BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G09150.2
Length=3732
Score E
Sequences producing significant alignments: (Bits) Value
Ahg489787 jgi|Araly1|489787|fgenesh2_kg.6__2921__AT4G09150.1 5369 0.0
Ahg932653 jgi|Araly1|932653|scaffold_400641.1 303 4e-81
> Ahg489787 jgi|Araly1|489787|fgenesh2_kg.6__2921__AT4G09150.1
Length=3583
Score = 5369 bits (2907), Expect = 0.0
Identities = 3404/3635 (94%), Gaps = 69/3635 (2%)
Strand=Plus/Plus
Query 99 AACGAACAAAAATCAAATCTTCTCTCTGTTAAAATCTCACCGACTAGAGAAAAGCTTTGT 158
|||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||| |
Sbjct 1 AACGAAAAAAAATCAAATCTTCGCTCTGTTAACATCTCACCGACTAGAGAAAAGCTTTTT 60
Query 159 TTTTTCCAATTAAAGTTACA------TT-TTTTGTTTGAAC-AAATCACTTTCTGTGATC 210
||||||||| |||||||||| || |||| ||||||| ||||||||||||||||||
Sbjct 61 TTTTTCCAAATAAAGTTACATTTTTTTTCTTTTTTTTGAACAAAATCACTTTCTGTGATC 120
Query 211 TACATTTGTGTGGTCGTGAAATCAATGACGGAACCAGAAAGATTAGGAGGAATCTCCCTG 270
|||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 121 TACAATTGTGTGGTCGTGAAATCAATGACGGAACCGGAGCGATTAGGAGGAATCTCCCTG 180
Query 271 AGTTTTCCGGTGAATGAAGAAGATACGGTAACGACAACATCACCAAAGACTCTTCCACGG 330
|||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 AGTTTTCCGGCGAATGAGGAAGATACGGTAACGACAACATCACCAAAGACTCTTCCACGG 240
Query 331 AGGCTCCGTCGTCGTCTTCTCGAACCGAAGAGTCCTGTCTCCGCCGCAGAGATCGATTCC 390
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 241 AGGCTCCGTCGTCGTCTTCTCGAACCGAAGAGTCCTGTCTCCGCCGAAGAGATCGATTCC 300
Query 391 AAACTCAGAGAAGCTGATCTCCGTCGTCAGCAATATTATGAATCACTATCGAGTAAGGCA 450
||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct 301 AAACTCAGAGAAGCTGATCTCCGGCGTCAGCAATACTATGAATCACTATCGAGCAAGGCT 360
Query 451 CGACCTAAGATGAGAAGTCCGAGATCAGGAAGTATAGAGGAGCTTAGTCAGAGACTTGAA 510
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 361 CGACCTAAGATGAGAAGTCCGAGATCAGCAAGTATAGAGGAGCTTAGTCAGAGACTTGAA 420
Query 511 TCAAAGCTTAATGCTGCTGAACAAAAGAGGTTAAGTATTTTGGAGAAGGAGCTGGCTCGT 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 TCAAAGCTTAATGCTGCTGAACAAAAGAGGTTAAGTATTTTGGAGAAGGAGCTGGCTCGT 480
Query 571 TTGGCTAAGATGGATGAAGCTAGACAAGCTGCGAAGAATGGACTTGAGCAACGAGTTGAG 630
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 481 TTGGCTAAGATGGATGAAGCTAGACAAGCTGCGAAGAACGGACTTGAGCAACGGGTTGAG 540
Query 631 AAAGAGCGTGATGAGTTAGAGAGTAAGGTTGAAGAAAGGGTTTTGAAGGCTGAGAAGAAT 690
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 541 AAAGAGCGTGATGAGTTAGAGAGTAAGGTTGAAGAAAGGGTTTTAAAGGCTGAGAAAAAT 600
Query 691 AGGATGCTT-TTGTTTAAAGCTATGGCTCAACGAAGAGCGGCGAAGAGGCAGCGTGCTGC 749
|||||||| || |||||||||||||| || || |||||||||||||| ||||| |||||
Sbjct 601 AGGATGCTACTT-TTTAAAGCTATGGCACAGCGGAGAGCGGCGAAGAGACAGCGAGCTGC 659
Query 750 GCAGAGTTTGATGAAGAAAGCTATTCAGGAGACGAGGTATAAGGAGAGTGTGCGTGCTGC 809
||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct 660 ACAGAGTTTGATGAAGAAAGCTGTTCAGGAGAAGAGGTATAAGGAGAGTGTGCGTGCTGC 719
Query 810 GATTTATCAGAAGAGAGCAGCTGCAGAGAGTAAGCGGATGGGGATTTTGGAAGCGGAAAG 869
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 GATTTATCAGAAAAGAGCAGCTGCAGAGAGTAAGCGGATGGGGATTTTGGAAGCGGAAAG 779
Query 870 GAGAAGAGCGAATGCGAGATTGACTCGGGTGTTTGGTGCTGCTAGTTCTGTGCGGAGTCA 929
|||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||
Sbjct 780 GAGAAGAGCGAATGCGAGATTGACACGGGTTTTTGGTGCTGCTAGTTCTGTGCAGAGTCA 839
Query 930 AAAGGAAGCTGAGAGAAGGAAAATGAAGGACCGTTTAGAAGAGCGGCTTCAAAGGGCAAA 989
|||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||
Sbjct 840 AAAGGAAGCTGAAAGAAGGAAAATGAAGGAACGTTTAGAAGAGAGGCTTCAAAGGGCCAA 899
Query 990 GAAGCTGAAAGCGCAATATATGAGGCGAAGGAGAGGTATGGATAGTTGTTCATCTTCAAG 1049
||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 900 GAAACTGAAAGCGCAATATATGAGGCGAAGGAGAGGCATGGACAGTTGTTCATCTTCAAG 959
Query 1050 ATCAGAAACAATGCGAAAGAACCAAGTGCATCTTGTTAGGATGTTAGTAAGATGCTGGAG 1109
|||||||||||| |||||||||||||| ||||| ||||||||||||| ||||||||||||
Sbjct 960 ATCAGAAACAATCCGAAAGAACCAAGTTCATCTCGTTAGGATGTTAGAAAGATGCTGGAG 1019
Query 1110 GAGATTTGCTAAATACAAGAAATCTACTTTTGTCTTGGCTAGAGCATATCATGAGT-TGG 1168
||||||| | ||||||||||||||||||||||||||||||||||||||||| || | |
Sbjct 1020 GAGATTTACAAAATACAAGAAATCTACTTTTGTCTTGGCTAGAGCATATCAC-AGCCTCG 1078
Query 1169 GGATCAATGAAAAATCCATTGAGTCAGTACCATTTGAGCAGTTTGCCATTCAAATGAACT 1228
| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1079 GAATCAACGAAAAATCTATTGAGTCAGTACCGTTTGAGCAGTTTGCCATTCAAATGAACT 1138
Query 1229 CAGTTTCTGTAATTCAAACGGTCAAAGCATTGCTTGATCGCTTGGAGATCCGACTCACTC 1288
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 1139 CAGTTTCTGTAATTCAAACTGTGAAAGCATTGCTTGATCGCTTGGAGATCCGACTCACTC 1198
Query 1289 TATCTAAGGCATCCAATGTGGAGAACATTAATCATCTTCTTAAGCACATCTTTCCGCCTG 1348
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |
Sbjct 1199 TATCTAAGGCATCCAATGTGGAGAATATTAATCATCTTCTTAAGCACATCTTTCCCCCGG 1258
Query 1349 TTCGAAGAGGGAAATCACCCAGTCCCATGAGTAAAGGCGAGCAAAATTCACCCAATTCCA 1408
|||||||||| |||||||||| | ||||||||||||| |||||||| |||||||||||||
Sbjct 1259 TTCGAAGAGGAAAATCACCCACTTCCATGAGTAAAGGTGAGCAAAAGTCACCCAATTCCA 1318
Query 1409 AGATGGGATATCAAAAACTTAAAAAGATTGCGAGATATCCAGCTAGAATTTTTCTTTGTG 1468
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1319 AGATGGGATATCAAAAACTTAAAAAGATTGCGAGATATCCGGCTAGAATTTTTCTTTGTG 1378
Query 1469 CCTACATGATCAAGCAACATCCCGGTGCAATTTTTAGAGGAAGAGGTGAACATGAGATTG 1528
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1379 CCTACATGATCAAGCAACATCCCAGTGCAATTTTTAGAGGAAGAGGTGAACATGAGATTG 1438
Query 1529 CGCTTGTGGAATCTGCAACTTGTCTTATTCGGGAGTTTGAACTGCTGGTGAAAGTTATAT 1588
|||| ||||||||||| || | |||||||||||||||||||||| |||| ||| ||||||
Sbjct 1439 CGCTAGTGGAATCTGCTACCTATCTTATTCGGGAGTTTGAACTGTTGGTAAAAATTATAT 1498
Query 1589 TGGAAGGACCAGAATCTACCCTCCCGGGCAATGTATCTTTCGTAGCTCAACGTCCaaaaa 1648
||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||
Sbjct 1499 TGGAAGGACCAGAATGTACCCTCCCGGATAATGTATCTTTCGTAGCTCCACGTCCAAAAA 1558
Query 1649 aaTTCAGATCTCAGCTAGAAGCATTTGATAAAGCTTGGTGCTCTTACCTTGAGGGTTTTG 1708
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 1559 AATTCAGATCTCGGCTAGAAGCATTTGATAAAGCTTGGTGCTCTTACCTGGAGGGATTTG 1618
Query 1709 TAGTCTGGAAAATTAATGATGCTAAGCTTCTAGAAAAAGATTTAGCCAGAACTCAAGAGT 1768
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1619 TAGTCTGGAAAATTAAGGATGCTAAGCTTCTAGAAAAAGATTTAGCCAGAACTCAAGAGC 1678
Query 1769 CTGAGCTGTCTGAGGTATCAAAACATACTTCCTCTCCCAAAATAATAGACAGTGGCTTGA 1828
||||||||||||| ||||||||||||||||||||||||| |||| | || || | | |
Sbjct 1679 CTGAGCTGTCTGACGTATCAAAACATACTTCCTCTCCCACAATACT-GA-AG-G--T--A 1731
Query 1829 ATCAGAAGACGGTAAAGGCATCTTCTCCAACTAATCGGGCTTTATTCTCTGAAACTGATG 1888
|| | ||| | | ||||||||||||||||||||||||||||||||
Sbjct 1732 -TC---------T-------TCT-C-C-AACTAATCGGGCTTTATTCTCTGAAACTGATG 1771
Query 1889 GAGCACGAGAATCAAAAGCACCTGCAGATTCGCATCTTCCATCTTCATCTTCACCTTCAC 1948
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1772 GAGCACAAGAATCAAAAGCACCTGCAGATTCGCATCTTCCATCTTCATCTTCACC----- 1826
Query 1949 CGGGCTCATCGAATTTGTCACCCTCTTTGAACTCTGCAGGGAGCGAGGCCATTTCTACTC 2008
||||||||| || ||||| |||||||||||||||| | || |||| ||||| |||||
Sbjct 1827 -GGGCTCATCAAAATTGTCCCCCTCTTTGAACTCTGGA---AGTGAGGGCATTTTTACTC 1882
Query 2009 CAAACGTGGTAGCTAATAGCTTTGATGCAGCGTTGGCTAGTGAGAACGAAGTAATTGTAA 2068
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1883 CAAATGTGACAGCTAATAGCTTTGATGCAGCGTTGGCTAGTGAGAACGAAGTAATTGTAA 1942
Query 2069 ATGAAATTGTCCATGACAATAGCAGTAGTTTTGCTGATAGCCTCGACCCTAACACTGGGG 2128
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 1943 ATGAAATTGTCCATGACAATAGCAGTAGTTTTGCTGATAGCCTTGACCCTAATACTGGGG 2002
Query 2129 ATACAAGCAACCTTCAGGTGAGGGTTAAGGAGACAATGGAAAAGGCTTTCTGGGATGGTG 2188
|| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 2003 ATGCAAGCAACCTTCAGGTAAGGGTTAAGGAGACAATGGAAAAGGCTTTCTGGGATGGCG 2062
Query 2189 TCATGGAATCCATGAAACAGTCGCAGCCAGACTTCAGCTGGGTTATTAAACTCATGAAAG 2248
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 2063 TCATGGAATCCATGAAACAGTCGCAGCCAGACTTCAGCTGGGTTCTTAAACTCTTGAAAG 2122
Query 2249 AAGTCAGGGATGAACTCTGTGAGATATCTCCCAAAGACTGGAGACAAGAGATTGTTCAAA 2308
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2123 AAGTCAGGGATGAACTCTGTGAGATATCTCCCAAAGATTGGAGACAAGAGATTGTTCAAA 2182
Query 2309 CTATCGATACGGATGTGCTGTCACAGTTACTGGCTTCTGGTAATGTCGACATGGGTTATC 2368
| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2183 CGATCGATACGGATATGCTGTCACAGTTACTGGCTTCTGGTAATGTCGACATGGGTTATC 2242
Query 2369 TTGGAAATATTCTTGAGTTTTCCCTTGGCATTTTGCTGAAACTCTCTGCTCCAGCTAATG 2428
||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 2243 TTGGAAATATTCTAGAGTTTTCGCTTGGCATTTTACTGAAACTCTCTGCTCCAGCTAATG 2302
Query 2429 AAGAGGAAATCAGGGTTACTCACCATAAACTAATGACAGAACTTGGAGAGATAGTTCCAA 2488
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2303 AAGAGGAAATCAGGACCACTCACCATAAATTAATGACAGAACTTGGAGAGATAGTTCCAA 2362
Query 2489 CTGATGGCCATTCGAATTCGTCATATGCAGTCTTAATGGTTAAGGGGCTACGCTTTGTTT 2548
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2363 CTGAAGGCCATTCGAATTCGTCATATGCAGTCTTAATGGTTAAGGGGCTACGCTTTGTTT 2422
Query 2549 TGCAGCAGATTCAGATTCTAAAGAAGGAAATCAGCAAATCTCGTTTGAAACTCTTGGAGC 2608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2423 TGCAGCAGATTCAGATTCTAAAGAAGGAAATCAGCAAATCTCGTTTGAAACTCTTGGAGC 2482
Query 2609 CACTTCTTAAGGGACCTGCTGGTCTGGAATATCTGAAGAAGTCATTTTCCAGTCGGCATG 2668
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2483 CACTTCTAAAGGGACCTGCTGGTCTGGAATATCTGAAGAAGTCATTTTCCAGTCGGCATG 2542
Query 2669 GTTCCCCAGACCAAGCGTCTTCCTCGCTACCATTGACAAAACGTTGGCTTTTAAGTGTTC 2728
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2543 GTTCCCCAGACCAAGCGTCTTCCTCGCTACCATTGACAAAGCGTTGGCTTTTAAGTGTTC 2602
Query 2729 GAGGAGAAGCAGAGAGGGAGTGGAAAGAACACAAAGATGCTCTTTCTGCTGTCATAAATA 2788
||||||| ||| |||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct 2603 GAGGAGAGGCAAAGAGGGAGTGGAAAGAACACAAAGATGCTCTTTCTGCTCTCACAAATA 2662
Query 2789 ACCACTCTGGATCATCAGGCCTCCCTTCGACCACCATGCGAACTGGTGGCAATGTCTCCT 2848
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2663 ACCACTCTGGATCATCAGGCCTCCCTTCGACCACCATGCGAACTGGAGGCAATGTCTCCT 2722
Query 2849 CTGTTTCAAAAGTCAATACCCCTTCATCTCCATTTCCAGGAATCGAACTGTCAGAGTGCA 2908
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 2723 CTGTTTCAAAAGTCAATACCCCTTCGTCTCCATTTCCAGGAATTGAACTGTCAGAGTGCA 2782
Query 2909 AGGGAGAAACTGTGGATCTTCTTGTTCGCATTGGCCTGTTAAAAATGGTGAGCGAAATCG 2968
| ||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||| |
Sbjct 2783 AAGGAGAAACTGTAGATCTTCTTGTTCGCCTTGGCCTGTTAAAAATGGTTAGCGAAATTG 2842
Query 2969 GTGGTCTTACTTTAGAAACTGTCCCTGAAACATTTCAACTTAACCTATCTAGGCTGAGAG 3028
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2843 GTGGTCTTACTTTAGAAACTGTCCCTGAAACATTTCAACTTAACCTCTCTAGGCTGAGAG 2902
Query 3029 ATGTTCAATCCCAAATCCAGAAAATCACTCTTGTCTCCATCAGTGTTTTGATCCTCCAGC 3088
|||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 2903 CTGTTCAATCCCAAATCCAGAAAATCACTCTAGTCTCCATCAGTGTGTTGATCCTCCAGC 2962
Query 3089 AAACACTAGTAAGCGAAAACTCATCCTCGATTGACATGGAGGCTATTACACGGACTTGCA 3148
||||||| |||||||||||||||||| |||||||||||||| | |||||| |||||||||
Sbjct 2963 AAACACTTGTAAGCGAAAACTCATCCCCGATTGACATGGAGACCATTACATGGACTTGCA 3022
Query 3149 TAAACCGTCTTTACGAGATGCTAGACGCAAAACCTGATGCAGGTCTTTCAGAAATCATGG 3208
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3023 TTAACCGTCTTTACGAGATGCTAGACGCAAAACCTGATGCAGGTCTTTCAGAAATCATGG 3082
Query 3209 AAACACTCTCCGAGCTTCTTGATTCTAACGATGCAGAGACAAAGAAACAAGTAATCGCAA 3268
||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 3083 AAACACTCTCCAAACTTCTTGATTCTGACGATGCAGAGACAAAGAAACAAGTAATCGCAA 3142
Query 3269 ACATGCTTGTGAAAAGCTTACAAGCAGGAGACGCAGTGTTCACACATGTATCACAGACCA 3328
|||||||||| |||||||||||||||||||||||||| ||||||| ||| ||||||||||
Sbjct 3143 ACATGCTTGTAAAAAGCTTACAAGCAGGAGACGCAGTATTCACACGTGTTTCACAGACCA 3202
Query 3329 TATACCTAGCCATTAGAGCCGCGGTTTTGGCCGGAAACAACACGAAGAGAAAGCAGTTGG 3388
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 3203 TATACCTAGCCATTAGAGCTGCGGTTTTGGCAGGAAACAACACGAAGAGAAAGCAGTTGG 3262
Query 3389 TGGAAACAATGCTAAGAAAGATCGGAGCAGCTTCTCTCTCGGACAAGGTCATAGAGGTTT 3448
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 3263 TGGAAACAATGCTACGAAAGATCGGAGCAGCTTCTCTCTCGGACAAAGTCATAGAGGTTT 3322
Query 3449 CAGACATTCTTGTTCTTGTGGCAACAGTGTCACGTTCTGTTCATGGATTGTGGTATGAAG 3508
|| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 3323 CAAACATTCTTGTTCTTGTGGCAACAGTGTCACGTTCTGTTCATGGATTGTGGTACGAAG 3382
Query 3509 AATTGCTAAAGAAACCGAATTAAGAGACTATGTGGACCAATGGACCAGTGTGGGTTTGTT 3568
||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct 3383 AATTGCTGAAGAAACCGAATTAAGAGACTAAGTGGACCAATGGACCAGTGTGTGTTTGTT 3442
Query 3569 TATGGTTGGTTGGGTCCAGATTAAGTGTTTGTAGATAAGAGTCAGAACAACACACCACGT 3628
||||||||| || | || || ||||||||||||||||||||||||||||||
Sbjct 3443 TATGGTTGG--------AG-T---GT-TT-GTAGATAAGAGTCAGAACAACACACCACGT 3488
Query 3629 TTGTATTTA-TA---A---CTATTAGCTGTGATGCATCTGTAATACACTGTACCTACAAG 3681
||||||||| || | ||||||||||||| |||| |||||||| ||||||||||||
Sbjct 3489 TTGTATTTACTATTTATAACTATTAGCTGTGAAACATCAGTAATACAATGTACCTACAAG 3548
Query 3682 AATTCCAGTTTTCTCTATTGTGATTGATTCTAATT 3716
||||| |||||||||||| |||||||||||||||
Sbjct 3549 TATTCCGGTTTTCTCTATTTTGATTGATTCTAATT 3583
> Ahg932653 jgi|Araly1|932653|scaffold_400641.1
Length=259
Score = 303 bits (164), Expect = 4e-81
Identities = 183/192 (95%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 3385 TTGGTGGAAACAATGCTAAGAAAGATCGGAGCAGCTTCTCTCTCGGACAAGGTCATAGAG 3444
|||||||||||||||||| |||| |||||||||||||||||||| ||||| |||||||||
Sbjct 9 TTGGTGGAAACAATGCTACGAAAAATCGGAGCAGCTTCTCTCTCAGACAAAGTCATAGAG 68
Query 3445 GTTTCAGACATTCTTGTTCTTGTGGCAACAGTGTCACGTTCTGTTCATGGATTGTGGTAT 3504
|||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 69 GTTTCAAACATTCTTGTTCTTGTGGC-A-AGTGTCACGTTCTGTTCATGGATTGTGGTAC 126
Query 3505 GAAGAATTGCTAAAGAAACCGAATTAAGAGACTATGTGGACCAATGGACCAGTGTGGGTT 3564
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 127 GAAGAATTGCTGAAGAAACCGAATTAAGAGACTATGTGGACCAATGGACCAGTGTGGGTT 186
Query 3565 TGTTTATGGTTG 3576
||||||||||||
Sbjct 187 TGTTTATGGTTG 198
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 141003307965
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5