BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G06570.1
Length=2229
Score E
Sequences producing significant alignments: (Bits) Value
Ahg475855 jgi|Araly1|475855|fgenesh2_kg.2__985__AT4G06570.1 1744 0.0
Ahg481143 jgi|Araly1|481143|fgenesh2_kg.4__203__AT4G06570.1 1676 0.0
Ahg481446 jgi|Araly1|481446|fgenesh2_kg.4__506__AT4G05505.1 1548 0.0
Ahg497075 jgi|Araly1|497075|fgenesh2_kg.9__40__AT4G05505.1 1535 0.0
Ahg484611 jgi|Araly1|484611|fgenesh2_kg.5__603__AT4G05505.1 1520 0.0
Ahg935848 jgi|Araly1|935848|scaffold_500039.1 486 2e-136
> Ahg475855 jgi|Araly1|475855|fgenesh2_kg.2__985__AT4G06570.1
Length=1713
Score = 1744 bits (944), Expect = 0.0
Identities = 1237/1374 (90%), Gaps = 37/1374 (3%)
Strand=Plus/Plus
Query 846 AGTTGATTAGGTGAAGCGTTAATATTGAGTA----ATGTGTATATGCTAAGTTGATTAGG 901
||| |||||||| || |||||||||||||| |||||||||||||||| |||||||
Sbjct 367 AGTAGATTAGGTTTAGGGTTAATATTGAGTAGTGTGTGTGTATATGCTAAGTAGATTAGG 426
Query 902 TTTGTATATGGTAAGCTGAGTAGATTAGGTTTAGGGTTAATATTGAGTAATATGTGTGAG 961
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 427 TGTGTATATGGTAAGCTGAGTAGATTAGGTTTAGGGTTAATATTGAGTAATATGTGTGTG 486
Query 962 TTTATAGATGCTAATTGGTTTATGTAATTGTAGGTTTGGTCACGAAAATGGTAAGATGAC 1021
||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 487 TTTGTAGATGCTAATTGGTTTATGTAATTGTAGGTTTGGTCACGACGATGGTAAGCTGAC 546
Query 1022 CCAGAAGATCACAAAGGTATTTAAAAACAAGTTTGATGGGCCATATTACAGTTGGAGCTA 1081
| ||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||
Sbjct 547 CTAGAAGATCACAAAGGTATTCACAAACAAGTTTAATGGGCCATATTACAGTTGGAGCTG 606
Query 1082 TGTACCTACAG-AAAAAGACACAAATACTTCCTCGAATTCGCCGTAAATTAACTTTTATC 1140
||||||||| | |||||||||||||||||||||||||||||| |||||||||| | ||
Sbjct 607 TGTACCTACTGAAAAAAGACACAAATACTTCCTCGAATTCGCGGTAAATTAAC---T-TC 662
Query 1141 TCCTAGTAATCTCTTCTATTGTTTGTATCCATTTGGTTTGGTTTGGTTGTTTGATCACTA 1200
| || | | || |||||| ||||||||||||||||||||||||||||||
Sbjct 663 T-CT--T-A-----TC-------TGTATCTATTTGGTTTGGTTTGGTTGTTTGATCACTA 706
Query 1201 ACATCAAATTCTCCTCTTGTTTTATAGAAAACACACACTTGGCATCCATCACTGACTGGT 1260
|||||||| |||||||||||||| |||||||||||||| ||||||||||||||||| ||
Sbjct 707 ACATCAAACTCTCCTCTTGTTTTGTAGAAAACACACACATGGCATCCATCACTGACCAGT 766
Query 1261 GTAATTGTAGAAAAATTCTACAAAATATGTCAGCTGCGTATGAAGGACATGGTTTCTAAG 1320
||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 767 GTAATTGAAGAGAAATTCTACAAAATATGTGGGCTGCGTATGAAGGACATGGTTTCTAAG 826
Query 1321 GCTTGCGCAAAACAAACCAATGAGCTTCCACCATGGATTGAGAAGACATTGTGGAAGGAA 1380
|||||| |||||| | |||||||| || ||||||||||||||||||||||||||||||
Sbjct 827 GCTTGCTCAAAACGAGCCAATGAGAGACCGCCATGGATTGAGAAGACATTGTGGAAGGAA 886
Query 1381 ATGTGTGTGTATTGGGACACAGAAGAAGTCATTGCCAAGAGTTAAACCACATCCGCAAG- 1439
||||||| ||||| |||||||||||||| ||||||||||| || ||||||||| || ||
Sbjct 887 ATGTGTGAGTATTAGGACACAGAAGAAGCCATTGCCAAGATTTCAACCACATCAGC-AGC 945
Query 1440 TCGAATGTCTGACCGTAATGGTCTTGGCCCTCAAAAACATGTATCGGGGACAAAGTCTTT 1499
||||||||||||||||||||||||||| ||||| || ||| |||||||| ||||||||||
Sbjct 946 TCGAATGTCTGACCGTAATGGTCTTGGTCCTCACAAGCATTTATCGGGGTCAAAGTCTTT 1005
Query 1500 CTTACAAATCGAGTAAGAGATTGTAAGTTACATCAAGCACTCTTGTTTATTTA-TTAAGA 1558
||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 1006 CTTACAAATCGAGCAAGAGATGGTAAGTTACATCAAGCACTCTTGTTTATTTATTTAAGA 1065
Query 1559 ATCTGAATTGTTTTGTGAACAACATTTCAGGAAATTGAGCTGAGAAGACAACCTACTATT 1618
| |||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct 1066 TTTTGAATT-TTTTGTGAACAACATTTCAGGAAATTGAGCTGGGAAGACCACCTACTATT 1124
Query 1619 GTTGAGATATTCCTTAGGACTCATACCAAAAAAGATGGGAC-GTTGTTGACACGAAGATG 1677
| ||||||||||||||||||||||||||||||||||||||| ||||||| | |||| |
Sbjct 1125 GGTGAGATATTCCTTAGGACTCATACCAAAAAAGATGGGACTTTTGTTGATAGGAAGGCG 1184
Query 1678 CAAGAAATTCATGAGGCATATTTGTATG-ACAAGGAAGCTAAGTTGGTTCCCCTTGAGAA 1736
|| ||||||||||||||||||||| | | |||||||||||||||||| | ||||||||||
Sbjct 1185 CAGGAAATTCATGAGGCATATTTG-AAGAACAAGGAAGCTAAGTTGGCTGCCCTTGAGAA 1243
Query 1737 TGATGAAGGGTCTGATGGTACTTCCCGTCGATTAGAACTATCTCAAGAGGATGATGATGA 1796
||||||||||||||| ||||| |||||||||| |||||||||||||||||| ||||||||
Sbjct 1244 TGATGAAGGGTCTGACGGTACATCCCGTCGATCAGAACTATCTCAAGAGGAGGATGATGA 1303
Query 1797 GATTTTCCTTCAGGTAATGTGGTTAATACttttttttttAATTCACTTCCTTCATCTTTT 1856
||| |||||||| ||||||||| |||| || ||||||| ||||||||| ||||||||| |
Sbjct 1304 GATCTTCCTTCATGTAATGTGGCTAATCCTCTTTTTTTAAATTCACTTACTTCATCTTAT 1363
Query 1857 AAGAACTAATCCTCTTGTCTTTTGTTTGCATTCAACTGTCACAAACGAGAGAGAGGTATA 1916
||||||||||||||||||||||| |||||| | |||||||||||||||||||| ||||||
Sbjct 1364 AAGAACTAATCCTCTTGTCTTTT-TTTGCAGT-AACTGTCACAAACGAGAGAGGGGTATA 1421
Query 1917 CTTCGGAATGGGAAGCTTAGGGAGGTACATCAATGAGAAGCGGAAGTACCCATGAAACAC 1976
||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||
Sbjct 1422 CTTCGGAATGGGAAGCTTAGGGAGGTACATCAATGGGAAGCGGAAGTACCCAGGAAGCAG 1481
Query 1977 TTATGCTTTCACTTCCTTTGCAATCACAGTTTGAGGAAGTCAACCGCAAGATAGAAGAAC 2036
|| ||||||||||||||| ||| |||||| ||||||||| ||||||||||||||||||||
Sbjct 1482 TTCTGCTTTCACTTCCTT-GCAGTCACAGCTTGAGGAAGCCAACCGCAAGATAGAAGAAC 1540
Query 2037 AAGCGACTCTCCAATTACATCGTAAGGCAGAGGA-ATTGCGGGTAAAAGTTGAGCAAGCA 2095
|||| ||||||||| ||||||| |||||||| | ||||| ||| |||| ||||||||||
Sbjct 1541 AAGCAACTCTCCAAGCACATCGTGAGGCAGAG-ATATTGCCGGTGAAAGCTGAGCAAGCA 1599
Query 2096 GATATCAAGCGTGTTGCTAATAAGCAACAAACAGAGATCAAACACTTGAGGATGGTGAAG 2155
|| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 1600 GAGATCAAGCGTGTTGCTAATGAGCAACAAGCAGAGATCAAACACTTGAGGATGGTGAAG 1659
Query 2156 AAGTACTTGACAGAAACTAACCCCATGTTTCTCGAATTCCTCGAGTCTGCTGGT 2209
||||||||||| |||||| |||||| |||||||| ||||||||||||||||||
Sbjct 1660 AAGTACTTGACCGAAACTGACCCCAAGTTTCTCGTCTTCCTCGAGTCTGCTGGT 1713
Score = 104 bits (56), Expect = 3e-21
Identities = 68/73 (93%), Gaps = 3/73 (4%)
Strand=Plus/Plus
Query 889 TAAGTTGATTAGGTTTG-T-ATATGGTAAGCTGAGTAGATTAGGTTTAGGGTTAATATTG 946
||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||
Sbjct 335 TAAGTTGATTAGGTTTGCTAAT-TGGTAAGCTGAGTAGATTAGGTTTAGGGTTAATATTG 393
Query 947 AGTAATATGTGTG 959
|||| | ||||||
Sbjct 394 AGTAGTGTGTGTG 406
> Ahg481143 jgi|Araly1|481143|fgenesh2_kg.4__203__AT4G06570.1
Length=2008
Score = 1676 bits (907), Expect = 0.0
Identities = 1238/1390 (89%), Gaps = 53/1390 (4%)
Strand=Plus/Plus
Query 846 AGTTGATTAGGTGAAGCGTTAATATTGAGTAA------TGTGTATATGCTAAGTTGATTA 899
||| |||||||| || ||||||||||||||| ||||||| |||||||| |||||
Sbjct 642 AGTAGATTAGGTTTAGGGTTAATATTGAGTAATGTGTGTGTGTATCTGCTAAGTAGATTA 701
Query 900 GGTTTGTATATGGTAAGCTGAGTAGATTAGGTTTAGGGTTAATATTGAGTAATA--TGTG 957
||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 702 GGTGTGTATATGGTAAGCTGAGTATATTAGGTTTAGGGTTAATATTGAGTAATATGTGTG 761
Query 958 TG-A--GT----TTA-TAGATGCTAATTGGTTTATGTAATTGTAGGTTTGGTCACGAAAA 1009
|| | || | | ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 762 TGTATGGTAAGCTGAGTAGATGCTAATTGGTTTATGTAATTGTAGGTTTGGTCACGACAA 821
Query 1010 TGGTAAGATGACCCAGAAGATCACAAAGGTATTTAAAAACAAGTTTGATGGGCCATATTA 1069
||||||| |||||| |||||||||||||||||| | |||||||||| |||||||||||||
Sbjct 822 TGGTAAGCTGACCCGGAAGATCACAAAGGTATTCACAAACAAGTTTAATGGGCCATATTA 881
Query 1070 CAGTTGGAGCTATGTACCTACAGAAA-AAGACACAAATACTTCCTCGAATTCGCCGTAAA 1128
|| |||||| | ||||||||| |||| |||||||||||||||||||||||||| ||
Sbjct 882 CAATTGGAGTTGTGTACCTACTGAAAGAAGACACAAATACTTCCTCGAATTCG-CG---- 936
Query 1129 TTAACTTTTATCTCCTAGTAATCTCTTCTATTGTTTGTATCCATTTGGTTTGGTTTGGTT 1188
||| | | ||| |||||||||| |||||||||||||||||||||||||
Sbjct 937 GTAA-----A-----T--TAA---CTTCTATTGTCTGTATCCATTTGGTTTGGTTTGGTT 981
Query 1189 GTTTGATCACTAACATCAAATTCTCCTCTTGTTTTATAGAAAACACACACTTGGCATCCA 1248
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 982 GTTTGATCACTAACATCAAACTCTCCTCTTGTTTTATAGAAAACACACACATGGCATCCA 1041
Query 1249 TCACTGACTGGTGTAATTGTAGAAAAATTCTACAAAATATGTCAGCTGCGTATGAAGGAC 1308
|||||||| |||||||||| ||| ||||| ||||||||||||||||||||||||||||||
Sbjct 1042 TCACTGACCGGTGTAATTGAAGAGAAATTTTACAAAATATGTCAGCTGCGTATGAAGGAC 1101
Query 1309 ATGGTTTCTAAGGCTTGCGCAAAACAAACCAATGAGCTTCCACCATGGATTGAGAAGACA 1368
|||||||||||||||||| |||||| | ||| |||| || ||||||||||||||||||
Sbjct 1102 ATGGTTTCTAAGGCTTGCTCAAAACGAGCCACTGAGAGACCGCCATGGATTGAGAAGACA 1161
Query 1369 TTGTGGAAGGAAATGTGTGTGTATTGGGACACAGAAGAAGTCATTGCCAAGAGTTAAACC 1428
||||||||||||||||||| ||||| |||||||||||||| | |||||||||||| ||||
Sbjct 1162 TTGTGGAAGGAAATGTGTGAGTATTTGGACACAGAAGAAGCCCTTGCCAAGAGTTCAACC 1221
Query 1429 ACATCCGCAAG-TCGAATGTCTGACCGTAATGGTCTTGGCCCTCAAAAACATGTATCGGG 1487
||||| ||| | ||||||||||||||||||||||||||| ||||| || |||||||||||
Sbjct 1222 ACATCAGCA-GCTCGAATGTCTGACCGTAATGGTCTTGGTCCTCACAAGCATGTATCGGG 1280
Query 1488 GACAAAGTCTTTCTTACAAATCGAGTAAGAGATTGTAAGTTACATCAAGCACTCTTGTTT 1547
| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct 1281 GCCAAAGTCTTTCTTACAAATCGAGCAAGAGATGGTAAGTTACATCAAGCACTCTTGTTT 1340
Query 1548 ATTTATTAAGAATCTGAATTGTTTTGTGAACAACATTTCAGGAAATTGAGCTGAGAAGAC 1607
||||||||||||| | |||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 1341 ATTTATTAAGAATTTAAATTTTTTTGTGAACAACATTTCAGGAAATTGAGCTGGGAAGAC 1400
Query 1608 AACCTACTATTGTTGAGATATTCCTTAGGACTCATACCAAAAAAGATGGGACGTT--GTT 1665
||||||||||| |||||||||| ||||||||||||||||||||||||||| ||| |||
Sbjct 1401 CACCTACTATTGGTGAGATATTCATTAGGACTCATACCAAAAAAGATGGGA-GTTTTGTT 1459
Query 1666 GACACGAAGATGCAAGAAATTCATGAGGCATATTTGTATGA-CAAGGAAGCTAAGTTGGT 1724
|| | |||| ||| ||||||||||||||||||||| | || |||||||||||||||||
Sbjct 1460 GATAGGAAGGCGCAGGAAATTCATGAGGCATATTTGAA-GAACAAGGAAGCTAAGTTGGC 1518
Query 1725 TCCCCTTGAGAATGATGAAGGGTCTGATGGTACTTCCCGTCGATTAGAACTATCTCAAGA 1784
| |||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 1519 TGCCCTTGTGAATGATGAAGGGTCTGATGGTACATCCCGTCGATCAGAACTATCTCAAGA 1578
Query 1785 GGATGATGATGAGATTTTCCTTCAGGTAATGTGGTTAATACt-tttttttttA--ATT-- 1839
||| ||||||||||| ||||||| |||||||||||| || || |||||||||| |||
Sbjct 1579 GGAGGATGATGAGATCTTCCTTCTGGTAATGTGGTTGATCCTCTTTTTTTTTATTATTAT 1638
Query 1840 ---CACTTCCTTCATCTTTTAAGAACTAATCCTCTTGTCTTTTGTTTGCATTCAACTGTC 1896
||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct 1639 TATCACTTACTTCATCTTTTAAGAACTAATCCTCTTGTCTTTTTTTTGCAGTCAACTGTC 1698
Query 1897 ACAAACGAGAGAGAGGTATACTTCGGAATGGGAAGCTTAGGGAGGTACATCAATGAGAAG 1956
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1699 ACAAACGAGAGAGGGGTATACTTCGGAATGGGAAGCTTAGGGAGGTACATCAATGGGAAG 1758
Query 1957 CGGAAGTACCCATGAAACACTTATGCTTTCACTTCCTTTGCAATCACAGTTTGAGGAAGT 2016
||||||||||| ||| || || ||||||||||||||| ||| |||||| |||||||||
Sbjct 1759 AGGAAGTACCCAGGAAGCAGTTCTGCTTTCACTTCCTT-GCAGTCACAGCTTGAGGAAGC 1817
Query 2017 CAACCGCAAGATAGAAGAACAAGCGACTCTCCAATTACATCGTAAGGCAGAGGAATTGCG 2076
|||||||||||||||||||||||||| ||||||| |||||| ||||||||| ||||||
Sbjct 1818 CAACCGCAAGATAGAAGAACAAGCGAATCTCCAAGCACATCGGGAGGCAGAGGCATTGCG 1877
Query 2077 GGTAAAAGTTGAGCAAGCAGATATCAAGCGTGTTGCTAATAAGCAACAAACAGAGATCAA 2136
||| |||| |||||||||||| |||||||||||||||||| |||||||| ||||||||||
Sbjct 1878 GGTGAAAGCTGAGCAAGCAGAGATCAAGCGTGTTGCTAATGAGCAACAAGCAGAGATCAA 1937
Query 2137 ACACTTGAGGATGGTGAAGAAGTACTTGACAGAAACTAACCCCATGTTTCTCGAATTCCT 2196
|||||||||||||||||||||||||||||| |||||| |||||| |||||||| |||||
Sbjct 1938 ACACTTGAGGATGGTGAAGAAGTACTTGACCGAAACTGACCCCAAGTTTCTCGCCTTCCT 1997
Query 2197 CGAGTCTGCT 2206
||||||||||
Sbjct 1998 CGAGTCTGCT 2007
Score = 462 bits (250), Expect = 4e-129
Identities = 346/392 (88%), Gaps = 8/392 (2%)
Strand=Plus/Plus
Query 321 TCTCCTCGCAGATCTGGATCGACTCTGTTTCGAGCATCCGGCTCGACTCAACCTAGATCT 380
||||||||||||||||| ||||||| |||||||||||||| || |||||||||||||||
Sbjct 252 TCTCCTCGCAGATCTGGCTCGACTCCATTTCGAGCATCCGGATCTACTCAACCTAGATCT 311
Query 381 CGAGGATCTATTCATCATCTAGCCTCCACGTTGAAAC-A--A-TCTCCAGAGGCAGTTCA 436
|||||||| |||||| ||||||||||| ||| |||| | | ||||||| | | |||||
Sbjct 312 GGAGGATCTGTTCATCGTCTAGCCTCCAAGTTCAAACAATCAGTCTCCAGCGCCGGTTCA 371
Query 437 ACCTGAAGCCTCCAATCAGTCTCCAGCGGCGGTTCAACGAGAAGCATCCAATCCTCTACT 496
|| |||||||||||||||||||||||| |||||||||| ||||| || ||||||| ||
Sbjct 372 ACGGGAAGCCTCCAATCAGTCTCCAGCGCCGGTTCAACGGGAAGCCTCAAATCCTCCAC- 430
Query 497 TTAGG-AAGCGTCAAATCCTCCACCTCGAGTCTTTGTATCACATCACAGCTCTCAAGCTC 555
| || | |||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 431 CTCGGCAGGCGTCAAATCCTCCACCTCGAGCCTCTGTATCACATCACAGCTCTCAAGCTC 490
Query 556 AAAACTCACACGCGGAGGAAGATGAAGATGAGGAAGCTGAGTTTGAGGCTGATTTTGAAA 615
|||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 491 AAAACTCACATGCGGAAGAAGATGAAGATGAGGAAGCTGAGTTTGAGGCTGATTATGAAA 550
Query 616 GGGAATCAACTATCCCTGAAGATTTGCTTGCAACTCTATATGAGTTGCTTGC-CCAGCCA 674
||||||||||| |||||||||||| |||||| ||||| ||||||||||| | || ||||
Sbjct 551 GGGAATCAACTCTCCCTGAAGATTCGCTTGCCACTCTCCATGAGTTGCTT-CTCCGGCCA 609
Query 675 AGCCATGAGAAATATACAACGGTCATCTCTCC 706
| | |||||| ||||||||||||||||||||
Sbjct 610 GGACGTGAGAAGTATACAACGGTCATCTCTCC 641
Score = 69.4 bits (37), Expect = 1e-10
Identities = 39/40 (98%), Gaps = 0/40 (0%)
Strand=Plus/Plus
Query 920 AGTAGATTAGGTTTAGGGTTAATATTGAGTAATATGTGTG 959
||||||||||||||||||||||||||||||||| ||||||
Sbjct 642 AGTAGATTAGGTTTAGGGTTAATATTGAGTAATGTGTGTG 681
> Ahg481446 jgi|Araly1|481446|fgenesh2_kg.4__506__AT4G05505.1
Length=2055
Score = 1548 bits (838), Expect = 0.0
Identities = 1234/1411 (87%), Gaps = 84/1411 (6%)
Strand=Plus/Plus
Query 846 AGTTGATTAGGTGAAGCGTTAATATTGAGTAA------TGTGTATATGCTAAGTTGATTA 899
||| |||||||| || ||||||||||||||| ||||||| |||||||| |||||
Sbjct 679 AGTAGATTAGGTTTAGGGTTAATATTGAGTAATGTGTGTGTGTATCTGCTAAGTAGATTA 738
Query 900 GGTTTGTATATGGTAAGCTGAGTAGATTAGGTTTAGGGTTAATATTGAGTAATA--TGTG 957
||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 739 GGTGTGTATATGGTAAGCTGAGTATATTAGGTTTAGGGTTAATATTGAGTAATATGTGTG 798
Query 958 TG-A--GT----T---T--A-TAG-----A---TGCTAATTGGTTTATGTAATTGTAGGT 996
|| | || | | | ||| | |||||||||||||||||||||||||||
Sbjct 799 TGTATGGTAAGCTGAGTAGATTAGTATAAAGCTTGCTAATTGGTTTATGTAATTGTAGGT 858
Query 997 TTGGTCACGAAAATGGTAAGATGACCCAGAAGATCACAAAGGTATTTAAAAACAAGTTTG 1056
|||||||||| ||||||||| |||||| |||||||||||||||||| | ||||||||||
Sbjct 859 TTGGTCACGACAATGGTAAGCTGACCCGGAAGATCACAAAGGTATTCACAAACAAGTTTA 918
Query 1057 ATGGGCCATATTACAGTTGGAGCTATGTACCTACAGAAA-AAGACACAAATACTTCCTCG 1115
||||||||||||||| |||||||| ||||||||| |||| ||||||||||||||||||||
Sbjct 919 ATGGGCCATATTACAATTGGAGCTGTGTACCTACTGAAAGAAGACACAAATACTTCCTCG 978
Query 1116 AATTCGCCGTAAATTAACTTTTATCTCCTAGTAATCTCTTCTATTGTTTGTATCCATTTG 1175
|||||| || ||| | | ||| |||||||||| ||||||||||||
Sbjct 979 AATTCG-CG----GTAA-----A-----T--TAA---CTTCTATTGTCTGTATCCATTTG 1018
Query 1176 GTTTGGTTTGGTTGTTTGATCACTAACATCAAATTCTCCTCTTGTTTTATAGAAAACACA 1235
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 1019 GTTTGGTTTGGTTGTTTGATCACTAACATCAAACTCTCCTCTTGTTTTGTAGAAAACACA 1078
Query 1236 CACTTGGCATCCATCACTGACTGGTGTAATTGTAGAAAAATTCTACAAAATATGTCAGCT 1295
||| ||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||
Sbjct 1079 CACATGGCATCCATCACTGACCGGTGTAATTGAAGAGAAATTCTACAAAATATGTCAGCT 1138
Query 1296 GCGTATGAAGGACATGGTTTCTAAGGCTTGCGCAAAACAAACCAATGAGCTTCCACCATG 1355
||||||||||||||||||||||||||||||| |||||| | ||| |||| || |||||
Sbjct 1139 GCGTATGAAGGACATGGTTTCTAAGGCTTGCTCAAAACGAGCCACTGAGAGACCGCCATG 1198
Query 1356 GATTGAGAAGACATTGTGGAAGGAAATGTGTGTGTATTGGGACACAGAAGAAGTCA-TTG 1414
|||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||
Sbjct 1199 GATTGAGAAGACATTGTGGAAGGAAATGTGTGAGTATTGGGACACAGAAGAAG-CACTTG 1257
Query 1415 CCAAGAGTTAAACCACATCCGCAAG-TCGAATGTCTGACCGTAATGGTCTTGGCCCTCAA 1473
||||||||| ||||||||| ||| | ||||||||||||||||||||||||||| |||||
Sbjct 1258 CCAAGAGTTCAACCACATCAGCA-GCTCGAATGTCTGACCGTAATGGTCTTGGTCCTCAC 1316
Query 1474 AAACATGTATCGGGGACAAAGTCTTTCTTACAAATCGAGTAAGAGATTGTAAGTTACATC 1533
|| |||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 1317 AAGCATGTATCGGGGCCAAAGTCTTTCTTACAAATCGAGCAAGAGATGGTAAGTTACATC 1376
Query 1534 AAGCACTCTTGTTTATTTA--T--T----------AAGAATCTGAATTGTTTTGTGAACA 1579
||||||||||||||||||| | | |||||| |||||| |||||||||||
Sbjct 1377 AAGCACTCTTGTTTATTTACATAATGGTTTTCCTTAAGAATTTGAATTTTTTTGTGAACA 1436
Query 1580 ACATTTCAGGAAATTGAGCTGAGAAGACAACCTACTATTGTTGAGATATTCCTTAGGACT 1639
||||||||||||||||||||| |||||| ||||||||||| |||||||||| ||||||||
Sbjct 1437 ACATTTCAGGAAATTGAGCTGGGAAGACCACCTACTATTGGTGAGATATTCATTAGGACT 1496
Query 1640 CATACCAAAAAAGATGGGACGTT--GTTGACACGAAGATGCAAGAAATTCATGAGGCATA 1697
||||||||||||||||||| ||| ||||| | |||| ||| |||||||||||||||||
Sbjct 1497 CATACCAAAAAAGATGGGA-GTTTTGTTGATAGGAAGGCGCAGGAAATTCATGAGGCATA 1555
Query 1698 TTTGTATGA-CAAGGAAGCTAAGTTGGTTCCCCTTGAGAATGATGAAGGGTCTGATGGTA 1756
|||| | || ||||||||||||||||| | |||||| |||||||||||||||||||||||
Sbjct 1556 TTTGAA-GAACAAGGAAGCTAAGTTGGCTGCCCTTGTGAATGATGAAGGGTCTGATGGTA 1614
Query 1757 CTTCCCGTCGATTAGAACTATCTCAAGAGGATGATGATGAGATTTTCCTTCAGGTAATGT 1816
| |||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||
Sbjct 1615 CATCCCGTCGATCAGAACTATCTCAAGAGGAGGATGATGAGATCTTCCTTCTGGTAATGT 1674
Query 1817 GGTTAATACttttttttttAATTCACTTCCTTCATCTTTTAAGAACTAATCCTCTTGTCT 1876
|| | ||| || || | | ||||| |||||||||||||||||||||||||||||||
Sbjct 1675 --TT--T--TTTATTATT-A-T-CACTTACTTCATCTTTTAAGAACTAATCCTCTTGTCT 1725
Query 1877 TTTGTTT-GCATTCAACTGTCACAAACGAGAGAGAGGTATACTTCGGAATGGGAAGCTTA 1935
||| ||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1726 TTTTTTTTGCAGTCAACTGTCACAAACGAGAGAGGGGTATACTTCGGAATGGGAAGCTTA 1785
Query 1936 GGGAGGTACATCAATGAGAAGCGGAAGTACCCATGAAACACTTATGCTTTCACTTCCTTT 1995
|||||||||||||||| |||||||||| ||||| ||| || || |||||||||||||||
Sbjct 1786 GGGAGGTACATCAATGGGAAGCGGAAGCACCCAGGAAGCAGTTCTGCTTTCACTTCCTT- 1844
Query 1996 GCAATCACAGTTTGAGGAAGTCAACCGCAAGATAGAAGAACAAGCGACTCTCCAATTACA 2055
||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 1845 GCAGTCACAGCTTGAGGAAGCCAACCGCAAGATAGAAGAACAAGCGACTCTCCAAGCACA 1904
Query 2056 TCGTAAGGCAGAGGAATTGCGGGTAAAAGTTGAGCAAGCAGATATCAAGCGTGTTGCTAA 2115
||| ||||||||| ||||||||| |||| |||||||||||| |||||||||||||||||
Sbjct 1905 TCGGGAGGCAGAGGCATTGCGGGTGAAAGCTGAGCAAGCAGAGATCAAGCGTGTTGCTAA 1964
Query 2116 TAAGCAACAAACAGAGATCAAACACTTGAGGATGGTGAAGAAGTACTTGACAGAAACTAA 2175
| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct 1965 TGAGCAACAAGCAGAGATCAAACACTTGAGGATGGTGAAGAAGTACTTGACCGAAACTGA 2024
Query 2176 CCCCATGTTTCTCGAATTCCTCGAGTCTGCT 2206
||||| |||||||| || ||||||||||||
Sbjct 2025 CCCCAAGTTTCTCGCCTTTCTCGAGTCTGCT 2055
Score = 387 bits (209), Expect = 3e-106
Identities = 364/436 (83%), Gaps = 22/436 (5%)
Strand=Plus/Plus
Query 321 TCTCCTCGCAGATCTGGATCGACTCTGTTTCGAGCATCCGGCTCGACTCAACCTAGATCT 380
||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||||||||
Sbjct 268 TCTCCTCGCGGATCTGGCTCGACTCCATTTCGAGCATCCGGATCGACTCAACCTAGATCT 327
Query 381 CGAGGATCTATTCATCATCTAGCCTCCACG-TTGA-AA-CAATCTCCAGAGGCAGTTCAA 437
|||||||| || || | | | | || | || || ||||||| | | ||||||
Sbjct 328 GGAGGATCTCGTC-GGTTC-A-ACGGGAAGCTT-ACAATCAGTCTCCAGCGCCGGTTCAA 383
Query 438 CCTGAAGCCTCCAATCAGTCTCCAGCGGCGGTTCAA-CGAGAAGCATCCAATCCTCTACT 496
| |||||||||||||||||||||||| |||||||| || ||||| |||||||||| ||
Sbjct 384 CGGGAAGCCTCCAATCAGTCTCCAGCGCCGGTTCAACCG-GAAGCCTCCAATCCTCCAC- 441
Query 497 TTAGG-AAGCGTCAAATCCTCCACCTCGAGTCTTTGTATCACATCACAGCTCTCAAGCTC 555
| || | |||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 442 CTCGGCAGGCGTCAAATCCTCCACCTCGAGCCTCTGTATCACATCACAGCTCTCAAGCTC 501
Query 556 AAAACTCACACGCGGAGGAAGATGAAGATGAGGAAGCTGAGTTTGAGGCTGATTTTGAAA 615
|||||||||| ||||| |||||||||||||||||||||||| | |||||| |||||
Sbjct 502 AAAACTCACATGCGGAAGAAGATGAAGATGAGGAAGCTGAG---G---CTGATTATGAAA 555
Query 616 GGGAATCAACTATCCCTGAAGATTTGCTTGCAACTCTATATGAGTTGCTTGCC-CAGCCA 674
||||||||||| |||||||||||| |||||| ||||| ||||||||||| | ||||||
Sbjct 556 GGGAATCAACTCTCCCTGAAGATTCGCTTGCTACTCTCCATGAGTTGCTT-CTTCAGCCA 614
Query 675 AGCCATGAGAAATATACAACGGTCATCTCTCCTAAATT-GAGCCTCAAACTCTAT-GGTT 732
| | |||||| | |||||||||||||||||| | ||| |||||| ||| |||| |||
Sbjct 615 GGACGTGAGAAGTTTACAACGGTCATCTCTCCCACATTTGAGCCTGGAAC-CTATTGGTA 673
Query 733 AGCTGAGTATATTAGG 748
||||||||| ||||||
Sbjct 674 AGCTGAGTAGATTAGG 689
Score = 255 bits (138), Expect = 7e-67
Identities = 246/294 (84%), Gaps = 24/294 (8%)
Strand=Plus/Plus
Query 14 ATGAAGACTCGTGGTGG---AGGCAAGAGAGGAAAAGGAAGGGTATAGAAGATT--CCCC 68
||||||||||||||||| |||||||||||| || | ||| || ||||||| ||||
Sbjct 1 ATGAAGACTCGTGGTGGAAAAGGCAAGAGAGG--AA-G--GGG-ATCGAAGATTCCCCCC 54
Query 69 C-AAATAGACCCACTTCTTCCCA-CCAAAT-CGAGTTGAAAT-GAAGACCAAGGAGTTGA 124
| |||| |||||||||||||||| || | ||||||| ||| ||||||| ||||
Sbjct 55 CAAAATCGACCCACTTCTTCCCAGCC-TGTACGAGTTG-AATCGAAGACC------TTGA 106
Query 125 ATCGACGGCCCAGGGGGCTTCCCAGCCAATACGAGTTCACGCCGGCGAATCGTCAAGTCC 184
||||| | || ||||| ||||||||||| |||||||||||||||||||||||||||| ||
Sbjct 107 ATCGAAGACCTAGGGGTCTTCCCAGCCAGTACGAGTTCACGCCGGCGAATCGTCAAGCCC 166
Query 185 TGCTTCAAGATTCTGAACGAGATCTGATTGCACATCCTCCAACAAGTCAAACCGTGAGGG 244
|||||||||||||||| ||| | ||||||||| |||||||| ||| |||| | ||||
Sbjct 167 CACTTCAAGATTCTGAACAAGAGCCGATTGCACAACCTCCAACGGGTCCAACCATCAGGG 226
Query 245 ACTATCCTCCTCTGACGCAACTTT-CCAGTCAGGCGAAGGATCTCCTTGTGGAT 297
|||||||||||| ||||||||||| |||||||||||||||||||||| | ||||
Sbjct 227 ACTATCCTCCTCCGACGCAACTTTTCCAGTCAGGCGAAGGATCTCCTCGCGGAT 280
Score = 87.9 bits (47), Expect = 3e-16
Identities = 52/54 (96%), Gaps = 1/54 (2%)
Strand=Plus/Plus
Query 906 TATATGGTAAGCTGAGTAGATTAGGTTTAGGGTTAATATTGAGTAATATGTGTG 959
||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 666 TAT-TGGTAAGCTGAGTAGATTAGGTTTAGGGTTAATATTGAGTAATGTGTGTG 718
> Ahg497075 jgi|Araly1|497075|fgenesh2_kg.9__40__AT4G05505.1
Length=2060
Score = 1535 bits (831), Expect = 0.0
Identities = 1231/1410 (87%), Gaps = 83/1410 (6%)
Strand=Plus/Plus
Query 846 AGTTGATTAGGTGAAGCGTTAATATTGAGTAA------TGTGTATATGCTAAGTTGATTA 899
||| |||||||| || ||||||||||||||| ||||||| |||||||| |||||
Sbjct 685 AGTAGATTAGGTTTAGGGTTAATATTGAGTAATGTGTGTGTGTATCTGCTAAGTAGATTA 744
Query 900 GGTTTGTATATGGTAAGCTGAGTAGATTAGGTTTAGGGTTAATATTGAGT-A-A------ 951
||| |||||||||||||||||||| ||||||||||||||||||||||||| | |
Sbjct 745 GGTGTGTATATGGTAAGCTGAGTATATTAGGTTTAGGGTTAATATTGAGTAATATGTGTG 804
Query 952 --TAT-GT--G-T--G-AG--TT-TAT--AG-ATGCTAATTGGTTTATGTAATTGTAGGT 996
||| || | | | || || ||| || |||||||||||||||||||||||||||
Sbjct 805 TGTATGGTAAGCTGAGTAGATTTGTATAAAGCTTGCTAATTGGTTTATGTAATTGTAGGT 864
Query 997 TTGGTCACGAAAATGGTAAGATGACCCAGAAGATCACAAAGGTATTTAAAAACAAGTTTG 1056
|||||||||| ||||||||| |||||| |||||||||||||||||| | ||||||||||
Sbjct 865 TTGGTCACGACAATGGTAAGCTGACCCGGAAGATCACAAAGGTATTCACAAACAAGTTTA 924
Query 1057 ATGGGCCATATTACAGTTGGAGCTATGTACCTACAGAAA-AAGACACAAATACTTCCTCG 1115
|||| |||||||||| |||||||| ||||||||| |||| ||||||||||||||||||||
Sbjct 925 ATGGACCATATTACAATTGGAGCTGTGTACCTACTGAAAGAAGACACAAATACTTCCTCG 984
Query 1116 AATTCGCCGTAAATTAACTTTTATCTCCTAGTAATCTCTTCTATTGTTTGTATCCATTTG 1175
|||||| || ||| | | ||| |||||||||| ||||||||||||
Sbjct 985 AATTCG-CG----GTAA-----A-----T--TAA---CTTCTATTGTCTGTATCCATTTG 1024
Query 1176 GTTTGGTTTGGTTGTTTGATCACTAACATCAAATTCTCCTCTTGTTTTATAGAAAACACA 1235
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 1025 GTTTGGTTTGGTTGTTTGATCACTAACATCAAACTCTCCTCTTGTTTTGTAGAAAACACA 1084
Query 1236 CACTTGGCATCCATCACTGACTGGTGTAATTGTAGAAAAATTCTACAAAATATGTCAGCT 1295
||| ||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||
Sbjct 1085 CACATGGCATCCATCACTGACCGGTGTAATTGAAGAGAAATTCTACAAAATATGTCAGCT 1144
Query 1296 GCGTATGAAGGACATGGTTTCTAAGGCTTGCGCAAAACAAACCAATGAGCTTCCACCATG 1355
||||||||||||||||||||||||||||||| |||||| | ||| |||| || |||||
Sbjct 1145 GCGTATGAAGGACATGGTTTCTAAGGCTTGCTCAAAACGAGCCACTGAGAGACCGCCATG 1204
Query 1356 GATTGAGAAGACATTGTGGAAGGAAATGTGTGTGTATTGGGACACAGAAGAAGTCA-TTG 1414
|||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||
Sbjct 1205 GATTGAGAAGACATTGTGGAAGGAAATGTGTGAGTATTGGGACACAGAAGAAG-CACTTG 1263
Query 1415 CCAAGAGTTAAACCACATCCGCAAG-TCGAATGTCTGACCGTAATGGTCTTGGCCCTCAA 1473
||||||||| ||||||||| ||| | ||||||||||||||||||||||||||| |||||
Sbjct 1264 CCAAGAGTTCAACCACATCAGCA-GCTCGAATGTCTGACCGTAATGGTCTTGGTCCTCAC 1322
Query 1474 AAACATGTATCGGGGACAAAGTCTTTCTTACAAATCGAGTAAGAGATTGTAAGTTACATC 1533
|| |||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 1323 AAGCATGTATCGGGGCCAAAGTCTTTCTTACAAATCGAGCAAGAGATGGTAAGTTACATC 1382
Query 1534 AAGCACTCTTGTTTATTTA--T--T----------AAGAATCTGAATTGTTTTGTGAACA 1579
||||||||||||||||||| | | |||||| |||||| |||||||||||
Sbjct 1383 AAGCACTCTTGTTTATTTACATAATGGTTTTCCTTAAGAATTTGAATTTTTTTGTGAACA 1442
Query 1580 ACATTTCAGGAAATTGAGCTGAGAAGACAACCTACTATTGTTGAGATATTCCTTAGGACT 1639
||||||||||||||||||||| |||||| ||||||||||| |||||||||| ||||||||
Sbjct 1443 ACATTTCAGGAAATTGAGCTGGGAAGACCACCTACTATTGGTGAGATATTCATTAGGACT 1502
Query 1640 CATACCAAAAAAGATGGGACGTT--GTTGACACGAAGATGCAAGAAATTCATGAGGCATA 1697
||||||||||||||||||| ||| ||||| | |||| ||| |||||||||||||||||
Sbjct 1503 CATACCAAAAAAGATGGGA-GTTTTGTTGATAGGAAGGCGCAGGAAATTCATGAGGCATA 1561
Query 1698 TTTGTATGA-CAAGGAAGCTAAGTTGGTTCCCCTTGAGAATGATGAAGGGTCTGATGGTA 1756
|||| | || ||||||||||||||||| | |||||| |||||||||||||||||||||||
Sbjct 1562 TTTGAA-GAACAAGGAAGCTAAGTTGGCTGCCCTTGTGAATGATGAAGGGTCTGATGGTA 1620
Query 1757 CTTCCCGTCGATTAGAACTATCTCAAGAGGATGATGATGAGATTTTCCTTCAGGTAATGT 1816
| |||||||||| |||||||||||||||||| ||||||||||| |||||| ||||||||
Sbjct 1621 CATCCCGTCGATCAGAACTATCTCAAGAGGAGGATGATGAGATCTTCCTTTTGGTAATGT 1680
Query 1817 GGTTAATACttttttttttAATTCACTTCCTTCATCTTTTAAGAACTAATCCTCTTGTCT 1876
|| | ||| || || | | ||||| ||||||||||||||||||||||||||||| |
Sbjct 1681 --TT--T--TTTATTATT-A-T-CACTTACTTCATCTTTTAAGAACTAATCCTCTTGTTT 1731
Query 1877 TTTGTTTGCATTCAACTGTCACAAACGAGAGAGAGGTATACTTCGGAATGGGAAGCTTAG 1936
||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1732 TTTTTTTGCAGTCAACTGTCACAAACGAGAGAGGGGTATACTTCGGAATGGGAAGCTTAG 1791
Query 1937 GGAGGTACATCAATGAGAAGCGGAAGTACCCATGAAACACTTATGCTTTCACTTCCTTTG 1996
||||||||||||||| |||||||||||||||| ||| || || ||||||||||||||| |
Sbjct 1792 GGAGGTACATCAATGGGAAGCGGAAGTACCCAGGAAGCAGTTCTGCTTTCACTTCCTT-G 1850
Query 1997 CAATCACAGTTTGAGGAAGTCAACCGCAAGATAGAAGAACAAGCGACTCTCCAATTACAT 2056
|| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct 1851 CAGTCACAGCTTGAGGAAGCCAACCGCAAGATAGAAGAACAAGCGACTCTCCAAGCACAT 1910
Query 2057 CGTAAGGCAGAGGAATTGCGGGTAAAAGTTGAGCAAGCAGATATCAAGCGTGTTGCTAAT 2116
|| ||||||||| ||||||||| |||| |||||||||||| ||||||||||||||||||
Sbjct 1911 CGGGAGGCAGAGGCATTGCGGGTGAAAGCTGAGCAAGCAGAGATCAAGCGTGTTGCTAAT 1970
Query 2117 AAGCAACAAACAGAGATCAAACACTTGAGGATGGTGAAGAAGTACTTGACAGAAACTAAC 2176
|||||||| ||||||||||||||||||| |||||||||||||||||||| |||||| ||
Sbjct 1971 GAGCAACAAGCAGAGATCAAACACTTGAGCATGGTGAAGAAGTACTTGACCGAAACTGAC 2030
Query 2177 CCCATGTTTCTCGAATTCCTCGAGTCTGCT 2206
|||| |||||||| |||||||||||||||
Sbjct 2031 CCCAAGTTTCTCGCCTTCCTCGAGTCTGCT 2060
Score = 375 bits (203), Expect = 5e-103
Identities = 360/434 (83%), Gaps = 18/434 (4%)
Strand=Plus/Plus
Query 321 TCTCCTCGCAGATCTGGATCGACTCTGTTTCGAGCATCCGGCTCGACTCAACCTAGATCT 380
||||||||| ||||||| ||||||| ||||||||||| || ||||||||||||||||||
Sbjct 274 TCTCCTCGCGGATCTGGCTCGACTCCATTTCGAGCATCTGGATCGACTCAACCTAGATCT 333
Query 381 CGAGGATCTATTCATCATCTAGCCTCCA-CGTTGAAACAATCTCCAGAGGCAGTTCAACC 439
|||||||| | || | | | | | || || ||| ||| | | | |||||
Sbjct 334 GGAGGATCT-CGCCGGTTC-AACGGGAAGCCTACAATCAGTCTACAGCGCCGGATCAACG 391
Query 440 TGAAGCCTCCAATCAGTCTCCAGCGGCGGTTCAA-CGAGAAGCATCCAATCCTCTACTTT 498
|||||||||||||||||||||||| |||||||| || ||||| |||||||||| || |
Sbjct 392 GGAAGCCTCCAATCAGTCTCCAGCGCCGGTTCAACCG-GAAGCCTCCAATCCTCCAC-CT 449
Query 499 AGG-AAGCGTCAAATCCTCCACCTCGAGTCTTTGTATCACATCACAGCTCTCAAGCTCAA 557
|| | |||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 450 CGGCAGGCGTCAAATCCTCCACCTCGAGCCTCTGTATCACATCACAGCTCTCAAGCTCAA 509
Query 558 AACTCACACGCGGAGGAAGATGAAGATGAGGAAGCTGAGTTTGAGGCTGATTTTGAAAGG 617
|||||||| ||||| |||||||||||||||||||||||| | |||||| |||||||
Sbjct 510 AACTCACATGCGGAAGAAGATGAAGATGAGGAAGCTGAG---G---CTGATTATGAAAGG 563
Query 618 GAATCAACTATCCCTGAAGATTTGCTTGCAACTCTATATGAGTTGCTTGC-CCAGCCAAG 676
||||||||| |||||||||||| |||||| ||||| ||||||||||| | || |||| |
Sbjct 564 GAATCAACTCTCCCTGAAGATTCGCTTGCTACTCTCCATGAGTTGCTT-CTCCGGCCAGG 622
Query 677 CCATGAGAAATATACAACGGTCATCTCTCCTAAATT-GAGCCTCAAACTCTAT-GGTTAG 734
| |||||| |||||||||||||||||||| | ||| |||||| |||| |||| ||| ||
Sbjct 623 ACGTGAGAAGTATACAACGGTCATCTCTCCCACATTTGAGCCTGAAAC-CTATTGGTAAG 681
Query 735 CTGAGTATATTAGG 748
||||||| ||||||
Sbjct 682 CTGAGTAGATTAGG 695
Score = 228 bits (123), Expect = 2e-58
Identities = 202/238 (85%), Gaps = 13/238 (5%)
Strand=Plus/Plus
Query 65 CCCCC-AAATAGACCCACTTCTTCCCA-CCAAAT-CGAGTTGAAAT-GAAGACCAAGGAG 120
||||| |||| |||||||||||||||| || | ||||||| ||| |||||||
Sbjct 57 CCCCCAAAATCGACCCACTTCTTCCCAGCC-TGTACGAGTTG-AATCGAAGACC------ 108
Query 121 TTGAATCGACGGCCCAGGGGGCTTCCCAGCCAATACGAGTTCACGCCGGCGAATCGTCAA 180
||||||||| | || ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 109 TTGAATCGAAGACCTAGGGGTCTTCCCAGCCAGTACGAGTTCACGCCGGCGAATCGTCAA 168
Query 181 GTCCTGCTTCAAGATTCTGAACGAGATCTGATTGCACATCCTCCAACAAGTCAAACCGTG 240
| || |||||||||||||||| ||| | ||||||||| |||||||| ||| |||| |
Sbjct 169 GCCCCACTTCAAGATTCTGAACAAGAGCCGATTGCACAACCTCCAACGGGTCCAACCATC 228
Query 241 AGGGACTATCCTCCTCTGACGCAACTTT-CCAGTCAGGCGAAGGATCTCCTTGTGGAT 297
|||||||||||||||| ||||||||||| |||||||||||||||||||||| | ||||
Sbjct 229 AGGGACTATCCTCCTCCGACGCAACTTTTCCAGTCAGGCGAAGGATCTCCTCGCGGAT 286
Score = 87.9 bits (47), Expect = 3e-16
Identities = 52/54 (96%), Gaps = 1/54 (2%)
Strand=Plus/Plus
Query 906 TATATGGTAAGCTGAGTAGATTAGGTTTAGGGTTAATATTGAGTAATATGTGTG 959
||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 672 TAT-TGGTAAGCTGAGTAGATTAGGTTTAGGGTTAATATTGAGTAATGTGTGTG 724
> Ahg484611 jgi|Araly1|484611|fgenesh2_kg.5__603__AT4G05505.1
Length=2008
Score = 1520 bits (823), Expect = 0.0
Identities = 1229/1411 (87%), Gaps = 84/1411 (6%)
Strand=Plus/Plus
Query 846 AGTTGATTAGGTGAAGCGTTAATATTGAGTAA------TGTGTATATGCTAAGTTGATTA 899
||| |||||||| || ||||||||||||||| ||||||| |||||||| |||||
Sbjct 632 AGTAGATTAGGTTTAGGGTTAATATTGAGTAATGTGTGTGTGTATCTGCTAAGTAGATTA 691
Query 900 GGTTTGTATATGGTAAGCTGAGTAGATTAGGTTTAGGGTTAATATTGAGT-A-A------ 951
||| |||||||||||||||||||| ||||||||||||||||||||||||| | |
Sbjct 692 GGTGTGTATATGGTAAGCTGAGTATATTAGGTTTAGGGTTAATATTGAGTAATATGTGTG 751
Query 952 --TAT-GT--G-T--G-AG--TT-TAT--AG-ATGCTAATTGGTTTATGTAATTGTAGGT 996
||| || | | | || || ||| || |||||||||||||||||||||||||||
Sbjct 752 TGTATGGTAAGCTGAGTAGATTTGTATAAAGCTTGCTAATTGGTTTATGTAATTGTAGGT 811
Query 997 TTGGTCACGAAAATGGTAAGATGACCCAGAAGATCACAAAGGTATTTAAAAACAAGTTTG 1056
|||||||||| ||||||||| |||| | |||||||||||||||||| | ||||||||||
Sbjct 812 TTGGTCACGACAATGGTAAGCTGACTCGGAAGATCACAAAGGTATTCACAAACAAGTTTA 871
Query 1057 ATGGGCCATATTACAGTTGGAGCTATGTACCTACAGAAA-AAGACACAAATACTTCCTCG 1115
||||||||||||||| |||||||| ||||||||| |||| |||||||||||||||||||
Sbjct 872 ATGGGCCATATTACAATTGGAGCTGTGTACCTACTGAAAGAAGACACAAATACTTCCTCA 931
Query 1116 AATTCGCCGTAAATTAACTTTTATCTCCTAGTAATCTCTTCTATTGTTTGTATCCATTTG 1175
|||||| || ||| | | ||| |||||||||| ||||||||||||
Sbjct 932 AATTCG-CG----GTAA-----A-----T--TAA---CTTCTATTGTCTGTATCCATTTG 971
Query 1176 GTTTGGTTTGGTTGTTTGATCACTAACATCAAATTCTCCTCTTGTTTTATAGAAAACACA 1235
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 972 GTTTGGTTTGGTTGTTTGATCACTAACATCAAACTCTCCTCTTGTTTTGTAGAAAACACA 1031
Query 1236 CACTTGGCATCCATCACTGACTGGTGTAATTGTAGAAAAATTCTACAAAATATGTCAGCT 1295
||| ||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||
Sbjct 1032 CACATGGCATCCATCACTGACCGGTGTAATTGAAGAGAAATTCTACAAAATATGTCAGCT 1091
Query 1296 GCGTATGAAGGACATGGTTTCTAAGGCTTGCGCAAAACAAACCAATGAGCTTCCACCATG 1355
||||||||||||||||||||||||||||||| |||||| | ||| |||| || |||||
Sbjct 1092 GCGTATGAAGGACATGGTTTCTAAGGCTTGCTCAAAACGAGCCACTGAGAGACCGCCATG 1151
Query 1356 GATTGAGAAGACATTGTGGAAGGAAATGTGTGTGTATTGGGACACAGAAGAAGTCA-TTG 1414
|||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||
Sbjct 1152 GATTGAGAAGACATTGTGGAAGGAAATGTGTGAGTATTGGGACACAGAAGAAG-CACTTG 1210
Query 1415 CCAAGAGTTAAACCACATCCGCAAG-TCGAATGTCTGACCGTAATGGTCTTGGCCCTCAA 1473
||||||||| ||||||||| || || ||||||||||||||||||||||||||| |||||
Sbjct 1211 CCAAGAGTTCAACCACATCAGC-AGCTCGAATGTCTGACCGTAATGGTCTTGGTCCTCAC 1269
Query 1474 AAACATGTATCGGGGACAAAGTCTTTCTTACAAATCGAGTAAGAGATTGTAAGTTACATC 1533
|| |||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 1270 AAGCATGTATCGGGGCCAAAGTCTTTCTTACAAATCGAGCAAGAGATGGTAAGTTACATC 1329
Query 1534 AAGCACTCTTGTTTA-TT---T-A---------TTAAGAATCTGAATTGTTTTGTGAACA 1579
||||||||||||||| || | | |||||||| |||||| |||||||||||
Sbjct 1330 AAGCACTCTTGTTTATTTACATAATGGTTTTCCTTAAGAATTTGAATTTTTTTGTGAACA 1389
Query 1580 ACATTTCAGGAAATTGAGCTGAGAAGACAACCTACTATTGTTGAGATATTCCTTAGGACT 1639
||||||||||||||||||||| |||||| ||||||||||| |||||||||| ||||||||
Sbjct 1390 ACATTTCAGGAAATTGAGCTGGGAAGACCACCTACTATTGGTGAGATATTCATTAGGACT 1449
Query 1640 CATACCAAAAAAGATGGGACG--TTGTTGACACGAAGATGCAAGAAATTCATGAGGCATA 1697
||||||||||||||||||| | ||||||| | |||| ||| |||||||||||||||||
Sbjct 1450 CATACCAAAAAAGATGGGA-GTTTTGTTGATAGGAAGGCGCAGGAAATTCATGAGGCATA 1508
Query 1698 TTTGTATG-ACAAGGAAGCTAAGTTGGTTCCCCTTGAGAATGATGAAGGGTCTGATGGTA 1756
|||| | | |||||||||||||||||| | |||||| |||||||||||||||||||||||
Sbjct 1509 TTTG-AAGAACAAGGAAGCTAAGTTGGCTGCCCTTGTGAATGATGAAGGGTCTGATGGTA 1567
Query 1757 CTTCCCGTCGATTAGAACTATCTCAAGAGGATGATGATGAGATTTTCCTTCAGGTAATGT 1816
| |||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||
Sbjct 1568 CATCCCGTCGATCAGAACTATCTCAAGAGGAGGATGATGAGATCTTCCTTCTGGTAATGT 1627
Query 1817 GGTTAATACttttttttttAATTCACTTCCTTCATCTTTTAAGAACTAATCCTCTTGTCT 1876
|| | |||| || || | |||||| ||||||||||||||||||||||||||| |||
Sbjct 1628 -CTT--T--TTTTATTATT-A-TCACTTACTTCATCTTTTAAGAACTAATCCTCTTATCT 1680
Query 1877 TTTGTTTGCATTCAACTGTCACAAACGAGAGAGAGGTATACTTCGGAATGGGAAGCTTAG 1936
||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1681 TTT-TTTGCAGTCAACTGTCACAAACGAGAGAGGGGTATACTTCGGAATGGGAAGCTTAG 1739
Query 1937 GGAGGTACATCAATGAGAAGCGGAAGTACCCATGAAACACTTATGCTTTCACTTCCTTTG 1996
||||||||||||||| |||||||||||||||| ||| || || ||||||||||||||| |
Sbjct 1740 GGAGGTACATCAATGGGAAGCGGAAGTACCCAGGAAGCAGTTCTGCTTTCACTTCCTT-G 1798
Query 1997 CAATCACAGTTTGAGGAAGTCAACCGCAAGATAGAAGAACAAGCGACTCTCCAATTACAT 2056
|| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct 1799 CAGTCACAGCTTGAGGAAGCCAACCGCAAGATAGAAGAACAAGCGACTCTCCAAGCACAT 1858
Query 2057 CGTAAGGCAGAGGAATTGCGGGTAAAAGTTGAGCAAGCAGATATCAAGCGTGTTGCTAAT 2116
|| ||||||||| || |||||| |||| |||||||||||| |||||||||||| |||||
Sbjct 1859 CGGGAGGCAGAGGCATCGCGGGTGAAAGCTGAGCAAGCAGAGATCAAGCGTGTTACTAAT 1918
Query 2117 AAGCAACAAACAGAGATCAAACACTTGAGGATGGTGAAGAAGTACTTGAC-AGAAACTAA 2175
|||||||| || ||||||||||||||||||||||||||||||||||||| | ||||| |
Sbjct 1919 GAGCAACAAGCAAAGATCAAACACTTGAGGATGGTGAAGAAGTACTTGACCA-AAACTGA 1977
Query 2176 CCCCATGTTTCTCGAATTCCTCGAGTCTGCT 2206
||||| |||||||| || ||||||||||||
Sbjct 1978 CCCCAAGTTTCTCGCCTTTCTCGAGTCTGCT 2008
Score = 337 bits (182), Expect = 3e-91
Identities = 286/334 (86%), Gaps = 15/334 (4%)
Strand=Plus/Plus
Query 420 TCTCCAGAGGCAGTTCAACCTGAAGCCTCCAATCAGTCTCCAGCGGCGGTTCAA-CGAGA 478
||||||| | | ||||||| |||||||| |||||||||||||| |||||||| || ||
Sbjct 319 TCTCCAGCGCCGGTTCAACGGGAAGCCTCTAATCAGTCTCCAGCACCGGTTCAACCG-GA 377
Query 479 AGCATCCAATCCTCTACTTTAGG-AAGCGTCAAATCCTCCACCTCGAGTCTTTGTATCAC 537
||| |||||||||| || | || | |||||||||||||||||||||| || ||||||||
Sbjct 378 AGCCTCCAATCCTCCAC-CTCGGCAGGCGTCAAATCCTCCACCTCGAGCCTCTGTATCAC 436
Query 538 ATCACAGCTCTCAAGCTCAAAACTCACACGCGGAGGAAGATGAAGATGAGGAAGCTGAGT 597
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 437 ATCACAGCTCTCAAGCTCAAAACTCACATGCGGAAGAAGATGAAGATGAGGAAGCTGAG- 495
Query 598 TTGAGGCTGATTTTGAAAGGGAATCAACTATCCCTGAAGATTTGCTTGCAACTCTATATG 657
| |||||| |||||||||||||||| |||||||||||| |||||| ||||| |||
Sbjct 496 --G---CTGATTATGAAAGGGAATCAACTCTCCCTGAAGATTCGCTTGCTACTCTCCATG 550
Query 658 AGTTGCTTGC-CCAGCCAAGCCATGAGAAATATACAACGGTCATCTCTCCTAAATT-GAG 715
|||||||| | || |||| | | |||||| |||||||||||||||||||| | ||| |||
Sbjct 551 AGTTGCTT-CTCCGGCCAGGACGTGAGAAGTATACAACGGTCATCTCTCCCACATTTGAG 609
Query 716 CCTCAAACTCTAT-GGTTAGCTGAGTATATTAGG 748
||| |||| |||| ||| ||||||||| ||||||
Sbjct 610 CCTGAAAC-CTATTGGTAAGCTGAGTAGATTAGG 642
Score = 200 bits (108), Expect = 4e-50
Identities = 193/232 (83%), Gaps = 14/232 (6%)
Strand=Plus/Plus
Query 46 AGGAAGGGTATAGAAGATT-CCCCC-AAATAGACCCACTTCTTCCCA-CCAAAT-CGAGT 101
|||||||| || ||||||| ||||| |||| |||||||||||||||| || | ||||
Sbjct 22 AGGAAGGGGATCGAAGATTCCCCCCAAAATCGACCCACTTCTTCCCAGCC-TGTAGGAGT 80
Query 102 TGAAAT-GAAGACCAAGGAGTTGAATCGACGGCCCAGGGGGCTTCCCAGCCAATACGAGT 160
|| ||| ||||| | ||||||||| | || ||||| ||||||||||| |||||||
Sbjct 81 TG-AATCGAAGA-C-----TTTGAATCGAAGACCTAGGGGTCTTCCCAGCCAGTACGAGT 133
Query 161 TCACGCCGGCGAATCGTCAAGTCCTGCTTCAAGATTCTGAACGAGATCTGATTGCACATC 220
||||||||||||||||||||| || |||||||||||||||| ||| | ||||||||| |
Sbjct 134 TCACGCCGGCGAATCGTCAAGCCCCACTTCAAGATTCTGAACAAGAGCCGATTGCACAAC 193
Query 221 CTCCAACAAGTCAAACCGTGAGGGACTATCCTCCTCTGACGCAACTTT-CCA 271
||||||| ||| |||| | |||||||||||||||| ||||||||||| |||
Sbjct 194 CTCCAACGGGTCCAACCATCAGGGACTATCCTCCTCCGACGCAACTTTTCCA 245
Score = 87.9 bits (47), Expect = 3e-16
Identities = 52/54 (96%), Gaps = 1/54 (2%)
Strand=Plus/Plus
Query 906 TATATGGTAAGCTGAGTAGATTAGGTTTAGGGTTAATATTGAGTAATATGTGTG 959
||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 619 TAT-TGGTAAGCTGAGTAGATTAGGTTTAGGGTTAATATTGAGTAATGTGTGTG 671
> Ahg935848 jgi|Araly1|935848|scaffold_500039.1
Length=745
Score = 486 bits (263), Expect = 2e-136
Identities = 614/772 (80%), Gaps = 70/772 (9%)
Strand=Plus/Plus
Query 4 GCTTCAAGTGATGAAGACTCGTGGTGG---AGGCAAGAGAGGAAAAGGAAGGGTATAGAA 60
|||| || ||||||||||||||||||| |||||||||||| || | ||| || |||
Sbjct 12 GCTTGAA-TGATGAAGACTCGTGGTGGAAAAGGCAAGAGAGG--AA-G--GGG-ATCGAA 64
Query 61 GATT--CCCCC-AAATAGACCCACTTCTTCCCA-CCAAAT-CGAGTTGAAAT-GAAGACC 114
|||| ||||| |||| |||||||||||||||| || | ||||||| ||| |||||||
Sbjct 65 GATTCCCCCCCAAAATCGACCCACTTCTTCCCAGCC-TGTACGAGTTG-AATCGAAGACC 122
Query 115 AAGGAGTTGAATCGACGGCCCAGGGGGCTTCCCAGCCAATACGAGTTCACGCCGGCGAAT 174
||||||||| | || ||||| ||||||||||| |||||||||||||||||||||
Sbjct 123 ------TTGAATCGAAGACCTAGGGGTCTTCCCAGCCATTACGAGTTCACGCCGGCGAAT 176
Query 175 CGTCAAGTCCTGCTTCAAGATTCTGAACGAGATCTGATTGCACATCCTCCAACAAGTCAA 234
||||||| || |||||||||||||||| ||| | ||||||||| |||||||| ||| |
Sbjct 177 CGTCAAGCCCCACTTCAAGATTCTGAACAAGAGCCGATTGCACAACCTCCAACGGGTCCA 236
Query 235 ACCGTGAGGGACTATCCTCCTCTGACGCAAC-TTTCCAGTCAGGCGAAGGATCTCCTTGT 293
||| | |||||||||||||||| |||||||| |||||||||||| |||||||||||| |
Sbjct 237 ACCATCAGGGACTATCCTCCTCCGACGCAACTTTTCCAGTCAGGTGAAGGATCTCCTCGC 296
Query 294 GGATATAGAT---CT-C--TTCGGGGATCTC-CTTCTCCTC--GC-AGATCTGGATCGAC 343
|||| | | | || | |||| | ||| | || ||| | ||||||||| ||
Sbjct 297 GGATCTGGCTCGACTCCATTTCGAGCATC-CGGATCGACTCAACCTAGATCTGGA-GGA- 353
Query 344 TCTGTTTCGAGCATCCGGCTCGACT-CAACCTAGATCTCGAG-GATCTATTCATCATCTA 401
|||| || ||| || || | || ||| | || |||| || | | |||| | |
Sbjct 354 TCTG-TT----CAT-CGTCTAGCCTCCAATC-AG-TCTCCAGCG-CCGGTTCAACGGGAA 404
Query 402 GCCTCCACGTTGAAACAATCTCCAGAGGCAGTTCAACCTGAAGCCTCCAATCAGTCTCCA 461
| || || || || ||||||| | | ||||||| |||||||||||||||||||||
Sbjct 405 G-CT-TAC----AATCAGTCTCCAGCGCCGGTTCAACGGGAAGCCTCCAATCAGTCTCCA 458
Query 462 GCGGCGGTTCAA-CGAGAAGCATCCAATCCTCTACTTTAGG-AAGCGTCAAATCCTCCAC 519
||| |||||||| || ||||| |||||||||| || | || | ||||||||||||||||
Sbjct 459 GCGTCGGTTCAACCG-GAAGCCTCCAATCCTCCAC-CTCGGCAGGCGTCAAATCCTCCAC 516
Query 520 CTCGAGTCTTTGTATCACATCACAGCTCTCAAGCTCAAAACTCACACGCGGAGGAAGATG 579
|||||| || |||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 517 CTCGAGCCTCTGTATCACATCACAGCTCTCAAGCTCAAAACTCACATGCGGAAGAAGATG 576
Query 580 AAGATGAGGAAGCTGAGTTTGAGGCTGATTTTGAAAGGGAATCAACTATCCCTGAAGATT 639
||||||||||||||||| | || ||| |||||||||||||||| | ||||||||||
Sbjct 577 AAGATGAGGAAGCTGAG---G---CTAATTATGAAAGGGAATCAACTCTTCCTGAAGATT 630
Query 640 TGCTTGCAACTCTATATGAGTTGCTTGCC-CAGCCAAGCCATGAGAAATATACAACGGTC 698
|||||| ||||| ||||||||||| | |||||| | | |||||| | ||||||||||
Sbjct 631 CGCTTGCTACTCTCCATGAGTTGCTT-CTTCAGCCAGGACGTGAGAAGTTTACAACGGTC 689
Query 699 ATCTCTCCTAAATT-GAGCCTCAAACTCTAT-GGTTAGCTGAGTATATTAGG 748
|||||||| | ||| |||||| ||| |||| ||| ||||||||| ||||||
Sbjct 690 ATCTCTCCCACATTTGAGCCTGGAAC-CTATTGGTAAGCTGAGTAGATTAGG 740
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83912809735
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5