BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G11950.1 Length=984 Score E Sequences producing significant alignments: (Bits) Value Ahg490013 jgi|Araly1|490013|fgenesh2_kg.6__3147__AT4G11950.1 1445 0.0 Ahg923226 jgi|Araly1|923226|scaffold_104507.1 769 0.0 Ahg950465 jgi|Araly1|950465|scaffold_802352.1 649 0.0 Ahg341528 jgi|Araly1|341528|fgenesh1_pg.C_scaffold_3001291 619 1e-176 Ahg945829 jgi|Araly1|945829|scaffold_702058.1 507 8e-143 Ahg334065 jgi|Araly1|334065|fgenesh1_pg.C_scaffold_1000630 494 6e-139 Ahg915980 jgi|Araly1|915980|Al_scaffold_0008_731 259 3e-68 > Ahg490013 jgi|Araly1|490013|fgenesh2_kg.6__3147__AT4G11950.1 Length=965 Score = 1445 bits (782), Expect = 0.0 Identities = 914/977 (94%), Gaps = 12/977 (1%) Strand=Plus/Plus Query 1 ATGGGCTCTATACCATTTATCTTCATCATCCTTCTTTTTCATGTACATAAATCCAAATCT 60 ||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| Sbjct 1 ATGGGCTCTATACCATTCATCTTCATCATTCTTCTTTTTCACGTACATAAATCCAAATCT 60 Query 61 CAGACCATTGAATCAGCACATTTTCTTGATCTTATGATCAGAGATTACACCATTAGAAAC 120 ||||| || ||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct 61 CAGACGATAGAATCAGCACATTTTCTTGATCTTATGATAAGAGATTACACCATCAGAAAC 120 Query 121 TTCAACATACATTTCAAGACAGGTGCTATCCAGAAAGTCCATCTTCCTTCGAATTTCTCC 180 |||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 121 TTCAACATTCATTTCAAGACAGGAGCGATCCAGAAAGTCCATCTTCCTTCGAATTTCTCC 180 Query 181 TCCATTGATATCGCCACAGCTAAGTTTAGATGTGGGAGTTTGAGAAGACACGGTGCAAGA 240 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 181 TCCATTGATATCGCCACGGCTAAGTTTAGATGTGGGAGTTTGAGAAGACACGGTGCAAGA 240 Query 241 ATTGGAGAGTTTCACTTAGGTCCGGGCTTGACCGTGGAGCCATGTGTTGAGAGAGTGATC 300 || || |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 241 ATCGGTGAGTTTCACTTAGGTCCGGGCTTGACGGTGGAGCCATGTGTTGAGAGAGTGATT 300 Query 301 CTGGTGAGACAGAACTTGGGGTTTAACTGGTCTTCTTATATTTACTCAACCGGTTATAAC 360 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 301 CTGGTGAGACAGAACTTGGGTTTTAATTGGTCTTCTTATATTTACTCAACCGGTTATAAC 360 Query 361 TTAACCGGTTACAAATACCGGCTTGTGTCTCCTGTTCTTGGTTTATTGGCTTACAATTCA 420 |||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||| Sbjct 361 TTAACCGGTTACAATTACCTGCTTGTGTCTCCGGTTCTTGGTTTATTGGCTTACAATTCA 420 Query 421 AATCCGGACGGTGTTGCTGTGAATCCTTATGAGGTTAACGTAATGGGCACGGAACAAAAC 480 || ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 421 AACCCGGACGGTGTGGCTGTGAATCCTTATGAGATTAACGTAATGGGCACGGAACAAAAC 480 Query 481 CCTATTTTGATCAAATTCTTAAGCAGTGAGGCAAGTGGTAGCCCTAAACCTAACACGAAG 540 |||||||||||||| ||||| | |||| | | |||||||||||||| |||||| Sbjct 481 CCTATTTTGATCAAGTTCTT--G-AGTG-G-----T---AGCCCTAAACCTAATACGAAG 528 Query 541 AAGAACTCATCTGTCTTGTGTGCTTGCTTCACAAGTAACGGTAACATAACGTTTAGAGAG 600 |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 529 AAGAACTCATCTCTCTTGTGTGCTTGCTTCACAAGTAATGGTAACATAACGTTTAGAGAG 588 Query 601 CAAGTTTCAGCTTATGTTTGCTTGGGAACAAGACAAGGGCATTACGCGCTTGTGATTAGA 660 ||| ||||||| || |||||||||||||||| | |||||||||||||||| ||||||||| Sbjct 589 CAATTTTCAGCCTACGTTTGCTTGGGAACAACAAAAGGGCATTACGCGCTGGTGATTAGA 648 Query 661 GCTCATGATAGTGGCGGTGGCGGTAGTACGGTGGTAACACCGTCGTCATCTCCGGCTTTG 720 ||| |||||||| | ||||| ||||||||||||||||| ||| |||||||||| || || Sbjct 649 GCTGATGATAGTAGTGGTGGTGGTAGTACGGTGGTAACGCCGCCGTCATCTCCTGCGGTG 708 Query 721 ACTGACGGTGGCGGAGGGAAATTGAGCCGGTGGAAAGTGGCGGTTGGGAGTGTGATAGGT 780 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 709 AATGACGGTGGCGGAGGGAAATTGAGCCGGTGGAAAGTGGCGGTTGGGAGTGTGATTGGG 768 Query 781 TCAATAATTGGAGCGTTTCTGTTAGGGTTATTGGTGGTGGCGATGGTAGTgaaagggaag 840 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 769 TCAATGATTGGAGCGTTTCTGTTAGGGTTATTGGTGGTGGCGATGGTAGTGAAAGGGAAG 828 Query 841 aagaaagcgatgagagaggagatggagaggagagcttatgaagaagaagCACTTCAGGTT 900 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct 829 AAGAAAGCGATGAGAGAGGAGCTGGAGAGAAGAGCTTATGAAGAAGAAGCACTTCAGGTT 888 Query 901 TCAATGGTGGGTCATGTTAGAGCTAATCCTAATGCTTCGAGATCAAGAACGATTCCAAGA 960 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 889 TCAATGGTGGGTCATGTTAGAGCTAATCCTAATGCTTCGAGAACAAGAACGGTTCCAAGA 948 Query 961 TTTGAAAATACTAGGTA 977 ||||| ||||||||||| Sbjct 949 TTTGACAATACTAGGTA 965 > Ahg923226 jgi|Araly1|923226|scaffold_104507.1 Length=832 Score = 769 bits (416), Expect = 0.0 Identities = 556/622 (89%), Gaps = 16/622 (3%) Strand=Plus/Plus Query 363 AACCGGTTACAAATACCGGCTTGTGTCTCCTGTTCTTGGTTTATTGGCTTACAATTCAAA 422 ||||||||| || ||| |||| |||||||| ||||||||||||||||||||||||||||| Sbjct 152 AACCGGTTATAATTACGGGCTCGTGTCTCCGGTTCTTGGTTTATTGGCTTACAATTCAAA 211 Query 423 TCCGGACGGTGTTGCTGTGAATCCTTATGAGGTTAACGTAATGGGCACGGAACAAAACCC 482 ||| | ||||| |||||||||||||||||| ||||| |||| ||||||||||||||| | Sbjct 212 CCCGTATGGTGTGGCTGTGAATCCTTATGAGATTAACATAATAGGCACGGAACAAAACTC 271 Query 483 TATTTTGATCAAATTCTTAAGCAGTGAGGCAAGTGGTAGCCCTAAACCTAACACGAAGAA 542 |||||||||||| ||||| || || | ||||||||| ||||||||||||||||||||||| Sbjct 272 TATTTTGATCAAGTTCTTGAGTAGCGTGGCAAGTGGGAGCCCTAAACCTAACACGAAGAA 331 Query 543 GAACTCATCTGTCTTGTGTGCTTGCTTCACAAGTAACGGTAACATAACGTTTAGAGAGCA 602 |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 332 GAACTCATCTCTCTTGTGTGCTTGCTTCACAAGTAACGGTAACATAACGTTTAGGGAGCA 391 Query 603 AGTTTCAGCTTATGTTTGCTTGGGAACAAGACAAGGGCATTACGCGCTTGTGATTAGAGC 662 ||||||||| | |||| |||||||||||||||||||||||| | ||| ||||||||||| Sbjct 392 AGTTTCAGCCTCCGTTTTCTTGGGAACAAGACAAGGGCATTATGTGCTGGTGATTAGAGC 451 Query 663 TCATGATAGTGGCGGTGGCGGTAGTACGGTGGTAACACCGTCGTCATCTCCGGCTTTGAC 722 |||||||||| | ||| | ||||||||| ||||||| ||| ||||||||||||| ||| Sbjct 452 TCATGATAGTAGTGGTCGTGGTAGTACGTTGGTAACGCCGCCGTCATCTCCGGCGGTGAA 511 Query 723 TGACGGTGGCGGAGGGAAATTGAGCCGGTGGAAAGTGGCGGTTGGGAGTGTGATAGGTTC 782 |||||||||||||||||||||| || ||| ||| | |||||||| || || Sbjct 512 TGACGGTGGCGGAGGGAAATTG-GC-GGT------TGG-G------AGTGTGATTGGGTC 556 Query 783 AATAATTGGAGCGTTTCTGTTAGGGTTATTGGTGGTGGCGATGGTAGTgaaagggaagaa 842 ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 557 AATGATTGGAGCGTTTCTGTTACGGTTATTGGTGGTGGCGATGGTAGTGAAAGGGAAGAA 616 Query 843 gaaagcgatgagagaggagatggagaggagagcttatgaagaagaagCACTTCAGGTTTC 902 |||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 617 GAAAACTATGAGAGAGGAGATGGAGAGGAGAGCTTATGAAGAAGAAGCACTTCCGGTTTC 676 Query 903 AATGGTGGGTCATGTTAGAGCTAATCCTAATGCTTCGAGATCAAGAACGATTCCAAGATT 962 |||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||| Sbjct 677 AATGGTGGGTCATGTTAGAGCTAATCCTAATGCTTCAAGAACAAGAACGGTTCCAAGATT 736 Query 963 TGAAAATACTAGGTATAAGTAA 984 ||| ||||||||||| | |||| Sbjct 737 TGACAATACTAGGTACA-GTAA 757 > Ahg950465 jgi|Araly1|950465|scaffold_802352.1 Length=601 Score = 649 bits (351), Expect = 0.0 Identities = 482/543 (89%), Gaps = 18/543 (3%) Strand=Plus/Plus Query 443 ATCCTTATGAGGTTAACGTAATGGGCACGGAACAAAACCCTATTTTGATCAAATTCTT-A 501 ||||||||||| |||| |||||||||| ||||||||| ||||||||||||| ||||| | Sbjct 1 ATCCTTATGAGATTAATATAATGGGCACAGAACAAAACTCTATTTTGATCAAGTTCTTGA 60 Query 502 AGCAGTGAGGCAAGTGGTAGCCCTAAACCTAACACGAAGAAGAACTCATCTGTCTTGTGT 561 | || | ||||||||| ||||||||||||||||| ||||||||||||||| |||||||| Sbjct 61 A-TAGCGTGGCAAGTGGGAGCCCTAAACCTAACACAAAGAAGAACTCATCTCTCTTGTGT 119 Query 562 GCTTGCTTCACAAGTAACGGTAACATAACGTTTAGAGAGCAAGTTTCAGCTTATGTTTGC 621 ||||||||||||||||||||||||||||||||||| |||||||||||||| | |||| | Sbjct 120 GCTTGCTTCACAAGTAACGGTAACATAACGTTTAGGGAGCAAGTTTCAGCCTCCGTTTTC 179 Query 622 TTGGGAACAAGACAAGGGCATTACGCGCTTGTGATTAGAGCTCATGATAGTGGCGGTGGC 681 ||||||||||||||||||||||| | ||| ||||||||||||||||||||| | ||| | Sbjct 180 TTGGGAACAAGACAAGGGCATTATGTGCTGGTGATTAGAGCTCATGATAGTAGTGGTCGT 239 Query 682 GGTAGTACGGTGGTAACACCGTCGTCATCTCCGGCTTTGACTGACGGTGGCGGAGGGAAA 741 ||||||||| ||||||| ||| ||||||||||||| ||| ||||||||||||||||||| Sbjct 240 GGTAGTACGTTGGTAACGCCGCCGTCATCTCCGGCGGTGAATGACGGTGGCGGAGGGAAA 299 Query 742 TTGAGCCGGTGGAAAGTGGCGGTTGGGAGTGTGATAGGTTCAATAATTGGAGCGTTTCTG 801 ||| || ||| ||| | |||||||| || ||||| ||||||||||||||| Sbjct 300 TTG-GC-GGT------TGG-G------AGTGTGATTGGGTCAATGATTGGAGCGTTTCTG 344 Query 802 TTAGGGTTATTGGTGGTGGCGATGGTAGTgaaagggaagaagaaagcgatgagagaggag 861 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 345 TTACGGTTATTGGTGGTGGCGATGGTAGTGAAAGGGAAGAAGAAAACGATGAGAGAGGAG 404 Query 862 atggagaggagagcttatgaagaagaagCACTTCAGGTTTCAATGGTGGGTCATGTTAGA 921 |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 405 ATGGAGAGAAGAGCTTATGAAGAAGAAGCACTTCCGGTTTCAATGGTGGGTCATGTTAGA 464 Query 922 GCTAATCCTAATGCTTCGAGATCAAGAACGATTCCAAGATTTGAAAATACTAGGTATAAG 981 ||||||||||||||||| ||| |||||||| |||||||| |||| ||||||||||| | | Sbjct 465 GCTAATCCTAATGCTTCAAGAACAAGAACGGTTCCAAGACTTGACAATACTAGGTACA-G 523 Query 982 TAA 984 ||| Sbjct 524 TAA 526 > Ahg341528 jgi|Araly1|341528|fgenesh1_pg.C_scaffold_3001291 Length=519 Score = 619 bits (335), Expect = 1e-176 Identities = 458/515 (89%), Gaps = 18/515 (3%) Strand=Plus/Plus Query 463 ATGGGCACGGAACAAAACCCTATTTTGATCAAATTCTTAAGCAGTGAGGCAAGTGGTAGC 522 |||||||||||||||||| ||||||||||||| ||||| || || | ||||||||| ||| Sbjct 1 ATGGGCACGGAACAAAACTCTATTTTGATCAAGTTCTTGAGTAGCGTGGCAAGTGGGAGC 60 Query 523 CCTAAACCTAACACGAAGAAGAACTCATCTGTCTTGTGTGCTTGCTTCACAAGTAACGGT 582 |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct 61 CCTAAACCTAACAC---GAAGAACTCATCTCTCTTGTGTGCTTGCTTCACAAGTAACGGT 117 Query 583 AACATAACGTTTAGAGAGCAAGTTTCAGCTTATGTTTGCTTGGGAACAAGACAAGGGCAT 642 |||||||||||||| |||||||||||||| | |||| |||||||||||||||||||||| Sbjct 118 AACATAACGTTTAGGGAGCAAGTTTCAGCCTCCGTTTTCTTGGGAACAAGACAAGGGCAT 177 Query 643 TACGCGCTTGTGATTAGAGCTCATGATAGTGGCGGTGGCGGTAGTACGGTGGTAACACCG 702 || | ||| ||||||||||||||||||||| | ||| | ||||||||| ||||||| ||| Sbjct 178 TATGTGCTGGTGATTAGAGCTCATGATAGTAGTGGTCGTGGTAGTACGTTGGTAACGCCG 237 Query 703 TCGTCATCTCCGGCTTTGACTGACGGTGGCGGAGGGAAATTGAGCCGGTGGAAAGTGGCG 762 ||||||||||||| ||| ||||||||||||||||| ||| ||| ||| ||| | Sbjct 238 CCGTCATCTCCGGCGGTGAATGACGGTGGCGGAGGGAGATT-AGC-GGT------TGG-G 288 Query 763 GTTGGGAGTGTGATAGGTTCAATAATTGGAGCGTTTCTGTTAGGGTTATTGGTGGTGGCG 822 ||||| || || ||||| |||||||||||||||||| ||||||||||||||||| Sbjct 289 ------AGTGTAATTGGGTCAATGATTGGAGCGTTTCTGTTACGGTTATTGGTGGTGGCG 342 Query 823 ATGGTAGTgaaagggaagaagaaagcgatgagagaggagatggagaggagagcttatgaa 882 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 343 ATGGTAGTGAAAGGGGAGAAGAAAACGATGAGAGAGGAGATGGAGAGGAGAGCTTATGAA 402 Query 883 gaagaagCACTTCAGGTTTCAATGGTGGGTCATGTTAGAGCTAATCCTAATGCTTCGAGA 942 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 403 GAAGAAGCACTTCCGGTTTCAATGGTGGGTCATGTTAGAGCTAATCCTAATGCTTCAAGA 462 Query 943 TCAAGAACGATTCCAAGATTTGAAAATACTAGGTA 977 |||||||| ||||||||||||| ||||||||||| Sbjct 463 ACAAGAACGGTTCCAAGATTTGACAATACTAGGTA 497 > Ahg945829 jgi|Araly1|945829|scaffold_702058.1 Length=1069 Score = 507 bits (274), Expect = 8e-143 Identities = 778/1010 (77%), Gaps = 79/1010 (8%) Strand=Plus/Plus Query 18 TATCTTCATCAT-CCT-TCTT-TT-TCATGTACATAAATCCAAATCTCAGA-CCATTGAA 72 |||| ||||||| | | |||| || |||| | || |||| | ||||| | | ||| || Sbjct 41 TATCATCATCATACTTCTCTTATTATCAT-TCCACCAATCTGAGTCTCA-ATCGATTCAA 98 Query 73 TC-AGCACATTTTCTTGATCTTATGATCAGAGATTACACCATTAGAAACTTCAA-CATAC 130 || | ||||| | |||||||| ||||| ||||||||||||||||||||||| || | | | Sbjct 99 TCTA-CACATCTCCTTGATCTCATGATTAGAGATTACACCATTAGAAACTTTAAGC-T-C 155 Query 131 -ATTTCAAGACAGGTGCTAT--C-CAGAAAGTCCATCTTCCTTCGAATTTCTCCT-CCAT 185 || |||| ||| | || || | |||||| ||||||| ||||| ||||||| || || Sbjct 156 AATCTCAACACA-G-GC-ATCACTCAGAAAATCCATCTCCCTTCTAATTTCT-CTGGTAT 211 Query 186 TGATATCGCCACAGCT-AAGTTTAGATGTGGGAGTTTGAGAAGACACGGTGCAAGAATTG 244 || || | ||| | | ||||| || |||||||||||||||||| | || |||| ||||| Sbjct 212 CGACATTGACAC-GGTCAAGTTAAGGTGTGGGAGTTTGAGAAGATATGGAGCAAAAATTG 270 Query 245 GAGAGTTTCACTTAGGTCCGGGC-TTGACCGTGGAGCCATGTGTTGAGAGAGTGATCCTG 303 ||||||||||| | ||| | ||| || || |||||||||||| |||||||| || || Sbjct 271 GAGAGTTTCACATCGGTTCAGGCGTT-ACGGTGGAGCCATGTCCGGAGAGAGTCATGCTA 329 Query 304 GTGAGACAGAA-CTTGGGGTTT-AACTGGTCTTCTTATATTTACTCAACCGGTTATAACT 361 | ||||| || ||| ||||| || ||||| || | || ||||| || |||||||||| Sbjct 330 ATTAGACAAAACCTT--GGTTTGAATTGGTC--CTCA-ATCTACTCTACTGGTTATAACT 384 Query 362 TAACCGGTTACAAATACCGGCTTGTGTCTCCTGTTCTTGGTTTATTGGCTTACAATTCAA 421 || |||| ||||| ||| ||| ||||| || |||||||||||||||||||| ||| | | Sbjct 385 TATCCGGCTACAATTACAAGCTCGTGTCACCGGTTCTTGGTTTATTGGCTTATAATGCTA 444 Query 422 ATCCGGACGGTGTTGCTGTGAATCCTTATGAGGTTAACGTAATGGGCACGGAACAAAACC 481 | || |||||||| || ||||||||||||||||||||| | || || || ||||||| Sbjct 445 ACCCTGACGGTGTGGCCACGAATCCTTATGAGGTTAACGTTGTAGGTACCGATCAAAACC 504 Query 482 CTATTTTGA-TCAAATTCTTAAGCAGTGAGGC-A--AGT---GGTAGCCCTAAACCTA-- 532 | ||||| | || | ||||| |||| |||| | | | ||||||||| |||| Sbjct 505 CAATTTT-AGTCGATTTCTTGAGCAACAAGGCAACTAATAACACTAGCCCTAACCCTACG 563 Query 533 AC-ACGAAGAAGAACTCATCTGTCTTGTGTGCTTGCTTCACAAGTAACGGTAACATAACG 591 || |||||||||||||| || ||||||||||| || || |||||||||| ||||| |||| Sbjct 564 ACGACGAAGAAGAACTCGTCAGTCTTGTGTGCGTGTTTTACAAGTAACGCTAACACAACG 623 Query 592 TTTAGAGAGCAAGTTTCAG-CTTATGTTTGCT--TGGGAACAAGACAAGGGCATTACGCG 648 ||||| |||||||| || | | ||||| || | ||| |||||||||||||||||||| Sbjct 624 TTTAGTGAGCAAGTCTC-GCCGTATGTATG-TAAAGGG-ACAAGACAAGGGCATTACGCT 680 Query 649 CT--TG-TG-A-TTAG-AGCTCATGATAG-TG-GCGGTGGCGGTAGTACGGTGGTAACA- 699 || || || | || |||||| | || || | || |||| || |||||| | Sbjct 681 CTCGTGATGAAGACAGAAGCTCA-AAAAGATGATC-ATGACGGTGGT--GGTGGT-GGAG 735 Query 700 CCGT--CGTCATCTCCGGCTTTGACTGACGGTGGCGGA-G-GGAAA-TTGAGCCGGTGGA 754 || ||||||| ||| ||| || || |||| | ||||| ||||||||||||| Sbjct 736 TGGTGACGTCATCGACGGAGATGAATGGTGGCAACGGAGGAGGAAAGTTGAGCCGGTGGA 795 Query 755 AAGTGGCGGTTGGGAGTGTGATAGGTTCAATAATTGGAGCGTTTCTGTTAGGG-TTATTG 813 |||||||||| ||||||||||| || ||| |||||||| ||||| | ||| | || Sbjct 796 AAGTGGCGGTGGGGAGTGTGATTGGGTCAGGGATTGGAGCAATTCTGCT-GGGAATGTTA 854 Query 814 GTGGTGGCGATGGTAGTgaaagg-gaagaagaaagcgatgagagaggagatggagaggag 872 |||||||||||| | ||| |||| |||||||||||| |||||||| || || ||||| || Sbjct 855 GTGGTGGCGATGCTGGTG-AAGGTGAAGAAGAAAGCAATGAGAGAAGAAATAGAGAGAAG 913 Query 873 agcttatgaagaagaagCACTTCAGGTTTCAATGGTGGGTCATGTTAGAGCTAATCCTAA 932 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 914 AGCTTATGAAGAAGAAGCTCTTCAGGTTTCAATGGTGGGTCATGTTAGAGCT---CCTAC 970 Query 933 TGCTTC-GAGATCAAGAACGATTCCAAGATTTGAAAAT-ACTAGGTATAA 980 |||| | | || | ||||| |||| ||| ||| || | ||||||||| Sbjct 971 TGCTCCTG-GAACTAGAACTCTTCCTAGAATTGCCGATGA-TAGGTATAA 1018 > Ahg334065 jgi|Araly1|334065|fgenesh1_pg.C_scaffold_1000630 Length=540 Score = 494 bits (267), Expect = 6e-139 Identities = 337/371 (91%), Gaps = 3/371 (1%) Strand=Plus/Plus Query 615 TGTTTGCTTGGGAACAAGACAAGGGCATTACGCGCTTGTGATTAGAGCTCATGATAGTGG 674 ||| ||||||||||||||||||||||| || | ||| ||||||||||||||||||||| | Sbjct 117 TGTCTGCTTGGGAACAAGACAAGGGCACTATGTGCTGGTGATTAGAGCTCATGATAGTAG 176 Query 675 CGGTGGCGGTAGTACGGTGGTAACACCGTCGTCATCTCCGGCTTTGACTGACGGTGGCGG 734 ||| | ||||||||| ||||||| || ||||||||||||| ||| ||||||||||| Sbjct 177 TGGTCGTGGTAGTACGTTGGTAACGCCACCGTCATCTCCGGCGGTGAAGGACGGTGGCGG 236 Query 735 AGGGAAATTGAGCCGGTGGAAAGTGGCGGTTGGGAGTGTGATAGGTTCAATAATTGGAGC 794 ||||||||| |||||||||||| |||||||||| | |||||| || ||||| |||||||| Sbjct 237 AGGGAAATTAAGCCGGTGGAAATTGGCGGTTGGAAATGTGATTGGGTCAATGATTGGAGC 296 Query 795 GTTTCTGTTAGGGTTATTGGTGGTGGCGATGGTAGTgaaagggaagaagaaagcgatgag 854 |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 297 GTTTCTGTTACGGTTATTGGTGGTGGGGATGGTAGTGAAAGGGAAGAAGAAAGCGATGAG 356 Query 855 agaggagatggagaggagagcttatgaagaagaagCACTT-CAGGTTTCAATGGTGGGTC 913 |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct 357 AGAGGAGATGGAGAGGAGAGCTTATGAAGAAGAAGCACTTTC-GGTTTCAATGGTGGGTC 415 Query 914 ATGTTAGAGCTAATCCTAATGCTTCGAGATCAAGAACGATTCCAAGATTTGAAAATACTA 973 ||||||||||||||||||||||||| ||| |||||||| ||||||||||||| ||||||| Sbjct 416 ATGTTAGAGCTAATCCTAATGCTTCAAGAACAAGAACGGTTCCAAGATTTGACAATACTA 475 Query 974 GGTATAAGTAA 984 |||| | |||| Sbjct 476 GGTACA-GTAA 485 Score = 152 bits (82), Expect = 4e-36 Identities = 102/112 (91%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 463 ATGGGCACGGAACAAAACCCTATTTTGATCAAATTCTTAAGCAGTGAGGCAAGTGGTAGC 522 ||||||||| |||||||| |||||||||||| |||||||| || | ||| ||||| ||| Sbjct 1 ATGGGCACGAAACAAAACTTTATTTTGATCAAGTTCTTAAGTAGCGTGGCTAGTGGGAGC 60 Query 523 CCTAAACCTAACACGAAGAAGAACTCATCTGTCTTGTGTGCTTGCTTCACAA 574 |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 61 CCTAAACCTAACACGAAGAAGAACTCATCTCTCTTGTGTGCTTGCTTCACAA 112 > Ahg915980 jgi|Araly1|915980|Al_scaffold_0008_731 Length=462 Score = 259 bits (140), Expect = 3e-68 Identities = 162/173 (94%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 439 GTGAATCCTTATGAGGTTAACGTAATGGGCACGGAACAAAACCCTATTTTGATCAAATTC 498 ||||||||||||||| || |||||||||||||||||||||||||| |||||||||| ||| Sbjct 10 GTGAATCCTTATGAGATTGACGTAATGGGCACGGAACAAAACCCTGTTTTGATCAAGTTC 69 Query 499 TTAAGCAGTGAGGCAAGTGGTAGCCCTAAACCTAACACGAAGAAGAACTCATCTGTCTTG 558 || || || ||||||||||| || |||||||||||||||||||||||||||||| ||||| Sbjct 70 TTGAGTAGCGAGGCAAGTGGGAGTCCTAAACCTAACACGAAGAAGAACTCATCTCTCTTG 129 Query 559 TGTGCTTGCTTCACAAGTAACGGTAACATAACGTTTAGAGAGCAAGTTTCAGC 611 |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 130 TGTGCTTGCTTCACAAGTAACGGTAACATAACGTTTAGGGAGCAAGTTTCAGC 182 Score = 128 bits (69), Expect = 7e-29 Identities = 103/119 (87%), Gaps = 4/119 (3%) Strand=Plus/Plus Query 660 AGCTCATGATAGTGGCGGTGGCGGTAGTACG-GTGGTAACACCGTCGTCATCTCCGGCT- 717 ||||||||||||| | ||| | | ||||| | |||||||| ||| |||||||| | ||| Sbjct 183 AGCTCATGATAGTAGTGGTCGTGATAGTA-GAGTGGTAACGCCGCCGTCATCT-CTGCTG 240 Query 718 TTGACTGACGGTGGCGGAGGGAAATTGAGCCGGTGGAAAGTGGCGGTTGGGAGTGTGAT 776 ||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct 241 GTGAATGACGGTGGCGGAGGGAAATTAAGCTGGTGGAAAGTGGCGGTTGGGAGTGTGAT 299 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 36559877403 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5