BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G13210.2
Length=1650
Score E
Sequences producing significant alignments: (Bits) Value
Ahg333008 jgi|Araly1|333008|fgenesh1_pm.C_scaffold_9000036 1908 0.0
Ahg930576 jgi|Araly1|930576|scaffold_303033.1 1074 0.0
Ahg930453 jgi|Araly1|930453|scaffold_302910.1 300 3e-80
Ahg484177 jgi|Araly1|484177|fgenesh2_kg.5__169__AT2G02720.1 93.5 5e-18
> Ahg333008 jgi|Araly1|333008|fgenesh1_pm.C_scaffold_9000036
Length=1257
Score = 1908 bits (1033), Expect = 0.0
Identities = 1132/1181 (96%), Gaps = 2/1181 (0%)
Strand=Plus/Plus
Query 230 TTTATCAGACGGTGAATGGCATGAACACGCCGTTAAAGACCCAGAAGAAATAGCAGCAAT 289
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 78 TTTATCAGACGGTGAATGGCATGAACACGCCGTTAAAGACCCAGAAGAAATAGCAGCACT 137
Query 290 GGTCGATATGAGCATACGTAACAGTACGTATCGTAGAAAGCTAGGGTTCTTCTCCTCATG 349
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 138 GGTCGATATGAGTATACGTAACAGTACGTATCGTAGAAAGCTAGGGTTCTTCTCCTCTTG 197
Query 350 CTCAACAGGAAACCCAATAGATGATTGTTGGCGATGCGATAAAAAATGGCATCGCCGAAG 409
| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 198 CGAAACTGGAAACCCAATCGATGATTGTTGGCGATGCGATAAAAAATGGCATCGCCGGAG 257
Query 410 AAAGCGATTAGCGGATTGCGCGATCGGTTTCGGACGTAACGCAGTCGGAGGCCGTGATGG 469
||| |||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 258 AAAACGATTAGCGGGTTGCGCGATTGGTTTCGGACGTAACGCAGTTGGAGGCCGTGATGG 317
Query 470 ACGTTACTACATTGTTACTGATCCATCTGATCATGATCCGGTT-ACACCAAAACCCGGTA 528
|||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||
Sbjct 318 ACGTTACTACATTGTTACTGATCCATCTGATCATGACCCGGTTAAC-CCAAAACCCGGTA 376
Query 529 CACTCCGGTACGCTGTTATACAAGACGAACCGCTATGGATCGTCTTTAAACGTGACATGG 588
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 377 CACTCCGGTACGCTGTGATACAAGACGAACCGCTATGGATCGTATTTAAACGTGACATGG 436
Query 589 TCATTACTTTAAGCCAAGAACTAATCATGAATAGCTTCAAAACTATCGATGGTCGTGGTG 648
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct 437 TCATTACTTTAAGCCAAGAACTAATCATGAATAGCTTCAAAACGATTGATGGTCGTGGCG 496
Query 649 TCAACGTGCATATAGCTGGTGGTGCATGTCTCACGGTTCAGTACGTTACGAATATTATCA 708
| ||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 497 TGAACGTACATATAGCTGGTGGTGCATGTATCACGATTCAGTACGTTACGAATATTATCA 556
Query 709 TCCATGGGATAAATATTCATGATTGTAAGCGAACTGGTAACGCTATGGTTAGGAGTTCGG 768
|||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct 557 TCCATGGGATTAATATTCACGATTGTAAGCGAACTGGTAACGCTATGGTTCGGAGTTCGG 616
Query 769 AGAGTCATTATGGTTGGAGAACGATGGCGGATGGTGATGGTATTTCGATTTTTGGATCTA 828
|||||||||||||||||||||| ||||| ||||||||||| || |||||||||||||| |
Sbjct 617 AGAGTCATTATGGTTGGAGAACTATGGCTGATGGTGATGGGATATCGATTTTTGGATCGA 676
Query 829 GTCATATTTGGATTGATCATAATTCTCTTTCGAGTTGTGCTGATGGATTGATAGACGCAA 888
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct 677 GTCATATTTGGATTGATCATAATTCTCTTTCGAATTGTGCTGATGGATTGATAGATGCAA 736
Query 889 TTATGGGATCTACTGCTATTACCATCTCTAATAATTATCTCACTCACCACAACGAGGCTA 948
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 737 TTATGGGATCTACTGCTATTACCATCTCTAATAATTATCTCACTCACCACAATGAGGCTA 796
Query 949 TTTTGTTGGGGCATACCGATTCATACACCAGAGACAAAATGATGCAAGTAACCATTGCAT 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 797 TTTTGTTGGGGCATACCGATTCATACACCAGAGACAAAATGATGCAAGTAACCATTGCAT 856
Query 1009 ACAACCATTTTGGAGAAGGTCTTATACAGAGAATGCCAAGGTGCAGGCATGGATACTTTC 1068
|||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |
Sbjct 857 ACAACCATTTTGGAGAGGGTCTTGTACAGAGAATGCCAAGGTGCAGGCATGGATACTTCC 916
Query 1069 ACGTAGTAAACAATGATTACACTCACTGGGAAATGTATGCAATTGGTGGAAGTGCTAACC 1128
| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct 917 ATGTAGTAAACAACGATTACACTCACTGGGTAATGTATGCAATTGGTGGAAGTGCTAATC 976
Query 1129 CTACCATCAATAGTCAAGGAAACCGGTTCCTTGCCCCGGGAAACCGTTTCGCCAAGGAGG 1188
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 977 CTACCATCAATAGTCAAGGAAACCGGTTCCTTGCCCCGGGAAACCGTTTCGCTAAGGAGG 1036
Query 1189 TGACGAAACGGGTAGGTGCAGGGAAAGGAGAATGGAACAATTGGAATTGGAGATCCCAAG 1248
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct 1037 TGACGAAACGGGTAGGTGCAGGGGAAGGAGAATGGAACAATTGGAACTGGAGATCCCAAG 1096
Query 1249 GAGACTTAATGCTAAATGGTGCCTACTTTACTTCATCTGGAGCTGGAGCTTCTGCAAATT 1308
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1097 GAGACTTAATGCTCAATGGTGCCTACTTTACTTCATCTGGAGCTGGAGCTTCTGCAAATT 1156
Query 1309 ACGCCAGAGCCTCTAGTTTGGCTGCTAAATCATCTTCCCTTGTAGGTATGCTTACCTCTA 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1157 ACGCCAGAGCCTCTAGTTTGGCTGCTAAATCATCTTCCCTTGTAGGTATGCTTACCTCTA 1216
Query 1369 GCTCGGGTGCTTTGAAATGCAGGATCGGTACACTTTGTTAA 1409
|||| |||||||| ||||||||||||||||| |||||||||
Sbjct 1217 GCTCAGGTGCTTTCAAATGCAGGATCGGTACGCTTTGTTAA 1257
Score = 117 bits (63), Expect = 3e-25
Identities = 71/75 (95%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 93 ATGGTGGTCGCTAGAACATTGTTCTCAATCTCAGCAACTCTAATCATTTTTCTAGCACTC 152
|||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1 ATGGTGGTCGCTAGCACATTGTTCTCAATCTCAGCAACTCTAATCATAATTCTAGCACTC 60
Query 153 TTTCTCCATGTAAAT 167
||| |||||||||||
Sbjct 61 TTTTTCCATGTAAAT 75
> Ahg930576 jgi|Araly1|930576|scaffold_303033.1
Length=1369
Score = 1074 bits (581), Expect = 0.0
Identities = 1000/1200 (83%), Gaps = 37/1200 (3%)
Strand=Plus/Plus
Query 237 GACGGTGAATGGCATGAACACGCCGTTAAAGACCCAGAAGAAATAGCAGCAATGGTCGAT 296
||||||| |||| ||||||||||||||||| ||||||||||| |||| ||||||||||||
Sbjct 180 GACGGTGCATGGAATGAACACGCCGTTAAAAACCCAGAAGAAGTAGCTGCAATGGTCGAT 239
Query 297 ATGAGC-A-TACGTAACAGTACGTATCGTAGAAAGCTAGGGTTCTTCTCCTCATGCTCAA 354
|||| | | || | ||||||||| | || || | | |||| ||| | | ||||||| | |
Sbjct 240 ATGA-CGATTAAG-AACAGTACGGAGCGGAGGAGGTTAGGATTC-T-T-CTCATGCGCCA 294
Query 355 CAGGAAACCCAATAGATGATTGTTGGCGATGCGATAAAAAATGGCATCGCCGAAGAAAGC 414
| ||||||||||| || || |||||| |||| ||| || ||||||| |||| ||||||
Sbjct 295 CCGGAAACCCAATCGACGACTGTTGGAGATGTGATCGGAACTGGCATCTCCGACGAAAGC 354
Query 415 GAT-TAGCGGATTGCGCGATCGGTTTCGGACGTAACGCAGTCGGAGGCCGTGATGGACGT 473
| | | ||| ||||||| ||||| ||||| ||||||||||||||||| || ||||| |||
Sbjct 355 G-TCTCGCGAATTGCGCAATCGGATTCGGTCGTAACGCAGTCGGAGGACGAGATGGTCGT 413
Query 474 TACTACATTGTTACTGATCCATCTGATCATGATC-CGGTTACA-CCAAAACCCGGTACAC 531
|||||| | || || |||||||| || || || | |||||| | ||| ||| || || |
Sbjct 414 TACTACGTCGTCACAGATCCATCAGACCACGA-CGCGGTTA-ATCCACGACCGGGAACGC 471
Query 532 TCCGGT-ACGCTGTTATACAAGA-CGAACCGCTATGGATCGTCTTTAAACGTGACATGGT 589
||| || |||| || || ||||| || ||| ||||||||||||| ||||| ||||||||
Sbjct 472 TCC-GTCACGCCGTGATTCAAGACCG-TCCGTTATGGATCGTCTTCAAACGCGACATGGT 529
Query 590 CATTACTTTAAGC-CAAGAACTAATCATGAATAGCTTCAAAACTATCGATGGTCGTGGTG 648
|||||| ||| | ||||| ||||||||||||||||||||||| |||||||| | || |
Sbjct 530 GATTACTCTAA-CTCAAGAGCTAATCATGAATAGCTTCAAAACGATCGATGGAAGAGGCG 588
Query 649 TCAACG-TGCATATAGCTGGTGGTGCATGTCTCACGGTTCAGTACGTTACGAATATTATC 707
| |||| |||| || || || ||||| ||| ||||| | |||| || ||||||||||||
Sbjct 589 TGAACGTTGCA-ATCGCAGGCGGTGCTTGTATCACGATCCAGTTTGTGACGAATATTATC 647
Query 708 ATCCATGGGATAAATATTCATGATTGTAAG-CGAACTGGTAACGCTATGGTTAGGAGTTC 766
||||||||||| ||||| ||||||||| || | |||||||| ||||||||| | || ||
Sbjct 648 ATCCATGGGATTAATATACATGATTGT-AGAAGGACTGGTAATGCTATGGTTCGAAGCTC 706
Query 767 GGAG-AGTCATTATGGTTGGAGAACGATGGCGGATGGTGATGGTATTTCGATTTTTGGAT 825
| | | |||||||| ||||| || |||||||||||||||| ||| |||||||||||||
Sbjct 707 GCCGTCG-CATTATGGGTGGAGGACTATGGCGGATGGTGATGCTATATCGATTTTTGGAT 765
Query 826 CTAGTCATATTTGGATTGATCATAATTCTCTT-TCGAGTTGTGCTGATGGATTGATAGAC 884
| ||||||||||||||||||||||||||| || || | |||||||||||||||||| ||
Sbjct 766 CGAGTCATATTTGGATTGATCATAATTCT-TTGTCTAATTGTGCTGATGGATTGATTGAT 824
Query 885 GCAATTATGGGATCTACTGCTATTACCATCTCTAATAATTATCTCACTCACCACAACGAG 944
|| ||||||||||||||||||||||| ||||| ||||| ||| | |||||||||||||||
Sbjct 825 GCGATTATGGGATCTACTGCTATTACTATCTCCAATAACTATATGACTCACCACAACGAG 884
Query 945 GCTATTTTGTTGGGGCATACCGATTCATACACCAGAGACAAAATGATGCAAGTAACCATT 1004
| ||| ||| ||||||||| ||||||||||| |||||||| |||||||||| || ||
Sbjct 885 GTTATGTTGATGGGGCATAGTGATTCATACACTAGAGACAAGTTGATGCAAGTGACAATA 944
Query 1005 GCATACAACCATTTTGGAGAAGGTCTTATACAGAGAATGCCAAGGTGCAGGCATGGATAC 1064
||||| ||||||||||| ||||| ||||||||||||||||| ||||| || ||||| ||
Sbjct 945 GCATATAACCATTTTGGGGAAGGGCTTATACAGAGAATGCCGAGGTGTAGACATGGTTA- 1003
Query 1065 TTT-CACGTAGTAAACAATGATTACACTCACTGGGAAATGTATGCAATTGGTGGAAGTGC 1123
||| || || |||||||||||||| ||||| |||| ||||||||||||||||||||||||
Sbjct 1004 TTTCCATGTTGTAAACAATGATTATACTCATTGGGTAATGTATGCAATTGGTGGAAGTGC 1063
Query 1124 TAACCCTACCATCAATAGTCAAGGAAACCGGTTCCTTGCCCCGGGAAACCGTTTCGCCAA 1183
|||||||||||||||||| ||||| || |||||||||||||||||||||| ||| |||||
Sbjct 1064 TAACCCTACCATCAATAGCCAAGGCAATCGGTTCCTTGCCCCGGGAAACCCTTTTGCCAA 1123
Query 1184 GGAGGTGACGAA-ACGGGTAGGTGCAGGGAAAGGAGAATGGAA-CAATTGGAATTGGAGA 1241
|||||||| || | |||||||| || || ||||||||||||| |||| |||| ||||||
Sbjct 1124 AGAGGTGACAAAGA-GGGTAGGTTCATGGCAAGGAGAATGGAAGCAAT-GGAACTGGAGA 1181
Query 1242 TCCCAAGGAGACTTAATGCTAAATGGTGCCTACTTTACTTCATCTGGAGCTGGAGCTTCT 1301
|| || |||||| ||||||| || ||||||||||| ||| ||||||||||| ||| ||
Sbjct 1182 TCACAGGGAGACCTAATGCTCAACGGTGCCTACTTCACTAAATCTGGAGCTGCTGCTCCT 1241
Query 1302 GCAAATTACGCCAGAGCCTCTAGTTTGGCTGCTAAATCATCTTCCCTTGTAGGTATGCTT 1361
|||| || ||||||||||||||||||| |||||| || ||||| ||||| ||||||||
Sbjct 1242 GCAAGCTATGCCAGAGCCTCTAGTTTGGGAGCTAAACCAGCTTCCGTTGTAAGTATGCTT 1301
Query 1362 ACCT-CTAGCTCGGGTGCT-TTGAAATGCAGGATCGGTACACTTTGTTAATTATTTGTAT 1419
|||| | ||||| ||||| || | |||||||||||||| | ||||| ||| ||||||
Sbjct 1302 ACCTAC-AGCTCTGGTGCCCTT-AGATGCAGGATCGGTATGCGGTGTTAGTTAATTGTAT 1359
> Ahg930453 jgi|Araly1|930453|scaffold_302910.1
Length=1395
Score = 300 bits (162), Expect = 3e-80
Identities = 595/800 (74%), Gaps = 46/800 (6%)
Strand=Plus/Plus
Query 420 GCGGATTGCGCGATCGGTTTCGGACGTAACGC-AGTCGGAGGCCGTGATGGACGTTACTA 478
|||||||| | ||| ||||| ||| |||| || | | || || ||| ||||| |||||||
Sbjct 383 GCGGATTGTGGGATGGGTTTTGGAAGTAAAGCTAAT-GGTGGTCGTAATGGAAGTTACTA 441
Query 479 CATTGTTACTGATCC-ATCTGATCATGATCCGGT-TACA-CCAAAACCCGGTACACTCCG 535
| || ||||| || | |||| | || || | || | ||||| || || || | ||
Sbjct 442 TGTGGTCACTGACCCGA-GTGATGAGGA--CGTTGTAAATCCAAAGCCAGGAACTTTACG 498
Query 536 GTACGCTGTTATACAAGACGAACCGCTATGGATCGTCTTTAAACGTGACATGGTCAT-TA 594
|||| || || || | || || |||||||| |||||||| | |||||||| || |
Sbjct 499 CCACGCCGTGATCCAGGTTGAGCCATTATGGATCATCTTTAAAAGAGACATGGTGATAAA 558
Query 595 CTTTAAGCCAAGAACTAATCATGAATAGCTTCAAAACTATCGATGGTCGTGGTGTC-AAC 653
|| || |||||||| |||||||| || ||||| || || |||| |||||||| | |||
Sbjct 559 GTTGAA-ACAAGAACTGATCATGAACAGTTTCAAGACCATTGATGCTCGTGGTG-CTAAC 616
Query 654 GTGCATATAGCTGGTGGTGCATGTC-TCACGGTTCAGTACGTTACGAATATTATCATCCA 712
|| ||||| || |||||| || | | || | |||| | || ||| ||||||| ||
Sbjct 617 GTCCATATTGCCAATGGTGCTTG-CATAACAATCCAGTTTATAACCAATGTTATCATTCA 675
Query 713 TGGGATAAATATTCATGATTGTAAGCGAACTGGTAACGCT-A-TGGTTAGGAGTTC-GGA 769
||| | | ||||| ||||| ||| |||| || || | | | | || || || || |
Sbjct 676 TGGCTTGCACATTCACGATTGCAAGAGAACGGGGAATG-TAACT-GTCAGAAGCTCACCA 733
Query 770 GAGTCATTA--TGG-TT-GGAGAACGATGGCGGATGGTGATGGTATTTCGATTTTTGGAT 825
||||| | || || || |||| ||| |||||||||| |||| || ||||| |
Sbjct 734 -AGTCA-CACCGGGTTTAGGGGAAC---GGCTGATGGTGATGCTATTAATATATTTGGGT 788
Query 826 CTAGTCATATTTGGATTGATCATAA-T-TCTCTTTCGAGTTGTGCTGATGG-ATTGATAG 882
| |||||||||||||| || || || | ||||| || | ||| ||||||| ||| | |
Sbjct 789 CAAGTCATATTTGGATCGACCACAACTCTCTCTCTC-A-CTGTACTGATGGTCTTG-TTG 845
Query 883 ACGCAATTATGGGATCTACTGCTATTACCATCTCTAATAATTATCTCACTCACCACAACG 942
| | | ||||| |||||||| |||||||| || ||||| || ||||||||||| | |
Sbjct 846 ATGTTGTCATGGGTTCTACTGCCATTACCATTTCCAATAACCATTTCACTCACCACGATG 905
Query 943 AGGCT-ATTTTGTTGGGGCATACCGATTCATACAC-CAGAGACAAAATGATGCAAGTAAC 1000
||| | || ||| | ||||| | || || ||||| || |||||| |||||||||| |
Sbjct 906 AGG-TGATGTTGCTAGGGCACAAAGACTCGTACACACA-AGACAAGCTGATGCAAGTGA- 962
Query 1001 CA-TTGCATACAACCATTTTGGAGAAGGTCTTATACAGAGAATGCCAAGGTGCAGGCATG 1059
|| |||| ||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 963 CAGTTGCGTACAACCATTTTGGAGAGGGGCTTATACAGAGAATGCCAAGGTGCAGGCATG 1022
Query 1060 GATACTTTC-ACGTAGTAAACAATGATTACACTCACTGGGAAATGTATGCAATTGGTGGA 1118
| || |||| | || || ||||| |||||||| |||||| |||||||||| |||| |||
Sbjct 1023 GTTA-TTTCCATGTGGTTAACAACGATTACACACACTGGAAAATGTATGCTGTTGGAGGA 1081
Query 1119 AGTGCTAACCCTACCATCAATAGTCAAGGAAACCGGT-TCCTTGC-CCCGGGAAACCGTT 1176
||||| ||||| || || || |||||||| || | | | || || ||| || ||| |
Sbjct 1082 AGTGCAAACCCAACTATAAACAGTCAAGGCAATAGATATGCT-GCTCCCAATAA-CCGCT 1139
Query 1177 TCGCCAAGGAGGTGACGAAA 1196
||||||||||||||| |||
Sbjct 1140 CCGCCAAGGAGGTGACAAAA 1159
> Ahg484177 jgi|Araly1|484177|fgenesh2_kg.5__169__AT2G02720.1
Length=1718
Score = 93.5 bits (50), Expect = 5e-18
Identities = 283/388 (73%), Gaps = 46/388 (12%)
Strand=Plus/Plus
Query 798 GATGGTGATGGTATTTCGATTTTTGGATCTA-GTCATATTTGGATTGATCATAATTCTC- 855
||||||||||| ||| ||||||||| | | | || ||||||| |||||| ||||
Sbjct 898 GATGGTGATGGGATTAATATTTTTGGAGCAACG-AATGTTTGGATCGATCAT--GTCTCA 954
Query 856 -TTTC-GAGTTGTGCTGAT-GGATTGATAGACGCAATTATGGGATCTACTGCTATTACCA 912
| | || |||| ||||| ||| |||| || || || |||||||| || || ||||| |
Sbjct 955 ATGACGGA-TTGTTCTGATGGGA-TGATTGATGCGATCATGGGATCGACCGCGATTACTA 1012
Query 913 TCTCTAA-T-A-ATTATCTCACTC-ACCACAACGAGGCT-ATTTTG-TTGGGGCATACCG 966
|||| || | | ||| | | || | ||||| |||||| | || || |||||| || |
Sbjct 1013 TCTCCAATTCACATT-T-T-AC-CGACCACGACGAGG-TGATGCTGTTTGGGG-GTA-C- 1064
Query 967 ATTCATA-CACCAGA--GACAA-AATGATGCAAG-TAACCATTGCATACAACCATTTTGG 1021
| || | | || ||||| || |||| || |||| |||| | |||||||||||
Sbjct 1065 AAACA-AGGATGTGATCGACAAGAA-AATGC-AGATAACGGTTGCGTTTAACCATTTTGG 1121
Query 1022 AGAAG-GTCTT-ATA-CAGAGAATGCCAA-GGTGCAGGCATGGATACTTTCACGTAGTAA 1077
||| | || | | || |||||||||| ||| ||| |||| | | || || || |
Sbjct 1122 -TAAGAG-ATTGA-AGCAAAGAATGCCAAGGGT-CAGATATGGTTTGGTCCATGTTGTGA 1177
Query 1078 ACAATGATTACACTCACTGGGAAATGTATGCAATTGGTGGAAG--TGCTAACCCTACCAT 1135
||||||| |||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 1178 ACAATGACTACACTCACTGGGAAATGTATGCAATTGGTGGAAACATG--AACCCTACCAT 1235
Query 1136 CAATA-GTCAAGGAAACCGGTTCCTTGC 1162
| || | ||||| || || ||| ||||
Sbjct 1236 TA-TAAGCCAAGGCAATCGTTTCATTGC 1262
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 61858557880
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5