGCTTTTCACTTTGAATGTTCAATCGGTA 2262 Query 1891 GATGGGTTTCAAGGAGGAGAAGAAGACATCATTATCATATCCACCGTTAGAAGCAACTGT 1950 ||||||||||||||||||||||||||||| || ||||| || ||||||||||| ||| || Sbjct 2263 GATGGGTTTCAAGGAGGAGAAGAAGACATTATCATCATCTCTACCGTTAGAAGTAAC-GT 2321 Query 1951 -AACGGAAACATAGGG-TTCCTCTCTAACCGTCAAAGAGCCAACGTTGCACTGACTCGTG 2008 || |||||| | ||| || || ||||| |||||||||||| || ||||||||||||| Sbjct 2322 TAATGGAAACGT-GGGATTTCTAAGTAACCATCAAAGAGCCAATGTGGCACTGACTCGTG 2380 Query 2009 CAAGGCACTGTTTATGGGTGATTGGGAACGAGAGAACTTTGTCGCTGAGTGGTTCGATTT 2068 |||| || ||||||||||||||||| ||||||| |||||| | || ||||||||||||| Sbjct 2381 CAAGACATTGTTTATGGGTGATTGGTAACGAGACCACTTTGGCTCTAAGTGGTTCGATTT 2440 Query 2069 G 2069 | Sbjct 2441 G 2441 > Ahg355656 jgi|Araly1|355656|fgenesh1_pg.C_scaffold_7002829 Length=2487 Score = 667 bits (361), Expect = 0.0 Identities = 667/813 (82%), Gaps = 27/813 (3%) Strand=Plus/Plus Query 1087 AAACAAGGAAGCTTCACATTTGATTGCTTCAACAA-ATTTGTCTGTGTTGATTGCCTT-C 1144 ||| |||||| |||| ||||||||||||||| || | | || |||||||||||||| | Sbjct 1417 AAAGAAGGAAATTTCAAATTTGATTGCTTCAA-AAGACTCATCAGTGTTGATTGCCTTGC 1475 Query 1145 GGACTCTACGTTTGCTAT-CAAAACGTTTTGAGATTCCAGCCTTGTT-GATGAAGGAGGA 1202 || |||||||||| || | |||||||||||||||| || | | |||| || || || || Sbjct 1476 GG-CTCTACGTTTACT-TCCAAAACGTTTTGAGATACCGGACATGTTGGA-AAACGAAGA 1532 Query 1203 TATAAGGACATTCTGCCTACAAAATGCACACATAATCTTTTGCACTGCCTCGGGTGCTGC 1262 ||| |||| ||| ||||||||||| || || |||||| | ||||| || || |||||||| Sbjct 1533 TATTAGGAAATTTTGCCTACAAAACGCGCATATAATCCTCTGCACGGCTTCTGGTGCTGC 1592 Query 1263 AGAAATG-ACCGCGGAACGGGCAGGGTCCATAG-ACATGCTTGTAGTTGACGAGGCGGCT 1320 |||||| | | ||||| || |||| |||| || | ||||| ||||| ||||| ||| Sbjct 1593 TGAAATGAATC-CGGAAAGGACAGGAAATATAGAAC-TTCTTGTGGTTGATGAGGCCGCT 1650 Query 1321 CAACTTAAAGAATGTGAATCAGTTGCTGCATTGCAACTTCAGGGTTTGCACCATGCTGTT 1380 || ||||| |||||||||||||||||||||||||||||| |||| |||| || || || Sbjct 1651 CAGCTTAAGGAATGTGAATCAGTTGCTGCATTGCAACTTAAGGGACTGCATCACGCCATT 1710 Query 1381 CTT-ATAGGAGATGAGCTTCAGCTACCAGCAATGGTGCA-AAGCGAGGTATGTGAGAAGG 1438 || |||||||||||| |||| | || |||||||| || || ||| | ||||| |||| Sbjct 1711 -TTAATAGGAGATGAGTTTCAATTGCCTGCAATGGTACATAA-TGAGATGTGTGAAAAGG 1768 Query 1439 CCAAATTTGTG-AGAAGCTTGTTTGAGAGATTGGATTCACTTGGCCATAAGAAACATTTG 1497 | ||||| | | |||||||||||||| ||||||| || ||||| ||||| ||||||||| Sbjct 1769 CGAAATTCG-GAAGAAGCTTGTTTGAAAGATTGGTTTTGCTTGGTCATAACAAACATTTG 1827 Query 1498 CTTAATGTTCAATACCGTATGCATCCCTCTATAAGTCTTTTCCCCAACATGGAGTTTTAT 1557 ||| |||||||||| || |||||||| || || |||| |||||| || | ||||| ||| Sbjct 1828 CTTGATGTTCAATATCGAATGCATCCTTCGATTAGTCGTTTCCCTAATAAAGAGTTCTAT 1887 Query 1558 GGTGGGAAG-ATCTCTGATGCTGAGATTGTTAAAGAAAGCACCTATCAAAAGAGGTTTCT 1616 |||||| || ||| ||||||| || |||| ||||||||| |||||||||||||||||| Sbjct 1888 GGTGGG-AGAATCAAAGATGCTGCGAATGTTCAAGAAAGCATCTATCAAAAGAGGTTTCT 1946 Query 1617 TCAAGGAAACATGTTTGGCTCTTTTTCGTTCATCAATGTAGGACTTGGGAAAGAAGAGTT 1676 |||||||||||||||||| || || || || |||||||| |||| ||| ||||| ||||| Sbjct 1947 TCAAGGAAACATGTTTGGTTCATTCTCCTTTATCAATGTTGGACGTGGAAAAGAGGAGTT 2006 Query 1677 TGGTGATGGACATAGTCCTAAGAATATGGTTGA-GATTGCAGT-AGTTTCTGAGATCTTA 1734 |||||||||||||||||| ||||| |||||||| | |||| || | ||||||| || || Sbjct 2007 TGGTGATGGACATAGTCCCAAGAACATGGTTGAAG-TTGCTGTCA-TTTCTGAAATAATA 2064 Query 1735 ACCAATCTTCTCAAAGTGTCAAGTGAGACAAAGACGAAGATGAGTGTTGGTGTTATTTCA 1794 |||||||| ||||||| |||||||| | || || ||||||||||||||| || ||||| Sbjct 2065 TCCAATCTTTTCAAAGTTTCAAGTGAAAGAAGGATGAAGATGAGTGTTGGAGTGGTTTCA 2124 Query 1795 CCTTATAAAGCTCAAGTTAGTGCAATCCAAGAGAGAATCGGAGATAAGTACACCTCCGTA 1854 |||||||||| ||||| || ||||||||||||||||||||||||||||||| ||| || Sbjct 2125 CCTTATAAAGGACAAGTGAGAGCAATCCAAGAGAGAATCGGAGATAAGTACAGTTCCTTA 2184 Query 1855 TCAGAT-AACCTTTTCAC-TTTGAATGTCCGGT 1885 |||| | ||| ||||||| ||||||||| |||| Sbjct 2185 TCAGGTCAAC-TTTTCACGTTTGAATGTTCGGT 2216 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 77856460780 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5