BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G11770.1 Length=1191 Score E Sequences producing significant alignments: (Bits) Value Ahg327310 jgi|Araly1|327310|fgenesh1_pm.C_scaffold_6002530 765 0.0 Ahg943042 jgi|Araly1|943042|scaffold_603586.1 632 2e-180 Ahg943045 jgi|Araly1|943045|scaffold_603589.1 248 7e-65 Ahg354756 jgi|Araly1|354756|fgenesh1_pg.C_scaffold_7001929 215 7e-55 Ahg333104 jgi|Araly1|333104|fgenesh1_pm.C_scaffold_34000003 93.5 3e-18 Ahg931187 jgi|Araly1|931187|scaffold_303644.1 91.6 1e-17 > Ahg327310 jgi|Araly1|327310|fgenesh1_pm.C_scaffold_6002530 Length=1545 Score = 765 bits (414), Expect = 0.0 Identities = 929/1166 (80%), Gaps = 82/1166 (7%) Strand=Plus/Plus Query 30 TAATATGCCTTACCTTCCTGATGATTTACTATTAAACAT-CTTAGGCCGTGTCTCGAGAT 88 |||||| || ||| |||| ||||||||||| || ||| | ||||| ||| || ||||||| Sbjct 21 TAATATACCATACATTCCCGATGATTTACTTTTGAAC-TGCTTAGCCCGCGTATCGAGAT 79 Query 89 TGTACTACCCGATTCTCTCCTTAGTTTCCAAGAGATTCCGCTCTCTCGT-TGGATCACTT 147 ||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||| Sbjct 80 TGTACTACCCGATTCTCTCCTTAGTTTCCAAGAGATTCCGCTCTCTCGTGTC-ATCTCTT 138 Query 148 GAGCTTTACAAGATCCGAACGCTCCTAGGACGACGCACTGAGAATTGTCTTTATCTGAGC 207 |||||||| ||||||||| |||| |||||| || | | ||||||||||||||||||||| Sbjct 139 GAGCTTTATGAGATCCGAATGCTCTTAGGAC-ACAC-C-GAGAATTGTCTTTATCTGAGC 195 Query 208 TTACGTTTCAGTTATGGATCTAACCCACGTTGGTTCACTCTATGCCGAAGACCAACTCGA 267 |||||||| ||||||| |||| | |||||||| |||||||||||||||| ||||||||| Sbjct 196 TTACGTTTAAGTTATGAATCTGATACACGTTGGCTCACTCTATGCCGAAGGCCAACTCGA 255 Query 268 ACCCCTAGCCCTGAACC-TAACC-T---T--AAGTCACGATGGTTCACATCCTGCTTTAG 320 | ||||| |||| |||| ||||| | | || |||||||||||| | || |||||||| Sbjct 256 ATCCCTAACCCT-AACCCTAACCCTAACTTTAACTCACGATGGTTCTCTTCTTGCTTTAG 314 Query 321 ACCA-AT-----CCTAACA-AATCTCACTAGGGCCACTAGCAAGGAAGAAAAGAAGTTAA 373 |||| || ||||| | |||| | || | | | | ||| |||| ||||||| || Sbjct 315 ACCAGATAGAATCCTAA-AGAATC--A-TA---CTA-T-G-AAGAAAGAGAAGAAGTCAA 364 Query 374 GTGAAAATCTTATGGTCTCAATCCCGACTAGCAATG--A-TTGTCC-TCTGTCTG-GCTT 428 |||| ||||| ||||||||| ||| | | || | | || ||| || ||||| | || Sbjct 365 GTGACAATCTCATGGTCTCATTCCAAATTCCCAGTCTTAGTTCTCCATC-GTCTGAG-TT 422 Query 429 GACTTGTAACACAATTGGTTCTTATATCTACATGATTGGGGGATA--CATAAATGGTGTG 486 |||| ||| | ||||||||||| ||||||| ||||| | | ||| || || |||||| Sbjct 423 GACTGGTATCGCAATTGGTTCTAATATCTATATGAT-GAGC-ATATTCAGCAACGGTGTG 480 Query 487 CTCTCATCTAGGGTCTTCTTCTTGGATTGTCGGTCTCACACCTGGCATGAAGCTCCAAGC 546 ||||||||||| |||||||| |||| |||||||||||||| | |||||||||||||||| Sbjct 481 TTCTCATCTAGGTTCTTCTTCATGGACTGTCGGTCTCACACATTGCATGAAGCTCCAAGC 540 Query 547 ATGCAGGTAG--CCCGAAAGTCCCCACTC-GTGAATGTTCTTGATGGGAAAATATATGTA 603 ||||| ||| ||| |||| || ||| || ||||||||||||||||||||||||||| Sbjct 541 ATGCA--TAGGGCCCCAAAGAAACC-CTCCGTTAATGTTCTTGATGGGAAAATATATGTA 597 Query 604 GTGGAAGGCTGGAGAGGTTCCGATTACTCGAATCTCATCGAGAT-TTTCGATCCCAAAAC 662 | |||||||| | | | |||||||||||||| | |||||| | |||||||| ||||| Sbjct 598 ATCGAAGGCTGCAAAAATCCCGATTACTCGAATTTGATCGAG-TGTTTCGATCAAAAAAC 656 Query 663 CCAAAAATGGGAACATGTGCCAAGCCCTAGCGCGGAGATGCGTGGGAGGTATAT-ATCAA 721 | || |||||| |||||||||||||||||| ||| ||| ||||| |||||||| | || Sbjct 657 CTTAACATGGGAGCATGTGCCAAGCCCTAGCTCGGCGATACGTGGTAGGTATATTA-CAG 715 Query 722 -AAGGTTTAGTCTAT-GAAGAAAAACTTTACCTGTTTGGGGATAAAAA-TGTGGTTTACA 778 ||| |||||| | | || | ||| ||||||||||||||||||||||| | ||||||||| Sbjct 716 CAAG-TTTAGTTT-TCGACGGAAAGCTTTACCTGTTTGGGGATAAAAAAT-TGGTTTACA 772 Query 779 AGCCTAAGGAAAGTAGATGGGATGCGTTAGGGTTTGATATGAATTTGTGGTTGGT-TAGC 837 |||| || |||| || |||||||| | |||| || || ||| |||| | |||| | | Sbjct 773 AGCCCAACGAAAATAAATGGGATGTGGTAGGATTGGAGATGCCTTTGCG-TTGGACTCCC 831 Query 838 TATGGT-TCTTCTTGCGT-GATAGATAATGTA-TGT--TATAT-GGTATTTTATAAAA-G 890 | | | | | ||||||| | ||||||| ||| | | | | | || | | || | | Sbjct 832 TCTTATATAT-CTTGCGTAG-TAGATAACGTAATCTACTGTTTTGG-AGCATCTAGATTG 888 Query 891 ACTCATATGGTACGACTCCGAGGTAAGAT-ATTGGAGAGT-TTTGAAGGGTTTGGAAAAA 948 ||| | |||||| || | |||| |||| || ||||| | ||||||||||||| ||||| Sbjct 889 -CTCTTGTGGTACAACACAGAGGAAAGAACAT-GGAGA-TATTTGAAGGGTTTGAAAAAA 945 Query 949 -TTACCTAAATTACGACATCG-TCGTTCTTGTATTAGAATGGTGGATTATGGTGGAAAGA 1006 || |||||| ||| | | | | | || || ||||| ||||| ||||||||||||||| Sbjct 946 CTT-CCTAAACTACCAAAG-GATTATACTCGTGTTAGATTGGTGAATTATGGTGGAAAGA 1003 Query 1007 TTGC-GATTCTGTGGGAGAAGAAAGTGCGTGTTGTCGGCTCTGACAAGAAAATGATTTGG 1065 |||| | || |||||||| || | || ||||||| | | || | ||||| ||||||||| Sbjct 1004 TTGCAGTTT-TGTGGGAGGAGGATGTCCGTGTTGGAGACCCTCAGAAGAAGATGATTTGG 1062 Query 1066 TGTACTGAGATTGCGCTTGAAAGGCGCAGTGCACACAAGATTTATGGGAAGATTGAGTGG 1125 ||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1063 TGTGCTGAGATTACGCTTGAAAGGCGCAATGCACACAAGATTTATGGGAAGATTGAGTGG 1122 Query 1126 TGTGATGTTGTGCTTACAGTGCCCAA 1151 ||||| ||||||||||| || ||||| Sbjct 1123 TGTGACGTTGTGCTTACTGTCCCCAA 1148 Score = 250 bits (135), Expect = 2e-65 Identities = 221/261 (85%), Gaps = 12/261 (5%) Strand=Plus/Plus Query 930 TTTGAAGGGTTTGGAAAAATTACCTAAATTACGAC-ATCGTC-GTT-CTTGTATTAGAAT 986 |||||||||||||||| | ||||| |||||| | || ||| ||| ||||| ||| | | Sbjct 1272 TTTGAAGGGTTTGGAAGTACTACCTGAATTACCTCTATTGTCAGTTACTTGTGTTACATT 1331 Query 987 GGTGGATTATGGTGGAAAGATTGCGATTCTGTGGGAGAAGAAA--GTG-CGTGTTGTCGG 1043 ||||||| || ||||||||||||| || | |||||||||||| ||| ||| | |||| Sbjct 1332 AGTGGATTCTGATGGAAAGATTGCGGTTTTTTGGGAGAAGAAAGTGTGCCGTCCTATCGG 1391 Query 1044 CTCTGACAAGAAAATGATTTGGTGTACTGAGATTGCGCTTGAAAGGCGCAGTGCACACA- 1102 || | ||||||| |||||||||||| |||||||||| ||||||||||||| |||||| | Sbjct 1392 CTATAACAAGAAGATGATTTGGTGTGCTGAGATTGCCCTTGAAAGGCGCAATGCACA-AG 1450 Query 1103 AGATTTATGGGAAGATTGAGTGGTGTGATGTTGTGCTTACAGTGCCCAAGTCATGTTCTT 1162 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct 1451 AGATTTATGGGAAGATTGAGTGGTGTGATGTTGTGCTTACACTGCCCAAGTCATGTT-TT 1509 Query 1163 -TAT-TGGAATTTATTGCTGT 1181 ||| || | |||| |||||| Sbjct 1510 ATATATG-AGTTTAATGCTGT 1529 > Ahg943042 jgi|Araly1|943042|scaffold_603586.1 Length=1064 Score = 632 bits (342), Expect = 2e-180 Identities = 657/804 (82%), Gaps = 41/804 (5%) Strand=Plus/Plus Query 83 CGAGATTGTACTACCCGATTCTCTCCTTAGTTTCCAAGAGAT-TCCGCTCTCTCGTTGGA 141 |||||||||||||||||||||||||||||||||||||||||| || |||| ||| || | Sbjct 44 CGAGATTGTACTACCCGATTCTCTCCTTAGTTTCCAAGAGATATC-GCTCGCTCCTTACA 102 Query 142 TCACTTGAGCTTTACAAGATCCGAACGCTCCTAGGACGACGCACTGAGAATTGTCTTTAT 201 || |||||||||||| | |||||||||||| ||||||| | |||||||||||||||||| Sbjct 103 TCGCTTGAGCTTTACGATATCCGAACGCTCTTAGGACG-C--ACTGAGAATTGTCTTTAT 159 Query 202 CTGAGC-TTACGTTTCAGTTATGGATCTAACCCACGTTGGTTCACTCTATGCCGAAGACC 260 | | | |||||||| |||| || |||||| ||| ||||||||||| ||||||||| ||| Sbjct 160 GT-ATCCTTACGTTTGAGTTCTGAATCTAAGCCATGTTGGTTCACTTTATGCCGAAAACC 218 Query 261 AACTCGAACCCCTAGCCCTGAACC-TAACCTTAAGTCACGATGGTTCACATCCTGCTTTA 319 ||||| || ||| | |||| | || ||||| ||| |||||||||||||| || || |||| Sbjct 219 AACTCCAATCCCAAACCCT-AGCCGTAACCCTAACTCACGATGGTTCACGTCTTGTTTTA 277 Query 320 GACCAATCCTAACAAATC-TCACTAGG-GCCACTAGCAAGGAAGAAAAGAAGTTAAGTGA 377 ||||| | ||| || || | | | || ||||| || |||||||| |||| |||||| Sbjct 278 GACCA-TA-TAA-AA-TCCTAAAGAATCGC-ACTAGGAAAGAAGAAAACAAGTCAAGTGA 332 Query 378 AAA-TCTTATGGTCTCAATCCCGACTAGCAATGATTGTCCTCTGTCTGGCTTGACTTGTA 436 ||| | ||||||||||| |||| | | |||| |||||||||| || ||| |||||| ||| Sbjct 333 AAAGT-TTATGGTCTCAGTCCCAATTCGCAACGATTGTCCTCAGTTTGGGTTGACTAGTA 391 Query 437 --------AC-ACAATTGGTTCTTATATCTACATGATTGGGGGATACATAAATGGTGTGC 487 || |||||||||||| ||||||||||||| || || |||| |||||| | Sbjct 392 CCTTGGGTACCACAATTGGTTCTAATATCTACATGATCGGCGGCCACATCGATGGTGCGG 451 Query 488 TCTCATCTAGGGTCTTCTTCTTGGATTGTCGGTCTCACACCTGGCATGAAGCTCCAAGCA 547 |||| |||||||||||| ||||||| |||||||||||||||||||| ||||||||||||| Sbjct 452 TCTCGTCTAGGGTCTTCATCTTGGACTGTCGGTCTCACACCTGGCACGAAGCTCCAAGCA 511 Query 548 TGCAGGTAG-CCCGAAAGTCCCCACTCGTGAA-TGTTCTTGATGGGAAAATATATGTAGT 605 ||||| | | ||||||||| ||||||||| || |||||||||||| ||||||||||| || Sbjct 512 TGCAGAT-GTCCCGAAAGTGCCCACTCGT-AAGTGTTCTTGATGGAAAAATATATGTCGT 569 Query 606 GGAAGGCTGGAGAGGTT-CCGATTACTCGAATCTCATCGAGATTTTCGATCCCAAAACCC 664 ||| || || | ||| ||||| ||||||| | |||||| ||||||||||||||| || Sbjct 570 GGACCGCAAGA-ATGTTGCCGATCCCTCGAATTTGATCGAGTTTTTCGATCCCAAAATCC 628 Query 665 AAAAATGGGAACATGTGCCAAGCCCTAGCGCGGAGATGCGTGGGAGGTATATATCAA-AA 723 ||| |||||| ||||| |||| |||||||| |||| | |||||||| |||||| ||| || Sbjct 629 AAATATGGGAGCATGTTCCAATCCCTAGCGAGGAGTTACGTGGGAGTTATATAACAAGAA 688 Query 724 GGTTTAGT-CTATGAAGAAAAACTTTACCTGTTTGGGGATAAAAATGTGGTTTACAAGCC 782 | |||||| || || ||||||||||||||||||||| |||||| | |||||||||||| Sbjct 689 G-TTTAGTTCT-TGGCGAAAAACTTTACCTGTTTGGGTATAAAAGTACGGTTTACAAGCC 746 Query 783 TAAGGAA-AGTAGATGGGATGC-GTTAGGGTTTGATATGAATTTGTGGTTGGTTAGCTAT 840 ||| ||| | | |||||||| || ||| || || | | |||| | | |||| || || Sbjct 747 TAAAGAACAA-ATATGGGATGTAGT-AGGATTGGAGAAGTGTTTGCGCTGGGTTCGCAAT 804 Query 841 GGTTCTTCTTGCGTGATAGATAAT 864 |||||||||||||||||||||| Sbjct 805 TCTTCTTCTTGCGTGATAGATAAT 828 > Ahg943045 jgi|Araly1|943045|scaffold_603589.1 Length=320 Score = 248 bits (134), Expect = 7e-65 Identities = 210/245 (86%), Gaps = 11/245 (4%) Strand=Plus/Plus Query 1 ATGATGAACGGCATAA-AGTCTTCACCGTGTAATATGCCTTACCTTCCTGATGATTTACT 59 |||| |||||||| || |||||||| ||| |||||||||||||||||| |||||| |||| Sbjct 21 ATGACGAACGGCA-AAGAGTCTTCAACGTTTAATATGCCTTACCTTCCAGATGATATACT 79 Query 60 ATTAAACAT-CTTAGGC-CGTGTCTCGAGATTGTACTACCCGATTCTCTCCTTAGTTTCC 117 || || | |||| || ||||||||||||||||||||||| |||||||||||||||||| Sbjct 80 GTTGCAC-TGCTTA-GCTCGTGTCTCGAGATTGTACTACCCAATTCTCTCCTTAGTTTCC 137 Query 118 AAGAGATTCCGCTCTCTCGTTGGATCACTTGAGCTTTACAAGATCCGAAC-GCTCCTAGG 176 |||||||||||||||||||||| ||||||||||||| || | ||||||| | || |||| Sbjct 138 AAGAGATTCCGCTCTCTCGTTGCATCACTTGAGCTTCACGACATCCGAATAG-TCTTAGG 196 Query 177 ACGACGCACTGAGAATTGTCTTTATCTGAGCTTACGTTTCAGTTATGGATCTAACCCACG 236 ||| | | | ||||||||||||||| || ||||| |||||||| || |||||| ||| | Sbjct 197 ACG-CAC-C-GAGAATTGTCTTTATATGTGCTTATATTTCAGTTCTGAATCTAAGCCATG 253 Query 237 TTGGT 241 ||||| Sbjct 254 TTGGT 258 > Ahg354756 jgi|Araly1|354756|fgenesh1_pg.C_scaffold_7001929 Length=1116 Score = 215 bits (116), Expect = 7e-55 Identities = 213/259 (82%), Gaps = 10/259 (4%) Strand=Plus/Plus Query 455 TCTACATGATTGGGGGATACATAAATGGTGTGCTC-TCATCTAGGGTCTTCTTCTTGGAT 513 ||||||| ||||| |||||||| || |||| || | || |||||||| ||| || |||| Sbjct 413 TCTACATTATTGGCGGATACATCAACGGTGAGC-CATCGTCTAGGGTATTCGTCATGGAC 471 Query 514 TGTCGGTCTCACACCTGGCATGAAGCTCCAAGCATGCAGGTAGC-CCGAAAGTCCCCACT 572 |||||||||||||||||||| |||||||||||||||| ||| || | ||| ||||| || Sbjct 472 TGTCGGTCTCACACCTGGCACGAAGCTCCAAGCATGCGGGTGGCTCGGAATTTCCCC-CT 530 Query 573 CGTGAATGTTCTTGATGGGAAAATATATGTAGTGGAAGGCTG-GAGAGGTTCCGATTACT 631 ||||| || | ||||||||||||||||||||||||||||||| || | || | || || Sbjct 531 CGTGAGTGCTGTTGATGGGAAAATATATGTAGTGGAAGGCTGCGACAA-TTGCAATCCCT 589 Query 632 C-GAATCTCATCGAGATTTTCGATCCCAAAACCCAAAAATGGGAACATGTGCCAAGCCCT 690 | |||| | || ||| ||||||||||||||||||| | ||||| |||||||||||||| Sbjct 590 CAGAATTT-ATGGAGTTTTTCGATCCCAAAACCCAGATGTGGGAGCATGTGCCAAGCCC- 647 Query 691 AGC-GCGGAGATGCGTGGG 708 || || ||||| || ||| Sbjct 648 AGGAGCAGAGATACGCGGG 666 Score = 154 bits (83), Expect = 1e-36 Identities = 211/270 (78%), Gaps = 19/270 (7%) Strand=Plus/Plus Query 18 GTCTTCACC-GTGTAATATGCCTTACCTTCCTGATGATTTACTATTAAACAT-CTTAGGC 75 ||| ||||| || |||||| || || || ||||||||| ||||||| ||| | ||||| | Sbjct 24 GTCGTCACCGGT-TAATATTCCATATCTCCCTGATGATATACTATTGAAC-TGCTTAGCC 81 Query 76 CGTGTCTCGAGATTGTACTACCCGATTCTCTCCTTAGTTTCCAAGAGATTCCGCTCTCTC 135 || ||||| |||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 82 CGCGTCTCAAGATTGTACTACCCAACTCTCTCCTTAGTTTCCAAGAGATTCCGCTCTCTC 141 Query 136 GTTGGATC-ACTTGAGCTTTACAAGATCCGAACGCTCCTAGGACGACGCACTGAGAATTG 194 | | || || ||||||||| ||| ||||| ||| |||| | | |||| |||| ||| Sbjct 142 CTCGCTTCGACA-GAGCTTTACGAGACCCGAAGGCTATTAGG-C-A-GCACCGAGAGTTG 197 Query 195 TCTTTATCTGAGCTTAC-GTTTCA-GTTATGGATCTAACCCACGTTGGTTCACTCT-ATG 251 || ||| | |||| ||| | | | | ||||| ||||||||||| ||||| | | Sbjct 198 TCCCTATGTCTCCTTAATGTTCCCTGGCA-GC-TCTAAGCCACGTTGGTTTACTCTGA-G 254 Query 252 CCGAAG-ACCAACTCGAA-CCCCTAGCCCT 279 ||| | ||||||||||| |||| | |||| Sbjct 255 CCGT-GTACCAACTCGAATCCCCAA-CCCT 282 Score = 137 bits (74), Expect = 1e-31 Identities = 200/260 (77%), Gaps = 11/260 (4%) Strand=Plus/Plus Query 939 TTTGGAAAAATTACCTAAATTACGACATCGTCGTTCTTGTATTAGAATGGTGGATTATGG 998 |||||| ||| | |||||||||| | | || | | || |||| ||| | ||| ||| Sbjct 861 TTTGGAGAAACTGCCTAAATTACCAAAGGGTTATGGTCGTGTTAGGTTGGAGAATTGTGG 920 Query 999 TGGAAAGATTGCGATTCTGTGGGAGAAGAAAGTGCGTGTTGTCGGCTCTGA-CAAG-A-A 1055 |||||| ||| | || | |||||| |||| || |||| | | || ||| | |||| | | Sbjct 921 TGGAAATATTTTGGTTTTTTGGGAGGAGAATGTCCGTGCTATTGGTTCT-ACCAAGAAGA 979 Query 1056 A-ATGATTTGGTGTACTGAGATTGCGCTTGAAAGGCGCAGTGCACACA--AGATTTATGG 1112 | |||||||||||| |||| ||||| ||||||| || | || | | || ||||||| Sbjct 980 AGATGATTTGGTGTGTTGAGGTTGCGATTGAAAGACG-A-AACAGAGATGAGGTTTATGG 1037 Query 1113 GAAGATTGAGTGGTGTGATGTTGTGCTTACAGTGCCCAAGTCATGTTCTTTATT-GGAAT 1171 |||| |||||||||||||||||||||||||||| ||||||||||||||||| | ||||| Sbjct 1038 GAAGGTTGAGTGGTGTGATGTTGTGCTTACAGTCCCCAAGTCATGTTCTTT-TGAGGAAT 1096 Query 1172 TTATTGCTGTTACTATTTGA 1191 || ||| || ||| ||||| Sbjct 1097 TTGTTGTTGCCACTGTTTGA 1116 > Ahg333104 jgi|Araly1|333104|fgenesh1_pm.C_scaffold_34000003 Length=1119 Score = 93.5 bits (50), Expect = 3e-18 Identities = 150/195 (77%), Gaps = 19/195 (10%) Strand=Plus/Plus Query 85 AGATTGTACTACCCGATTCTCTCCTTAGTTTCCAAGAGAT-TCCGCTCTCTCGTTGGATC 143 ||||||||||||||||||||||||||||| |||||||| | || | | ||||||| || Sbjct 103 AGATTGTACTACCCGATTCTCTCCTTAGTCTCCAAGAGCTGTC-GAACCCTCGTTGCTTC 161 Query 144 ACTTGAGCTTTACAAGA-TCCGAACGCTCCT-AGGACGACGCACTGAGAATTGTCTTTAT 201 || ||||||||||||| || || | || | | || ||||| |||| |||||| ||| Sbjct 162 ACCGGAGCTTTACAAGACTC-GATCTTTCTTCA--AC--CGCACGGAGAGTTGTCTCTAT 216 Query 202 CTGAGCTTACGT-TTCAGTTATGGATC-TAACCCACGTTGGTT--CACTCTATGCCGAAG 257 || ||||| | ||| | || | | ||||||||||||||| ||||||| ||||| Sbjct 217 GTGTGCTTA-GAATTCCCTCCTG-ACCCTAACCCACGTTGGTTTACACTCTA--CCGAAA 272 Query 258 ACC-AACTCGAACCC 271 ||| || || ||||| Sbjct 273 ACCTAA-TCAAACCC 286 > Ahg931187 jgi|Araly1|931187|scaffold_303644.1 Length=446 Score = 91.6 bits (49), Expect = 1e-17 Identities = 70/80 (88%), Gaps = 2/80 (3%) Strand=Plus/Plus Query 43 CTTCCTGATGATTTACTATTAAACAT-CTTAGGCCGTGTCTCGAGATTGTACTACCCGAT 101 |||||| ||||||| |||||||| | ||||| || || |||||||||||||||||||| Sbjct 58 CTTCCTAATGATTTGGTATTAAAC-TGCTTAGCCCACGTTTCGAGATTGTACTACCCGAT 116 Query 102 TCTCTCCTTAGTTTCCAAGA 121 |||||||||||||||| ||| Sbjct 117 TCTCTCCTTAGTTTCCCAGA 136 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 44451321222 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5