BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G08263.1 Length=330 Score E Sequences producing significant alignments: (Bits) Value Ahg924010 jgi|Araly1|924010|scaffold_105291.1 84.2 5e-16 > Ahg924010 jgi|Araly1|924010|scaffold_105291.1 Length=1048 Score = 84.2 bits (45), Expect = 5e-16 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 47 CGCATCTCTGGCGAAGAAGCCGTTGGAAGTCGTCGCATCAACTTCGAAGAA 97 ||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct 179 CGCATCTCTAGCGAAGAAGCCGTTGGAAGTCGTCGCATCGACTTCGAAGAA 229 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 11675610234 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5