BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G10740.1 Length=1284 Score E Sequences producing significant alignments: (Bits) Value Ahg352144 jgi|Araly1|352144|fgenesh1_pg.C_scaffold_6002737 990 0.0 Ahg908078 jgi|Araly1|908078|Al_scaffold_0002_1159 824 0.0 Ahg925743 jgi|Araly1|925743|scaffold_201304.1 761 0.0 Ahg925736 jgi|Araly1|925736|scaffold_201297.1 202 6e-51 Ahg930411 jgi|Araly1|930411|scaffold_302868.1 176 3e-43 Ahg479757 jgi|Araly1|479757|fgenesh2_kg.3__2458__AT3G22421.1 154 2e-36 Ahg482868 jgi|Araly1|482868|fgenesh2_kg.4__1928__AT2G38590.1 104 2e-21 Ahg342698 jgi|Araly1|342698|fgenesh1_pg.C_scaffold_3002461 75.0 1e-12 > Ahg352144 jgi|Araly1|352144|fgenesh1_pg.C_scaffold_6002737 Length=1365 Score = 990 bits (536), Expect = 0.0 Identities = 837/978 (86%), Gaps = 37/978 (4%) Strand=Plus/Plus Query 1 ATGAGGACGACAATGTCAAATCTTCCAAAGGAACTAG-TAGAGGACATTGTCTCTAGGGT 59 |||| |||||| ||||||||||||||||| | | | | |||| || |||||||||||||| Sbjct 1 ATGACGACGACGATGTCAAATCTTCCAAATG-ATTTGTTAGAAGAGATTGTCTCTAGGGT 59 Query 60 TCCTTTACATTGTTTGAGAGCAA-TGCGATTAACTTGCAAAAACTGGAATGCTTTGTT-A 117 |||| || | | | ||||| || || ||||||| |||||||| |||||||||||||| | Sbjct 60 TCCTCTAAAATCTATGAGA-AAAGTGAGATTAACATGCAAAAAATGGAATGCTTTGTTCA 118 Query 118 GAAAGCCAGAGCTTTAAGAAGATGCACATACGGAAAGAAGAAGAAGCAGCAAGGGAATTA 177 |||||| ||| |||| ||||||||| || ||||||||||||||||| ||| ||||||| Sbjct 119 -AAAGCCGGAGTTTTACGAAGATGCATATTGGGAAAGAAGAAGAAGCATCAAAGGAATTA 177 Query 178 GGAGAGAATCGAATGATTGTGATGATGGATTACAACGTTTATTTAATGGGCATCATCGTC 237 ||||||| ||| ||||| ||||||||||||| ||| |||||||||||||||||||||||| Sbjct 178 GGAGAGACTCGGATGATCGTGATGATGGATTGCAATGTTTATTTAATGGGCATCATCGTC 237 Query 238 AACGAAAA-CCTATCCATAAAGTCTCTAGGTAAACTTACTTGCCTACATGGTTCTA-AAC 295 || ||||| || ||||||| ||||| |||||||||||||||| ||||||| ||| | ||| Sbjct 238 AATGAAAATCC-ATCCATAGAGTCTTTAGGTAAACTTACTTGTCTACATGATTC-AGAAC 295 Query 296 AAGTCAAGATATCTCAAGTCTTTCATTGTGAGGGTTTATTATTATGCATCTTAAAAGACG 355 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct 296 AAGTCAAGATATCTCAAGTCTTTCATTGTGAGGGTTTATTACTATGCATCTTAAAAGTTG 355 Query 356 ATGATACTAAGATTGTGGTTTTGAATCCGTATTTGGGGCAAACAAGGTGGATCCAAACCA 415 || |||||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct 356 ATAATACTAAGATTGTGGTTTGGAATCCGTATCTGGGGCAAACAAGGTGGATCCAAACCG 415 Query 416 GAAAGTATCACCGTACAAGTGAATGGG-AAGGACGAGATGTTTATAACTATGCTCTCCGA 474 ||||| || ||| | |||||| ||||| || || ||||||||| || || |||||| || Sbjct 416 GAAAGCATTACCATGCAAGTGGATGGGTAA-CACTAGATGTTTACAATTACGCTCTCGGA 474 Query 475 TACGAAACTAACAGTGGAAACCGTAGCCCCAAAATCTTGAGGTTTATAGATGATTTCCAT 534 ||||||| ||| |||| ||| ||||||| ||||||||||||||||| | | ||||||||| Sbjct 475 TACGAAAATAATAGTGAAAATCGTAGCCTCAAAATCTTGAGGTTTACAAAAGATTTCCAT 534 Query 535 CACCAC---CCCGAAAACCCCGCTTTACGATATGAAACCTACGATTTTGATACTGATTTA 591 | ||| ||||||||| ||||||| | ||||||| ||| |||||||||||||||||| Sbjct 535 TATCACTTTCCCGAAAACGTCGCTTTATGGTATGAAATCTATGATTTTGATACTGATTTA 594 Query 592 TGGACTACTCTTGATGTCTCTCCACACTGGCGGATAATATCTCGCTGTGGTGGTGTTTCT 651 |||||||||||||||||||||||||||||||||||||||||| ||||||| | || || Sbjct 595 TGGACTACTCTTGATGTCTCTCCACACTGGCGGATAATATCTAACTGTGGTC-T-TT-CT 651 Query 652 CTTAATGGAAACACTTATTGGGGCGCTGTAGAACGAAACGCATCTGCATATATTGGTCAT 711 || || ||||||||||| ||||||||||||||||| || ||||| ||| || ||| Sbjct 652 CTCAAGGGAAACACTTACTGGGGCGCTGTAGAACGGAATGCATCCGCACAT------CAT 705 Query 712 ATGATCTGCTTTGATTTTACAAGAGG-AGGATTTGGACCGCTTATACCTCTGCCGTTTAA 770 || || || ||||||||||||| ||| || ||||||||||||| |||||||||||||||| Sbjct 706 ATAATTTGTTTTGATTTTACAATAGGGAG-ATTTGGACCGCTTCTACCTCTGCCGTTTAA 764 Query 771 GGCTAGGGGTTTAGTTTTTGCGCCACTATCTTCGGATAGAGCA-GAGAAGATCGCGGCTT 829 ||| ||||||| || ||||| |||||||||||||| ||||| | ||||||||||| |||| Sbjct 765 GGCGAGGGGTTCAGATTTTGTGCCACTATCTTCGGTTAGAG-ATGAGAAGATCGCAGCTT 823 Query 830 TATTTCGGACAAGCAAAAAGGTTGTGATATGGATTACGACTAAGATTGATG---CCACAA 886 |||||||| ||||| ||||||||| |||||||||||||||||| ||||||| ||| || Sbjct 824 TATTTCGGGCAAGCGAAAAGGTTGAGATATGGATTACGACTAATATTGATGATGCCAAAA 883 Query 887 ATGTAACTTGGAGCAA-TTTCTTCACAATATATATATCGA-ACCTTGAGC-GAAATCTTT 943 |||| | |||||||| ||| || ||| || ||||| | | ||||||| | ||| ||||| Sbjct 884 ATGTGTCCTGGAGCAAGTTTGTT-ACACTAAATATACC-ATACCTTGACCAGAA-TCTTT 940 Query 944 CATGTAAGAGTTTCTTCA 961 ||| |||||||||| ||| Sbjct 941 CATATAAGAGTTTCCTCA 958 > Ahg908078 jgi|Araly1|908078|Al_scaffold_0002_1159 Length=1608 Score = 824 bits (446), Expect = 0.0 Identities = 786/944 (83%), Gaps = 47/944 (5%) Strand=Plus/Plus Query 46 ATTGTCTCTAGGGTT-CCTTTACATTGTTTGAGAGCAATGCGATTAACTTGCAAAAACTG 104 |||||||||| |||| |||| | ||| | ||||| || |||||||||||||||||| || Sbjct 457 ATTGTCTCTATGGTTCCCTTGAAATT-TATGAGATCAGTGCGATTAACTTGCAAAAGGTG 515 Query 105 GAATGCTTTGTT-AGAAAGCCAGAGCTTTAAGAAGATGCACATACGGAAAGAAGAAGAAG 163 ||| | |||||| | |||||| |||||||| |||||||||||| || | |||||| || Sbjct 516 GAACGGTTTGTTCA-AAAGCCGGAGCTTTATGAAGATGCACAT--TGACA-AAGAAGCAG 571 Query 164 CAGCAAGGGAATTAGGAGAGAATCGAATGATTGTGATGATGGATTACAACGTTTATTTAA 223 |||||||||||||||| |||| ||| ||||| ||||||||||||||||| |||||||||| Sbjct 572 CAGCAAGGGAATTAGGGGAGACTCGGATGATCGTGATGATGGATTACAATGTTTATTTAA 631 Query 224 TGGGCATCATCGTCAACGAAAA-CCTATCCATAAAGTCTCTAGGTAAACTTACTTGCCTA 282 |||| || ||||||| ||||| | ||||| | |||||||||||||||||||||||||| Sbjct 632 TGGGAATTGTCGTCAATGAAAATAC-ATCCACAGAGTCTCTAGGTAAACTTACTTGCCTA 690 Query 283 CATGGTTCTA-AACAAGTCAAGATATCTCAAGTCTTTCATTGTGAGGGTTTATTATTATG 341 | | ||| | |||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 691 GACGATTC-AGAACAAGTCAAGATATCTCAAGTCTTTCATTGTGACGGTTTATTGTTATG 749 Query 342 CATCTTAAAAGACGATGATACTAAGATTGTGGTTTTGAATCCGTATTTGGGGCAAACAAG 401 |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 750 CATCTTGAAAGACGATGATACTAAGATTGTGGTTTGGAATCCGTATTTGGGGCAAACAAG 809 Query 402 GTGGATCCAAACCAGAAAGTATCACCGTACAAGTGAATGGGAAGGACGAGATGTTTATAA 461 ||||||||||||||||||||| |||| | ||| ||| ||||||||||| |||| | Sbjct 810 ATGGATCCAAACCAGAAAGTATTACCGCGCTGGTGGCTGGAAAGGACGAGATATTTACAT 869 Query 462 CTATGCTCTCCGATACGAAACTAACAGTGGAAA-C----C--GT---AGCCCCAAAATCT 511 || |||||| ||| | ||| ||| || ||| | | || ||||||||||||| Sbjct 870 GTACGCTCTCGGATTCAAAAATAATAGCA-AAAGCAGATCTTGTCGCAGCCCCAAAATCT 928 Query 512 TGAGGTTTATAGATGATTTCCATCACCACCCCGAAAACCCCGCTTTACGATATGAAACCT 571 |||||||||||||||||||| | | | ||||| || ||||||||||| ||||||| || Sbjct 929 TGAGGTTTATAGATGATTTCAAACTTCGGCCCGAGAATCCCGCTTTACGGTATGAAATCT 988 Query 572 ACGATTTTGATACTGATTTATGGACTACTCTTGATGTCTCTCCACACTGGCGGATAATAT 631 ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct 989 ACGATTTTGATTCTGATTTATGGACCACTCTTGATGTCTCTCCACACTGGCGTATAATGT 1048 Query 632 CTC-GCTGTGGTGGTGTTTCTCTTAATGGAAACACTTATTGGGGCGCTGTAGAACGAAAC 690 ||| || |||| | || |||| || ||||||||||| ||||| ||||||||||| || Sbjct 1049 CTCAGC-GTGGCC-T-TT-CTCTCAAGGGAAACACTTACTGGGGTGCTGTAGAACGGAAT 1104 Query 691 GCAT-CTGCATATATTGGTCATATGATCTGCTTTGATTTTACAAGAG-GAGGATTTGGAC 748 | || | ||| |||| ||||||| ||||| |||||||||||||||| ||| |||||||| Sbjct 1105 GAATAC-GCACCTATTAGTCATATAATCTGTTTTGATTTTACAAGAGAGAG-ATTTGGAC 1162 Query 749 CGCTTATACCTCTGCCGTTTAAG-GCTAGGGGTTTAGTTTTTGCGCCACTATCTTCGGAT 807 ||||| | |||||||| |||| | ||| ||||| || |||||| |||||||||||| | Sbjct 1163 CGCTTTTGCCTCTGCCATTTA-GTGCTTGGGGTGCAGAGTTTGCGTCACTATCTTCGGTT 1221 Query 808 AGAGCAGAGAAGATCGCGGCTTTATTTCGGACAAGC-AAA-A---AGGTT-GTGATATGG 861 |||| |||||||||||| |||||||||| ||||||| ||| | | ||| | ||||||| Sbjct 1222 AGAGAAGAGAAGATCGCTGCTTTATTTCAGACAAGCGAAACATTTAAGTTTGAGATATGG 1281 Query 862 ATTACGACTAAGATTGATGCC-ACAAATGTAACTTGGAGCA-ATTTCTTCACAATATATA 919 ||||| ||||||||||| || | |||||| | ||||||| ||| ||||||||| ||| Sbjct 1282 ATTACAACTAAGATTGAGGCTGA-AAATGTGTCGTGGAGCAGATT-CTTCACAATGGATA 1339 Query 920 TATCGA-ACCTTGAGC-GAAATCTTTCATGTAAGAGTTTCTTCA 961 ||| | ||||||| | | || || |||| |||||||||||||| Sbjct 1340 CATC-ATACCTTGA-CAGTAAGCTCTCATATAAGAGTTTCTTCA 1381 Score = 237 bits (128), Expect = 2e-61 Identities = 242/293 (83%), Gaps = 23/293 (8%) Strand=Plus/Plus Query 955 TTCTTCACAATATATATATCGA-ACCTTGAGC-GAAATCTTTCATGTAAGAGTTTCTTCA 1012 ||||||||||| ||| ||| | ||||||| | | || || |||| |||||||||||||| Sbjct 1324 TTCTTCACAATGGATACATC-ATACCTTGA-CAGTAAGCTCTCATATAAGAGTTTCTTCA 1381 Query 1013 TTGAC-ATGGAGAAGAAAGTTGCTATGGTTTTTGATaaagaaaaaggaaaaa-aa-GT-C 1068 ||||| | |||||||||||||||| ||||||||| ||| || ||||||||| || | | Sbjct 1382 TTGACGA-GGAGAAGAAAGTTGCTGTGGTTTTTG--AAA-AAGAAGGAAAAACAATATGC 1437 Query 1069 G--CTCA--CA--ACATTATTAATATCATTGGAGAGGCTGGATGCGTGAGGAAATTGGTT 1122 | |||| || ||| ||| |||||||||||||||| ||||||| | | |||||||| Sbjct 1438 GACCTCACTCATGACACTATAAATATCATTGGAGAGGATGGATGCATAATGAAATTGGAG 1497 Query 1123 CTTAAAGAATCTGGAGACAAAAGCTGTTGGCCACTTGTGTGCTCTTATGTTCCAAGTACA 1182 ||| |||| | | |||||||| |||||||||||||||||||||||||||||||||| | Sbjct 1498 CTTGGAGAACCCGCAGACAAAAACTGTTGGCCACTTGTGTGCTCTTATGTTCCAAGTGTA 1557 Query 1183 GTGCAAATCAAGCAACATAATAG-AGGCAAAAGGCaaa-aa-aaaGTGATTAG 1232 ||||||||||||| |||||| || |||||||||| ||| || |||| |||||| Sbjct 1558 GTGCAAATCAAGCTACATAA-AGGAGGCAAAAGG-AAAGAACAAAGCGATTAG 1608 > Ahg925743 jgi|Araly1|925743|scaffold_201304.1 Length=1229 Score = 761 bits (412), Expect = 0.0 Identities = 802/982 (82%), Gaps = 60/982 (6%) Strand=Plus/Plus Query 13 ATGTCAAATCTTCCAAAGGAACTAGTAGAGGACATTGTCTCTAGGGTTCCTTT-ACATTG 71 |||||||||||||||||||| | |||||||| ||| |||| ||||||||||| | | || Sbjct 31 ATGTCAAATCTTCCAAAGGATTTGGTAGAGGAGATTATCTCAAGGGTTCCTTTGA-AATG 89 Query 72 TTTGAGAGCAATGCGATTAACTTGCAAAAACTGGAATGCTTTGTT-AGAAAGCCAGAGCT 130 ||||||| |||| ||||||||||||||||| ||||| |||||||| | |||||| ||||| Sbjct 90 TTTGAGATCAATACGATTAACTTGCAAAAAGTGGAACGCTTTGTTCA-AAAGCCGGAGCT 148 Query 131 TTAAGAAGATGCACA-T-ACGGAAAGAAGAAG-AAGCAGCAAGGGAATTAGGAG-AGAAT 186 ||| || |||||||| | || |||||||||| || || ||||||||||||| | ||| | Sbjct 149 TTACGACGATGCACATTGAC--AAAGAAGAAGCAA-CATCAAGGGAATTAGG-GCAGACT 204 Query 187 CGA-ATGATTGTGATGATGGATTACAACGTTTATTTAATGGGCATCATCGTCAACGAAAA 245 | | ||||| ||||||||||||||||| ||||||||||||||||| || || | ||||| Sbjct 205 C-AGATGATCGTGATGATGGATTACAATGTTTATTTAATGGGCATGGTCCTCGATGAAAA 263 Query 246 -CCTATCCATAA-AGTCTCTAGGTAAACTTACTTGCCTACATGGTTCTAAACAAGTCAAG 303 ||| |||| || ||| |||||||||||||||||||||| ||| | | |||||||||||| Sbjct 264 TCCT-TCCA-AAGAGTTTCTAGGTAAACTTACTTGCCTAGATGATACAAAACAAGTCAAG 321 Query 304 ATATCTCAAGTCTTTCATTGTGAGGGTTTATTATTATGCATCTTAAAAGACGATGATACT 363 |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct 322 ATATCTCAAGTCTTTCATTGTGAGGGTTTATTGTTATGCATCTTGAAAGACGATGATACT 381 Query 364 AAGATTGTGGTTTTGAATCCGTATTTGGGGCAAACAAGGTGGATCCAAACCAGAAAGTAT 423 ||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||| Sbjct 382 AAGATTGTGGTTTGGAATCCGTATTTGGGGCAAACAAGATGGATCCAAACCAGAATGTAT 441 Query 424 CACCGTACAAGTGAATGGGAAGGACGAGATGTTTATAACTATGCTCTCCGATACGAAACT 483 || | | |||| |||| |||||||| | | | | || |||||| ||||||||| | Sbjct 442 GACGGCGCTAGTGGATGGAAAGGACGAAA-G---A-AG-TACGCTCTCGGATACGAAAAT 495 Query 484 AACAGTGGAAAC----C-----GTAGCCCCAAAATCTTGAGGTTTATAGATGATTTCCAT 534 || |||| |||| | |||||||||||||||||||| |||||||| ||||| | Sbjct 496 AATAGTGAAAACAGATCTTCTTGTAGCCCCAAAATCTTGAGGGTTATAGATAATTTCAAC 555 Query 535 CACCACCCCGAAAACCCCGCTTTACG-ATATGAAACCTACGATTTTGATACTGATTTATG 593 | | || ||||| || |||| | |||||||| ||| ||||||||| |||||||||| Sbjct 556 CTTTTCACCAAAAACACCATTTTA-GTATATGAAATCTATGATTTTGATTCTGATTTATG 614 Query 594 GACTACTCTTGATGTCTCTCCACACTGGCGGATAATATCTCG-CTGTGGTGGTGTTTCTC 652 |||||||||||||||||||||||| ||| | |||| |||| | | || | || ||| Sbjct 615 GACTACTCTTGATGTCTCTCCACAATGGTGTATAAGGTCTCAAC-GAGGCC-T-TT-CTC 670 Query 653 TTAATGGAAACACTTATTGGGGCGCTGTAGAACGAAACGCAT-CTGCATATATTGGTCAT 711 | || ||||||||||| ||||| ||| |||||| |||| | | | |||| |||| Sbjct 671 TCAAGGGAAACACTTACTGGGGTGCTAAAGAACGGCGCGCACACGG-ACCCATTGATCAT 729 Query 712 ATGATCTGCTTTGATTTTACAAGAG-GAGGATTTGGACCGCTTATACCTCTGCCGTTTAA 770 || || || |||||||||||||||| ||| ||||||||||||| | |||||||| |||| Sbjct 730 ATAATTTGTTTTGATTTTACAAGAGAGAG-ATTTGGACCGCTTCTGCCTCTGCCATTTA- 787 Query 771 G-GCTAGGGGTTTA-GTTTTTGCGCCACTATCTTCGGATAGAGCAGAGAAGATCGCGGCT 828 | ||| ||||| | | ||| ||| |||||||||||| ||||| ||| |||||| | ||| Sbjct 788 GTGCTTGGGGTGCACGGTTT-GCGTCACTATCTTCGGTTAGAGAAGAAAAGATCACTGCT 846 Query 829 TTATTTCGGACAAGC-AAA-A-AGG--TT-GTGATATGGATTACGACTAAGATTGATGCC 882 ||||||| || |||| ||| | | || | ||||||||||||||||| |||||| ||| Sbjct 847 TTATTTCAGAAAAGCGAAACATATAAATTTGAGATATGGATTACGACTACGATTGAGGCC 906 Query 883 A-CAAATGTAACTTGGAGCAATTTCTTCACAATATATATATCGA-ACCTTGAGCGAAAT- 939 | ||| ||| || ||||||||||||||||| || ||| || | ||||||| | |||| Sbjct 907 AACAA-TGTGACGTGGAGCAATTTCTTCACGATGGATACATT-ATACCTTGACC-AAATG 963 Query 940 CTTTCATGTAAGAGTTTCTTCA 961 |||| || |||||||||||||| Sbjct 964 CTTTTATATAAGAGTTTCTTCA 985 > Ahg925736 jgi|Araly1|925736|scaffold_201297.1 Length=1231 Score = 202 bits (109), Expect = 6e-51 Identities = 206/250 (82%), Gaps = 17/250 (7%) Strand=Plus/Plus Query 999 TAAGAGTTTCTTCATTGA-CATGGAGAAGA-AAGTTGCTATGGTTTTTGATaaagaaaaa 1056 |||||||||||||||||| | |||||| | |||||||| | |||||||| |||| || Sbjct 983 TAAGAGTTTCTTCATTGAGGA-GGAGAA-ACAAGTTGCTGTTGTTTTTGACAAAG---AA 1037 Query 1057 ggaaaaaaaGTCGCTCACAACATTATTAATATCATTGGAGAGGCTGGATGCGTGAGGAAA 1116 || |||||| || | | | | |||| ||||||||||||||||||||||| |||||||| Sbjct 1038 GG-AAAAAA-TCTAT-GCGATACTATTCATATCATTGGAGAGGCTGGATGCTTGAGGAAA 1094 Query 1117 TTGGTTCTTAAAGAATCTGGAG-ACAAAAGCTGTTGGCCACTTGTGTGCTCTTATGTTCC 1175 ||| ||| |||| | || | ||||| |||| |||||||||||||||||||||||| Sbjct 1095 GTGGAGCTTGGAGAACCCACAGAAAAAAAG-TGTTTGCCACTTGTGTGCTCTTATGTTCC 1153 Query 1176 AAGTACAGTGCAAATCAAGCAACATAATAGA-GGCAAAAGGCaaa-aa-aaaGTGATTAG 1232 ||||| |||||||||||||| |||||| ||| ||||||||| ||| || |||| |||||| Sbjct 1154 AAGTATAGTGCAAATCAAGCTACATAA-AGAAGGCAAAAGG-AAAGAACAAAGCGATTAG 1211 Query 1233 GAAAGGCATC 1242 ||||| |||| Sbjct 1212 GAAAGACATC 1221 > Ahg930411 jgi|Araly1|930411|scaffold_302868.1 Length=1141 Score = 176 bits (95), Expect = 3e-43 Identities = 447/607 (74%), Gaps = 63/607 (10%) Strand=Plus/Plus Query 190 ATGATTGTGATGATGGATTACAA-CGTTTATTTAATGGGCATCA-TCGTCAA-CGAAAAC 246 ||||| |||||||||| | |||| | ||||||||| | |||| | || |||| || ||| Sbjct 69 ATGATCGTGATGATGGGTAACAATC-TTTATTTAACGAGCATTACTC-TCAATGGAGAAC 126 Query 247 CTATCCATAAAGTC-TCTAGGTAAACTTACTTGCCTACATGGTTCTAAACAAGTCAAGAT 305 | ||| || || | ||| |||||||||||||| | | | |||||| |||||| Sbjct 127 C-ATCTATTGAG-CAAATAGACAAACTTACTTGCCT---T-G-AC-GAACAAGCCAAGAT 178 Query 306 ATCTCAAGTCTTTCATTGTGAGGGTTTATTATTATGCATCTTAAAAGACGATGATACTAA 365 ||| || |||||| | || ||||| ||||| ||||||| || ||||| | ||| ||| Sbjct 179 ATCACAGGTCTTTGACTGCGAGGGCTTATTGCTATGCATATTGAAAGA--A-GATTCTAG 235 Query 366 GATTGTGGTTTTGAATCCGTATTTGGGGCAAACAAGGTGGATCCAAACCA-GAAAGTATC 424 | |||||||| |||||||||||||||||||||||||||||||| || ||| || | | | Sbjct 236 GTTTGTGGTTCTGAATCCGTATTTGGGGCAAACAAGGTGGATCGAA-CCAAGATATTCCC 294 Query 425 ACCGTACAAGTGAATGGGAAG-GACGAGATGTTTA-TAACTATGCTCTCCGATACGA-AA 481 | ||| || | | || | | ||| || ||||| | ||||||||| |||||| || Sbjct 295 ATCGTCCA--T-AC-GG-ATGTGAC-AG--GTTTAGT---TATGCTCTCGGATACGTGAA 343 Query 482 CTAAC-AGTGGAAACCGTAGCCCCAAAATCTTGAGGTTTATAGATGATTTCCATCACC-- 538 ||| | | | ||||| ||| | ||||||||||||||| ||||| | || Sbjct 344 -TAAGGAATCTTGTC-GTAGCTACAAGTTATTGAGGTTTATAGATTATTTCTA-CAATGT 400 Query 539 ACCCCGAAAACCCCG--CTTTACGATATGAAACCTACGATTTTGA-TACTGATTTATGGA 595 |||| ||||| | | |||| | ||||||| ||| |||||||| | |||||||||||| Sbjct 401 ACCC-GAAAAGCA-GTTCTTTTGG-TATGAAATCTATGATTTTGACT-CTGATTTATGGA 456 Query 596 CTACTCTTGATGTCTCTCCACACTGGCGGATAATATCTCGCTGTG-GTGGTGTTTCTCTT 654 | ||||||||| | |||||||| ||||| ||| || | | | |||| ||||||||| Sbjct 457 CGACTCTTGATATATCTCCACATTGGCGTATAGCATTTTG-TAACCGTGGCGTTTCTCTT 515 Query 655 AATGGAAACACTTA-TTGGG-GC-GCTGTA-G-AACGAA-ACGCATCTGCATATATTGGT 708 || ||||||||||| || | || |||| | | |||| | | | | | | | |||| Sbjct 516 AAGGGAAACACTTACTTTTGTGCTGCTGAAAGGAACGTAGATGTAAAAGAAG-TCTTGGC 574 Query 709 CA-TA--TGA-TCTGCTTT-GATTTTACAAGAG-GAGGATTTGGACCGCTTATACCTCTG 762 || || | | |||| ||| ||||||||||| | ||| |||||| |||||| | |||||| Sbjct 575 CAATAGCTTAATCTG-TTTCGATTTTACAAGTGAGAG-ATTTGGTCCGCTTCTGCCTCTG 632 Query 763 CCGTTTA 769 ||||||| Sbjct 633 CCGTTTA 639 > Ahg479757 jgi|Araly1|479757|fgenesh2_kg.3__2458__AT3G22421.1 Length=1236 Score = 154 bits (83), Expect = 2e-36 Identities = 221/284 (78%), Gaps = 23/284 (8%) Strand=Plus/Plus Query 150 GAAAGAAGAAGAAGCAGCAAGGGAATTAGGAGAGAATCGAATGATTGTGATGATGGATTA 209 ||||||||||| |||||||| || | ||||||| ||| ||||| ||| |||||||| | Sbjct 141 GAAAGAAGAAGCAGCAGCAAAGG-A--AGGAGAGTCTCGGATGATCGTGTTGATGGATAA 197 Query 210 CAA-CGTTTATTTAATGGGCATCATCGTCAA-CGAA--AAC-CT-ATCCA--T--AAAGT 259 ||| | | | || | || ||||| || |||| ||| || | ||||| | | || Sbjct 198 CAATC-TGTGTTCAGTGAGCATCTTCTTCAATGGAATTGACATTGATCCATCTGCAGAG- 255 Query 260 C-TCTAGGTAAACTTACTTGCC--TAC-ATGGTTCTA-AACAAGTCAAGATATCTCAAGT 314 | ||||||||||||||||| ||| ||| ||| | |||||||||||||||||||||| Sbjct 256 CAAAAAGGTAAACTTACTTGCCTATACGATGATTC-AGAACAAGTCAAGATATCTCAAGT 314 Query 315 CTTTCATTGTGAGGGTTTATTATTATGCATCTTAAAAGACGATGATACTAAGA-TTGTGG 373 |||||| || |||||||| ||| ||||| || | ||||||||| | || | |||| | Sbjct 315 CTTTCACTGCGAGGGTTTGTTACTATGCGTCATCAAAGACGATAAGGGTA-GTCTTGTTG 373 Query 374 TTTTGAATCCGTATTTGGGGCAAACAAGGTGGATCCAAACCAGA 417 ||| ||||||||||||||| ||||||||||||||| || ||||| Sbjct 374 TTTGGAATCCGTATTTGGGACAAACAAGGTGGATCGAACCCAGA 417 > Ahg482868 jgi|Araly1|482868|fgenesh2_kg.4__1928__AT2G38590.1 Length=973 Score = 104 bits (56), Expect = 2e-21 Identities = 71/78 (91%), Gaps = 2/78 (3%) Strand=Plus/Plus Query 293 AACAAGTCAAGATATCTCAAGTCTTTCATTGTGAGGGTTTATTATTATGCATCTTAAAAG 352 |||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||| Sbjct 326 AACAAGTCAAGATATCTCAAGTCTTTCACTGTGAGGGTTTATTGTTATGCATCTTGAAAG 385 Query 353 ACGATGATACTAAG-ATT 369 | || ||||| ||| ||| Sbjct 386 AAGACGATAC-AAGGATT 402 > Ahg342698 jgi|Araly1|342698|fgenesh1_pg.C_scaffold_3002461 Length=1110 Score = 75.0 bits (40), Expect = 1e-12 Identities = 145/193 (75%), Gaps = 18/193 (9%) Strand=Plus/Plus Query 1002 GAGTTTCTTCATTGAC-ATGGAGAAGAAAGTTGCTATGGTTTTTGATaaagaaaaaggaa 1060 |||||||||||||||| | |||||||||||| ||| ||||||||||| ||| | | Sbjct 921 GAGTTTCTTCATTGACGA-GGAGAAGAAAGTCGCTGTGGTTTTTGAT----AAATACTAC 975 Query 1061 aaaaaGTCGCTCACAACATTA--TTAATATCATTGGAGAGGCTGGATGCGT-GAGGAAAT 1117 || | ||| | || || || || | |||||||||| || ||||| | | | | | Sbjct 976 AACGA-TCG-GCGCAGCA-TAGCTT-ACATCATTGGAGTGGATGGATCCTTCAAAG-CAG 1030 Query 1118 TGGTTCTTAAAGAATCTGG-AGAC-AAAAGCTGTTGGCCACTTGTGTGCTCTTATGTTCC 1175 ||| ||| |||||| || | || || | |||| ||||||||||||||||||||||| Sbjct 1031 TGGATCTCGGAGAATC-GGCATACGCAATG-TGTTACCCACTTGTGTGCTCTTATGTTCC 1088 Query 1176 AAGTACAGTGCAA 1188 ||||| ||||||| Sbjct 1089 AAGTATAGTGCAA 1101 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 47996752503 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5