BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G13420.1
Length=2623
Score E
Sequences producing significant alignments: (Bits) Value
Ahg915045 jgi|Araly1|915045|Al_scaffold_0009_14 3618 0.0
Ahg915047 jgi|Araly1|915047|Al_scaffold_0009_16 3280 0.0
Ahg358974 jgi|Araly1|358974|fgenesh1_pg.C_scaffold_9000014 2673 0.0
Ahg947748 jgi|Araly1|947748|scaffold_703977.1 237 3e-61
> Ahg915045 jgi|Araly1|915045|Al_scaffold_0009_14
Length=2358
Score = 3618 bits (1959), Expect = 0.0
Identities = 2228/2361 (94%), Gaps = 6/2361 (0%)
Strand=Plus/Plus
Query 78 ATGGATGGTGAGGAACATCAAATAGATGGTGATGAAGTTAATAACCATGAGAACAAGTTG 137
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGATGGTGAGGAACAGCAAATAGATGGTGATGAAGTTAATAACCATGAGAACAAGTTG 60
Query 138 AATGaaaaaaaGAAATCATGGGGAAAACTATATCGACCCGACTCTTTCATCATAGAGGCC 197
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 61 AATGAAAAAAAGAAATCATGGGGAAAACTATATCGACCCGACTCTTTCAGCATAGAGGCC 120
Query 198 GGACAAACTCCAACAAATACCGGGCGTCGCTCATTGATGAGCTGGAGAACAACGATGAGT 257
|||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||
Sbjct 121 GGACAAACTCCAACAAATACCGGGCGTCCCTCATTGATGAGCTGGACAACGACGATGAGT 180
Query 258 TTGGCATTTCAGAGCCTAGGAGTGGTGTATGGAGATATCGGGACATCGCCATTATATGTG 317
||||||||||||||||||||||||||||||||||| ||||||||||| || || ||||||
Sbjct 181 TTGGCATTTCAGAGCCTAGGAGTGGTGTATGGAGACATCGGGACATCACCGTTGTATGTG 240
Query 318 TATGCAAGTACTTTCACTGATGGCATCAATGACAAAGATGATGTCGTTGGTGTTCTCTCG 377
|||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||
Sbjct 241 TATGCAAGTACTTTCACTGAAGGCATCAATGACAAAAATGATGTCATTGGTGTTCTCTCG 300
Query 378 CTCATAATCTACACTATTACTCTCGTAGCGCTCCTCAAATACGTTTTCATTGTTCTTCAG 437
||||| |||||||| ||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 301 CTCATCATCTACACGATTACTCTCGTCGCACTCCTCAAATACGTTTTCATTGTTCTTCAG 360
Query 438 GCTAACGATAACGGTGAAGGAGGAACATTTGCATTGTACTCACTGATATGTCGGTATGCG 497
||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 361 GCTAACGATAATGGTGAAGGAGGAACATTTGCTTTGTACTCGCTGATATGTCGGTATGCG 420
Query 498 AAAATGGGACTAATTCCAAACCAAGAACCAGAAGATGTAGAACTCTCCAACTATACACTT 557
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct 421 AAAATGGGACTAATTCCAAACCAAGAACCAGAAGATACAGAACTCTCCAACTATACTCTT 480
Query 558 GAACTTCCAACCACACAGCTCAGAAGAGCCCATATGATCAAAGAGAAGCTCGAGAACTCT 617
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 481 GAACTTCCAACCACACAGCTCAAAAGAGCCCATATGATCAAAGAGAAGCTCGAGAGTTCT 540
Query 618 AAATTCGCTAAGATCATTCTCTTCCTAGTCACTATTATGGGAACTTCCATGGTCATTGGT 677
|||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||
Sbjct 541 AAATTCGCTAAGATTATACTCTTCCTCGTCACTATTATGGGAACTTCCATGGTCATTGGT 600
Query 678 GATGGAATCCTTACTCCTTCCATCTCAGTACTTTCAGCAGTAAGTGGAATCAAATCTCTC 737
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 601 GATGGCATCCTTACTCCTTCCATTTCAGTACTTTCAGCAGTAAGTGGAATCAAATCTCTC 660
Query 738 GGCCAAAACACGGTGGTGGGTGTTTCGGTTGCAATCTTGATTGTTCTATTCGCATTTCAG 797
|||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 GGCCAAGACACAGTTGTGGGTGTTTCGGTTGCAATCTTGATTGTTCTATTCGCATTTCAG 720
Query 798 CGGTTTGGCACCGATAAAGTTGGATTCTCATTCGCCCCGATCATCCTCGTATGGTTCACA 857
| ||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 721 CAGTTCGGAACCGATAAAGTCGGATTCTCATTCGCTCCGATCATCCTCGTATGGTTCACA 780
Query 858 TTTCTGATCGGAATTGGTCTCTTTAATCTGTTCAAGCATGACATTACCGTCTTAAAGGCA 917
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 781 TTTCTGATCGGAATCGGTCTTTTTAATCTGTTCAAGCATGACATTACCGTCTTAAAGGCA 840
Query 918 CTTAATCCACTCTATATCATTTACTACTTTAGAAGAACTGGTAGACAGGGTTGGATTTCC 977
|||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct 841 CTTAATCCACTCTATATCATTTACTACTTTAGAAGAACTGGTCGAAAAGGTTGGATTTCC 900
Query 978 CTCGGAGGTGTTTTCCTCTGCATCACTGGGACGGAGGCAATGTTTGCTGATCTAGGTCAC 1037
||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||
Sbjct 901 CTCGGAGGTGTTTTCCTTTGCATCACTGGAACGGAGGCCATGTTTGCTGATCTAGGTCAT 960
Query 1038 TTCAGTGTTCGAGCTGTACAGATTAGTTTCTCATGTGTCGCATATCCTGCTTTAGTAACG 1097
|| ||||||||||| |||||||||||||||||||||||||||||||| || ||||||||
Sbjct 961 TTTAGTGTTCGAGCCGTACAGATTAGTTTCTCATGTGTCGCATATCCGGCGTTAGTAACA 1020
Query 1098 ATATATTGCGGGCAGGCTGCGTACCTAACTAAACATACTTACAATGTGTCAAATACTTTC 1157
|||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||
Sbjct 1021 ATATATTGCGGGCAGGCTGCGTACCTTACTAAACATACTTCCAATGTGTCCAATACTTTC 1080
Query 1158 TACGACTCAATCCCTGATCCGTTATACTGGCCAACATTTGTGGTAGCGGTGGCAGCATCA 1217
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 1081 TACGACTCAATCCCTGATCCGTTATACTGGCCAACATTTGTTGTGGCGGTGGCAGCATCG 1140
Query 1218 ATCATCGCGAGCCAAGCTATGATATCGGGCGCCTTTTCAGTCATCTCGCAATCTCTACGT 1277
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1141 ATCATCGCGAGCCAAGCTATGATATCGGGAGCCTTTTCAGTCATCTCGCAATCTCTACGT 1200
Query 1278 ATGGGTTGTTTCCCTCGAGTGAAGGTGGTTCACACCTCGGCTAAGTACGAGGGACAAGTC 1337
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1201 ATGGGTTGTTTCCCTCGAGTGAAAGTGGTTCACACCTCGGCTAAGTACGAGGGACAAGTC 1260
Query 1338 TATATCCCGGAGATCAACTACTTGCTCATGCTTGCATGCATCGCTGTTACCCTTGCCTTT 1397
||||||||||||||||||||||| ||||||||||||||||||||||||||| | | ||||
Sbjct 1261 TATATCCCGGAGATCAACTACTTACTCATGCTTGCATGCATCGCTGTTACCGTCG-CTTT 1319
Query 1398 -AGAACTACTGAGAAGATTGGTCACGCTTATGGGATCGCCGTTGTAACCGTCATGGTCAT 1456
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1320 CAGAACCACTGAGAAGATTGGCCACGCTTATGGGATCGCCGTTGTAACCGTCATGGTCAT 1379
Query 1457 CACAACCTTAATGGTGACTCTCATAATGTTGGTTATCTGGAAGACCAATATAGTGTGGAT 1516
|||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 1380 CACAACCTCAATGGTGACTCTCATAATGTTGGTTATCTGGAAGACGAACATAGTGTGGAT 1439
Query 1517 TGCTATCTTCTTGGTCGTCTTTGGCTCCATAGAGATGTTATACCTATCTTCGGTCATGTA 1576
|| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1440 TGTTATCTTCTTAATCGTCTTTGGCTCCATAGAGATGTTATACCTATCGTCGGTCATGTA 1499
Query 1577 CAAGTTTACAAGCGGTGGGTATTTACCACTTACGATAACGGTCGTTTTGATGGCGATGAT 1636
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1500 CAAGTTTACAAGCGGTGGGTATTTACCACTTACGGTAACGGTCGTTTTGATGGCGATGAT 1559
Query 1637 GGCGATTTGGCAATATGTTCATGTCCTCAAATACCGGTACGAGCTGAGGGAGAAGATCTC 1696
|||||||||||||||||||||||||||||| ||| |||||||||||| |||||| || ||
Sbjct 1560 GGCGATTTGGCAATATGTTCATGTCCTCAAGTACAGGTACGAGCTGAAGGAGAAAATTTC 1619
Query 1697 TCGTGAAAATGCTATACAAATGGCTACAAGTCCTGACGTAAACCGGGTTCCAGGGATTGG 1756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1620 TCGTGAAAATGCTATACAAATGGCTACAAGTCCTGACGTAAACCGGGTTCCAGGGATTGG 1679
Query 1757 TCTTTTCTACACGGAGCTTGTTAACGGTATAACTCCATTGTTCTCTCACTATATATCAAA 1816
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||
Sbjct 1680 TCTTTTCTACACGGAGCTTGTTAACGGTATAACTCCATTGTTCTCTCATTATATTTCGAA 1739
Query 1817 TCTTTCGTCCGTCCACTCGGTGTTTGTATTGATATCGATCAAGACACTTCCCGTGAACCG 1876
||||||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||| ||
Sbjct 1740 TCTTTCGTCGGTCCACTCGGTTTTTGTCTTGCTATCGATCAAGACACTTCCCGTGAATCG 1799
Query 1877 AGTGACGTCATCAGAGCGGTTCTTTTTCCGTTACGTGGGGCCAAAGGATTCCGGGATGTT 1936
||||| |||||||||||||||||||||||||||||||||| ||| ||||| || |||||
Sbjct 1800 GGTGACATCATCAGAGCGGTTCTTTTTCCGTTACGTGGGGCAAAAAGATTCAGGAATGTT 1859
Query 1937 TAGGTGTGTTGTGAGATATGGTTACAAGGAAGACATTGAGGAGCCTGATGAGTTCGAGCG 1996
||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 1860 TAGGTGTGTTGTGAGGTATGGTTACAAAGAAGACATTGAGGAGCCTGATGAGTTTGAGCG 1919
Query 1997 TCATTTTGTTTATTACTTAAAGGAATTCATTCATCACGAGCACTTCATGTCTGGAGGAGG 2056
|||||||||| ||||| |||||||||||||||||||||||||||||||||| | ||||||
Sbjct 1920 TCATTTTGTTCATTACCTAAAGGAATTCATTCATCACGAGCACTTCATGTCCGAAGGAGG 1979
Query 2057 AGGGGAGGTGGACGAGACGGACAAAGAAGAGGAACCAAATGCTG-AGACAACAGTTGTGC 2115
||| || ||||||||||| ||||||||||| |||||||||| || |||||||| ||||||
Sbjct 1980 AGGAGACGTGGACGAGACTGACAAAGAAGATGAACCAAATG-TGGAGACAACACTTGTGC 2038
Query 2116 CTTCGTCTAATTATGTCCCTTCATCGGGGCGGATCGGGTCCGCCCATTCATCTTCGTCAG 2175
|||||||||| | |||||||||||||||||||||||| ||||| |||||||||||||| |
Sbjct 2039 CTTCGTCTAACTCTGTCCCTTCATCGGGGCGGATCGGATCCGCGCATTCATCTTCGTCGG 2098
Query 2176 ACAAGATTAGGTCGGGAAGGGTCGTGCAGGTTCAATCCGTGGAGGATCAAACAGAGTTGG 2235
||||||||||||| |||| |||||| || || ||||| || ||||||||||| |||||||
Sbjct 2099 ACAAGATTAGGTCAGGAATGGTCGTACATGTGCAATCTGTTGAGGATCAAACGGAGTTGG 2158
Query 2236 TGGAGAAAGCGAGAGAGAAAGGGATGGTTTATCTAATGGGAGAGACCGAGATTACGGCAG 2295
||||||| || ||||||||||| ||||||||||||||||||||||| || ||||| || |
Sbjct 2159 TGGAGAAGGCAAGAGAGAAAGGAATGGTTTATCTAATGGGAGAGACGGAAATTACCGCGG 2218
Query 2296 -AGAAAGAGTCTTCTTTGTTTAAGAAGTTTATAGTGAACCATGCTTACAATTTCTTGAAG 2354
| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2219 CA-AAAGATTCTTCTTTGTTTAAGAAGTTTATAGTGAACCATGCTTACAATTTCTTGAAG 2277
Query 2355 AAGAATTGTCGGGAAGGAGACAAAGCACTTGCGATTCCTAGGTCGAAGCTTCTCAAGGTT 2414
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2278 AAGAATTGTCGGGAAGGAGACAAAGCACTTGCGATTCCTAGGTCAAAGCTTCTCAAGGTT 2337
Query 2415 GGCATGACCTATGAGTTATAA 2435
|||||||| ||||||||||||
Sbjct 2338 GGCATGACTTATGAGTTATAA 2358
> Ahg915047 jgi|Araly1|915047|Al_scaffold_0009_16
Length=2352
Score = 3280 bits (1776), Expect = 0.0
Identities = 2170/2363 (92%), Gaps = 16/2363 (1%)
Strand=Plus/Plus
Query 78 ATGGATGGTGAGGAACATCAAATAGATGGTGATGAAGTTAATAACCATGAGAACAAGTTG 137
|||||||||||||||| |||||||||| | | ||||| ||||||||||||||||||||||
Sbjct 1 ATGGATGGTGAGGAACCTCAAATAGAT-G-G-TGAAGCTAATAACCATGAGAACAAGTTG 57
Query 138 AATGaaaaaaaGAAATCATGGGGAAAACTATATCGACCCGACTCTTTCATCATAGAGGCC 197
|||| |||||||||||||||||||||||||| ||| || || ||||| | ||||||||||
Sbjct 58 AATGGAAAAAAGAAATCATGGGGAAAACTATTTCGGCCTGATTCTTTTACCATAGAGGCC 117
Query 198 GGACAAACTCCAA-CAAATACCGGGCGTCGC-TCATTGATGAGCTGGAGAACAACGATGA 255
||||||||||||| | ||||||||||||| | |||||||||||||||||||| || || |
Sbjct 118 GGACAAACTCCAATC-AATACCGGGCGTC-CTTCATTGATGAGCTGGAGAACGACAATAA 175
Query 256 GTTTGGCATTTCAGAGCCTAGGAGTGGTGTATGGAGATATCGGGACATCGCCATTATATG 315
||||||||||||||||||||||||| ||||||||||| |||||||||||||| || ||||
Sbjct 176 GTTTGGCATTTCAGAGCCTAGGAGTTGTGTATGGAGACATCGGGACATCGCCGTTGTATG 235
Query 316 TGTATGCAAGTACTTTCACTGATGGCATCAATGACAAAGATGATGTCGTTGGTGTTCTCT 375
| || ||||||||||||||| | ||||||||||||||||||||||| |||| |||||||
Sbjct 236 TATACGCAAGTACTTTCACTCAAGGCATCAATGACAAAGATGATGTTATTGGCGTTCTCT 295
Query 376 CGCTCATAATCTACACTATTACTCTCGTAGCGCTCCTCAAATACGTTTTCATTGTTCTTC 435
||||||| ||||||||||||||||| || || ||| ||||||| || |||||||||||||
Sbjct 296 CGCTCATTATCTACACTATTACTCTTGTCGCACTCGTCAAATATGTCTTCATTGTTCTTC 355
Query 436 AGGCTAACGATAACGGTGAAGGAGGAACATTTGCATTGTACTCACTGATATGTCGGTATG 495
|||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 356 AGGCTAACGACAACGGTGAAGGAGGAACATTTGCATTGTACTCATTGATATGTCGGTATG 415
Query 496 CGAAAATGGGACTAATTCCAAACCAAGAACCAGAAGA-TGTAGAACTCTCCAACTATACA 554
| ||||||||| |||| |||||||||||||||||||| | ||| ||||| |||||| ||
Sbjct 416 CAAAAATGGGATTAATCCCAAACCAAGAACCAGAAGACAG-AGAGCTCTCAAACTATGCA 474
Query 555 CTTGAACTTCCAACCACACAGCTCAGAAGAGCCCATATGATCAAAGAGAAGCTCGAGAAC 614
||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||
Sbjct 475 CTTGAACTTCCAACCACACAGCTTAGAAGAGCTCAAATGATCAAAGAGAAGCTCGAGAAC 534
Query 615 TCTAAATTCGCTAAGATCATTCTCTTCCTAGTCACTATTATGGGAACTTCCATGGTCATT 674
|| |||||||||||||| || |||||||| |||||||||||||| |||||||||||||||
Sbjct 535 TCCAAATTCGCTAAGATTATACTCTTCCTTGTCACTATTATGGGTACTTCCATGGTCATT 594
Query 675 GGTGATGGAATCCTTACTCCTTCCATCTCAGTACTTTCAGCAGTAAGTGGAATCAAATCT 734
|| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 595 GGCGATGGAATCCTTACTCCTTCCATATCAGTACTTTCAGCAGTAAGTGGCATCAAATCT 654
Query 735 CTCGGCCAAAACACGGTGGTGGGTGTTTCGGTTGCAATCTTGATTGTTCTATTCGCATTT 794
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 655 CTTGGCCAAGACACGGTGGTGGGTGTTTCGGTTGCAATCTTGATTGTTCTATTCGCATTT 714
Query 795 CAGCGGTTTGGCACCGATAAAGTTGGATTCTCATTCGCCCCGATCATCCTCGTATGGTTC 854
|| |||||||| |||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 715 CAACGGTTTGGAACCGATAAAGTTGGATTCTCATTCGCTCCAATCATCCTCGTATGGTTC 774
Query 855 ACATTTCTGATCGGAATTGGTCTCTTTAATCTGTTCAAGCATGACATTACCGTCTTAAAG 914
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 775 ACATTCCTGATCGGAATCGGTCTCTTTAATCTGTTCAAGCATGACATTACCGTCTTAAAG 834
Query 915 GCACTTAATCCACTCTATATCATTTACTACTTTAGAAGAACTGGTAGACAGGGTTGGATT 974
||||||||||||||||| || |||||||||||||||||| ||||||| | |||||||||
Sbjct 835 GCACTTAATCCACTCTACATTATTTACTACTTTAGAAGAGCTGGTAGGGATGGTTGGATT 894
Query 975 TCCCTCGGAGGTGTTTTCCTCTGCATCACTGGGACGGAGGCAATGTTTGCTGATCTAGGT 1034
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 895 TCCCTCGGAGGTGTTTTCCTCTGCATCACTGGGACGGAAGCCATGTTTGCTGATCTAGGT 954
Query 1035 CACTTCAGTGTTCGAGCTGTACAGATTAGTTTCTCATGTGTCGCATATCCTGCTTTAGTA 1094
|| |||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||
Sbjct 955 CATTTCAGTGTTCGAGCTGTACAGATTAGTTTCTCATGTGTGGCATATCCGGCTCTAGTA 1014
Query 1095 ACGATATATTGCGGGCAGGCTGCGTACCTAACTAAACATACTTAC-AATGTGTCAAATAC 1153
|| |||||||||||||||||||||||||| ||||||||||||| | || || ||||||||
Sbjct 1015 ACAATATATTGCGGGCAGGCTGCGTACCTTACTAAACATACTT-CGAACGTTTCAAATAC 1073
Query 1154 TTTCTACGACTCAATCCCTGATCCGTTATACTGGCCAACATTTGTGGTAGCGGTGGCAGC 1213
|||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||
Sbjct 1074 TTTCTACGACTCAATCCCAGATCCAATATACTGGCCAACATTTGTGGTGGCGGTGGCAGC 1133
Query 1214 ATCAATCATCGCGAGCCAAGCTATGATATCGGGCGCCTTTTCAGTCATCTCGCAATCTCT 1273
||||| |||||||||||||||||||||||| || ||||| ||| |||||||||| |||||
Sbjct 1134 ATCAAACATCGCGAGCCAAGCTATGATATCAGGAGCCTTCTCAATCATCTCGCAGTCTCT 1193
Query 1274 ACGTATGGGTTGTTTCCCTCGAGTGAAGGTGGTTCACACCTCGGCTAAGTACGAGGGACA 1333
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct 1194 ACGTATGGGTTGTTTCCCACGAGTGAAAGTGGTTCATACCTCGGCTAAGTACGAGGGACA 1253
Query 1334 AGTCTATATCCCGGAGATCAACTACTTGCTCATGCTTGCATGCATCGCTGTTACCCTTGC 1393
|||||| ||||| |||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 1254 AGTCTACATCCCCGAGATCAACTACTTGCTCATGCTTGCTTGCATTGCTGTTACCCTTGC 1313
Query 1394 CTTTAGAACTACTGAGAAGATTGGTCACGCTTATGGGATCGCCGTTGTAACCGTCATGGT 1453
||| ||||| ||||||||||||||||| |||||||||||||| || ||||| || |||||
Sbjct 1314 CTTCAGAACCACTGAGAAGATTGGTCATGCTTATGGGATCGCTGTCGTAACGGTTATGGT 1373
Query 1454 CATCACAACCTTAATGGTGACTCTCATAATGTTGGTTATCTGGAAGACCAATATAGTGTG 1513
||||| ||||| ||||| |||||||||||| || |||||||||||||||||||||||||
Sbjct 1374 TATCACTACCTTTATGGTAACTCTCATAATGCTGTTTATCTGGAAGACCAATATAGTGTG 1433
Query 1514 GATTGCTATCTTCTTGGTCGTCTTTGGCTCCATAGAGATGTTATACCTATCTTCGGTCAT 1573
||| || || |||||| | || |||||||||||||||||||| ||| |||| ||||||||
Sbjct 1434 GATCGCGATGTTCTTGATAGTATTTGGCTCCATAGAGATGTTGTACTTATCGTCGGTCAT 1493
Query 1574 GTACAAGTTTACAAGCGGTGGGTATTTACCACTTA-CGATAACGGTCGTTTTGATGGCGA 1632
||||||||| |||| ||||||||| |||| || | ||||||||||| ||||||||||||
Sbjct 1494 GTACAAGTTCACAAATGGTGGGTATCTACCGCT-AGCGATAACGGTCTTTTTGATGGCGA 1552
Query 1633 TGATGGCGATTTGGCAATATGTTCATGTCCTCAAATACCGGTACGAGCTGAGGGAGAAGA 1692
|||||||||| |||||||||||||| || ||||| |||| ||||||||||||||||||||
Sbjct 1553 TGATGGCGATCTGGCAATATGTTCACGTTCTCAAGTACCAGTACGAGCTGAGGGAGAAGA 1612
Query 1693 TCTCTCGTGAAAATGCTATACAAATGGCTACAAGTCCTGACGTAAACCGGGTTCCAGGGA 1752
| |||| |||||| |||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct 1613 TTTCTCCTGAAAACGCTATACACATGGCTACAAGTCCTGACATAAACCGGGTTCCAGGGA 1672
Query 1753 TTGGTCTTTTCTACACGGAGCTTGTTAACGGTATAACTCCATTGTTCTCTCACTATATAT 1812
||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||| |
Sbjct 1673 TTGGTCTGTTCTACACGGAGCTTGTTCACGGTATAACTCCATTGTTCTCTCATTATATCT 1732
Query 1813 CAAATCTTTCGTCCGTCCACTCGGTGTTTGTATTGATATCGATCAAGACACTTCCCGTGA 1872
| |||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 1733 CGAATCTTACGTCAGTCCACTCGGTTTTTGTCTTGATATCGATCAAGACACTTCCCGTGA 1792
Query 1873 ACCGAGTGACGTCATCAGAGCGGTTCTTTTTCCGTTACGTGGGGCCAAAGGATTCCGGGA 1932
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1793 ACCGAGTGACATCATCAGAGCGGTTCTTTTTCCGTTACGTGGGGCCAAAGGATTCCGGAA 1852
Query 1933 TGTTTAGGTGTGTTGTGAGATATGGTTACAAGGAAGACATTGAGGAGCCTGATGAGTTCG 1992
||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |
Sbjct 1853 TGTTTAGGTGTGTTGTGAGGTATGGTTACAAGGAAGACATTGAAGAGCCTGATGAGTTTG 1912
Query 1993 AGCGTCATTTTGTTTATTACTTAAAGGAATTCATTCATCACGAGCACTTCATGTCTGGAG 2052
||||||| |||||| ||| ||||||||||||||| |||||||||||||||||||| ||
Sbjct 1913 AGCGTCAGTTTGTTCATTCCTTAAAGGAATTCATCCATCACGAGCACTTCATGTCCACAG 1972
Query 2053 GAGGAGGGGAGGTGGACGAGACGGACAAAGAAGAGGAACCAAATGCTGAGACAACAGTTG 2112
|||||| | |||||||||||||| |||||||||||| ||||||||||||||||| |||
Sbjct 1973 GAGGAG---ATGTGGACGAGACGGAGAAAGAAGAGGAATCAAATGCTGAGACAACACTTG 2029
Query 2113 TGCCTTCGTCTAATTATGTCCCTTCATCGGGGCGGATCGGGTCCGCCCATTCATCTTCGT 2172
| ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||
Sbjct 2030 TTCCTTCGTCTAATTCTGTTCCTTCATCGGGGCGGATCGGGTCCGCGCATTCATCTTTGT 2089
Query 2173 CAGACAAGATTAGGTCGGGAAGGGTCGTGCAGGTTCAATCCGTGGAGGATCAAACAGAGT 2232
| |||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||
Sbjct 2090 CGGACAAGATTAGGTCGGGAAGGGTCGTGCAGGTGCAATCTGTGGAGGATCAAACGGAGT 2149
Query 2233 TGGTGGAGAAAGCGAGAGAGAAAGGGATGGTTTATCTAATGGGAGAGACCGAGATTACGG 2292
|| |||| ||||||||||||| ||| || |||||||||||||||||||| ||||| ||||
Sbjct 2150 TGTTGGATAAAGCGAGAGAGAGAGGAATTGTTTATCTAATGGGAGAGACGGAGATAACGG 2209
Query 2293 CAGAGAAAGAGTCTTCTTTGTTTAAGAAGTTTATAGTGAACCATGCTTACAATTTCTTGA 2352
|| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2210 CAAAGAAAGAGTCTTCTTTGTTTAAAAAGTTTATAGTGAACCATGCTTACAATTTCTTGA 2269
Query 2353 AGAAGAATTGTCGGGAAGGAGACAAAGCACTTGCGATTCCTAGGTCGAAGCTTCTCAAGG 2412
|||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||
Sbjct 2270 AGAAAAATTGTCGGGAAGGAGACAAAGCACTTGCGATTCCCAGGTCAAAGCTTCTTAAGG 2329
Query 2413 TTGGCATGACCTATGAGTTATAA 2435
|||||||||| ||||||||||||
Sbjct 2330 TTGGCATGACTTATGAGTTATAA 2352
> Ahg358974 jgi|Araly1|358974|fgenesh1_pg.C_scaffold_9000014
Length=1938
Score = 2673 bits (1447), Expect = 0.0
Identities = 1780/1943 (92%), Gaps = 13/1943 (1%)
Strand=Plus/Plus
Query 501 ATGGGACTAATTCCAAACCAAGAACCAGAAGAT-GTAGAACTCTCCAACTATACACTTGA 559
||||||||||||||||||||||||||||||||| | ||| ||||| ||||||||||||||
Sbjct 1 ATGGGACTAATTCCAAACCAAGAACCAGAAGATAG-AGAGCTCTCAAACTATACACTTGA 59
Query 560 ACTTCCAACCACACAGCTCAGAAGAGCCCATATGATCAAAGAGAAGCTCGAGAACTCTAA 619
|| |||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct 60 ACATCCAACCAAACAGCTCACAAGAGCCCATATGATCAAAGAGAAGCTAGAGAACTCTAA 119
Query 620 ATTCGCTAAGATCATTCTCTTCCTAGTCACTATTATGGGAACTTCCATGGTCATTGGTGA 679
|||| |||||||| | |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 120 ATTCTCTAAGATCCTACTCTTCCTCGTCACTATTATGGGCACTTCCATGGTCATTGGTGA 179
Query 680 TGGAATCCTTACTCCTTCCATCTCAGTACTTTCAGCAGTAAGTGGAATCAAATCTCTCGG 739
|||||||||||||||||| |||||||||||||| ||||| |||||||||||| | |||||
Sbjct 180 TGGAATCCTTACTCCTTCTATCTCAGTACTTTCGGCAGTGAGTGGAATCAAACCGCTCGG 239
Query 740 CCAAAACACGGTGGTGGGTGTTTCGGTTGCAATCTTGATTGTTCTATTCGCATTTCAGCG 799
||| |||||||||| |||||||||||||||||||||||| |||| || ||||| || ||
Sbjct 240 GCAAGACACGGTGGTTGGTGTTTCGGTTGCAATCTTGATTATTCTGTTTGCATTCCAACG 299
Query 800 GTTTGGCACCGATAAAGTTGGATTCTCATTCGCCCCGATCATCCTCGTATGGTTCACATT 859
|||||| ||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||
Sbjct 300 GTTTGGAACCGACAAAGTCGGATTCTCATTCGCTCCGATCATCCTTGTATGGTTCACATT 359
Query 860 TCTGATCGGAATTGGTCTCTTTAATCTGTTCAAGCATGACATTACCGTCTTAAAGGCACT 919
||| | |||||| || ||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 360 TCTTACCGGAATCGGCCTCTTCAATCTGTTCAAACATGACATTACCGTCTTAAAGGCACT 419
Query 920 TAATCCACTCTATATCATTTACTACTTTAGAAGAACTGGTAGACAGGGTTGGATTTCCCT 979
||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||| ||
Sbjct 420 TAATCCACTCTATATTATTTACTACTTTAGAAGAACTGGTAGAAAGGGATGGATTTCTCT 479
Query 980 CGGAGGTGTTTTCCTCTGCATCACTGGGACGGAGGCAATGTTTGCTGATCTAGGTCACTT 1039
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 480 AGGAGGTGTTTTCCTCTGCATCACTGGGACGGAAGCCATGTTTGCTGATCTAGGTCACTT 539
Query 1040 CAGTGTTCGAGCTGTACAGATTAGTTTCTCATGTGTCGCATATCCTGCTTTAGTAACGAT 1099
|||||| ||||| |||||||||||||||||||||| |||||||| ||| ||||||| ||
Sbjct 540 CAGTGTCCGAGCCATACAGATTAGTTTCTCATGTGTGGCATATCCGGCTCTAGTAACAAT 599
Query 1100 ATATTGCGGGCAGGCTGCGTACCTAACTAAACATACTTAC-AATGTGTCAAATACTTTCT 1158
|||||||||||||||||| ||||| || |||||||||| | || || |||||||||||||
Sbjct 600 ATATTGCGGGCAGGCTGCATACCTTACCAAACATACTT-CAAACGTTTCAAATACTTTCT 658
Query 1159 ACGACTCAATCCCTGATCCGTTATACTGGCCAACATTTGTGGTAGCGGTGGCAGCATCAA 1218
||||||||||||| |||||| |||||||||||||||||||||| ||||| ||||||||||
Sbjct 659 ACGACTCAATCCCAGATCCGCTATACTGGCCAACATTTGTGGTCGCGGTCGCAGCATCAA 718
Query 1219 TCATCGCGAGCCAAGCTATGATATCGGGCGCCTTTTCAGTCATCTCGCAATCTCTACGTA 1278
||||||||||||||||||||||||| || ||||| |||||||||||||| ||||||||||
Sbjct 719 TCATCGCGAGCCAAGCTATGATATCAGGAGCCTTCTCAGTCATCTCGCAGTCTCTACGTA 778
Query 1279 TGGGTTGTTTCCCTCGAGTGAAGGTGGTTCACACCTCGGCTAAGTACGAGGGACAAGTCT 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 779 TGGGTTGTTTCCCTCGAGTGAAGGTGGTTCACACCTCGGCTAAGTACGAGGGACAAGTCT 838
Query 1339 ATATCCCGGAGATCAACTACTTGCTCATGCTTGCATGCATCGCTGTTACCCTTGCCTTTA 1398
| ||||| |||||||||||||| ||||||||||| ||||| ||||||||||| ||||| |
Sbjct 839 ACATCCCCGAGATCAACTACTTCCTCATGCTTGCTTGCATTGCTGTTACCCTCGCCTTCA 898
Query 1399 GAACTACTGAGAAGATTGGTCACGCTTATGGGATCGCCGTTGTAACCGTCATGGTCATCA 1458
|||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 899 GAACCACTGAGAAGATTGGTCACGCTTATGGGATCGCTGTCGTAACCGTCATGGTCATCA 958
Query 1459 CAACCTTAATGGTGACTCTCATAATGTTGGTTATCTGGAAGACCAATATAGTGTGGATTG 1518
||||| |||||||||||||||||||| ||||||||||||| ||||| ||||||||||| |
Sbjct 959 CAACCATAATGGTGACTCTCATAATGCTGGTTATCTGGAAAACCAACATAGTGTGGATCG 1018
Query 1519 CTATC-TTCTTGGTCGTCTTTGGCTCCATAGAGATGTTATACCTATCTTCGGTCATGTAC 1577
||| | ||||||||| | ||||| || ||||||| ||||||||| || || |||||||||
Sbjct 1019 CTA-CGTTCTTGGTCTTGTTTGGTTCTATAGAGACGTTATACCTCTCGTCAGTCATGTAC 1077
Query 1578 AAGTTTACAAGCGGTGGGTATTTACCACTTACGATAACGGTCGTTTTGATGGCGATGATG 1637
||||| || ||||||||||||||||||||| |||||||||| ||||||||||| ||||||
Sbjct 1078 AAGTTCACGAGCGGTGGGTATTTACCACTTGCGATAACGGTAGTTTTGATGGCAATGATG 1137
Query 1638 GCGATTTGGCAATATGTTCATGTCCTCAAATACCGGTACGAGCTGAGGGAGAAGATCTCT 1697
|||||||||||||| ||||| ||||||| |||||||||||| |||||||||| || |||
Sbjct 1138 GCGATTTGGCAATACGTTCACATCCTCAAGTACCGGTACGAGATGAGGGAGAAAATTTCT 1197
Query 1698 CGTGAAAATGCTATACAAATGGCTACAAGTCCTGACGTAAACCGGGTTCCAGGGATTGGT 1757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1198 CGTGAAAATGCTATACAAATGGCTACAAGTCCTGACGTAAACCGGGTTCCAGGGATTGGT 1257
Query 1758 CTTTTCTACACGGAGCTTGTTAACGGTATAACTCCATTGTTCTCTCACTATATATCAAAT 1817
|| |||||||||||||||||||||||||||||||||||||||||||| ||||| || |||
Sbjct 1258 CTATTCTACACGGAGCTTGTTAACGGTATAACTCCATTGTTCTCTCATTATATCTCGAAT 1317
Query 1818 CTTTCGTCCGTCCACTCGGTGTTTGTATTGATATCGATCAAGACACTTCCCGTGAACCGA 1877
|||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| |
Sbjct 1318 CTTTCGTCCGTCCACTCGGTTTTTGTCTTGATATCGATTAAGACACTTCCCGTGAACCAA 1377
Query 1878 GTGACGTCATCAGAGCGGTTCTTTTTCCGTTACGTGGGGCCAAAGGATTCCGGGATGTTT 1937
|||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||
Sbjct 1378 GTGACGTCATCAGAGCGGTTCTTTTTCCGTTACGTGGGGCCAAAAGATTCTGGAATGTTT 1437
Query 1938 AGGTGTGTTGTGAGATATGGTTACAAGGAAGACATTGAGGAGCCTGATGAGTTCGAGCGT 1997
||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1438 CGGTGTGTTGTGAGGTATGGTTACAAAGAAGACATTGAGGAGCCTGATGAGTTCGAGCGT 1497
Query 1998 CATTTTGTTTATTACTTAAAGGAATTCATTCATCACGAGCACTTCATGTCTGGAGGA-GG 2056
||||||||| ||| ||||||||||||||||||| |||||||||| ||||| ||| || ||
Sbjct 1498 CATTTTGTTCATTGCTTAAAGGAATTCATTCATGACGAGCACTTAATGTCCGGA-GACGG 1556
Query 2057 AGGG-GAGGTGGACGAGACGGACAAAGAAGAGGAACCAAATGCTGAGACAACAGTTGTGC 2115
||| || ||||||||| || ||||||||||||||||||||||||||| ||| ||||||
Sbjct 1557 -GGGAGACTTGGACGAGATGGGCAAAGAAGAGGAACCAAATGCTGAGACCACACTTGTGC 1615
Query 2116 CTTCGTCTAATTATGT-CC--CTTCATCGGGGCGGATCGGGTCCGCCCATTCATCTTCGT 2172
|||| ||||| | ||| || |||| ||||| |||||||| ||||| |||||||||||
Sbjct 1616 CTTCCTCTAAGTCTGTCCCAGCTTCCTCGGGTCGGATCGGTTCCGCGTATTCATCTTCGC 1675
Query 2173 CAGACAAGATTAGGTCGGGAAGGGTCGTGCAGGTTCAATCCGTGGAGGATCAAACAGAGT 2232
| || |||||||||||||| ||| |||||||||| || || ||||| |||||||| |||
Sbjct 1676 CGGAAAAGATTAGGTCGGGCAGGTTCGTGCAGGTGCAGTCTGTGGAAGATCAAACGGAGC 1735
Query 2233 TGGTGGAGAAAGCGAGAGAGAAAGGGATGGTTTATCTAATGGGAGAGACCGAGATTACGG 2292
||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct 1736 TGGTGGAGAAAGCAAGAGAGAAAGGAATGGTTTATCTAATGGGAGAGACGGAGATGACGG 1795
Query 2293 CAGAGAAAGAGTCTTCTTTGTTTAAGAAGTTTATAGTGAACCATGCTTACAATTTCTTGA 2352
| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1796 CGGCGAAAGATTCTTCTTTGTTTAAGAAGTTTATAGTGAACCATGCTTACAATTTCTTGA 1855
Query 2353 AGAAGAATTGTCGGGAAGGAGACAAAGCACTTGCGATTCCTAGGTCGAAGCTTCTCAAGG 2412
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1856 AGAAGAATTGTCGGGAAGGAGACAAAGCACTTGCGATTCCTAGGTCAAAGCTTCTCAAGG 1915
Query 2413 TTGGCATGACCTATGAGTTATAA 2435
|||||||||| ||||||||||||
Sbjct 1916 TTGGCATGACTTATGAGTTATAA 1938
> Ahg947748 jgi|Araly1|947748|scaffold_703977.1
Length=257
Score = 237 bits (128), Expect = 3e-61
Identities = 140/146 (96%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 2269 TAATGGGAGAGACCGAGATTACGGCAGAGAAAGAGTCTTCTTTGTTTAAGAAGTTTATAG 2328
||||||||||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||
Sbjct 19 TAATGGGAGAGACGGAGATAACGGCGGAGAAAGAGTCTTCTTTATTTAAGAAGTTTATAG 78
Query 2329 TGAACCATGCTTACAATTTCTTGAAGAAGAATTGTCGGGAAGGAGACAAAGCACTTGCGA 2388
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 79 TGAACCATGCTTACAATTTCTTGAAGAAAAATTGCCGGGAAGGAGACAAAGCACTTGCGA 138
Query 2389 TTCCTAGGTCGAAGCTTCTCAAGGTT 2414
||||||||||||||||||||||||||
Sbjct 139 TTCCTAGGTCGAAGCTTCTCAAGGTT 164
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 98920366265
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5