BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G11030.1
Length=2001
Score E
Sequences producing significant alignments: (Bits) Value
Ahg352166 jgi|Araly1|352166|fgenesh1_pg.C_scaffold_6002759 3134 0.0
Ahg492484 jgi|Araly1|492484|fgenesh2_kg.7__1917__AT4G23850.1 1716 0.0
> Ahg352166 jgi|Araly1|352166|fgenesh1_pg.C_scaffold_6002759
Length=2001
Score = 3134 bits (1697), Expect = 0.0
Identities = 1902/2003 (95%), Gaps = 6/2003 (0%)
Strand=Plus/Plus
Query 1 ATGACGTCGCAGAAAAGATTCATCTTT-GAGGTGGAAGCCGCTAAGGAAGCCACAGATGG 59
||||||||||||| ||||||||| ||| |||||||| || |||||||||||||| |||||
Sbjct 1 ATGACGTCGCAGATAAGATTCAT-TTTCGAGGTGGAGGCGGCTAAGGAAGCCACCGATGG 59
Query 60 AAATCCCTCGGTTGGTCCTGTCTATCGTAGTACTTTTGCTC-AGAACGGATTCCCGAACC 118
|||||||||||||||||||| ||||||||||||||||| | || |||| ||||| || |
Sbjct 60 CAATCCCTCGGTTGGTCCTGTGTATCGTAGTACTTTTGC-CAAGGACGGTTTCCCAAATC 118
Query 119 CGATCGATGGTATCCAAAGCTGCTGGGATATTTTCCGCACGGCTGTTGAGAAGTATCCAA 178
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 119 CGATTGATGGAATCCAAAGCTGTTGGGATATTTTCCGCACGGCTGTTGAGAAATATCCAA 178
Query 179 ACAATCGAATGCTTGGTCGCCGTGAGATT-TCGAACGGGAAGGCAGGAAAGTACGTGTGG 237
||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||
Sbjct 179 ACAATCGAATGCTTGGTAGCCGTGAGATTGT-TAACGGGAAGGCAGGAAAGTACGTGTGG 237
Query 238 AAAACATACAAAGAAGTATACGACATTGTCATAAAACTTGGAAATTCTCTACGTAGTTGC 297
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 238 AAAACATACAAAGAAGTATATGACATTGTCATAAAACTTGGAAATTCTCTACGTAGTTGT 297
Query 298 GGGATTAAGGAGGGAGAAAAATGTGGTATATATGGTATAAATTGTTGTGAGTGGATCATT 357
|||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 298 GGGATTCAGGAGGGAGAAAAATGTGGTATTTATGGTATAAACTGTTGTGAGTGGATCATT 357
Query 358 AGCATGGAGGCATGTAATGCACATGGCCTTTATTGTGTCCCTTTATACGATACGTTAGGC 417
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 358 AGCATGGAGGCATGTAATGCACATGGCCTATATTGTGTCCCTTTATACGATACATTAGGC 417
Query 418 GCTGGTGCAGTGGAATTCATCATTTCTCATGCAGAGGTTTCAATTGCTTTCGTGGAGGAG 477
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 418 GCTGGTGCAGTGGAATTCATCATTTCTCATGCAGAGGTTTCAATTGCTTTTGTGGAGGAG 477
Query 478 AAGAAGATCCCTGAGCTTTTTAAGACTTGTCCAAACTCAACAAAATATATGAAGACTGTT 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 478 AAGAAGATCCCTGAGCTTTTTAAGACTTGTCCAAACTCAACAAAATATATGAAGACTGTT 537
Query 538 GTGAGCTTTGGCGGTGTCAAACCGGAACAAAAAGAAGAAGCTGAAAAATTGGGATTGGTA 597
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 538 GTGAGCTTTGGCGGTGTCAAACCCGAACAAAAAGAAGAAGCTGAAAAATTGGGATTGGTA 597
Query 598 ATACATTCGTGGGATGAGTTTTTGAAGCTGGGTGAGGGTAAGCAATATGAGCTTCCCATT 657
|||||||| |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct 598 ATACATTCTTGGGATGAGTTTTTGAAGCTGGGTGAGGATAAGCAATATGATCTTCCTATT 657
Query 658 AAAAAGCCAAGCGACATATGCACGATTATGTATACTAGCGGAACAACTGGTGACCCGAAG 717
||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||| |||
Sbjct 658 AAAAAGCAAAGCGACATATGCACGATTATGTATACTAGTGGAACCACTGGTGACCCTAAG 717
Query 718 GGAGTTATGATTTCAAATGAAAGCATTGTTACTATAACTACTGGAGTGATGCATTTCCTA 777
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 718 GGAGTTTTGATTTCAAATGAAAGCATTGTTACTATAACTACTGGAGTGATGCATTTCCTA 777
Query 778 GGGAATGTGAATGCAAGCCTATCTGAGAAGGATGTGTATATTTCTTATCTTCCTCTCGCG 837
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 778 GGGAATGTGAATGCAAGCCTATCCGAGAAGGATGTGTATATTTCTTATCTCCCTCTCGCG 837
Query 838 CACGTCTTTGATCGGGCAATCGAGGAATGTATTATTCAAGTAGGTGGTTCAATTGGTTTC 897
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 838 CATGTCTTTGATCGGGCTATCGAGGAATGTATTATTCAAGTAGGTGGTTCAATTGGTTTC 897
Query 898 TGGCGCGGGGATGTCAAATTGTTGATTGAAGACCTTGGTGAGCTAAAACCAAGTATCTTT 957
|||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||| |||
Sbjct 898 TGGCGCGGGGATGTAAAATTGTTGATTGAAGACCTTGGTGAGTTAAAACCAACTATTTTT 957
Query 958 TGCGCCGTTCCTCGTGTCCTAGATCGAGTATACACAGGACTACAGCAGAAACTATCTGGT 1017
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct 958 TGCGCCGTTCCCCGTGTCCTAGATCGAGTATACACAGGACTCCAGCAGAAACTATCTGTT 1017
Query 1018 GGTGGTTTCTTCAAAAAGAAGGTGTTTGATGTTGCTTTTTCCTATAAATTTGGAAATATG 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 GGTGGTTTCTTCAAAAAGAAGGTGTTTGATGTTGCTTTTTCCTATAAATTTGGAAATATG 1077
Query 1078 AAGAAAGGACAGTCTCATGTGGCAGCTTCTCCATTTTGTGACAAACTTGTATTCAACAAG 1137
||||| ||||||||||||||||| || |||||||||||||||||| |||||||| ||||
Sbjct 1078 AAGAAGGGACAGTCTCATGTGGCGGCGGCTCCATTTTGTGACAAACATGTATTCAGCAAG 1137
Query 1138 GTTAAACAAGGACTTGGAGGCAATGTGAGGATTATTCTGTCTGGAGCGGCTCCTCTCGCT 1197
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 1138 GTTAAACAAGGACTTGGAGGCAATGTGAGGATTATTCTATCTGGAGCGGCTCCTCTTGCT 1197
Query 1198 AGTCACATAGAATCTTTTCTAAGAGTTGTTGCATGTTGTAATGTTCTACAAGGATATGGT 1257
||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1198 AGTCACATAGAGTCATTTCTAAGAGTTGTGGCATGTTGTAATGTTCTACAAGGATATGGT 1257
Query 1258 CTAACTGAGAGTTGTGCTGGAACTTTTGCAACGTTCCCAGACGAACTAGACATGCTTGGG 1317
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 CTAACTGAGAGCTGTGCTGGAACTTTTGCAACGTTCCCAGACGAACTAGACATGCTTGGA 1317
Query 1318 ACTGTTGGTCCACCCGTGCCAAACGTCGATATACGCCTTGAATCTGTCCCGGAAATGAAT 1377
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1318 ACGGTTGGTCCACCCGTGCCAAACGTCGATATACGCCTTGAATCTGTCCCGGAAATGAAT 1377
Query 1378 TATGATGCTCTTGGAAGTACTCCGCGAGGCGAAATATGCATACGAGGAAAAACTTTATTT 1437
|| ||||||||||| ||||||||||| |||||||| || || || || |||||||| |||
Sbjct 1378 TACGATGCTCTTGGTAGTACTCCGCGTGGCGAAATCTGTATCCGTGGGAAAACTTTGTTT 1437
Query 1438 TCAGGGTACTACAAACGTGAAGACCTCACAAAAGAGGTTTTTATCGACGGATGGTTGCAC 1497
||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||
Sbjct 1438 TCAGGGTACTACAAACGTGAAGACCTCACAAAAGAGGTTCTTATTGATGGATGGTTGCAC 1497
Query 1498 ACAGGTGATGTTGGTGAGTGGCAACCAAATGGAAGCATGAAGATAATTGACCGGAAAAAG 1557
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1498 ACAGGTGATATTGGCGAGTGGCAACCAAATGGAAGCATGAAGATAATTGACCGGAAAAAG 1557
Query 1558 AACATCTTCAAACTCGCGCAAGGAGAGTATGTCGCTGTTGAGAATTTAGAAAATGTCTAC 1617
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1558 AACATCTTCAAACTCGCGCAAGGAGAGTACGTCGCTGTTGAGAATTTAGAAAATGTCTAC 1617
Query 1618 AGTCAAGTAGAAGTTATTGAATCGATATGGGTATATGGAAACAGCTTTGAGTCCTTCCTT 1677
||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||
Sbjct 1618 AGTCAAGTAGAAGTTATTGAATCAATATGGGTGTATGGAAACAGCTTTGAATCCTTCCTT 1677
Query 1678 GTCGCAATCGCTAACCCGGCCCAACAAACTCTTGAACGATGGGCTGTGGAGAATGGAGTG 1737
||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 1678 GTCGCCATCGCTAACCCGGCCCAACAAACTCTTGAGCGATGGGCGGTGGAGAATGGAGTG 1737
Query 1738 AATGGAGACTTCAACTCCATCTGCCAAAACGCAAAGGCAAAAGCATTCATACTTGGAGAA 1797
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct 1738 AATGGAGACTTCAACTCCCTCTGCCAAAACGCAAAGGCAAAAGCATTCATACTTGGTGAA 1797
Query 1798 CTCGTTAAAACAGCCAAAGAGAACAAGTTGAAGGGTTTTGAGATCATAAAAGATGTTCAT 1857
|||||||||| |||||||||||| |||||||||||||||||||||||||||| | |||||
Sbjct 1798 CTCGTTAAAATAGCCAAAGAGAAAAAGTTGAAGGGTTTTGAGATCATAAAAGCTATTCAT 1857
Query 1858 CTGGAACCAGTGGCGTTCGACATGGAACGAGACCTTCTTACTCCAACCTACAAAAAGAAG 1917
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1858 CTGGAACCAGTGGCTTTCGACATGGAAAGAGACCTTCTTACTCCAACCTACAAAAAGAAG 1917
Query 1918 AGGCCTCAATTGCTCAAATACTATCAGAATGTGATCCATGAAATGTACAAGACAACAAAG 1977
||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct 1918 AGGCCTCAATTGCTCAAATACTATCAGAATGTGATAGATGAAATGTACAAGGCAGCAAAG 1977
Query 1978 GAAAGTCTAGCTTCCGGACAGTA 2000
||| ||| |||||| ||||||||
Sbjct 1978 GAAGGTCAAGCTTCAGGACAGTA 2000
> Ahg492484 jgi|Araly1|492484|fgenesh2_kg.7__1917__AT4G23850.1
Length=2215
Score = 1716 bits (929), Expect = 0.0
Identities = 1594/1914 (83%), Gaps = 50/1914 (3%)
Strand=Plus/Plus
Query 104 ACGGA-TTCCCGAACCCGATCGATGGTATCCAAAGCTGCTGGGATATTTTCCGCACGGCT 162
||||| |||||| | |||||||| || || | || || |||||| ||||||| | | ||
Sbjct 143 ACGGATTTCCCG-AGCCGATCGAAGGAATGGATAGTTGTTGGGATGTTTTCCGTATGTCT 201
Query 163 GTTGAGAAGTATCCAAACAATCGAATGCTTGGTCGCCGTGAGATT-TCGAACGGGAAGGC 221
|||||||| ||||||||||||| |||||| || |||||||||||| | | |||||||| |
Sbjct 202 GTTGAGAAATATCCAAACAATCCAATGCTGGGACGCCGTGAGATTGTAG-ACGGGAAGCC 260
Query 222 AGGAAAGTACGTGTGGAAAACATACAAAGAAGTATACGACATTGTCATAAAACTTGGAAA 281
|| ||||| || ||| |||||||| ||||||| ||||||||||||||||||||||||||
Sbjct 261 GGGTAAGTATGTCTGGCAAACATACCAAGAAGTCTACGACATTGTCATAAAACTTGGAAA 320
Query 282 TTCTCTACGTAGTTGCGGGA-TTAAGGAGGGAGAAAAATGTGGTATATATGGTATAAATT 340
|||||| || || || ||| ||||||| | || |||||||||||| |||||| |||||
Sbjct 321 TTCTCTCCGAAG-TGTTGGAGTTAAGGACGAAGCAAAATGTGGTATCTATGGTGCAAATT 379
Query 341 GTTGTGAGTGGATCATTAGCATGGAGGCATGTAATGCACATGGCCTTTATTGTGTCCCTT 400
| ||||||||| || ||||||||||| |||||||||||||| || |||||||| || |
Sbjct 380 CTCCTGAGTGGATTATCAGCATGGAGGCTTGTAATGCACATGGACTCTATTGTGTACCGT 439
Query 401 TATACGATACGTTAGGCGCTGGTGCAGTGGAATTCATCATTTCTCATGCAGAGGTTTCAA 460
|||| ||||| |||| ||| |||| ||||||||||| ||||| ||| ||||||||||||
Sbjct 440 TATATGATACACTAGGTGCTAGTGCTGTGGAATTCATTATTTCCCATTCAGAGGTTTCAA 499
Query 461 TTGCTTTCGTGGAGGAGAAGAAGATCCCTGAGCTT-TTTAAGACTTGTCCAAACTCAACA 519
||| ||| ||||| |||||||||||| ||||| || |||||||| || |||||||| |||
Sbjct 500 TTGTTTTTGTGGAAGAGAAGAAGATCTCTGAG-TTGTTTAAGACATGCCCAAACTCGACA 558
Query 520 AAATATATGAAGACTGTTGTGAGCTTTGGCGGTGTCAAACCG-GAACAAAAAGAAGAAGC 578
| || ||||| |||||||||||||| || |||||| | || |||||||||||||||||
Sbjct 559 GAGTACATGAAAACTGTTGTGAGCTTCGGTGGTGTCTCA-CGTGAACAAAAAGAAGAAGC 617
Query 579 TGAAA-AATTGGGATTGGTAATACATTCGTGGGATGAGTTTTTGAAGCTGGGTGAGGGTA 637
||||| ||||| ||||| ||| || | |||||||| ||||||||||||||||| || |
Sbjct 618 TGAAACTTTTGGG-TTGGTTATATATGCTTGGGATGAATTTTTGAAGCTGGGTGAAGGAA 676
Query 638 AGCAATATGAGCTTCCCATTAAAAAGCCAAGCGACATATGCACGATTATGTATACTAGCG 697
|||||||||| || ||||| |||||| ||| ||||| ||||||||||||||||| || |
Sbjct 677 AGCAATATGATCTCCCCATCAAAAAGAAAAGTGACATTTGCACGATTATGTATACGAGTG 736
Query 698 GAACAACTGGTGACCCGAAGGGAGTTATGATTTCAAATGAAAGCATTGTTACTATAACT- 756
|||| ||||||||||| |||||||| ||||| || || ||||||||||||||| ||| |
Sbjct 737 GAACCACTGGTGACCCAAAGGGAGTGATGATATCTAACGAAAGCATTGTTACTCTAA-TC 795
Query 757 ACTGGAGTGATGCATTTCCTAGGGAATGTG--AATGCAAGC-CT-ATCTGAGAAGGATGT 812
|||||||||| | | | || | || ||| || | ||| || | ||| ||| |||||
Sbjct 796 GCTGGAGTGATCCGTCTACT--GAAAAGTGCTAACG-TAGCTCTGA-CTGTGAAAGATGT 851
Query 813 GTATATTTCTTATCTTCCTCTCGCGCACGTCTTTGATCGGGCAATCGAGGAATGTATT-A 871
|| | |||||||||||||||| || ||| ||||||| || | |||||||| ||| || |
Sbjct 852 GTTTCTTTCTTATCTTCCTCTTGCCCACATCTTTGACCGAGTGATCGAGGAGTGT-TTCA 910
Query 872 TTCAAGTA-GGTGGTTCAATTGGTTTCTGGCGCGGGGATGTCAAATTGTTGATTGAAGAC 930
||||| | |||| | ||||||| |||||||| |||||||| ||||||||||||||||||
Sbjct 911 TTCAA-CATGGTGCTGCAATTGGCTTCTGGCGTGGGGATGTAAAATTGTTGATTGAAGAC 969
Query 931 CTTGGTGAGCTAAAACCAAGTATCTTTTGCGCCGTTCCTCGTGTCCTAGATCGAGTATAC 990
||||||||||| ||||||| ||| ||||| || || ||||||||||| ||| ||||||||
Sbjct 970 CTTGGTGAGCTTAAACCAACTATTTTTTGTGCTGTACCTCGTGTCCTCGATAGAGTATAC 1029
Query 991 ACAGGACTACAGCAGAAACTATCTGGTGGTGGTTTCTTCAAAAAGAAGGTGTTTGATGT- 1049
|||| || ||| |||| || |||| |||||| ||||| |||||| | |||||||| |
Sbjct 1030 TCAGGTCTTCAGAAGAAGCTTTCTGATGGTGGATTCTTAAAAAAGTTGTTGTTTGAT-TC 1088
Query 1050 TGCTTTTTCCTATAAATTTGGAAATATGAAGAAAGGACAGTCTCATGTGGCA-GCTTCTC 1108
||| |||||||||||||||||| |||||||||| ||| ||||||||| || | || ||||
Sbjct 1089 TGCATTTTCCTATAAATTTGGACATATGAAGAAGGGAAAGTCTCATGCGG-AGGCCTCTC 1147
Query 1109 CATTTTGTGACAAACTTGTATTCAACAAGGTTAAACAAGGACTTGGAGGCAATGTGAGGA 1168
|| |||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||
Sbjct 1148 CACTTTGTGACAAACATGTATTCAGCAAGGTTAAACAAGGACTCGGAGGCAATGTAAGGA 1207
Query 1169 TTATTCTGTCTGGAGCGGCTCCTCTCGCTAGTCACATAGAATCTTTTCTAAGAGTTGTTG 1228
||||||| |||||||| |||||||| ||||| ||| |||| || ||||| ||||| || |
Sbjct 1208 TTATTCTATCTGGAGCTGCTCCTCTTGCTAGCCACGTAGAGTCATTTCTTAGAGTGGTGG 1267
Query 1229 CATGTTGTAATGTTCTACAAGGATATGGTCTAACTGAGAGTTGTGCTGGAACTTTTG-CA 1287
|||| ||| ||||| |||||||||| ||||| ||||| || |||||||||||||||| |
Sbjct 1268 CATGCTGTCATGTTTTACAAGGATACGGTCTCACTGAAAGCTGTGCTGGAACTTTTGTC- 1326
Query 1288 ACGTTCCCAGACGAACTAGACATGCTTGGGACTGTTGGTCCACCCGTGCCAAACGTCGAT 1347
|| | ||||||||||| |||||||| || || ||||||||||| ||||||||||| |||
Sbjct 1327 TCGCTGCCAGACGAACTGGACATGCTCGGCACAGTTGGTCCACCAGTGCCAAACGTTGAT 1386
Query 1348 ATACGCCTTGAATCTGTCCCGGAAAT-GAATTATGATGCTCTTGGAAGTACTCCGCGAGG 1406
|||||||||||||||||||| || || ||| ||||||||||||| ||||||||| || ||
Sbjct 1387 ATACGCCTTGAATCTGTCCCCGAGATGGAA-TATGATGCTCTTGCAAGTACTCCACGTGG 1445
Query 1407 CGAAATATGCATACGAGGAAA-AACTTTATTTTCAGGGTACTACAAACGTGAAGACCTCA 1465
||||| ||||| || ||||| | | || || || || ||||||||||||||||||||||
Sbjct 1446 TGAAATCTGCATTCGGGGAAAGACCCTT-TTCTCTGGTTACTACAAACGTGAAGACCTCA 1504
Query 1466 CAAAAGAGGTTTTTATCGACGGATGGTTGCACACAGGTGATGTTGGTGAGTGGCAACCAA 1525
||||||||||| | || || |||||| |||||||||||||||||||||||||||||||||
Sbjct 1505 CAAAAGAGGTTCTCATTGATGGATGGCTGCACACAGGTGATGTTGGTGAGTGGCAACCAA 1564
Query 1526 ATGGAAGCATGAAGATAATTGACCGGAAAAAGAACATCTTCAAACTCG-CGCAAGGAGAG 1584
||||||||||||||||||||||| |||| ||||| ||||| ||||| | | |||||||||
Sbjct 1565 ATGGAAGCATGAAGATAATTGACAGGAAGAAGAATATCTTTAAACT-GTCACAAGGAGAG 1623
Query 1585 TATGTCGCTGTTGAGAATTTAGAAAATGTCTACAGTCAAGTAGAAGTTATTGAATC-GAT 1643
||||| || || ||||| ||||||| |||| || ||||| ||| | |||| || | |
Sbjct 1624 TATGTTGCGGTCGAGAACATAGAAAACATCTATGGTGAAGTACAAGCTGTTGATTCCG-T 1682
Query 1644 ATGGGTATATGGAAACAGCTTTGAGTCCTTCCTTGTCGCAATCGCTAACCCGGCCCAACA 1703
||||| || || |||||||||||||||||||| ||||| ||||| ||||| ||| ||
Sbjct 1683 GTGGGTGTACGGGAACAGCTTTGAGTCCTTCCTAGTCGCTATCGCCAACCCAAACCAGCA 1742
Query 1704 AACTC-TTGAACGATGGGCTGTGGAGAATGGAGTGAATGGAGACTTCAACTC-CATCTGC 1761
|| || ||||||| ||||||| || || || |||| || |||| |||| | | ||||
Sbjct 1743 AA-TCCTTGAACGCTGGGCTGCAGAAAACGGTGTGAGCGGTGACTACAACGCTC-TCTGT 1800
Query 1762 CAAAACGCAAAGGCAAAAGCATT-CATACTTGGAGAACTCGTTAAAACAGCCAAAGAGAA 1820
||||| | ||||||||| | ||| ||||||||||||||| ||||||| |||||||||||
Sbjct 1801 CAAAATGAAAAGGCAAAGG-ATTTCATACTTGGAGAACTTGTTAAAATGGCCAAAGAGAA 1859
Query 1821 CAAGTTGAAGGGTTTTGAGATCATAAAAGATG-TTCATCTGGAACCAGTGGCGTTCGACA 1879
||| ||||||| ||||||||||| || | | ||||||| || |||||| |||| ||||
Sbjct 1860 AAAGATGAAGGGGTTTGAGATCATCAAGGC-GATTCATCTTGACCCAGTGCCGTTTGACA 1918
Query 1880 TGGAACGAGACCTTCTTACTCCAACCTACAAAAAGAAGAGGCCTCAATTGCTCAAATACT 1939
||||||| || |||||||| || |||| ||||||||| |||||||| || || |||||||
Sbjct 1919 TGGAACGCGATCTTCTTACGCCGACCTTCAAAAAGAAAAGGCCTCAGTTACTGAAATACT 1978
Query 1940 ATCAGAATGTGATCCATGAAATGTACAAGACAACAAAGGAAAG-TCTAGCTTCC 1992
| |||| ||||||| |||||||||||||||| ||||| |||| | ||||||||
Sbjct 1979 ACCAGAGTGTGATCGATGAAATGTACAAGACCACAAATGAAAAAT-TAGCTTCC 2031
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75228233875
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5