BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G11800.1
Length=3540
Score E
Sequences producing significant alignments: (Bits) Value
Ahg945818 jgi|Araly1|945818|scaffold_702047.1 3103 0.0
Ahg895377 jgi|Araly1|895377|Al_scaffold_0006_3373 2604 0.0
> Ahg945818 jgi|Araly1|945818|scaffold_702047.1
Length=3093
Score = 3103 bits (1680), Expect = 0.0
Identities = 2634/3091 (85%), Gaps = 80/3091 (3%)
Strand=Plus/Plus
Query 372 GCTATGGTCTCTGA-AAGGCATTCTGCTCGTTTATATA-ATTCCCTCCCA-ATGGAGAGT 428
||||||| |||||| || ||||||||||||||| | || || ||| | | ||||||||
Sbjct 22 GCTATGGGCTCTGATAA-GCATTCTGCTCGTTT-TCTACATAACCT-CAAGATGGAGAGG 78
Query 429 TTCAGAACGATTTTAACCCATACTTACCCTTATCCGCATGAGCATTCACGTCATGCTATC 488
|||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 79 GTCAGAACGATCCTAACCCATACTTACCCTTATCCCCATGAGCATTCACGTCATGCTATG 138
Query 489 ATTGCTGT-ATTGTTTGGTTGCCTATTCTTTATTTCATCGGATAACATGCAAACCCTCAT 547
|||||||| ||| || |||||| | ||||||||||| ||||| |||||||| | |||| |
Sbjct 139 ATTGCTGTGATT-TTGGGTTGCTTGTTCTTTATTTCGTCGGAGAACATGCACAGCCTCGT 197
Query 548 AGAAAAGTT-----TTCA-GTCAAGTGGTGGTCCATGTATGCATGCTTGCTCGGATTCTT 601
||||||||| | | |||||||||||||||||||||| |||||||| ||||| ||
Sbjct 198 AGAAAAGTTGGACAATAATTTCAAGTGGTGGTCCATGTATGCCTGCTTGCTTGGATTTTT 257
Query 602 CTACTTCTTTTCTTCCCCATTTATCCAG-AAGACTATCAGACCAAATTATTCAAACTTCA 660
||| |||||||| || ||||| || ||| ||||||||| |||||| || |||| |||||
Sbjct 258 CTATTTCTTTTCATCTCCATTCAT-CAGAAAGACTATCCGACCAAGCTACTCAACCTTCA 316
Query 661 GTCGGTGGTACATTGCCTGGATTTTAGTTGCAGCTTTGTATCATCTTCCTAA-TTTTCAG 719
|||||||||||||||| ||||||||||||||||||||||| |||| ||| || |||||||
Sbjct 317 GTCGGTGGTACATTGCTTGGATTTTAGTTGCAGCTTTGTACCATC-TCCCAAGTTTTCAG 375
Query 720 TCAATGGGTTTGGATTTGAGGATGAATTTGTCCTTGTTTCTAACAATTTACATATCATCC 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 376 TCAATGGGTTTGGATTTGAGGATGAATTTGTCCTTGTTTCTAACAATTTACATATCATCC 435
Query 780 ATACTCTTCCTTGTTGTCTTCCACATCATTTTTCTTGGCCTTTGGTATGTTGGTCTTGTT 839
||| |||||||| ||||||| ||||| |||||||||| ||||||||| |||||||||||
Sbjct 436 ATAGTCTTCCTTCTTGTCTTTCACATTGTTTTTCTTGGGCTTTGGTATATTGGTCTTGTT 495
Query 840 TCTCGCGTGGCTGGAAGACGCCCAGAGATCTTAACCATTCTTCAAAACTGCGCTGTTCTT 899
||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 496 TCTCGTGTGGCTGGAAGACGCCCAGAGATCTTAACCATTCTTCAAAGTTGTGCTGTTCTT 555
Query 900 AGCATGGCTTGCTGTATATTT-TATAGCCATTGTGGTAATCGAGCTGTTCTGAGGCAAAA 958
||||| | |||||||| ||| || ||||||||||||||||| ||| ||| ||||||||
Sbjct 556 AGCATATCGTGCTGTAT-TTTCTACAGCCATTGTGGTAATCGTGCTTTTCAGAGGCAAAC 614
Query 959 ACCACTTGGAAGACAGT-ATACAAGCTGGTTTTCGTTCTGGAAAAGAGAACATAGGCA-C 1016
||| || | |||| || || | ||| ||||||| || |||||| ||||| || || | |
Sbjct 615 ACCCCTCGAAAGA-AGGCATGCTAGCCGGTTTTCATTATGGAAAGGAGAAGAT-GGAAAC 672
Query 1017 AATACCTGGCTTGCAAAATTCATTCGTAT-GAATGAGCTGAA-AGACCAAGTGTGTTCAT 1074
| ||| ||||||| ||||| | || || || |||||| || ||||||||| || ||||
Sbjct 673 AGTACTTGGCTTGTGAAATTTACTCACATTGA-TGAGCT-AAGAGACCAAGTCTGCTCAT 730
Query 1075 CGTGGTTTGCTCCAGTTGGATCTGCAAGTGATTATCCACTGTTATCCAAATGGTTCATCT 1134
| ||||||||||| |||||||||||| ||||||||||||| || ||||||||| |||| |
Sbjct 731 CATGGTTTGCTCCTGTTGGATCTGCACGTGATTATCCACTATTGTCCAAATGGGTCATTT 790
Query 1135 ACGGGGAGATTG-CATGCAACGGATCATGTCCTGATTCAGCTGACGAAATTTCTCCTATA 1193
| |||||| ||| ||||||| || || |||||||||||| |||| |||||||||||||||
Sbjct 791 ATGGGGAG-TTGGCATGCAATGGGTCTTGTCCTGATTCATCTGATGAAATTTCTCCTATA 849
Query 1194 TACTCGTTGTGGGCCACATTTATCGGTCTTTACATTGCCAATTATGTAGTGGAGAGATCA 1253
|||||||||||||| || ||||| || ||||||||||| |||||||||||||||||||||
Sbjct 850 TACTCGTTGTGGGCAACGTTTATTGGCCTTTACATTGCTAATTATGTAGTGGAGAGATCA 909
Query 1254 ACAGGGTGGGCTCTAACACATCCTCTGTCAGTCGACAAAT-ATGAGAAGCTGAAGAATCA 1312
|||||||||||||| ||||||||||||| ||||| |||| |||||||| |||||| ||
Sbjct 910 ACAGGGTGGGCTCTGGCACATCCTCTGTCTGTCGA-AAATTATGAGAAGTTGAAGAGGCA 968
Query 1313 GCAATTGAAACCTGATTTCTTAGATATGGTTCCTTGGTATTCAGGAACATCGGCTGATTT 1372
||| |||||||| |||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 969 ACAAATGAAACCTAATTTCTTAGATATGGTTCCTTGGTATTCAGGAACTTCAGCTGATTT 1028
Query 1373 GTTTAAAACCGTGTTTGACCTCCTCGTGTCAGTGACAGTATTTCTTGGCCGCTTTGACAT 1432
||||||||| ||||||||||||||||| |||||||| || ||||||||||||||||||||
Sbjct 1029 GTTTAAAACTGTGTTTGACCTCCTCGTATCAGTGACTGTCTTTCTTGGCCGCTTTGACAT 1088
Query 1433 GCGGATGCTGCAGGCTGCAATGACCAAATCTGGTGATGCTAGTGGGAGGAAGGAACTTTT 1492
||| ||| ||||||||||||||||||||| | |||||| | ||| |||||||||||
Sbjct 1089 GCGAATGATGCAGGCTGCAATGACCAAATATTGTGATGGAAACAAGAGCAAGGAACTTTT 1148
Query 1493 GTATGACCACCTTGCTGAAAAG-CAAGATTTTTGGTTTGATTTCATGGCGGATACTGGTG 1551
||||| || || |||| ||| | || || |||||||| |||||||||||||||||||
Sbjct 1149 ATATGATCATTTTACTGATAAGACT-GACTTCTGGTTTGACTTCATGGCGGATACTGGTG 1207
Query 1552 ATGGTGGGAATTCATCATATAGTGTTGCAAAACTTCTTGCCCAGCCTTCTCTCAGAGTGC 1611
||||||| |||||||||||| ||| || |||||||| || ||||||| | ||| ||| |
Sbjct 1208 ATGGTGGAAATTCATCATATTCTGTCGCGAAACTTCTAGCTCAGCCTTTTATCAAAGTCC 1267
Query 1612 CAG-TGGCTAATAATTTTATATCTCTTCCACGAGGAAATGTACTGCTTATTGGAGGAGAT 1670
| | | | ||| ||||||||||||| | | || || ||||||||||||| ||||||
Sbjct 1268 C-GCTAGAGAATGATTTTATATCTCTAGAAAGGGGTAACATACTGCTTATTGGGGGAGAT 1326
Query 1671 CTTGCATACCCAAATCCGTCATCTTTTACATATGAAAAACGTCTCTTTTGTCCTTTTGAG 1730
||||||||||| ||||| ||| | |||||||||||||||||||| |||||||||||||||
Sbjct 1327 CTTGCATACCCCAATCCATCAGCGTTTACATATGAAAAACGTCTATTTTGTCCTTTTGAG 1386
Query 1731 TATGCGCTGCAGCCTCCCCGTTGGTATAAAAATGACTCTATTGCTGTTGACAAGCCTGAA 1790
|||||||| || ||||||| ||||||||||| || || ||| ||||| |||||||||||
Sbjct 1387 TATGCGCTCCAACCTCCCCATTGGTATAAAACGGATTCAATTTCTGTTAACAAGCCTGAA 1446
Query 1791 TTACCCAATGGAGTGTCTGATCTGAAG-AGTTATGAAGGTCCTCAATGTTTTCTCATCCC 1849
||||| |||| ||||||||||||||| | |||||| ||||||||||| ||||| |||||
Sbjct 1447 TTACCTGATGGGGTGTCTGATCTGAAGCA-TTATGATGGTCCTCAATGCTTTCTTATCCC 1505
Query 1850 TGGAAACCATGACTGGTTTGACGGACTCAATACTTTCATGAGGTATATTTGCCATAAGAG 1909
|||||||||||||||||| || ||||| |||||||| ||||||||| | |||||||| ||
Sbjct 1506 TGGAAACCATGACTGGTTCGATGGACTAAATACTTTTATGAGGTATGTATGCCATAAAAG 1565
Query 1910 TTGGTTAGGCGGCTGGCTAATGCCCCAGAAGAAAAGCTATTTTGCCCTGCAGCTCCCCAA 1969
|||||| || |||||| | |||||||| ||||||||||||||||| |||||||| || ||
Sbjct 1566 TTGGTTGGGTGGCTGGTTTATGCCCCAAAAGAAAAGCTATTTTGCGCTGCAGCTACCTAA 1625
Query 1970 GGGTTGGTGGGTGTTTGGTTTGGATCTTGCACTTCATGGTGATATTGATGTCG-ACCAGT 2028
|| |||||||||||||||||||||||||| |||||||||||||||||||| | ||||||
Sbjct 1626 AGGATGGTGGGTGTTTGGTTTGGATCTTGCGCTTCATGGTGATATTGATGT-GTACCAGT 1684
Query 2029 TCAAAttt-ttttCCGAATTGGTGAAGGACAAGGTT-GGTGAGAGTGATGCTGTGATCAT 2086
|||| ||| ||||| ||||| |||||||| |||||| || |||| |||||| ||||||||
Sbjct 1685 TCAA-TTTCTTTTCTGAATTAGTGAAGGAGAAGGTTCGG-GAGAATGATGCAGTGATCAT 1742
Query 2087 TATCACGCATGAACCCAACTGGCTTCTTGATTGGTACTGGAGCGGTGATACAGGGCAGAA 2146
|||||| ||||| || |||||||||||||||||||| |||| | ||||| || ||||
Sbjct 1743 TATCACACATGAGCCGAACTGGCTTCTTGATTGGTATTGGAAAGACGATACTGGAAAGAA 1802
Query 2147 CGTGAGACATCTGATATGCGACGTGTTGAAAT-ACAGGTGCAAACTTAGAATGGCAGGGG 2205
| |||| || || |||| |||| | || ||| | || || ||||||||||||||||| |
Sbjct 1803 CATGAGGCACCTAATATTCGACTTTTTAAAAGGAAAG-TGTAAACTTAGAATGGCAGGAG 1861
Query 2206 ATTTGCATCATTATATGCGACATTCATGTAATCAATCGGATGGACCTGCCCATGTCCAAC 2265
||||||||||||||||||| |||||||||| |||||| |||||||||| ||||||| ||
Sbjct 1862 ATTTGCATCATTATATGCGTCATTCATGTACTCAATCAGATGGACCTGTTCATGTCCCAC 1921
Query 2266 ATCTTCTTGTTAATGGCTGTGGAGGAGCTTTTCTGCATCCCACCCATGTGTTCAGCAAG- 2324
|||| |||||||||||||||||||| |||||| |||||||||||||||||||| ||| |
Sbjct 1922 ATCTCCTTGTTAATGGCTGTGGAGGGGCTTTTTTGCATCCCACCCATGTGTTCCGCA-GC 1980
Query 2325 TTTTCAAAGTTCTATGGGGCCTCTTATGGAAGCAAGGT-TGCCTACCCCTCTTTTGATGA 2383
||||||||||| ||||| || ||||||| ||| || | ||| || || |||||||||||
Sbjct 1981 TTTTCAAAGTTTTATGGTGCTTCTTATGAAAGTAAA-TCTGCTTATCCTTCTTTTGATGA 2039
Query 2384 TTCAAGTAAAATTGCTTTGGGAAATATTTTGAAA-TTCCGGAAAAAGAACTGGCAATTTG 2442
|||||| | |||||||||||||||||||| ||| ||| |||||||||||||||||||||
Sbjct 2040 TTCAAGCAGGATTGCTTTGGGAAATATTTT-AAAGTTCAGGAAAAAGAACTGGCAATTTG 2098
Query 2443 ATTTCATTGGTGGTATTATATACTTTATCTTGGTCTTTTCGTTGTTCCCTCAGTGTAAGC 2502
||||||||||||| || ||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 2099 ATTTCATTGGTGGCATCATATACTTTCTCTTGGTCTTTTCCTTGTTCCCTCAGTGTAAGC 2158
Query 2503 TAG-CTCACGTCTTACGAGGTGATTCGTTTTCTGGTCACCTGGAGAGTTTCTTAGGCACA 2561
||| | || |||||||||||||||| |||||||| ||||||| ||||||||| ||||||
Sbjct 2159 TAGGC-CATATCTTACGAGGTGATTCATTTTCTGGCCACCTGGGGAGTTTCTTTGGCACA 2217
Query 2562 GTTTGGAG-TGCCTTTGCGTATGTGATGGAACAATCTTATGTGTCTTTTACCGGTGT-CT 2619
|||||||| | |||||| ||| || || || || || ||||||||||| || ||||| ||
Sbjct 2218 GTTTGGAGCT-CCTTTGTGTACGTAATAGAGCAGTCATATGTGTCTTTCACTGGTGTTCT 2276
Query 2620 TGATGTTGCTGATAACTGCAATCACATTTGTCCCCTCAAAAGTATCTCTGAAGAAAAGGG 2679
| |||||||| ||||||||||| | ||||| ||||||||| |||||| || |||| |
Sbjct 2277 T-ATGTTGCTAATAACTGCAATTATGTTTGTACCCTCAAAAATATCTCGGAGGAAACGAC 2335
Query 2680 TTGT-AATTGGGGTTCTTCATGTTGCTGCTCACCTGATGGCAGCTCTGATTCTCATGTTG 2738
| || |||||| ||||||||||| |||| ||||| | ||| ||| ||||||| ||||||
Sbjct 2336 T-GTTAATTGGAATTCTTCATGTTTCTGCACACCTTACGGCTGCTTTGATTCTTATGTTG 2394
Query 2739 ATGTTGGAACTGGGCATAGAAATCTGTATTCAGCATAATCTTCTTGCAAATTCTGGGTAT 2798
|||||||||| |||||||||||||||||||||||||| || ||||| | || ||||||
Sbjct 2395 CTGTTGGAACTCGGCATAGAAATCTGTATTCAGCATAAGCTCCTTGCGACCTCCGGGTAT 2454
Query 2799 CATACATTATATGAGTGGTACAAATCAGTGGAGAATGAGCA-TTTCCCGGACCCTACTGG 2857
|||||||| ||| |||||||||||||||| || || || || ||||| ||||||||||||
Sbjct 2455 CATACATTGTATCAGTGGTACAAATCAGTAGAAAACGAACACTTTCC-GGACCCTACTGG 2513
Query 2858 CCTTCGAGCCCGTATCGAACAATGGACATTTGGCTTATATCCTGCGTGCATCAAGTATCT 2917
||| |||| |||||| ||||| ||||| || || || |||||||| ||||||||||||||
Sbjct 2514 CCTCCGAGACCGTATTGAACAGTGGACGTTCGGATTTTATCCTGCCTGCATCAAGTATCT 2573
Query 2918 TATGTCAGCATTTGATGTTCCTGAGGTGATGGCGGTTACCCGGACCAACATTTG-CAA-A 2975
|||||||||||||||| |||||||||||||||||||||| ||||| ||||| || | | |
Sbjct 2574 TATGTCAGCATTTGATATTCCTGAGGTGATGGCGGTTACACGGACAAACATATGTCGAGA 2633
Query 2976 CATGGAATGGAATCGCTTTCCCGAAGCGGAGCTGTTATCTATTATGCTTCTGTTTTCCTT 3035
| |||||||| |||||||| ||||||||||| | ||||||||||||||||| |||||
Sbjct 2634 -A-GGAATGGAGTCGCTTTCTCGAAGCGGAGCAGCCATCTATTATGCTTCTGTCTTCCTC 2691
Query 3036 TACTTTTGGGTCTTCTCAACTCCTGTCGTGTCTATGGTATTT-GGAAGCTACTTGTATAT 3094
||||| |||||||||||||||||||| || ||| |||| ||| ||||| ||||| |||||
Sbjct 2692 TACTTCTGGGTCTTCTCAACTCCTGTTGTATCTTTGGT-TTTCGGAAGTTACTTATATAT 2750
Query 3095 CTGCATCAACTGG-TTCCACATACACTTTGATGAAGCTTTCTCTTCACTCCGCATTGCCA 3153
| |||||||||| ||| ||||||| ||||||||||| ||||||||||| || || ||||
Sbjct 2751 ATCCATCAACTGGCTTC-ACATACATTTTGATGAAGCATTCTCTTCACTTCGGATCGCCA 2809
Query 3154 ATTACAAATCTTTCACCCGGTTCCACATCCTAGAA-GATGGAGATATTGAAGTTTTCACG 3212
|||||||||| |||||||| ||||||||| || |||||||| ||||||| |||||
Sbjct 2810 ATTACAAATCATTCACCCGTTTCCACATCA-AGCCTGATGGAGACCTTGAAGTCTTCACC 2868
Query 3213 CTCGCAGTTGATAAGGTGCCAAAAGACTGGAAACTGGACAAAGACTGGGATTCAGAGCCG 3272
|||| ||| || ||||||||||| || ||||| |||||||| |||||||| ||||||||
Sbjct 2869 CTCGGAGTAGACAAGGTGCCAAAGGAATGGAAGCTGGACAAGGACTGGGACGCAGAGCCG 2928
Query 3273 AAA-CAGAGTTTCAAGATGAG-CTATGAGAGAGAG-TTTCCAAGTAAATGGGGTGCCTCA 3329
| | | || | | || ||||| | || | ||| || |||||||| |||||| |||| ||
Sbjct 2929 AGATC-GACTGTGAAAATGAGTC-ATCACAGA-AGGTTTCCAAGCAAATGGTGTGCAACA 2985
Query 3330 ACATCACAACAAGACCCTGTTAATACCGTAAAGATAGTGGATCGTTTCGTCATTCATAGA 3389
|||| || ||||| ||||| || ||||||||||| || |||| ||| || |||| ||||
Sbjct 2986 ACATTGCAGCAAGATCCTGTCAACACCGTAAAGATCGTAGATCATTTTGTTATTCGTAGA 3045
Query 3390 TCACA-AAAGGAAAACGGAGAATGTTAGATA 3419
||| | |||| ||| |||| ||||||||||
Sbjct 3046 TCAGAGAAAG-AAATTGGAGGATGTTAGATA 3075
> Ahg895377 jgi|Araly1|895377|Al_scaffold_0006_3373
Length=3084
Score = 2604 bits (1410), Expect = 0.0
Identities = 1510/1559 (97%), Gaps = 3/1559 (0%)
Strand=Plus/Plus
Query 1861 ACTGGTTTGACGGACTCAATACTTTCATGAGGTATATTTGCCATAAGAGTTGGTTAGGCG 1920
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct 1526 ACTGGTTTGACGGACTCAATACTTTCATGAGGTATATATGCCATAAGAATTGGTTAGGCG 1585
Query 1921 GCTGGCTAATGCCCCAGAAGAAAAGCTATTTTGCCCTGCAGCTCCCCAAGGGTTGGTGGG 1980
|||||||||||||||||||||||||||||||||| ||||| || |||||||| |||||||
Sbjct 1586 GCTGGCTAATGCCCCAGAAGAAAAGCTATTTTGCGCTGCATCTTCCCAAGGGATGGTGGG 1645
Query 1981 TGTTTGGTTTGGATCTTGCACTTCATGGTGATATTGATGTCGACCAGTTCAAAttttttt 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1646 TGTTTGGTTTGGATCTTGCACTTCATGGTGATATTGATGTCGACCAGTTCAAATTCTTTT 1705
Query 2041 CCGAATTGGTGAAGGACAAGGTTGGTGAGAGTGATGCTGTGATCATTATCACGCATGAAC 2100
|||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct 1706 CCGAATTGGTGAAGGACAAGGTTGGTGAGAATGATGCTGTGATTATTATCACGCATGAAC 1765
Query 2101 CCAACTGGCTTCTTGATTGGTACTGGAGCGGTGATACAGGGCAGAACGTGAGACATCTGA 2160
| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 1766 CAAACTGGCTTCTTGATTGGTACTGGAGCGGCGATACAGGGAAGAACGTGAGACATCTGA 1825
Query 2161 TATGCGACGTGTTGAAATACAGGTGCAAACTTAGAATGGCAGGGGATTTGCATCATTATA 2220
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1826 TCTGCGACGTTTTGAAATACAGGTGCAAACTTAGAATGGCAGGGGATTTGCATCATTATA 1885
Query 2221 TGCGACATTCATGTAATCAATCGGATGGACCTGCCCATGTCCAACATCTTCTTGTTAATG 2280
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1886 TGCGACATTCATGTAATCAATCAGATGGACCTGCCCATGTCCAACATCTTCTTGTTAATG 1945
Query 2281 GCTGTGGAGGAGCTTTTCTGCATCCCACCCATGTGTTCAGCAAGTTTTCAAAGTTCTATG 2340
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||
Sbjct 1946 GCTGTGGAGGAGCTTTTCTGCATCCCACTCATGTGTTCAGCAACTTTTCAAAGTTTTATG 2005
Query 2341 GGGCCTCTTATGGAAGCAAGGTTGCCTACCCCTCTTTTGATGATTCAAGTAAAATTGCTT 2400
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2006 GGGCCTCCTATGGAAGCAAGGTTGCCTACCCCTCTTTTGATGATTCAAGCAAAATTGCTT 2065
Query 2401 TGGGAAATATTTTGAAATTCCGGAAAAAGAACTGGCAATTTGATTTCATTGGTGGTATTA 2460
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2066 TGGGAAATATTTTGAAATTCCGGAAAAAGAACTGGCAATTTGATTTCATTGGTGGCATTA 2125
Query 2461 TATACTTTATCTTGGTCTTTTCGTTGTTCCCTCAGTGTAAGCTAGCTCACGTCTTACGAG 2520
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2126 TATACTTTATCTTGGTCTTTTCATTGTTCCCTCAGTGTAAGCTAGCTCACGTCTTACGAG 2185
Query 2521 GTGATTCGTTTTCTGGTCACCTGGAGAGTTTCTTAGGCACAGTTTGGAGTGCCTTTGCGT 2580
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2186 GTGATTCGTTTTCTGGTCACCTGGAGAGTTTCTTAGGCACAGTTTGGAGCGCCTTTGCGT 2245
Query 2581 ATGTGATGGAACAATCTTATGTGTCTTTTACCGGTGTCTTGATGTTGCTGATAACTGCAA 2640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2246 ATGTGATGGAACAATCTTATGTGTCTTTTACCGGTGTCTTGATGTTGCTGATAACTGCAA 2305
Query 2641 TCACATTTGTCCCCTCAAAAGTATCTCTGAAGAAAAGGGTTGTAATTGGGGTTCTTCATG 2700
| ||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||
Sbjct 2306 TTACATTTGTCCCCTCAAAAGTATCTCCGAAGAAAAGGGTTTTAATTGGAGTTCTTCATG 2365
Query 2701 TTGCTGCTCACCTGATGGCAGCTCTGATTCTCATGTTGATGTTGGAACTGGGCATAGAAA 2760
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2366 TTGCTGCTCACCTGATGGCTGCTCTGATTCTCATGTTGATGTTGGAACTGGGCATAGAAA 2425
Query 2761 TCTGTATTCAGCATAATCTTCTTGCAAATTCT---GGGTATCATACATTATATGAGTGGT 2817
||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct 2426 TCTGTATTCAGCATAATCTCCTTGCAAATTCTGCAGGGTATCATACATTATATGAGTGGT 2485
Query 2818 ACAAATCAGTGGAGAATGAGCATTTCCCGGACCCTACTGGCCTTCGAGCCCGTATCGAAC 2877
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2486 ACAAATCAGTGGAAAATGAGCATTTCCCGGACCCTACTGGCCTTCGAGCCCGGATCGAAC 2545
Query 2878 AATGGACATTTGGCTTATATCCTGCGTGCATCAAGTATCTTATGTCAGCATTTGATGTTC 2937
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2546 AATGGACGTTTGGCTTATATCCTGCGTGCATCAAGTATCTTATGTCAGCATTTGATGTTC 2605
Query 2938 CTGAGGTGATGGCGGTTACCCGGACCAACATTTGCAAACATGGAATGGAATCGCTTTCCC 2997
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2606 CTGAGGTGATGGCGGTTACCCGGACCAACATTTGCAAACATGGAATGGAATCACTTTCCC 2665
Query 2998 GAAGCGGAGCTGTTATCTATTATGCTTCTGTTTTCCTTTACTTTTGGGTCTTCTCAACTC 3057
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 2666 GAAGCGGAGCTGTTATCTATTATGCTTCTGTCTTCCTTTACTTTTGGGTTTTCTCAACTC 2725
Query 3058 CTGTCGTGTCTATGGTATTTGGAAGCTACTTGTATATCTGCATCAACTGGTTCCACATAC 3117
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2726 CTGTAGTGTCTATGGTATTTGGAAGCTACTTGTATATCTGCATCAACTGGTTCCACCTAC 2785
Query 3118 ACTTTGATGAAGCTTTCTCTTCACTCCGCATTGCCAATTACAAATCTTTCACCCGGTTCC 3177
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2786 ACTTTGATGAAGCTTTCTCTTCACTCCGCATTGCCAATTACAAATCTTTCACCCGTTTCC 2845
Query 3178 ACATCCTAGAAGATGGAGATATTGAAGTTTTCACGCTCGCAGTTGATAAGGTGCCAAAAG 3237
||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||
Sbjct 2846 ACATCCTAGAAGATGGAGACATTGAAGTTTTCACACTTGCAGTTGATAAGGTGCCAAAAG 2905
Query 3238 ACTGGAAACTGGACAAAGACTGGGATTCAGAGCCGAAACAGAGTTTCAAGATGAGCTATG 3297
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2906 ACTGGAAACTGGACAAAGATTGGGATTCAGAGCCGAAACAGAGTTTCAAGATGAGCTATG 2965
Query 3298 AGAGAGAGTTTCCAAGTAAATGGGGTGCCTCAACATCACAACAAGACCCTGTTAATACCG 3357
||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |
Sbjct 2966 AGAGAGAGTTTCCAAGTAAATGGGGTGCCTCAACAGCCCAACAAGACCCTGTTAATACGG 3025
Query 3358 TAAAGATAGTGGATCGTTTCGTCATTCATAGATCACAAAAGGAAAACGGAGAATGTTAG 3416
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3026 TAAAGATAGTTGATCGTTTCGTCATTCATAGATCACAAAAGGAAAACGGAGAATGTTAG 3084
Score = 2501 bits (1354), Expect = 0.0
Identities = 1442/1486 (97%), Gaps = 0/1486 (0%)
Strand=Plus/Plus
Query 375 ATGGTCTCTGAAAGGCATTCTGCTCGTTTATATAATTCCCTCCCAATGGAGAGTTTCAGA 434
||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 1 ATGGTCTCTGACGGGCATTCTGCTCGTTTATATAATTCTCTCCCAATGGAGAGGGTCAGA 60
Query 435 ACGATTTTAACCCATACTTACCCTTATCCGCATGAGCATTCACGTCATGCTATCATTGCT 494
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 ACGATTCTAACCCATACCTACCCTTATCCGCATGAGCATTCACGTCATGCTATCATTGCT 120
Query 495 GTATTGTTTGGTTGCCTATTCTTTATTTCATCGGATAACATGCAAACCCTCATAGAAAAG 554
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GTATTCTTTGGTTGCCTATTCTTTATTTCATCGGATAACATGCAAACCCTCATAGAAAAG 180
Query 555 TTTTCAGTCAAGTGGTGGTCCATGTATGCATGCTTGCTCGGATTCTTCTACTTCTTTTCT 614
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 181 TTTTCAGTCAAGTGGTGGTCCATGTATGCATGCTTGCTCGGATTTTTCTACTTCTTTTCT 240
Query 615 TCCCCATTTATCCAGAAGACTATCAGACCAAATTATTCAAACTTCAGTCGGTGGTACATT 674
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 TCTCCATTTATCCAGAAGACTATCAGACCAAATTATTCAAACTTCAGTCGGTGGTACATT 300
Query 675 GCCTGGATTTTAGTTGCAGCTTTGTATCATCTTCCTAATTTTCAGTCAATGGGTTTGGAT 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 GCCTGGATTTTAGTTGCAGCTTTGTATCATCTTCCTAATTTTCAGTCAATGGGTTTGGAT 360
Query 735 TTGAGGATGAATTTGTCCTTGTTTCTAACAATTTACATATCATCCATACTCTTCCTTGTT 794
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 361 TTGAGGATGAATTTGTCCTTGTTTCTAACAATTTACATCTCTTCCATACTCTTCCTTGTT 420
Query 795 GTCTTCCACATCATTTTTCTTGGCCTTTGGTATGTTGGTCTTGTTTCTCGCGTGGCTGGA 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 GTCTTCCACATCATTTTTCTTGGCCTTTGGTATGTTGGTCTTGTTTCTCGCGTGGCTGGA 480
Query 855 AGACGCCCAGAGATCTTAACCATTCTTCAAAACTGCGCTGTTCTTAGCATGGCTTGCTGT 914
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 481 AGACGCCCAGAGATCTTAACCATTCTTCAAAATTGCGCTGTTCTTAGCATGGCTTGCTGT 540
Query 915 ATATTTTATAGCCATTGTGGTAATCGAGCTGTTCTGAGGCAAAAACCACTTGGAAGACAG 974
|||||||| ||||||||||||||||||||| || |||||||||||||| |||||||||||
Sbjct 541 ATATTTTACAGCCATTGTGGTAATCGAGCTATTTTGAGGCAAAAACCAGTTGGAAGACAG 600
Query 975 TATACAAGCTGGTTTTCGTTCTGGAAAAGAGAACATAGGCACAATACCTGGCTTGCAAAA 1034
||| | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 601 TATTCTAGCTGGTTTTCGTTTTGGAAAAGAGAACATAGGCACAATACATGGCTTGCAAAA 660
Query 1035 TTCATTCGTATGAATGAGCTGAAAGACCAAGTGTGTTCATCGTGGTTTGCTCCAGTTGGA 1094
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 661 TTCATTCGTATGAATGAGCTGAAAGACCAAGTGTGTTCGTCGTGGTTTGCTCCAGTTGGA 720
Query 1095 TCTGCAAGTGATTATCCACTGTTATCCAAATGGTTCATCTACGGGGAGATTGCATGCAAC 1154
|||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 721 TCTGCAAGTGATTATCCACTGTTATCCAAATGGTTCATTTACGGGGAGATCGCATGCAAT 780
Query 1155 GGATCATGTCCTGATTCAGCTGACGAAATTTCTCCTATATACTCGTTGTGGGCCACATTT 1214
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 781 GGATCATGTCCTGATTCAGCTGACGAAATTTCTCCTATATACTCATTGTGGGCCACATTT 840
Query 1215 ATCGGTCTTTACATTGCCAATTATGTAGTGGAGAGATCAACAGGGTGGGCTCTAACACAT 1274
||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 841 ATCGGTCTTTACATTGCCAATTATGTAGTGGAGAGATCAACTGGGTGGGCTCTGACACAC 900
Query 1275 CCTCTGTCAGTCGACAAATATGAGAAGCTGAAGAATCAGCAATTGAAACCTGATTTCTTA 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 CCTCTGTCAGTCGACAAATATGAGAAGCTGAAGAATCAGCAATTGAAACCTGATTTCTTA 960
Query 1335 GATATGGTTCCTTGGTATTCAGGAACATCGGCTGATTTGTTTAAAACCGTGTTTGACCTC 1394
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 961 GATATGGTTCCTTGGTATTCAGGAACATCGGCTGATTTGTTTAAAACAGTGTTTGACCTC 1020
Query 1395 CTCGTGTCAGTGACAGTATTTCTTGGCCGCTTTGACATGCGGATGCTGCAGGCTGCAATG 1454
||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct 1021 CTCGTGTCAGTGACAGTATTTGTTGGCCGTTTTGACATGCGGATGCTGCAGGCTGCAATG 1080
Query 1455 ACCAAATCTGGTGATGCTAGTGGGAGGAAGGAACTTTTGTATGACCACCTTGCTGAAAAG 1514
||||||||||||||||||| ||| |||||||||||||| ||||| ||||||||||| |||
Sbjct 1081 ACCAAATCTGGTGATGCTACTGGAAGGAAGGAACTTTTATATGATCACCTTGCTGATAAG 1140
Query 1515 CAAGATTTTTGGTTTGATTTCATGGCGGATACTGGTGATGGTGGGAATTCATCATATAGT 1574
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1141 CAAGATTTTTGGTTTGATTTCATGGCGGATACTGGTGATGGTGGTAATTCATCATATAGT 1200
Query 1575 GTTGCAAAACTTCTTGCCCAGCCTTCTCTCAGAGTGCCAGTGGCTAATAATTTTATATCT 1634
||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 1201 GTTGCAAAACTTCTTGCTCAGCCATCTCTCAGAGTGCCAGTGGCTGATAATTTTATATCT 1260
Query 1635 CTTCCACGAGGAAATGTACTGCTTATTGGAGGAGATCTTGCATACCCAAATCCGTCATCT 1694
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1261 CTTCCACGAGGCAATGTACTGCTTATTGGAGGAGATCTTGCATACCCAAATCCGTCAGCT 1320
Query 1695 TTTACATATGAAAAACGTCTCTTTTGTCCTTTTGAGTATGCGCTGCAGCCTCCCCGTTGG 1754
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1321 TTTACATATGAAAAACGTCTCTTTTGTCCGTTTGAGTATGCGCTGCAGCCTCCCCGTTGG 1380
Query 1755 TATAAAAATGACTCTATTGCTGTTGACAAGCCTGAATTACCCAATGGAGTGTCTGATCTG 1814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1381 TATAAAAATGACTCTATTGCTGTTGACAAGCCTGAATTACCCAATGGAGTGTCTGATCTG 1440
Query 1815 AAGAGTTATGAAGGTCCTCAATGTTTTCTCATCCCTGGAAACCATG 1860
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1441 AAGAGTTATGAAGGTCCTCAATGTTTTCTCATCCCTGGAAACCATG 1486
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 133696253949
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5