BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G10150.1 Length=742 Score E Sequences producing significant alignments: (Bits) Value Ahg489863 jgi|Araly1|489863|fgenesh2_kg.6__2997__AT4G10150.1 1074 0.0 > Ahg489863 jgi|Araly1|489863|fgenesh2_kg.6__2997__AT4G10150.1 Length=715 Score = 1074 bits (581), Expect = 0.0 Identities = 673/717 (94%), Gaps = 7/717 (1%) Strand=Plus/Plus Query 1 ATGTCTTACAGTGACCCAAACCAAAACCCGATTCCAGAAACTTACGCTCCATCAAACTCA 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 1 ATGTCTTACAGTGACCCAAACCAAAACCCAATTCCAGAAACTTACGCTCCATCGAACTCA 60 Query 61 ACTGAATCAGAGAAACTGAAACTTTACCAAGCTTTTATCTTCTCTGTTCCAATCTGTTTC 120 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ACTGAATCCGAGAAACTAAAACTTTACCAAGCTTTTATCTTCTCTGTTCCAATCTGTTTC 120 Query 121 ACATTCATCGTTCTCTTCGTTCTTTACGTCATTTACCTTCGTCGAAACAGCACCACCAAT 180 ||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 121 ACATTCATCGTCCTCTTCGTTCTTTACCTCATTTACCTTCGACGAAACAGCACCACCAAC 180 Query 181 GTTGATTGGTCTTCTCTTGGCATGCGTGGTGGTACCTTTGTCCCCACCAACAACAATCTC 240 || ||||||||||||||||| ||||||||||| | ||| || |||||||||||||||||| Sbjct 181 GTCGATTGGTCTTCTCTTGGAATGCGTGGTGGCATCTTCGTGCCCACCAACAACAATCTC 240 Query 241 TCAACGGCTGAATTAGGACTGAGCAAAGATATTAGAGAGATGCTTCCTGTTGTCATCTAC 300 |||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||| Sbjct 241 TCAACGGCTGAATTAGGACTGAGCAAAGATGTAAGAGAGATGCTTCCCATTGTCATCTAC 300 Query 301 AAGGAGAGTTTCATAGTCAAAGATTCACAATGTTCAGTGTGTCTTGGGGACTACCAAGCA 360 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 AAGGAGAGTTTCACAGTCAAAGATTCACAATGTTCAGTGTGTCTTGGGGACTACCAAGCA 360 Query 361 GAAGAGAAACTCCAACAAATGCCATCATGTGGGCACACTTTTCACATGGAATGTATTGAT 420 |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct 361 GAAGAGAAACTCCAACAAATGCCAGCATGTGGGCACACTTTTCACATGGAGTGTATTGAT 420 Query 421 C-TATGGCTCACATCACACACAACATGCCCTCTTTGTCGTCTCTCTCTTATCCCCAAACC 479 | | |||||||||||||||||||| |||||||||||||||||||||||||||| |||||| Sbjct 421 CGT-TGGCTCACATCACACACAACTTGCCCTCTTTGTCGTCTCTCTCTTATCCTCAAACC 479 Query 480 GTCCCTAGACCTGTCCCATCAAAGCACAGAGATTGTCTCTTCCATAGAAAACTCTAATGG 539 |||||||||||||||||| |||| | ||||||| |||||| |||||||||||| |||||| Sbjct 480 GTCCCTAGACCTGTCCCAGCAAACCCCAGAGATAGTCTCTCCCATAGAAAACTTTAATGG 539 Query 540 AGGAGAAGCTTCAACTCAACCAGATTCCCAGTCAGCAACCGAAGCAATAAGTCACACCGA 599 |||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct 540 AGGAGAAGCTTCGGCTCAACCAGATTCCCAGTCAACAACCGAAGCAATAAGTCACATCGA 599 Query 600 TGATGTCGAAGAAGGTAACCGAGATAGTCAAGAGGTCTCTAAGGAGAC-GG---AAGAGA 655 ||||| | ||||||||||||||||||||||||||||||||||||| || || |||||| Sbjct 600 TGATGGCCAAGAAGGTAACCGAGATAGTCAAGAGGTCTCTAAGGA-ACCGGCCGAAGAGA 658 Query 656 ATGACCGAAACAGCGTAGGGACATCTGATGGTTGTTGTACTTGTAGACTTGGTTAAA 712 |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 659 ATGACCCAAACAGCGTAGGGACATCTGATGGTTGTCGTACTTGTAGACTTGGTTAAA 715 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27334131489 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5