BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G08480.1
Length=2838
Score E
Sequences producing significant alignments: (Bits) Value
Ahg942638 jgi|Araly1|942638|scaffold_603182.1 2045 0.0
Ahg489755 jgi|Araly1|489755|fgenesh2_kg.6__2889__AT4G08500.1 1546 0.0
> Ahg942638 jgi|Araly1|942638|scaffold_603182.1
Length=2386
Score = 2045 bits (1107), Expect = 0.0
Identities = 1492/1673 (89%), Gaps = 45/1673 (3%)
Strand=Plus/Plus
Query 701 TTCAGGGTCATGATTTGAGTGAAGCAGGTTCTATTGGTGTTGTTGTTGCTTCTAATTTTA 760
||||| |||| | |||||||||||||||| ||| |||||||||||||||||||||||| |
Sbjct 729 TTCAGAGTCAGGGTTTGAGTGAAGCAGGTCCTAGTGGTGTTGTTGTTGCTTCTAATTTGA 788
Query 761 CGCTTTCTGAGTCGAATAAGATTGAGAACTTAAATAGTTTGAGGGATAAGGAAATTGTTG 820
|| |||| |||||||| |||||||||||||||| |||||||| |||||||||| ||||||
Sbjct 789 CGGTTTCCGAGTCGAACAAGATTGAGAACTTAAGTAGTTTGACGGATAAGGAAGTTGTTG 848
Query 821 ATGGTGATATGGTAGAGAATAGGTGCGGTATTGAGCGAAAACCGACTATTTTGGTGAAGT 880
|||||| || ||||||||| | | | |||||||||||||||||||| |||||||||||||
Sbjct 849 ATGGTGTTACGGTAGAGAACAAGCGTGGTATTGAGCGAAAACCGACCATTTTGGTGAAGT 908
Query 881 CGAGAGGGTATCTTGTTCAC-AATGATGAT-GTGGGTGTTGGTGGTGGAATTAAGGGTGT 938
|||||||||||||||||| | ||||||| | |||| ||||||||||||||||||||| ||
Sbjct 909 CGAGAGGGTATCTTGTTC-CGAATGATG-TGGTGGCTGTTGGTGGTGGAATTAAGGGGGT 966
Query 939 AAGACCACCAGTACTAAACGTTCCT-CGTGCGGATAAGGAAGTTGTTGATGGTGGTACGG 997
||||||||| ||||||||| || || || || ||||||||||||||||||| ||||| ||
Sbjct 967 AAGACCACCGGTACTAAACCTTACTCCG-GCTGATAAGGAAGTTGTTGATGATGGTATGG 1025
Query 998 TGGAGAGCAAGAGTGGTATTGAATGGAAACCAACTATTTTGGTGAAGTCAAAAGGGTATC 1057
|||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1026 TGGAGAACAAGAGTGATATTGAACAAAAACCAACTATTTTGGTGAAGTCAAAAGGGTATC 1085
Query 1058 TTGTTTCCAATGAT--GGTGGAAT-AAAG-GG-GG---TAA---CAT--CACCGGTACTA 1104
||||| |||||||| ||||| | | || || ||| || |||| ||||||
Sbjct 1086 TTGTTCCCAATGATGCGGTGG-TTGTTGGTGGTGGAATTAAGGTAATACCACCAGTACTA 1144
Query 1105 AATCTT-CGCCCGACAGATAAGGAAGTTGTTGATAGTGGTACGGTAGAGAATA-GACGTG 1162
|| ||| | | || |||||||||||| |||||| |||||||||||||||||| || |||
Sbjct 1145 AACCTTCCTCAAGA-AGATAAGGAAGTCGTTGATGGTGGTACGGTAGAGAATAGGA-GTG 1202
Query 1163 GTATTAAGGGCGTAAGACCATCGGTACTTAAGCCTCCTCCGGTGATGAAACTACCTCCAG 1222
|||| ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 1203 GTATAAAGGGGGTAAGACCATCAGTACTTAAGCCTCCTCCGGTGATGAAGCTACCTCCAG 1262
Query 1223 TTGATCTTCCGGGATCATCTTGGGATATCCTTACTCATTTTGCTCCTGATAGTGAAATAG 1282
|||||||||||||||||||||||||| | ||||||||||||||||| |||||||||| ||
Sbjct 1263 TTGATCTTCCGGGATCATCTTGGGATTTTCTTACTCATTTTGCTCCGGATAGTGAAACAG 1322
Query 1283 TTAGGCGGCCGAGTTCCTCTTCTTCTTCCGAAAATGGTTGTGATGAAGAAGAAGCCGAGG 1342
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct 1323 TTAGGCGGCCGAGTTCCTCTTCTTCTTCCGAAAATGGTTGTGATGAAGAGGAAGCCGGGG 1382
Query 1343 ATGACAAAGTGGAAAAGGAAGAGACGGGAGATATGTTTATCCAGTTGGAGGATACGACTG 1402
|||| |||||||||| ||||||||||||||||||||||||||| |||| ||||||||||
Sbjct 1383 ATGAAAAAGTGGAAACGGAAGAGACGGGAGATATGTTTATCCAAATGGATGATACGACTG 1442
Query 1403 ATGAGGCATGCTCATTCACTACAAACGAGGGTGACTCCTCAAGTACAGTATCCAATACCT 1462
||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||
Sbjct 1443 ATGAGGCATGCTCATTCACTACAAATGAGTGTGACTCCTCAAGTTCAGTATCCAATACCT 1502
Query 1463 CACCGATTTGTGTCTCTGGGGGATCTATCAATACTTCTTGGCAAAAGGGTCAACTTCTGC 1522
| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1503 CGCCGATTTATGTCTCTGGAGGATCTATCAATACTTCTTGGCAAAAGGGTCAACTTCTGC 1562
Query 1523 GACAAGGATCGTTTGGCTCTGTGTATGAAGCCATTTCAGAAGATGGGGACTTCTTTGCTG 1582
||| |||||| |||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 1563 GACGAGGATCATTTGGCTCTGTGTATGAAGCCATTTCAGAAGATGGGCTCTTCTTTTCTG 1622
Query 1583 TCAAGGAAGTTTCACTTCTT-GATCAGGGAAGTCAGGCACAAGAATGCATACAACAACTT 1641
|| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 1623 TCGAGGAAGTTTCACTT-TTAGATCAGGGAAGTCAGGCACAAGAATGCATACAACAACTT 1681
Query 1642 GAGGGGGAAATTGCACTACTTAGTCAGCTTGAGCATCAGAATATTCTGCGATATCGTGGC 1701
||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct 1682 GAGGGGGAAGTTGCACTACTTAGTCAGCTTGAGCATCGGAATATTCTGCGATACCGTGGC 1741
Query 1702 ACAGACAAGGACGGGTCAAATTTGTATATTTTTCTTGAGCTTGTAACACAAGGATCCCTT 1761
|||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||
Sbjct 1742 ACAGACAAGGACGGGTCAAATTTGTACATCTTTCTTGAGCTTGTAACCCAAGGATCCCTT 1801
Query 1762 CTAGAACTCTACCGAAGATACCAGATTCGGGACTC-GCTAATCTCCTTGTACACAAAACA 1820
||| ||||||||| |||||||||| ||||||| || | || | || ||||||||||||||
Sbjct 1802 CTAAAACTCTACCAAAGATACCAGCTTCGGGAATCTG-TAGTGTCTTTGTACACAAAACA 1860
Query 1821 AATCCTTGACGGTTTGAAATATCTTCACCATAAAGG-TTTCATTCACAGGGACATTAAAT 1879
|| |||||||| ||||||||||||||| ||||||| ||| ||||||||||||| ||||
Sbjct 1861 GATTCTTGACGGCTTGAAATATCTTCACGATAAAGGCTTTG-TTCACAGGGACATCAAAT 1919
Query 1880 GTGCAACTATATTGGTGGACGCCAATGGCACCGTCAAACTTGCAGATTTTGGATTGGCAA 1939
|||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1920 GTGCAAATGTATTGGTGGACGCTAATGGCACCGTCAAACTTGCAGATTTTGGATTGGCAA 1979
Query 1940 AGGTGTCAAAGTTAAACGACATTAAGTCCCGCAAGGAAACTCTATTTTGGATGGCTCCAG 1999
||||||| ||||||||||||| ||| ||| |||||| ||||| ||||||||||||||| |
Sbjct 1980 AGGTGTCCAAGTTAAACGACAGTAAATCCTGCAAGGGAACTCCATTTTGGATGGCTCCGG 2039
Query 2000 AGGTTATTAACCGGAAGGATAATGATGGTTAC-A-G-AAGTCCAGCTGATATATGGAGCC 2056
|||||||||||| |||| |||||||| | | | | |||||||||||||||||||||||
Sbjct 2040 AGGTTATTAACCCCAAGGGTAATGATGATGGCTATGGAAGTCCAGCTGATATATGGAGCC 2099
Query 2057 TCGGGTGCACTGTGCTGGAAATGTGTACTGGTCAGATCCCATACTCT-GATCTAGA-ACC 2114
| || ||||||||||| ||||||||||| ||||| ||||| |||| | | |||| | |||
Sbjct 2100 TTGGTTGCACTGTGCTAGAAATGTGTACCGGTCATATCCCCTACTTTAG-TCTA-ACACC 2157
Query 2115 CGTTGAAGCCCTGTTTAGGATCAGAA-GGGGTACGCTTCCGGA-AGTACCTGATACTTTA 2172
|||| |||||| | |||||||| ||| ||||||||||||| || | ||||||||||| ||
Sbjct 2158 CGTTCAAGCCCAGATTAGGATC-GAAAGGGGTACGCTTCCAGACA-TACCTGATACTCTA 2215
Query 2173 TCACTAGACGCTCG-GCATTTCATACTTA-AGTGTCTCAAATTGAACCCGGAAGAGCGTC 2230
| ||||| ||||| | |||||||| ||| | ||||||||| ||||||| |||||||| |
Sbjct 2216 TTGCTAGATGCTCGAG-ATTTCATAGTTACA-TGTCTCAAAGTGAACCCCGAAGAGCGGC 2273
Query 2231 CAACTGCAACTGAGCTACTGAACCATCCATTTGTGAGAAGGCCCTTACCATCCTCAGGCT 2290
|||||||| |||| || ||||||||||||||||||||||||||||||||||| || ||||
Sbjct 2274 CAACTGCAGCTGAACTGCTGAACCATCCATTTGTGAGAAGGCCCTTACCATCGTCGGGCT 2333
Query 2291 CAGGATCAACATCTCCGCTAATCCGTAGATGAATCTAATTTTATTAGATTGCC 2343
|||||||| |||||||||| ||||| |||||| |||||||||| |||||||||
Sbjct 2334 CAGGATCAGCATCTCCGCTTATCCGCAGATGAGTCTAATTTTAGTAGATTGCC 2386
Score = 337 bits (182), Expect = 3e-91
Identities = 355/430 (83%), Gaps = 46/430 (11%)
Strand=Plus/Plus
Query 252 TCCCAATGAAGATATTTCCGTTTCAACTTCTTC-TC---G-CT--AT-TTGGTGT-TTGA 302
|||||||||||||||||| |||||||||||||| || | || | || || | ||||
Sbjct 304 TCCCAATGAAGATATTTCTGTTTCAACTTCTTCGTCGATGACTCGCTCTTTGTTTATTGA 363
Query 303 TAAAATTCTAGCTCTTATGAAGAAA------------TCACCAGGACGAAGAGGAGATAA 350
|| ||||||||||| |||||||||| ||||| ||| |||||||||||||
Sbjct 364 TAGAATTCTAGCTCGTATGAAGAAATCTCCTCTTCTTTCACCGGGAAGAAGAGGAGATAA 423
Query 351 GACTAGTCCGGCGCGGCGGTTAGACCGTAGTGATGCGGTGAGGAGGAATATCGA-TTATG 409
||| ||||||| |||||||||||||||| ||||||| || |||||||||| | |||||
Sbjct 424 GACAAGTCCGGTGCGGCGGTTAGACCGTCGTGATGC-GT--TGAGGAATATC-AGTTATG 479
Query 410 ACGCAGGTGAAGA---------TT---CTTCTTCGTTGTTGATAACTCGTTCTTTGGATT 457
| ||||||||||| || |||||||||||||||| ||||||||||||||||
Sbjct 480 ATGCAGGTGAAGATTCTTTTGGTTCAACTTCTTCGTTGTTGATGACTCGTTCTTTGGATT 539
Query 458 TCCCGAATCGTACTAGTTTTCGAGTCGATGGAGTTGATGATGGAGAAATAGATCGGATTT 517
|||||||||||| |||||||||||||| |||||||||||| |||||||| ||| ||||||
Sbjct 540 TCCCGAATCGTATTAGTTTTCGAGTCGGTGGAGTTGATGAAGGAGAAATTGATAGGATTT 599
Query 518 ATCAGTATATTGGTGTTTCTGGTCCTGAAGATTTTGCTATTTCTTCTGATGCTTGGAAAG 577
||| |||| ||| |||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct 600 ATCGGTATTTTGATGTTTCTGGTCCTGAAGATTTTGCCATTTCTTCTGATGCTTGGGAAG 659
Query 578 CTCGTATGGAGCATGAGCGTTCTTCTTCAGATGTTGTTAATAAGTTAAAGTCTCTTGATC 637
|| ||| || ||||||||||||||||||||||| |||| ||| ||||||||||| |
Sbjct 660 CTGGTA---AG---GAGCGTTCTTCTTCAGATGTTGTGAATAGGTTGAAGTCTCTTGA-C 712
Query 638 -TTGATAGTC 646
||||| |||
Sbjct 713 ATTGATTGTC 722
Score = 274 bits (148), Expect = 3e-72
Identities = 175/188 (93%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 1 ATGAAGAAGTCGTCGGATAAGTCACCGGTGCGGCAACATGACACGGCGACGCAAATCAAC 60
|||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||
Sbjct 23 ATGAAGAAGTCGTCGGATAAGTCACCGGTGCGGCGACATGACACGGCGAAGCAATTCAAC 82
Query 61 TCTGACGCAGTGTCTTCTTCTACTTCCTTCACTGATTCCGACTCTACTTGTTCCTTTTTG 120
||||||| |||||||||||||| |||||||||||||||||| || |||||||||||||||
Sbjct 83 TCTGACGAAGTGTCTTCTTCTAGTTCCTTCACTGATTCCGAGTCGACTTGTTCCTTTTTG 142
Query 121 ACTCCCTCCATGGAGTTCCCGGATCGAATCAGTTTCCGG-AGAATCGATTTTAGTGAAGC 179
|||||||| ||||||||||||||||| |||||||||||| | ||| ||||| ||||||||
Sbjct 143 ACTCCCTCTATGGAGTTCCCGGATCGCATCAGTTTCCGGCA-AATGGATTTGAGTGAAGC 201
Query 180 AGCTCCTA 187
||||||||
Sbjct 202 AGCTCCTA 209
> Ahg489755 jgi|Araly1|489755|fgenesh2_kg.6__2889__AT4G08500.1
Length=2479
Score = 1546 bits (837), Expect = 0.0
Identities = 1137/1280 (89%), Gaps = 28/1280 (2%)
Strand=Plus/Plus
Query 1160 GTGGTATTAAGGGCGTAAGACCATCGGTACTTAAGCCTCCTCCGGTGATGAAACTACCTC 1219
||||||||||||| ||||||||| | ||||||||||||||||||| |||||||| |||||
Sbjct 935 GTGGTATTAAGGGGGTAAGACCACCAGTACTTAAGCCTCCTCCGGCGATGAAACGACCTC 994
Query 1220 C-AGTTGATCTTCCGGGATCATCTTGGGATATCCTTACTCATTTTGCTCCTGATAGTGAA 1278
| | ||||||||| |||||| ||||||||| ||||||||||||| ||||| | ||||||
Sbjct 995 CTA-TTGATCTTCAGGGATCTTCTTGGGATTTCCTTACTCATTTCGCTCC--A-AGTGAA 1050
Query 1279 ATAGTTAGGCGGCCGAGTT-C-C-TCTTCTTCTTCCGAAAATGGTTGTGATGAAGAA-GA 1334
| ||||| ||||||||||| | | |||||||||||||| ||||| ||||||| | || ||
Sbjct 1051 ACAGTTAAGCGGCCGAGTTCCTCTTCTTCTTCTTCCGAGAATGGCTGTGATG-ACAAGGA 1109
Query 1335 AGCCGAGGATGACAAAGTGGAAAAGGAAGAGACGGGAGATATGTTTATCCAGTTGGAGGA 1394
||| |||| || ||||||||| |||||||| ||||| || |||| | ||||||| |||
Sbjct 1110 AGCTAAGGAAGAGGAAGTGGAAACGGAAGAGATGGGAGCTAGGTTTGTTCAGTTGGGGGA 1169
Query 1395 TACGACTGATGAGGCATGCTCATTCACTACAAACGAGGGTGACTCCTCAAGTACAGTATC 1454
|||| |||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1170 TACGGCTGACGAGGCATGCTCATTCACTACAAACGAGGGTGACTCGTCAAGCACAGTATC 1229
Query 1455 CAATACCTCACCGATTTGTGTCT-CTGGGGGATCTATCAATACTTCTTGGCAAAAGGGTC 1513
|||||| || || || | | || ||| |||||||||| ||| |||||||| |||||||
Sbjct 1230 CAATACTTCGCCTATCTAT-CCTGATGGAGGATCTATCATTACGTCTTGGCAGAAGGGTC 1288
Query 1514 AACTTCTGCGACAAGGATCGTTTGGCTCTGTGTATGAAGCCATTTCAGAAGATGGGGACT 1573
|||||||| ||| |||||| ||||| ||||||||||||| |||||||| |||||||||||
Sbjct 1289 AACTTCTGGGACGAGGATCATTTGGTTCTGTGTATGAAGGCATTTCAGGAGATGGGGACT 1348
Query 1574 TCTTTGCTGTCAAGGAAGTTTCACTTCTTGATCAGGGAAGTCAGGCACAAGAATGCATAC 1633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1349 TCTTTGCTGTCAAGGAAGTTTCACTTCTTGATCAGGGAAGTCAGGCACAAGAATGCATAC 1408
Query 1634 AACAACTTGAGGGGGAAATTGCACTACTTAGTCAGCTTGAGCATCAGAATATTCTGCGAT 1693
|||||||||||||||| |||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct 1409 AACAACTTGAGGGGGAGATTGCATTACTTTGTCAGCTTCAGCATCAGAATATTGTGCGAT 1468
Query 1694 ATCGTGGCACAGACAAGGACGGGTCAAATTTGTATATTTTTCTTGAGCTTGTAACACAAG 1753
||||||| |||| ||||||||||||||||||||| |||||||||||||||||||| || |
Sbjct 1469 ATCGTGGTACAGCCAAGGACGGGTCAAATTTGTACATTTTTCTTGAGCTTGTAACCCAGG 1528
Query 1754 GATCCCTTCTAGAACTCTACCGAAGATACCAGATTCGGGACTC-GCTAATCTCCTTGTAC 1812
| ||||||||| ||||||||| |||||| ||| |||||||||| | || | |||||||||
Sbjct 1529 GCTCCCTTCTAAAACTCTACCAAAGATATCAGCTTCGGGACTCTG-TAGTTTCCTTGTAC 1587
Query 1813 ACAAAACAAATCCTTGACGGTTTGAAATATCTTCACCATAAAGGTTTCATTCACAGGGAC 1872
|||| ||| || |||||||||||||||||||| ||| |||||||||| ||||||||||||
Sbjct 1588 ACAAGACAGATTCTTGACGGTTTGAAATATCTCCACGATAAAGGTTTTATTCACAGGGAC 1647
Query 1873 ATTAAATGTGC-AACTATATTGGTGGACGCCAATGGCACCGTCAAACTTGCAGATTTTGG 1931
|| |||||||| || ||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 1648 ATCAAATGTGCCAA-TATATTGGTGGACGCTAATGGCGCCGTCAAACTTGCAGATTTTGG 1706
Query 1932 ATTGGCAAAGGTGTCAAAGTTAAACGACATTAAGTCCCGCAAGGAAACTCTATTTTGGAT 1991
||||||||||||||| ||||| ||||||||||||||| |||||| ||||| |||||||||
Sbjct 1707 ATTGGCAAAGGTGTCGAAGTTCAACGACATTAAGTCCTGCAAGGGAACTCCATTTTGGAT 1766
Query 1992 GGCTCCAGAGGTTATTAACCGGAAGGATAATGATGGTTACAGAAGTCCAGCTGATATATG 2051
||||||||||||||||||||||||||||| |||||| || |||||||||||||||| ||
Sbjct 1767 GGCTCCAGAGGTTATTAACCGGAAGGATAGTGATGGGTATGGAAGTCCAGCTGATATTTG 1826
Query 2052 GAGCCTCGGGTGCACTGTGCTGGAAATGTGTACTGGTCAGATCCCATACTCTGATCTAGA 2111
|||||| ||||||||||| ||||||||||||||||| ||||||| ||||| ||||||||
Sbjct 1827 GAGCCTTGGGTGCACTGTACTGGAAATGTGTACTGGGAAGATCCCCTACTCCGATCTAGA 1886
Query 2112 ACCCGTTGAAGCCCTGTTTAGGATCAGAAGGGGTACGCTTCCGGAAGTACCTGATACTTT 2171
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 1887 ACCCGTTCAAGCCCTGTTTAGGATCGGAAGGGGTACGCTTCCGGAAGTACCTGATACCTT 1946
Query 2172 ATCACTAGACGCTCGGCATTTCATACTTAAGTGTCTCAAATTGAACCCGGAAGAGCGTCC 2231
|| ||| ||||||||||| ||||||||||||||||||||| |||||||||||||||| ||
Sbjct 1947 ATTACTGGACGCTCGGCAATTCATACTTAAGTGTCTCAAAGTGAACCCGGAAGAGCGGCC 2006
Query 2232 AACTGCAACTGAGCTACTGAACCATCCATTTGTGAGAAGGCCCTTACCATCC-T---C-- 2285
||||||| |||| ||||||||||||||||||||||||||||||||||||||| | |
Sbjct 2007 AACTGCAGCTGAACTACTGAACCATCCATTTGTGAGAAGGCCCTTACCATCCATGGGCTC 2066
Query 2286 AGG---CTCAGGATCAACATCTCCGCTAATCCGTAGATGAATCTAATTTTATTAGATTGC 2342
||| ||| |||||| ||||||||||| |||||||||||| ||||||||| || | |||
Sbjct 2067 AGGAGGCTCGGGATCAGCATCTCCGCTACTCCGTAGATGAAGCTAATTTTAGTAAACTGC 2126
Query 2343 CTCCAT-AGGGGTAACCAGAAGGTTTATGAGATATTAGACCCCATAGAAACT-TTAGGGG 2400
||| | ||| ||||| |||| ||||||||| |||||||||| ||||||| || ||||
Sbjct 2127 CTCTAACAGGCATAACCGGAAGATTTATGAGAGGTTAGACCCCAGAGAAACTCTT-GGGG 2185
Query 2401 AGACACGAGATATGATTCTT 2420
||||||||||||||||||||
Sbjct 2186 AGACACGAGATATGATTCTT 2205
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 107109768940
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5