BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G11470.1 Length=2001 Score E Sequences producing significant alignments: (Bits) Value Ahg895321 jgi|Araly1|895321|Al_scaffold_0006_3317 2394 0.0 Ahg489975 jgi|Araly1|489975|fgenesh2_kg.6__3109__AT4G11480.1 1336 0.0 Ahg895324 jgi|Araly1|895324|Al_scaffold_0006_3320 756 0.0 Ahg489974 jgi|Araly1|489974|fgenesh2_kg.6__3108__AT4G11460.1 736 0.0 > Ahg895321 jgi|Araly1|895321|Al_scaffold_0006_3317 Length=1971 Score = 2394 bits (1296), Expect = 0.0 Identities = 1792/2022 (89%), Gaps = 72/2022 (4%) Strand=Plus/Plus Query 1 ATGTGTT-TGAACACTCTCTGTGCAATCCTCTGTTTTGTCCTT-A-CCGTTAGTTTCGGC 57 |||| || |||||| || | | |||| ||||||||| | ||| | || |||||||||| Sbjct 1 ATGT-TTCTGAACAAACTTTTTTCAATGCTCTGTTTTAT-CTTCATCC-TTAGTTTCGGT 57 Query 58 TTCGTCTCTGCCCAAAAATGCGGGGAGTCTGTGTTTTTCAGACCTAACGGTAAC-TATGA 116 || |||||||| |||||||| || ||||| ||||||||||||| || ||| || ||||| Sbjct 58 TTTGTCTCTGCACAAAAATGTGGAGAGTCAATGTTTTTCAGACCAAATGGT-ACTTATGA 116 Query 117 CACTAACCGTCGTCTCGTTCTATCAACGT-TAGCTTCCAACGTCAGTTCTCAAAACAACC 175 ||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||| Sbjct 117 CACTAACCGTCGTCTCGTTCTCTCAAC-TCTAGCTTCCAACGTCAGTTCTCAAAACAACC 175 Query 176 GCTTCTACAACGTTTCGGTCGGTGAAGGAGC-TGGAAGAATCTATGCCTTAGGTCTCTGT 234 ||||||||||||| || |||||||||||||| ||| || |||||||| ||||| |||||| Sbjct 176 GCTTCTACAACGTCTCAGTCGGTGAAGGAGCTTGG-AGGATCTATGCTTTAGGCCTCTGT 234 Query 235 ATCCCAGGGTCTGATCCAAGGGTGTGTTCCGATTGTATCCAACTCGCGTCTCAAGGTTTA 294 ||||||||| ||||||||| ||| ||| |||| |||||||||||||| || |||||||| Sbjct 235 ATCCCAGGGACTGATCCAAAGGTCTGTGCCGACTGTATCCAACTCGCATCAGAAGGTTTA 294 Query 295 TTACAAACCTGTCCGAACCAGACCGACTCATTCTACTGGACAGGCGACAACGCCGACAAG 354 ||||||| ||||||||||||||||||||||||| |||||| | | | | | ||||| Sbjct 295 TTACAAAACTGTCCGAACCAGACCGACTCATTCGACTGGAGA-G-G-C-A-----ACAAG 345 Query 355 ACGCTCTGTTTCGTTCGTTACTCTAACAACTCGTTTTTCAACAAGATGGCTCTAGAGCC- 413 ||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| Sbjct 346 ACGCTCTGTTTCGTTCGTTACTCCAACAGCTCGTTTTTCAACAAGATGGATCTAGAGCCG 405 Query 414 A-ACTCACGCAGTTTACAATACTATGAGGTTCCAAGGGAACCTCACAGCTTAT-ACAAGA 471 | | | | |||||| || ||||| | ||| ||||| ||| | | | ||||| || ||| Sbjct 406 ACAGT-A-ACAGTTTTCAGTACTAAAAAGTTTCAAGGTAACTTTAAAACTTATAAC-AGA 462 Query 472 ACATGGGACGCGTTCATGAACTTTATGTTCACCCGAGTCGGTCAAACTCGATACCTGGCT 531 |||||||||||| |||||||||||||| ||||||||||||||||| ||| |||||| || Sbjct 463 ACATGGGACGCGCTCATGAACTTTATGATCACCCGAGTCGGTCAATCTCAATACCTTGCC 522 Query 532 GATATATCCCCTCGGATAAATCAGGAACCTTTGTCTCCTGATCTTATATACGCGCTGATG 591 || |||||||||| | ||| ||| | | | ||||| ||||||| | |||||| Sbjct 523 GAAATATCCCCTC-G---AAT-AGG------T-T-T--TGATCGTATATACACTCTGATG 567 Query 592 CAGTGTATTCCGGGGATATCTTCTGAA-GACTGTGAAACCTGTCTTGGA-AAATGTGT-C 648 ||||||||||||||| |||| ||| || ||||||||||||||| || | || |||| | Sbjct 568 CAGTGTATTCCGGGGCTATCCTCT-AACGACTGTGAAACCTGTATTACAGTAA-GTGTCC 625 Query 649 GATGACTACCAGAGTTGCTGCAATGGGTTCATAGGTGGAGTCGTTAACAAGCCGGTCTGC 708 | | | |||||||| ||||||||||| ||| |||||||||||||| |||||| |||||| Sbjct 626 G-TAATTACCAGAGATGCTGCAATGGCTTCGTAGGTGGAGTCGTTCGCAAGCCTGTCTGC 684 Query 709 TATTTCCGGTGGGATGGTTATAAATAT-TATGGTGCCTTCGGTGATGA-AGCGCCATC-T 765 | ||||||||||||||||||| ||||| | ||||||||| ||| | | | ||| ||| | Sbjct 685 TTTTTCCGGTGGGATGGTTATGAATATCT-TGGTGCCTTTGGT-A--ACA-CGCAATCAT 739 Query 766 CAACC-CCCCACGCCGCTtcctcttcctcctcctcctcctcGTGATCCAGATGG-AAAAA 823 ||| || || | | || | || || | |||||||| || |||||| ||||| Sbjct 740 -TACCTCCTCAAGAATC-TCAACCCCCGCCGCTTCCTCCTCCTG---GAGATGGCAAAAA 794 Query 824 AGATCTCTACAGGAGTTATTGTGGCTATTGTTGTTTCCGCAGTTATCTTCGTGGTGCTAG 883 | || ||||||||||||||||||||||| ||||||||||| |||||||||| |||||| | Sbjct 795 AAAT-TCTACAGGAGTTATTGTGGCTATCGTTGTTTCCGCTGTTATCTTCGCGGTGCT-G 852 Query 884 -TCGCTTTAGGATTAGTTATTTGGAAGCGAAGACAATCATACAAAACACTGAAATATCAT 942 |||||||||||||||||||||||||| ||||| |||||||| ||||||||||| ||| Sbjct 853 CTCGCTTTAGGATTAGTTATTTGGAAGAGAAGAAAATCATACCAAACACTGAAACCTCAA 912 Query 943 ACTGATGATGATATGACAAGTCCACAGTCTCTGCAATTTGATTTTACAACAATTGAAGTG 1002 ||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||| | Sbjct 913 ACTGATGATGACATGATAAGTCCACAGTCTCTGCAATTTGATTTTGCAACAATTGAAGCG 972 Query 1003 GCAACAGATAATTTTTCGAGGAACAACAAGCTAGGTCAAGGCGGATTCGGTGAAGTTTAC 1062 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 973 GCAACAGATAAGTTTTCGAGGAACAACAAGCTAGGACAAGGCGGATTCGGTGAAGTTTAC 1032 Query 1063 AAGGGAATGTTACCTAATGAAACAGAAATTGCGGTAAAGCGTCTATCGAGTAATTCAGGA 1122 |||||||||||||| |||||||||||||||||||||||||| ||||| || ||||||||| Sbjct 1033 AAGGGAATGTTACCAAATGAAACAGAAATTGCGGTAAAGCGGCTATCAAGAAATTCAGGA 1092 Query 1123 CAAGGCACACAAGAGTTCAAGAACGAGGTTGTGATTGTGGCCAAACTTCAACACAAGAAT 1182 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1093 CAAGGCACACAAGAGTTCAAGAACGAGGTTGTGATTGTGGCTAAACTTCAACACAAGAAT 1152 Query 1183 CTTGTTAGGCTTCTTGGGTTTTGCATAGAAAGAGATGAACAGATACTTGTCTACGAGTTT 1242 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1153 CTTGTTAGGCTTCTTGGGTTTTGCTTAGAAAGAGATGAACAGATACTTGTCTACGAGTTT 1212 Query 1243 GTTTCCAACAAGAGCCTTGATTATTTCCTCTTTGATCCAA-AAATGAAAAGTCAACTAGA 1301 ||| |||||||||||||||||||||||||||||||||||| ||| ||| | ||| ||||| Sbjct 1213 GTTCCCAACAAGAGCCTTGATTATTTCCTCTTTGATCCAACAAA-GAAGACTCAGCTAGA 1271 Query 1302 TTGGAAAAGACGGTACAACATCATAGGAGGGGTTACGCGAGGACTTCTCTATCTTCATCA 1361 ||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||| Sbjct 1272 TTGGAAAAGACGGTACAACATCATAGGAGGGATTACGCGAGGGCTTCTATATCTTCATCA 1331 Query 1362 AGACTCAAGGCTAACAATCATACACCGTGACATCAAAGCAAGTAACATACTTTTAGATGC 1421 ||||||||| || || |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1332 AGACTCAAGACTCACCATCATACACCGTGACATCAAAGCAAGTAACATTCTTTTAGATGC 1391 Query 1422 TGATATGAACCCTAAAATAGCTGATTTTGGAATGGCAAGGAATTTTAGAGTGGACCAAAC 1481 |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||| Sbjct 1392 CGATATGAACCCTAAAATAGCAGATTTCGGAATGGCAAGGAATTTCAGAGTGGACCAAAC 1451 Query 1482 TGAAGACCAGACAGGAAGAGTTGTTGGAACCTTCGGTTACATGCCTCCAGAGTATGTGAC 1541 |||||| | ||||| |||||||||||||| |||||||||||||||||||| |||||||| Sbjct 1452 TGAAGAAAATACAGGCAGAGTTGTTGGAACATTCGGTTACATGCCTCCAGAATATGTGAC 1511 Query 1542 ACATGGCCAATTCTCTACCAAATCTGATGTATATAGCTTTGGTGTATTGA-TCTTGGAGA 1600 ||||||||||||||||||||||| ||||| |||||||| || ||||||| || |||||| Sbjct 1512 GCATGGCCAATTCTCTACCAAATCCGATGTCTATAGCTTCGGAGTATTGATTC-TGGAGA 1570 Query 1601 TTGTTTGTGGCAAGAAGAACAGCAGCTTCTTTCAGATGGATGATTCTGGGGGAAATTTAG 1660 || |||||||||||||||| |||||||||| ||||||||||||||||||||||||||| | Sbjct 1571 TTATTTGTGGCAAGAAGAATAGCAGCTTCTATCAGATGGATGATTCTGGGGGAAATTTGG 1630 Query 1661 TGACACATGTTTGGAGGCTTTGGAACAATGATTCACCCTTAGATCTCATCGACCCTGCGA 1720 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1631 TGACACATGTTTGGAGGCTTTGGAACAATGATTCACCTTTAGATCTCATCGACCCTGCGA 1690 Query 1721 TTAAGGAAAGCTACGATAATGATGAAGTCATTAGATGTATCCATATCGGAATTTTATGTG 1780 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1691 TTAGGGAAAGCTACGATAATGATGAAGTCATTAGATGTATCCATATCGGAATTTTATGTG 1750 Query 1781 TTCAAGAAACTCCGGCAGATCGTCCAGAGATGTCTACAATCTTTCAAATGCTTACCAATA 1840 ||||||||||||| || |||||||| ||||||||||||| ||||||||||||||| |||| Sbjct 1751 TTCAAGAAACTCCCGCTGATCGTCCGGAGATGTCTACAACCTTTCAAATGCTTACGAATA 1810 Query 1841 GCTCCATTACTCTGCCTGTGCCTCGACCACCTGGATTTTTCTTCAGGAACAGACCCAATT 1900 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 1811 GCTCCATTACTCTGCCTGTGCCTCGCCCACCTGGATTTTTCTTCAGGAACAGGCCCAATT 1870 Query 1901 TAGACCCCTTAACCTATGGATCCGAGC-AGGGGCAATCCAGCAGCATGTCTGTTCCTTTT 1959 ||||||| ||||| ||||||||||||| |||| |||||||||| |||||||||||||| | Sbjct 1871 TAGACCCTTTAACTTATGGATCCGAGCCAGGG-CAATCCAGCAACATGTCTGTTCCTTAT 1929 Query 1960 TCTATAGATAGTGCGTCAATCACTAGAGCCACTCCTCGGTGA 2001 |||||||||||||||||||||||||||| ||||||||||||| Sbjct 1930 TCTATAGATAGTGCGTCAATCACTAGAGTCACTCCTCGGTGA 1971 > Ahg489975 jgi|Araly1|489975|fgenesh2_kg.6__3109__AT4G11480.1 Length=1881 Score = 1336 bits (723), Expect = 0.0 Identities = 948/1057 (90%), Gaps = 13/1057 (1%) Strand=Plus/Plus Query 810 TCCAGAT-GGAAAAAAGATCTCTACAGGAGTTATTG-T--GGCTATTGTTGTTTCCGCAG 865 ||||||| |||||| | || ||||| |||| ||||| | || | ||||||||||||| | Sbjct 756 TCCAGATGGGAAAACA-ATATCTACGGGAGCTATTGTTGCGGTTGTTGTTGTTTCCGCGG 814 Query 866 TTATCTTCGTGGTGCTAG-TCGCTTTAGGATTAGTTATTTGGAAGCGAAGACAATCATAC 924 |||| || || | ||| | ||||||||| ||| |||||| ||||| |||||||||||||| Sbjct 815 TTATATTTGTCGCGCT-GCTCGCTTTAGTATTGGTTATTCGGAAGAGAAGACAATCATAC 873 Query 925 AAAACACTGAAATATCATACTGATGATGATATGACAAGTCCACAGTCTCTGCAATTTGAT 984 |||||||| ||| ||| |||||| |||| |||||||||||||||||||||||||||||| Sbjct 874 AAAACACTAAAACCTCAAACTGATAATGACATGACAAGTCCACAGTCTCTGCAATTTGAT 933 Query 985 TTTACAACAATTGAAGTGGCAACAGATAATTTTTCGAGGAACAACAAGCTAGGTCAAGGC 1044 |||| || | |||| |||||| ||||| |||||| |||| ||||||||||||||||| Sbjct 934 TTTATGACCCTCGAAGCGGCAACTGATAAATTTTCGGGGAATAACAAGCTAGGTCAAGGT 993 Query 1045 GGATTCGGTGAAGTTTACAAGGGAATGTTACCTAATGAAACAGAAATTGCGGTAAAGCGT 1104 |||||||| ||| ||| |||||||| ||||| ||| |||||||| ||||||| ||||| Sbjct 994 GGATTCGGCGAAATTTTTAAGGGAATATTACCAAATCAAACAGAAGTTGCGGTGAAGCGG 1053 Query 1105 CTATCGAGT-AATTCAGGACAAGGCACACAAGAGTTCAAGAACGAGGTTGTGATTGTGGC 1163 ||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1054 CTATCGA-TAAATTCAGGACAAGGCACACAAGAGTTCAAGAACGAGGTTGTAATTGTGGC 1112 Query 1164 CAAACTTCAACACAAGAATCTTGTTAGGCTTCTTGGGTTTTGCATAGAAAGAGATGAACA 1223 || |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 1113 TAAGCTTCAACACAGGAATCTTGTTAGGCTTCTTGGGTTTTGCTTAGAAAGATATGAACA 1172 Query 1224 GATACTTGTCTACGAGTTTGTTTCCAACAAGAGCCTTGATTATTTCCTCTTTGATCCAA- 1282 ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 1173 GATACTTGTCTACGAGTTTGTTTCCAACAAGAGCCTTAACTATTTCCTCTTTGATCCAAC 1232 Query 1283 AAATGAAAAGTCAACTAGATTGGAAAAGACGGTACAACATCATAGGAGGGGTTACGCGAG 1342 ||| ||| ||||| ||||||||||||| ||| |||| |||||| |||||| ||||||||| Sbjct 1233 AAA-GAAGAGTCAGCTAGATTGGAAAATACGATACAGCATCATTGGAGGGATTACGCGAG 1291 Query 1343 GACTTCTCTATCTTCATCAAGACTCAAGGCTAACAATCATACACCGTGACATCAAAGCAA 1402 | ||||||||||||||||||||||| |||| || || |||||||||||||||||||||| Sbjct 1292 GGCTTCTCTATCTTCATCAAGACTCGCGGCTCACCATTATACACCGTGACATCAAAGCAA 1351 Query 1403 GTAACATACTTTTAGATGCTGATATGAACCCTAAAATAGCTGATTTTGGAATGGCAAGGA 1462 ||||||| ||||||||||| |||||||||||||||||||| ||||| ||||| ||||| | Sbjct 1352 GTAACATTCTTTTAGATGCCGATATGAACCCTAAAATAGCGGATTTCGGAATCGCAAGAA 1411 Query 1463 ATTTTAGAGTGGACCAAACTGAAGACCAGACAGGAAGAGTTGTTGGAACCTTCGGTTACA 1522 ||||||| |||||||||||||||||| | |||||||||||||||||||| |||||||||| Sbjct 1412 ATTTTAGCGTGGACCAAACTGAAGACAATACAGGAAGAGTTGTTGGAACATTCGGTTACA 1471 Query 1523 TGCCTCCAGAGTATGTGACACATGGCCAATTCTCTACCAAATCTGATGTATATAGCTTTG 1582 ||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||| Sbjct 1472 TGCCTCCAGAGTATGTGACGCACGGCCAATTCTCTACCAAATCTGATGTTTATAGCTTTG 1531 Query 1583 GTGTATTGAT-CTTGGAGATTGTTTGTGGCAAGAAGAACAGCAGCTTCTTTCAGATGGAT 1641 | |||||||| || ||||||| |||||||||||||||| |||||||||| ||||||| | Sbjct 1532 GAGTATTGATTCT-GGAGATTATTTGTGGCAAGAAGAATAGCAGCTTCTACCAGATGGCT 1590 Query 1642 GATTCTGGGGGAAATTTAGTGACACATGTTTGGAGGCTTTGGAACAATGATTCACCCTTA 1701 |||||||| || ||||| ||||||||||||||||||||||||||||| | |||||||||| Sbjct 1591 GATTCTGGTGGCAATTTGGTGACACATGTTTGGAGGCTTTGGAACAACGCTTCACCCTTA 1650 Query 1702 GATCTCATCGACCCTGCGATTAAGGAAAGCTACGATAATGATGAAGTCATTAGATGTATC 1761 |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1651 GATCTCATAGACCCCGCGATTAAGGAAAGCTACGATAATGATGTAGTCATTAGATGTATA 1710 Query 1762 CATATCGGAATTTTATGTGTTCAAGAAACTCCGGCAGATCGTCCAGAGATGTCTACAATC 1821 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 1711 CATATCGGAATTTTATGTGTTCAAGAAACTCCGGCAGATCGTCCGGAGATGTCTACGATC 1770 Query 1822 TTTCAAATGCTTACCAATAGCTCCATTACTCTGCCTG 1858 |||||||||||||| ||||||| ||||||||| |||| Sbjct 1771 TTTCAAATGCTTACAAATAGCTTCATTACTCTACCTG 1807 Score = 527 bits (285), Expect = 1e-148 Identities = 619/771 (80%), Gaps = 59/771 (8%) Strand=Plus/Plus Query 1 ATGTGTTTGAACACTCTC-TGTGCAATCCTCTGTTTTGTCCTTACCGTTAGTTTCGGCTT 59 |||| | || ||| |||| ||| ||||||||||||||||||| || |||| ||||||| Sbjct 1 ATGTCTCTGCACAATCTCTTGT-CAATCCTCTGTTTTGTCCTCGCCATTAGCTTCGGCTA 59 Query 60 CGTCTCTGCCCAAAAATGCGGGGAGTCTGTGTTTTTCAGACCTAACGGTAAC-TATGACA 118 ||| ||||| |||||||| | ||| || ||||||||||||| |||||| || ||||||| Sbjct 60 CGTGTCTGCACAAAAATGTGTGGACTCAATGTTTTTCAGACCCAACGGT-ACTTATGACA 118 Query 119 CTAACCGTCGTCTCGTTCTATCAACGT-TAGCTTCCAACGTCAGTTCTCAAAACAACCGC 177 | |||||||||||| |||| ||||| | | ||||||||||| || | || | | || Sbjct 119 CAAACCGTCGTCTCATTCTCTCAAC-TCTTGCTTCCAACGTGAG-T-ACACGA-GATGGC 174 Query 178 TTCTACAACGTTTCGGTCGGTGAAGGAGCTGGAAGAATCTATGCCTTAGGTCTCTGTATC 237 | |||||||| ||||||||||||||| ||| || ||||||||||||||||||||||||| Sbjct 175 TACTACAACGGTTCGGTCGGTGAAGGCCCTGAAAAAATCTATGCCTTAGGTCTCTGTATC 234 Query 238 CCAGGGTCTGATCCAAGGGTGTGTTCCGATTGTATCCAACTCGCGTCTCAAGG-TTTATT 296 ||| || ||||||||| ||| ||||| |||||||||||| |||| ||| | || |||||| Sbjct 235 CCAAGGACTGATCCAAAGGTCTGTTCTGATTGTATCCAAATCGCATCT-ACGGGTTTATT 293 Query 297 ACAAACCTGTCCGAACCAGACCGACTCATTCTACTGGACAGGCGACAACGCC-GACAAGA 355 ||||| ||| ||||||||||||||||| || || | || || || | || || || | Sbjct 294 ACAAAACTGCCCGAACCAGACCGACTC-TT--AC-G-ACTGGAGAT--C-CCAGA-AA-A 343 Query 356 CGCTCTGTTTCGTTCGTTACTCTAACAACTCGTTTTTCAACAAGATGGCTCTAGAGCCAA 415 | |||||||||||||||||||| |||| |||||||| |||||| |||| ||||||||| | Sbjct 344 CACTCTGTTTCGTTCGTTACTCCAACAGCTCGTTTTCCAACAAAATGGATCTAGAGCCGA 403 Query 416 C--TCAC----GCAGTT-TACAATACTATGAGG-TTCCAAGGGAACCTCACAGCTTATAC 467 | | | | || | || |||| | || |||||||||||||| ||||||||| | Sbjct 404 CAATGATAATAGGAGATCTA-AATAGTG-GACTATTCCAAGGGAACCTAACAGCTTATTC 461 Query 468 AAGAACATGGGACGCGTTCATGAACTTTATGTTCACCCGAGTCGGTCAAACTCGATACCT 527 |||||||||||| | ||||||||| | |||| ||||||||||||||| |||||| ||||| Sbjct 462 AAGAACATGGGAGGTGTTCATGAAATCTATGATCACCCGAGTCGGTCGAACTCGTTACCT 521 Query 528 GGCTGATATATCCCCTCGGATAAATCAGGAACCTTTGTCTCCTGATCTTATATACGCGCT 587 ||| ||||| |||||||||||| || | | || ||| | | ||||||||||| Sbjct 522 GGCCGATATTTCCCCTCGGATA-----GG--C-TCTG-CTC--G-T---ATATACGCGCT 566 Query 588 GATGCAGTGTATTCCGGGGATATCTTCTGAAGACTGTG-AAACCTGTCTT-GG-AAAATG 644 |||||| ||||||||||||||||| ||| || |||| ||| ||| || || |||||| Sbjct 567 GATGCAATGTATTCCGGGGATATCCTCTTTGGAATGTGGAAAT-TGTATTCGGGAAAATG 625 Query 645 TGTCG-ATGACTACCAGAGTTGCTGCAATGGGTTCATAGGTGGAG-TCGTTAACAAGCCG 702 || || ||| ||||||| ||||||||||||||||||||| ||| | || ||||||| Sbjct 626 TG-CGGATG--TACCAGAATTGCTGCAATGGGTTCATAGGAGGAACTA-TTCGCAAGCCG 681 Query 703 GTCTGCTATTTCCGGTGGGATGGTTATAAATAT-TATGGTGCCTTCGGTGA 752 ||||||| ||| ||||||||||||| | ||||| | ||||||||| ||||| Sbjct 682 GTCTGCTTTTTACGGTGGGATGGTTCTGAATATCT-TGGTGCCTTTGGTGA 731 > Ahg895324 jgi|Araly1|895324|Al_scaffold_0006_3320 Length=2007 Score = 756 bits (409), Expect = 0.0 Identities = 883/1105 (80%), Gaps = 60/1105 (5%) Strand=Plus/Plus Query 810 TCCAGATGGAAAAAAGATCTCTACAGGAGTTATTGTGGCTATTGTTGTT-TCCGCAGTTA 868 ||||||||| |||| ||| ||||||||| |||| ||| |||||| | || |||| || | Sbjct 825 TCCAGATGGCAAAACGATTTCTACAGGAATTATAGTGTCTATTG-TCTTCTCCGTGGTCA 883 Query 869 TCTTCGTGGTGCTAG-TCGCTTTAGGATTAG-TTATTTGGAAGCGAAGACAATCATACAA 926 | ||||||| ||| | | ||| |||| || | || ||| |||| |||||||| ||||||| Sbjct 884 TATTCGTGGCGCT-GTTTGCTCTAGGGTT-GATTTTTTTGAAGAGAAGACAAACATACAA 941 Query 927 AACACTGAAA--TATCATACTGATGATGATATGACAAGTCCACAGTCTCTGCAATTTGAT 984 | || | ||| | | | ||| |||||||||| ||||||||||||||||||||||||||| Sbjct 942 AGCA-TTAAAGCT-TGAAACTAATGATGATATTACAAGTCCACAGTCTCTGCAATTTGAT 999 Query 985 TTTACA-ACAATTGAAGTGGCAACAGATAATTTTTCGAGGAACAACAA-GCTAGGTCAAG 1042 || | | |||||||||| |||||| ||||| |||||| |||||||||| | | ||||||| Sbjct 1000 TTCA-AGACAATTGAAGCGGCAACTGATAAATTTTCGGGGAACAACAAAG-TCGGTCAAG 1057 Query 1043 GCGGATTCGGTGAAGTTTACAAGGGAATG-TTACCTA-ATGAAACAGAAATTGCGGTAAA 1100 | ||||| ||||||||||||||||||| | ||| | | ||| ||| ||| |||| || || Sbjct 1058 GTGGATTTGGTGAAGTTTACAAGGGAA-GATTATC-AGATGGAACTGAAGTTGCCGTGAA 1115 Query 1101 GCGTCTATCGAGTAATTCAGGACAAGGCACACAAGAGTTCAAGAACGAGGTTGTGATTGT 1160 ||| ||||| | ||||||||||||||| |||||||||| ||||| |||||||| |||| Sbjct 1116 GCGACTATCAAAAAATTCAGGACAAGGCTCACAAGAGTTTAAGAATGAGGTTGTTCTTGT 1175 Query 1161 GGCCAAACTTCAACACAAGAA-TCTTGTTAGGCTTCTTGGGTTTTGCATAGAAAGAGATG 1219 ||| || |||||||| | ||| ||||||||||||||||||||||||| | ||| |||| | Sbjct 1176 GGCGAAGCTTCAACATA-GAAATCTTGTTAGGCTTCTTGGGTTTTGCTTGGAAGGAGAAG 1234 Query 1220 AACAGATACTTGTCTACGAGTTTGTTTCCAACAAGAGCCTTGATTATTTCCTCTTTGATC 1279 |||||||||||||||| ||||||||| |||||||||||||||||||||||||||| || | Sbjct 1235 AACAGATACTTGTCTATGAGTTTGTTCCCAACAAGAGCCTTGATTATTTCCTCTTCGACC 1294 Query 1280 CAAAAATGAAAAGTC-A-A-CTAGATTGGAAAAGACGGTACAACATCATAGGAGGGGTTA 1336 ||| || || ||| | | ||||||||| |||||||||||| ||||| |||||| || Sbjct 1295 CAACAA--AAC-GTCGACAACTAGATTGGGGAAGACGGTACAATATCATTGGAGGGATTG 1351 Query 1337 CGCGAGG-ACTTCTCTATCTTCATCAAGACTCAAGGCTAACAATCATACACCGTGA-CAT 1394 | ||||| | ||||||||||||||||||| ||| |||| ||||||||||||||||| | | Sbjct 1352 CTCGAGGGA-TTCTCTATCTTCATCAAGATTCACGGCTCACAATCATACACCGTGATC-T 1409 Query 1395 CAAAGCAAGTAACATACTTTTAGATGCTGATATGAACCCTAAAATAGCTGATTTTGGAAT 1454 |||||| || ||||| ||| |||||| |||||||||||| |||||||| |||||||| || Sbjct 1410 CAAAGCGAGCAACATTCTTCTAGATGATGATATGAACCCGAAAATAGCGGATTTTGGCAT 1469 Query 1455 GGCAAGGAATTTTAG-AGTGGACCAAACT-GAAGACCAG-AC-AGGAAGAGTTGTTGGAA 1510 |||||||||||| | | |||| |||||| || | ||| || || || | | | ||||| Sbjct 1470 GGCAAGGAATTTCGGGA-TGGAGCAAACTCGA-G-CCAATACTAGCAAAA-TAGCTGGAA 1525 Query 1511 CCTTCGGTTACATGCCTCCAGAGTATGTGACACATGGCCAATTCTCTACCAAATCTGATG 1570 |||||||||||||| |||| |||||||||| || || ||||| || | ||||||||| Sbjct 1526 CCTTCGGTTACATGGCTCCCGAGTATGTGATGCACGGTCAATTTTCCATGAAATCTGATA 1585 Query 1571 TATATAGCTTTGGTGTATTGAT-CTTGGAGATTGTTTGTGGCAAGAAGAACAGCAGCTTC 1629 | |||||||| || || ||| | |||| ||||| | |||| |||| ||| || |||||| Sbjct 1586 TCTATAGCTTCGGAGTGTTGGTTCTTG-AGATTATAAGTGGTAAGATGAATAGTAGCTTC 1644 Query 1630 TTTCAGATG-GATG-ATTCTGGGGGAAATTTAGTGACACATGTTTGGAGGCTTTGGA-AC 1686 | ||| || |||| || ||| || |||||||| ||||||| |||||| || |||| | Sbjct 1645 TATCA-ATCAGATGGAT-CTGCTGGCAATTTAGTAACACATGCTTGGAGACTATGGAGAA 1702 Query 1687 AATGATTCACCCTTAGATCTCATCGACCCTG-CGATT-AAGGAAAGCTA-CGATAATGAT 1743 || | ||| || ||||| ||| | ||| | | | ||| |||| || || | | | ||| Sbjct 1703 AAGG-TTCGCCTTTAGAACTCTTGGACTC-GACTATTGAAGGGAAT-TATC-AGAGCGAT 1758 Query 1744 GAAGTCATTAGATGTATCCATATCG-GAATTTTATGTGTTCAAGAA-ACTCCGGCAGATC 1801 ||||| | ||||| || ||||||| | |||||||||| ||||| | ||| | | ||| Sbjct 1759 GAAGTTACAAGATGCATTCATATCGCGC-TTTTATGTGTGCAAGAGGA-TCCTGAAAATC 1816 Query 1802 GTCCAGA-GATGTCTACAATC-TTTCAAATGCTTACCAATAGCTCCATTACTCTGCCTGT 1859 ||||| | |||||||||||| ||| | |||| || | || | | || ||| | | || Sbjct 1817 GTCCA-ATGATGTCTACAATTATTTTGA-TGCTCACTAGTAACACAATCACTTTACAAGT 1874 Query 1860 GCCTCGACCACCTGGATTTTTCTTC 1884 |||||| |||||| ||||||||| Sbjct 1875 GCCTCGTGCACCTGCTTTTTTCTTC 1899 > Ahg489974 jgi|Araly1|489974|fgenesh2_kg.6__3108__AT4G11460.1 Length=2016 Score = 736 bits (398), Expect = 0.0 Identities = 773/949 (81%), Gaps = 45/949 (5%) Strand=Plus/Plus Query 1078 AATGAAACAGAAATTGCGGTAAAGCGTCTATCGAGTAA-TTCAGGA-CAAGG-CACACAA 1134 |||| ||| ||| |||| || ||| | || || || || |||| || ||||| | || Sbjct 1084 AATGGAACTGAAGTTGCAGTTAAGAGGCTGTCAAG-AACTTCA-GATCAAGGTGA-ACTG 1140 Query 1135 GAGTTCAAGAACGAGGTTG-TGATTGTGGCCAAA-CTTCAACACAAGAATCTTGTTAGGC 1192 |||||||||||||||| || | | || | |||| ||||| | | |||||| ||||||| Sbjct 1141 GAGTTCAAGAACGAGG-TGCTTCTGGTAG-CAAAGCTTCAGCCCCGGAATCTCGTTAGGC 1198 Query 1193 TTCTTGGGTTTTGCAT-AG-AAAGAGATGAACAGATACTTGTCTACGAGTTTGTTTCCAA 1250 ||| | |||||||| | | || |||| ||| ||||||| |||| ||||||||| |||| Sbjct 1199 TTC-TCGGTTTTGC-TCTGCAAGGAGAAGAAAAGATACTCGTCTTTGAGTTTGTTCCCAA 1256 Query 1251 CAAGAGCCTTGATTATTTCCTCTT---T-G-A-T---CCAA-AAATGAAAAGTCAACTAG 1300 ||||||||| |||||||||||||| | | | | |||| ||| ||| |||| || | Sbjct 1257 CAAGAGCCTCGATTATTTCCTCTTCGGTAGTACTAACCCAACAAA-GAAGGGTCAGCTGG 1315 Query 1301 ATTGGAAAAGACGGTACAACATCATAGGAGGGGTTACGCGA-GGACTTCTCTATCTTCAT 1359 | |||| |||| ||||||||||||| |||||| |||| ||| ||| |||||||||||||| Sbjct 1316 ACTGGACAAGATGGTACAACATCATCGGAGGGATTACACGAGGGA-TTCTCTATCTTCAT 1374 Query 1360 CAAGACTCAAGGCTAACAATCATACACCGTGACATCAAAGCAAGTAACATACTTTTAGAT 1419 |||||||| ||||| || ||||||||||||||||||||||| |||||||| ||||||||| Sbjct 1375 CAAGACTCGAGGCTCACCATCATACACCGTGACATCAAAGCGAGTAACATTCTTTTAGAT 1434 Query 1420 GCTGATATGAACCCTAAAATAGCTGATTTTGGAATGGCAAGGAATTTTAGAG-TGGACCA 1478 || |||||||||| |||||||| ||||| | |||||| |||||||| |||| | | || Sbjct 1435 GCCAATATGAACCCGAAAATAGCGGATTTCGAAATGGCTAGGAATTTCAGAGAT-CATCA 1493 Query 1479 AACTGAAGACCAG-ACAGGAAGAGTTGTTGGAACCTTCGGTTACATGCCTCCAGAGTATG 1537 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1494 AACTGAAGA-CAGTACAGGAAGAGTTGTTGGAACCTTCGGTTACATGCCTCCAGAATATG 1552 Query 1538 TGACACATGGCCAATTCTCTACCAAATCTGATGTATATAGCTTTGGTGTATTGAT-CTTG 1596 |||| ||||||||||||||||||||||| ||||| |||||||| || |||||||| || | Sbjct 1553 TGACGCATGGCCAATTCTCTACCAAATCCGATGTCTATAGCTTCGGAGTATTGATTCT-G 1611 Query 1597 GAGATTGTTTGTGGCAAGAAGAACAGCAGCTTCTTTCAGATGGATGATTCTGGGGGAAAT 1656 ||||||||| |||||| |||||| |||||||||| ||||||||||| ||||| | || Sbjct 1612 GAGATTGTTAGTGGCAGGAAGAATAGCAGCTTCTATCAGATGGATGGTTCTGTTTGCAAC 1671 Query 1657 TTAGTGACACATGTTTGGAGGCTTTGGAACAATGATTCACCCTTAGATCTCATCGACCCT 1716 || || ||| |||||||||| |||||||||| |||| || |||| || ||||| || || Sbjct 1672 TTGGTCACATATGTTTGGAGACTTTGGAACACTGATACATCCTTGGAGCTCATAGATCCG 1731 Query 1717 GCGATTAAGGAAAGCTACGATAATGATGAAGTCATTAGATGTATCCATATCGGAATTTTA 1776 ||||||| |||||| || || || |||||||||| |||||| |||||||||||| ||||| Sbjct 1732 GCGATTAGGGAAAGTTATGAGAAAGATGAAGTCACTAGATGCATCCATATCGGACTTTTA 1791 Query 1777 TGTGTTCAAGAAACTCCGGCAGATCGTCCAGAGATGTCTACAATCTTTCAAATGCTTACC 1836 || |||||||||| ||| ||| |||| |||| ||||||||| | || || ||||| ||| Sbjct 1792 TGCGTTCAAGAAAATCCTGCAAATCGCCCAGCTATGTCTACAGTATTCCAGATGCTCACC 1851 Query 1837 AATAGCTCCATTACTCTGCCTGTGCCTCGACCACCTGGATTTTTCTTCAGGAACAGACCC 1896 ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||| Sbjct 1852 AATAGCTCCATTACTCTAAATGTCCCTCAACCACCTGGATTTTTCTTCAGGAACAGACCC 1911 Query 1897 -AATTTAGACCCCTTAA-CCT-ATG-GATCCGAGCAGGGGCAATCCAGCAGCATGTCTGT 1952 ||| ||| | |||| || | | | | ||||||| |||| | || || ||||| Sbjct 1912 GAATCG-GACACATTAAGCCGCA-GAG-TG-GAGCAGGACCAATATAACACCAAATCTGT 1967 Query 1953 TCCTTTTTCTATAGAT-AGTGCGTCAATCACTAGAGC-CACTCCTCGGT 1999 | ||| |||||| || | ||| | ||||||| | | ||||||||||| Sbjct 1968 TACTTGTTCTATCGACGA-TGCAACGATCACTACA-CTCACTCCTCGGT 2014 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 75228233875 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5