BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G08500.1
Length=2490
Score E
Sequences producing significant alignments: (Bits) Value
Ahg489755 jgi|Araly1|489755|fgenesh2_kg.6__2889__AT4G08500.1 2226 0.0
Ahg942638 jgi|Araly1|942638|scaffold_603182.1 1323 0.0
> Ahg489755 jgi|Araly1|489755|fgenesh2_kg.6__2889__AT4G08500.1
Length=2479
Score = 2226 bits (1205), Expect = 0.0
Identities = 1583/1752 (90%), Gaps = 80/1752 (5%)
Strand=Plus/Plus
Query 735 GAGTTGAGTGAGATTGGGAATTTAA-TCACTCCTGTGGATAG-GTTAGTAGCTGATGGT- 791
||||||||||||||||||||||||| | |||||||||||||| | |||||| |||||||
Sbjct 772 GAGTTGAGTGAGATTGGGAATTTAAGT-ACTCCTGTGGATAGAG-TAGTAGTTGATGGTG 829
Query 792 GT-------G----GTAGAGAATAGGCGT-GTTATGGAAAGAACACCAACTA--TT-GTG 836
|| | ||||||||||||||| ||| | || |||| || |||| || |||
Sbjct 830 GTACGCCAGGAATTGTAGAGAATAGGCGTGGTT-TTCAACGAACTCCGACTATTTTGGTG 888
Query 837 AAGTCGAAAGGGTATCTTGTACCAAATAATGTAGTGGCTGTTGGTGTTGGTGTTGGTGGT 896
|||||||||||||||||||| || ||| ||||||| | | ||||||||||
Sbjct 889 AAGTCGAAAGGGTATCTTGTTCCCAATGATGTAGT--C----------GCTGTTGGTGGT 936
Query 897 GGTATTAAGGGGCTAAGACCACCAGTACTTAAGCCTCCTCCGGCTATGAAACGACCCCCT 956
|||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 937 GGTATTAAGGGGGTAAGACCACCAGTACTTAAGCCTCCTCCGGCGATGAAACGACCTCCT 996
Query 957 ATTGATCATCGGGGATCGTCTTGGGATTTCCTGACGCATTTCGCTCCAAGTGAAACAGTT 1016
||||||| || |||||| |||||||||||||| || ||||||||||||||||||||||||
Sbjct 997 ATTGATCTTCAGGGATCTTCTTGGGATTTCCTTACTCATTTCGCTCCAAGTGAAACAGTT 1056
Query 1017 AAGCGGCCGAGTTCCTCTTCTTCTTCTTCCGAGGATGGATGCGATGA-AGAGGAAGGC-A 1074
||||||||||||||||||||||||||||||||| |||| || ||||| | ||||| || |
Sbjct 1057 AAGCGGCCGAGTTCCTCTTCTTCTTCTTCCGAGAATGGCTGTGATGACA-AGGAA-GCTA 1114
Query 1075 AGGAAGAGGAAGCGGAAGCGGAAGAGATGGGAGCTAGGTTTATCCAGTTGGGGGATACGG 1134
|||||||||||| |||| ||||||||||||||||||||||| | ||||||||||||||||
Sbjct 1115 AGGAAGAGGAAGTGGAAACGGAAGAGATGGGAGCTAGGTTTGTTCAGTTGGGGGATACGG 1174
Query 1135 CTGACGAGACGTGCTCATTCACTACAAATGAGGGTGACTCCTCAAGCACAGTATCCAATA 1194
|||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1175 CTGACGAGGCATGCTCATTCACTACAAACGAGGGTGACTCGTCAAGCACAGTATCCAATA 1234
Query 1195 CTTCGCCTATCTATCCAGATGGAGGAGCTATCATAACGTCTTGGCAAAAGGGTCAACTTT 1254
|||||||||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||
Sbjct 1235 CTTCGCCTATCTATCCTGATGGAGGATCTATCATTACGTCTTGGCAGAAGGGTCAACTTC 1294
Query 1255 TGGGACGAGGATCATTTGGTTCTGTGTATGAAGGCATTTCTGGAGATGGGGACTTCTTTG 1314
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1295 TGGGACGAGGATCATTTGGTTCTGTGTATGAAGGCATTTCAGGAGATGGGGACTTCTTTG 1354
Query 1315 CTGTCAAGGAAGTTTCACTTCTTGATCAGGGAAGTCAGGCACAAGAATGCATACAACAAC 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1355 CTGTCAAGGAAGTTTCACTTCTTGATCAGGGAAGTCAGGCACAAGAATGCATACAACAAC 1414
Query 1375 TTGAGGGGGAGATTAAACTACTTAGTCAGCTTCAGCATCAGAATATTGTGAGATATCGTG 1434
|||||||||||||| | ||||| |||||||||||||||||||||||||| |||||||||
Sbjct 1415 TTGAGGGGGAGATTGCATTACTTTGTCAGCTTCAGCATCAGAATATTGTGCGATATCGTG 1474
Query 1435 GCACAGCCAAGGATGGGTCAAACTTGTACATTTTTCTTGAGCTTGTAACCCAAGGG-TCC 1493
| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| |||
Sbjct 1475 GTACAGCCAAGGACGGGTCAAATTTGTACATTTTTCTTGAGCTTGTAACCCA-GGGCTCC 1533
Query 1494 CTTCTAAAACTCTACCAAAGATACCAGCTTCGGGACTCTGTAGTCTCCTTGTACACTAGA 1553
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||
Sbjct 1534 CTTCTAAAACTCTACCAAAGATATCAGCTTCGGGACTCTGTAGTTTCCTTGTACACAAGA 1593
Query 1554 CAGATTCTTGACGGTTTGAAATATCTCCACGATAAAGGTTTTATTCACAGGGACATCAAA 1613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1594 CAGATTCTTGACGGTTTGAAATATCTCCACGATAAAGGTTTTATTCACAGGGACATCAAA 1653
Query 1614 TGTGCAAATATATTGGTGGACGCTAATGGCGCCGTCAAACTTGCAGATTTTGGATTGGCA 1673
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1654 TGTGCCAATATATTGGTGGACGCTAATGGCGCCGTCAAACTTGCAGATTTTGGATTGGCA 1713
Query 1674 AAGGTTTCAAAGTTTAACGACATTAAGTCCTGCAAGGGAACTCCATTTTGGATGGCTCCA 1733
||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1714 AAGGTGTCGAAGTTCAACGACATTAAGTCCTGCAAGGGAACTCCATTTTGGATGGCTCCA 1773
Query 1734 GAGGTTATTAACCGAAAGGATAGTGATGGCTATGGAAGTCCAGCTGATATATGGAGCCTC 1793
|||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1774 GAGGTTATTAACCGGAAGGATAGTGATGGGTATGGAAGTCCAGCTGATATTTGGAGCCTT 1833
Query 1794 GGGTGCACTGTGCTGGAAATGTGTACTGGTCAGATCCCCTACTCTGATCTCGAACCCGTT 1853
||||||||||| ||||||||||||||||| ||||||||||||| ||||| |||||||||
Sbjct 1834 GGGTGCACTGTACTGGAAATGTGTACTGGGAAGATCCCCTACTCCGATCTAGAACCCGTT 1893
Query 1854 CAAGCCCTGTTTAGGATCGGAAGGGGTACTCTTCCGGAAGTACCTGATACGTTATCACTA 1913
||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||
Sbjct 1894 CAAGCCCTGTTTAGGATCGGAAGGGGTACGCTTCCGGAAGTACCTGATACCTTATTACTG 1953
Query 1914 GATGCTCGGCTTTTCATACTTAAGTGTCTTAAAGTGAACCCGGAAGAGCGGCCAACTGCA 1973
|| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1954 GACGCTCGGCAATTCATACTTAAGTGTCTCAAAGTGAACCCGGAAGAGCGGCCAACTGCA 2013
Query 1974 GCTGAACTGCTGAACCATCCATTTGTGAGAAGACCCTTACCATCCGTGGGTTCAGGAGGC 2033
|||||||| ||||||||||||||||||||||| |||||||||||| |||| |||||||||
Sbjct 2014 GCTGAACTACTGAACCATCCATTTGTGAGAAGGCCCTTACCATCCATGGGCTCAGGAGGC 2073
Query 2034 TCGGGATCAGCATCTCCCCTTCTCCGTAGATGAGGCTAATTTTAGTAAATTTCCTC-AAT 2092
||||||||||||||||| || |||||||||||| ||||||||||||||| | |||| ||
Sbjct 2074 TCGGGATCAGCATCTCCGCTACTCCGTAGATGAAGCTAATTTTAGTAAACTGCCTCTAAC 2133
Query 2093 AGGCATAACCCGAAGATTTATGAGAGATTAGATCCCAGAGAAACTATTGGG-AGACACGA 2151
|||||||||| ||||||||||||||| ||||| |||||||||||| ||||| ||||||||
Sbjct 2134 AGGCATAACCGGAAGATTTATGAGAGGTTAGACCCCAGAGAAACTCTTGGGGAGACACGA 2193
Query 2152 GACATGATTCTTC---G--acacacacacacGTGCGGTCGGGTTGCGCAGCAAGAGCCAA 2206
|| |||||||||| | ||||||||||||| ||||| |||||||||||||||||||||
Sbjct 2194 GATATGATTCTTCTTCGGCACACACACACACGCGCGGTTGGGTTGCGCAGCAAGAGCCAA 2253
Query 2207 ACTTACTTAGTTTCTGTGTCATTCGTTGGTTATTTGTTGCAAGTTATGTGTTGGGCTTGA 2266
|||| ||||||||| | ||| | | ||| |||| |||||||||||||||||
Sbjct 2254 ACTTCCTTAGTTTC-G-GTC-T-C-------ATTCGTTG----TTATGTGTTGGGCTTGA 2298
Query 2267 TTTTAAAACTGAAGAGCCTTATTTTTCTAGGAATTAGAAATGTCGACCTTGGGGTTTTTG 2326
||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct 2299 ----AAA-CTGAAGAGCCTTATTTTTCTAGGAATTAGAA-TGTCGACCTTGGGGTTTT-G 2351
Query 2327 GGTGTATAGGTTTTGTTTAGttttttttGTTAAATTATAGTGTATGTATGTCTGTATC-T 2385
|||||||||||||||||||| |||| ||||||||||||||||||| ||| |||||| |
Sbjct 2352 GGTGTATAGGTTTTGTTTAGCTTTT---GTTAAATTATAGTGTATGTCTGTATGTATCCT 2408
Query 2386 ATATCATGTAATGTA-T--A-A-TTATAGTTGGTTCTTAT--AGTTCCTGGCTTGTTGTA 2438
||||||||||||||| | | | ||||||||||||||||| |||||||| |||||||||
Sbjct 2409 ATATCATGTAATGTAATGTATAATTATAGTTGGTTCTTATCTAGTTCCTG-CTTGTTGTA 2467
Query 2439 ACTGTGTACACA 2450
||||||||||||
Sbjct 2468 ACTGTGTACACA 2479
Score = 987 bits (534), Expect = 0.0
Identities = 675/737 (92%), Gaps = 33/737 (4%)
Strand=Plus/Plus
Query 1 ATTATTCCACGAAACACCGCGTTTTTGTTTACATttcttctctttctctctctctct-tc 59
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct 1 ATTATTCCACGAAACACCGCGTTTTTGTTTACATTTCTTCTCTCTCTCTCTCTCTCTCTC 60
Query 60 tctcatatc-tctctctTCGCCGTCAGGTTTTGCCCAAATTTCTCGGTCTTCTTCACTCC 118
|||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TCTC-TCTCATCTCTCTTCGCCGTCAGGTTTTGCCCAAATTTCTCGGTCTTCTTCACTCC 119
Query 119 CGCGAGttttttttCTCGGGAAAATTTTCCAATTCCAAGCTCCATTGAAGCCAAGTAAGA 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 CGCGAGTTTTTTTTCTCGGGAAAATTTTCCAATTCCAAGCTCCATTGAAGCCAAGTAAGA 179
Query 179 GGTGCGATTCTCTTCAATTTTGACTT-GGAACTTGTAAATAGCGTATGGATTTGAGCTGG 237
||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 180 GGTGCGATTCTCTTCT-TTTTGACTTTGGAACTTGTAAATAGCGTATGGATTTTAGCTGG 238
Query 238 TTATGGACAGAATTCTAGCTCGTATGAAGAAATCAACTGGACGAAGAGGAGGAGATAAGA 297
||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct 239 TTATGGATAGAATTCTAGCTCGTATGAAGAAATCAGCGGGACGAAGAGGAGGAGATAAGA 298
Query 298 ATATTACTCCGGTACGGCGGTTAGAGCGTCGCGATGCGGCGAGGAATATCAATTACGACG 357
| | |||||||||||||||||||||||||| ||||||||||||||||||||||| || |
Sbjct 299 -T-T-ACTCCGGTACGGCGGTTAGAGCGTCGTGATGCGGCGAGGAATATCAATTATGATG 355
Query 358 CAGCTTC-ATGTTCTAGTTCGTCAGCTGAAGATCTTTCCGTTTCGACTTCTTCGTTGATG 416
|||| || | |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 356 CAGCGTCTA-GTTCTAGTTCGTCAGCTGAAGATCTTTCCGTTTCAACTTCTTCGTTGATG 414
Query 417 ACTCGCTCTTTGGAGTTTCCGGAGCCTACTAGTTTCCGAATCGGTGGTGGTGTTGGAG-A 475
|||||||||||||||||||| |||||||||||||| ||||||||||| |||| || || |
Sbjct 415 ACTCGCTCTTTGGAGTTTCCTGAGCCTACTAGTTTTCGAATCGGTGGAGGTGGTGAAGGA 474
Query 476 GA--TGGATCGGATTTATCGGTCTCTTGGTGTTTCTGGTCCTGATGATTTGGCTATTTCT 533
|| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 475 GAAATGGATCGGATTTATCGGTCTCTTGGTGTTTCTGGTCCTGATGATTTGGCGATTTCT 534
Query 534 TTTGATGCTTGGGAAGCTTGTAAGAAACGTTCTTCTTCAGATGTTGTTAATAGGTTTAAG 593
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 535 TTTGATGCTTGGGAAGCTTGTAAGAAGCGTTCTTCTTCAGATGTTGTTAATAGGTTTAAG 594
Query 594 TCTTTTGATCTTGATAA------GGTTC-GTGATCAGGATTTGAGTGAAGAAGGTCCTAG 646
|||||||| |||||||| ||||| | | || ||||||| |||| | ||||||||
Sbjct 595 TCTTTTGACCTTGATAATCATAAGGTTCAG-GCTCGGGATTTGGGTGATGCTGGTCCTAG 653
Query 647 TGGTGTTGTTGTTGGTTCTGATTCAATGAATCATAAGGTTCAGGGTCAGGATTTGAGTGA 706
||||||||||||| |||| |||||||||||||| | | ||||||||||||
Sbjct 654 TGGTGTTGTTGTTACTTCTAATTCAATGAATCAT------C----T--GGATTTGAGTGA 701
Query 707 AGCAGGTCCTAGTGGTG 723
|||||||||||||||||
Sbjct 702 AGCAGGTCCTAGTGGTG 718
> Ahg942638 jgi|Araly1|942638|scaffold_603182.1
Length=2386
Score = 1323 bits (716), Expect = 0.0
Identities = 1051/1208 (87%), Gaps = 42/1208 (3%)
Strand=Plus/Plus
Query 895 GTGGTATTAAGGGGCTAAGACCACCAGTACTTAAGCCTCCTCCGGCT-ATGAAACGACCC 953
||||||| |||||| |||||||| ||||||||||||||||||||| | ||||| | |||
Sbjct 1200 GTGGTATAAAGGGGGTAAGACCATCAGTACTTAAGCCTCCTCCGG-TGATGAAGCTACCT 1258
Query 954 CCTA-TTGATCATCGGGGATCGTCTTGGGATTTCCTGACGCATTTCGCTCC--A-AGTGA 1009
|| | |||||| || |||||| ||||||||||| || || ||||| ||||| | |||||
Sbjct 1259 CC-AGTTGATCTTCCGGGATCATCTTGGGATTTTCTTACTCATTTTGCTCCGGATAGTGA 1317
Query 1010 AACAGTTAAGCGGCCGAGTTCCTCTTCTTCTTCTTCCGAGGATGGATGCGATGAAGAGGA 1069
|||||||| ||||||||||| | | |||||||||||||| |||| || |||||||||||
Sbjct 1318 AACAGTTAGGCGGCCGAGTT-C-C-TCTTCTTCTTCCGAAAATGGTTGTGATGAAGAGGA 1374
Query 1070 AGGCAAGGAAGAGGAAGCGGAAGCGGAAGAGATGGGAGCTAGGTTTATCCAGTTGGGGGA 1129
|| | ||| || ||| |||| ||||||||| ||||| || ||||||||| ||| ||
Sbjct 1375 AGCCGGGGATGAAAAAGTGGAAACGGAAGAGACGGGAGATATGTTTATCCAAATGGATGA 1434
Query 1130 TACGGCTGACGAGACGTGCTCATTCACTACAAATGAGGGTGACTCCTCAAGCACAGTATC 1189
|||| |||| ||| | ||||||||||||||||||||| ||||||||||||| |||||||
Sbjct 1435 TACGACTGATGAGGCATGCTCATTCACTACAAATGAGTGTGACTCCTCAAGTTCAGTATC 1494
Query 1190 CAATACTTCGCCTATCTAT-CCAGATGGAGGAGCTATC-ATAACGTCTTGGCAAAAGGGT 1247
|||||| ||||| || ||| | ||||||| ||||| || || |||||||||||||||
Sbjct 1495 CAATACCTCGCCGATTTATGTC-TCTGGAGGATCTATCAAT-ACTTCTTGGCAAAAGGGT 1552
Query 1248 CAACTTTTGGGACGAGGATCATTTGGTTCTGTGTATGAAGGCATTTCTGGAGATGGGGAC 1307
|||||| || |||||||||||||||| ||||||||||||| |||||| | ||||||| |
Sbjct 1553 CAACTTCTGCGACGAGGATCATTTGGCTCTGTGTATGAAGCCATTTCAGAAGATGGGCTC 1612
Query 1308 TTCTTTGCTGTCAAGGAAGTTTCACTTCTT-GATCAGGGAAGTCAGGCACAAGAATGCAT 1366
|||||| ||||| |||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 1613 TTCTTTTCTGTCGAGGAAGTTTCACTT-TTAGATCAGGGAAGTCAGGCACAAGAATGCAT 1671
Query 1367 ACAACAACTTGAGGGGG-AGATTAAACTACTTAGTCAGCTTCAGCATCAGAATATTGTGA 1425
||||||||||||||||| || || |||||||||||||||| |||||| ||||||| ||
Sbjct 1672 ACAACAACTTGAGGGGGAAG-TTGCACTACTTAGTCAGCTTGAGCATCGGAATATTCTGC 1730
Query 1426 GATATCGTGGCACAGCCAAGGATGGGTCAAACTTGTACATTTTTCTTGAGCTTGTAACCC 1485
|||| |||||||||| |||||| |||||||| |||||||| |||||||||||||||||||
Sbjct 1731 GATACCGTGGCACAGACAAGGACGGGTCAAATTTGTACATCTTTCTTGAGCTTGTAACCC 1790
Query 1486 AAGGGTCCCTTCTAAAACTCTACCAAAGATACCAGCTTCGGGACTCTGTAGTCTCCTTGT 1545
|||| |||||||||||||||||||||||||||||||||||||| |||||||| || ||||
Sbjct 1791 AAGGATCCCTTCTAAAACTCTACCAAAGATACCAGCTTCGGGAATCTGTAGTGTCTTTGT 1850
Query 1546 ACACTAGACAGATTCTTGACGGTTTGAAATATCTCCACGATAAAGGTTTTATTCACAGGG 1605
|||| | ||||||||||||||| ||||||||||| ||||||||||| ||| |||||||||
Sbjct 1851 ACACAAAACAGATTCTTGACGGCTTGAAATATCTTCACGATAAAGGCTTTGTTCACAGGG 1910
Query 1606 ACATCAAATGTGCAAATATATTGGTGGACGCTAATGGCGCCGTCAAACTTGCAGATTTTG 1665
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 1911 ACATCAAATGTGCAAATGTATTGGTGGACGCTAATGGCACCGTCAAACTTGCAGATTTTG 1970
Query 1666 GATTGGCAAAGGTTTCAAAGTTTAACGACATTAAGTCCTGCAAGGGAACTCCATTTTGGA 1725
||||||||||||| || ||||| ||||||| ||| |||||||||||||||||||||||||
Sbjct 1971 GATTGGCAAAGGTGTCCAAGTTAAACGACAGTAAATCCTGCAAGGGAACTCCATTTTGGA 2030
Query 1726 TGGCTCCAGAGGTTATTAACCGAAAGGAT-A-G-TGATGGCTATGGAAGTCCAGCTGATA 1782
||||||| ||||||||||||| |||| | | | ||||||||||||||||||||||||||
Sbjct 2031 TGGCTCCGGAGGTTATTAACCCCAAGGGTAATGATGATGGCTATGGAAGTCCAGCTGATA 2090
Query 1783 TATGGAGCCTCGGGTGCACTGTGCTGGAAATGTGTACTGGTCAGATCCCCTACTCTGA-T 1841
|||||||||| || ||||||||||| ||||||||||| ||||| |||||||||| | | |
Sbjct 2091 TATGGAGCCTTGGTTGCACTGTGCTAGAAATGTGTACCGGTCATATCCCCTACT-TTAGT 2149
Query 1842 CTCGA-ACCCGTTCAAGCCCTGTTTAGGATCGGAAGGGGTACTCTTCCGGA-AGTACCTG 1899
|| | |||||||||||||| | ||||||||| ||||||||| ||||| || | ||||||
Sbjct 2150 CT-AACACCCGTTCAAGCCCAGATTAGGATCGAAAGGGGTACGCTTCCAGACA-TACCTG 2207
Query 1900 ATACGT-TATCACTAGATGCTCG-GCTTTTCATACTTA-AGTGTCTTAAAGTGAACCCGG 1956
|||| | ||| ||||||||||| | ||||||| ||| | ||||| ||||||||||| |
Sbjct 2208 ATAC-TCTATTGCTAGATGCTCGAG-ATTTCATAGTTACA-TGTCTCAAAGTGAACCCCG 2264
Query 1957 AAGAGCGGCCAACTGCAGCTGAACTGCTGAACCATCCATTTGTGAGAAGACCCTTACCAT 2016
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2265 AAGAGCGGCCAACTGCAGCTGAACTGCTGAACCATCCATTTGTGAGAAGGCCCTTACCAT 2324
Query 2017 CCGTGGGTTCAGGAGGCTCGGGATCAGCATCTCCCCTTCTCCGTAGATGAGGCTAATTTT 2076
| || | || | ||| |||||||||||||| ||| |||| ||||||| ||||||||
Sbjct 2325 C-GT-----C-GG-G-CTCAGGATCAGCATCTCCGCTTATCCGCAGATGAGTCTAATTTT 2375
Query 2077 AGTAAATT 2084
|||| |||
Sbjct 2376 AGTAGATT 2383
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 93854363680
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5