BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G14070.1
Length=2465
Score E
Sequences producing significant alignments: (Bits) Value
Ahg947004 jgi|Araly1|947004|scaffold_703233.1 3596 0.0
Ahg930437 jgi|Araly1|930437|scaffold_302894.1 1681 0.0
> Ahg947004 jgi|Araly1|947004|scaffold_703233.1
Length=2225
Score = 3596 bits (1947), Expect = 0.0
Identities = 2132/2224 (96%), Gaps = 2/2224 (0%)
Strand=Plus/Plus
Query 103 ATCTTCATCTTATCTGCAAATGCAAATTCGTCTGAAACCTGATTATTCCTTCTTCATCGC 162
||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 3 ATCTTCATCTTATCTGCAAATGCAACTTCGTCTTAAACCTGATTATTCCTTCTTCATCGT 62
Query 163 CTCTTCCTCAACGATGGCTTCGACTTCTTCTTTGGGACCTTCTACACTACTCTCTTACGG 222
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 63 CTCTTCCTCAACGATGGCTTCGACTTCTTCTTTGGGACCTTCTACACTACTTTCTTACGC 122
Query 223 TTCTCCTTCTCGTCAGTTTCCTGATTTTGGGTTCAGATTGATTTCGGGTCACGAAAGTGT 282
|||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct 123 TTCTTCTTCTCGTCAATTTCCTGATTTTGGGTTCAGATTGATTTTGGGTCACGAAAGTGT 182
Query 283 TCGAATTCCATCATTCCGGCGATTTCGGGTTCACTGCGAGTCAAAGGAAAAAGAAGTGAA 342
||| ||||||||||||| |||||||||| ||||||||||||| |||||||||||||| |
Sbjct 183 TCGGATTCCATCATTCCAGCGATTTCGGATTCACTGCGAGTCCAAGGAAAAAGAAGT-TA 241
Query 343 G-CCGTCTTCTCCATTTCTTGAAAGCTCCTCGTTTTCGGGAGATGCTGCTTTGCGCTCTA 401
| ||||||| ||| ||||||||||||| || || ||||||| | |||||||||||||||
Sbjct 242 GATCGTCTTCGCCAGTTCTTGAAAGCTCGTCATTATCGGGAGGTTCTGCTTTGCGCTCTA 301
Query 402 GTGAATGGAAGGCTGTTCCTGATATTTGGAGATCATCTGCAGAAAAGTATGGTGATAGAG 461
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 302 ATGAATGGAAGGCTGTTCCTGATATTTGGAGATCATCTGCAGAAAAGTTTGGTGATAGAG 361
Query 462 TTGCATTGGTGGATCCTTATCATGATCCTCCTTTGAAACTGACGTACAAGCAGTTGGAAC 521
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 362 TTGCATTGGTTGATCCTTATCATGATCCTCCTTTGAAACTGACGTACAAGGAGTTGGAAC 421
Query 522 AAGAAATTTTGGACTTTGCTGAGGGCTTACGAGTTCTTGGAGTGAAAGCAGATGAGAAGA 581
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 422 AAGAAATTTTGGACTTTGCTGAAGGCTTACGAGTTCTTGGAGTGAAAGCAGATGAGAAGA 481
Query 582 TTGCACTTTTTGCTGATAACTCCTGCCGATGGCTTGTTTCAGATCAAGGTATAATGGCCA 641
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 482 TTGCACTTTTTGCTGATAACTCCTGTCGATGGCTTGTTTCAGATCAAGGTATAATGGCCA 541
Query 642 CAGGGGCAGTCAATGTTGTCAGAGGATCTAGGTCCTCTGTTGAAGAGTTACTGCAGATAT 701
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 542 CAGGAGCAGTCAATGTTGTCAGAGGATCTAGGTCCTCTGTTGAAGAGTTACTGCAGATTT 601
Query 702 ACCGTCATTCTGAAAGCGTAGCCATTGTTGTGGATAATCCTGAGTTTTTCAACCGCATTG 761
|||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||
Sbjct 602 ACCGTCATTCTGAAAGTGTAGCCCTTGTTGTGGATAATTCTGAGTTTTTCAACCGCATTG 661
Query 762 CTGAGTCATTTACGTCAAAGGCATCTCTGAGATTTTTGATACTTCTCTGGGGTGAGAAAT 821
||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 662 CTGAGTCGTTTACTTCAAAGGCATCTCTGAGATTTTTGATACTTCTTTGGGGTGAGAAAT 721
Query 822 CATCACTGGTCACACAGGGGATGCAGATTCCAGTTTACAGTTATGCAGAAATTATAAACC 881
||||| ||||||||||||||||||||||||||||||||| |||||||||||| | ||| |
Sbjct 722 CATCATTGGTCACACAGGGGATGCAGATTCCAGTTTACACTTATGCAGAAATAAAAAAGC 781
Query 882 AAGGACAGGAGAGTCGTGCAAAATTATCAGCATCTAATGATACCAGGAGCTATAGAAATC 941
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 782 AAGGACAGGAGAGTCGTGCAAAATTATCAGGATCTAATGATACCAGGAGCTATAGAAATC 841
Query 942 AATTCATCGATTCAGATGATACAGCTGCAATTATGTATACCAGTGGTACCACGGGAAATC 1001
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 842 AATTCATCAATTCAGATGATACAGCCGCAATTATGTATACCAGTGGTACCACGGGAAATC 901
Query 1002 CAAAAGGCGTTATGCTTACACATCGGAATCTCTTACACCAGATAAAACATTTATCCAAAT 1061
| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct 902 CGAAAGGCGTTATGCTTACACATCGGAATCTTTTACACCAGATAAAACATCTATCCAAAT 961
Query 1062 ATGTACCTGCTCAAGCTGGGGATAAATTTCTAAGCATGCTACCATCATGGCATGCCTATG 1121
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 962 ATGTACCTGCTCAAGCTGGGGATAAATTTCTAAGCATGCTGCCGTCATGGCATGCCTATG 1021
Query 1122 AACGTGCTAGTGAATACTTCATATTCACTTGTGGAGTTGAGCAAATGTATACATCTATAA 1181
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1022 AACGTGCTAGTGAATACTTCATATTCACTTGTGGAGTTGAGCAAATGTATACTTCTATAA 1081
Query 1182 GATACTTAAAGGATGATCTAAAGCGGTACCAACCGAACTATATTGTGTCCGTTCCTCTAG 1241
|||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||| |||
Sbjct 1082 GATATTTAAAGGATGATCTAAAGCGGTATCAACCAAACTATATTGTTTCCGTTCCTTTAG 1141
Query 1242 TATATGAGACACTTTACAGTGGGATTCAAAAGCAAATTTCTGCAAGTTCTGCTGGCCGTA 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1142 TATATGAGACACTTTACAGTGGGATTCAAAAGCAAATTTCTGCAAGTTCTGCTGGCCGTA 1201
Query 1302 AATTTCTAGCACTTACATTGATCAAAGTCAGTATGGCATATATGGAGATGAAAAGGATAT 1361
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1202 AATTTCTAGCACTTACATTGATCAGAGTCAGTATGGCATATATGGAGATGAAAAGGATAT 1261
Query 1362 ATGAGGGTATGTGTCTGACAAAAGAGCAAAAGCCTCCAATGTATATTGTTGCTTTTGTGG 1421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1262 ATGAGGGTATGTGTCTGACAAAAGAGCAAAAGCCTCCAATGTATATTGTTGCTTTTGTGG 1321
Query 1422 ATTGGTTGTGGGCGAGAGTAATTGCTGCCTTGTTGTGGCCATTACATATGTTGGCCAAAA 1481
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct 1322 ATTGGTTGTGGGCGAGAGTAGTTGCTGCCTTATTGTGGCCATTACATATGTTGGCCAAAA 1381
Query 1482 AGCTTATCTACAAGAAAATTCATTCGTCTATTGGGATATCGAAGGCTGGTATTAGCGGAG 1541
||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 1382 GGCTTATCTACAAGAAAATTCATTCGTCTATTGGAATATCTAAGGCTGGTATTAGCGGAG 1441
Query 1542 GTGGTAGTTTACCCATTCATGTTGACAAGTTTTTTGAGGCCATCGGTGTGATTCTACAAA 1601
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1442 GGGGTAGTTTACCCATTCATGTTGACAAGTTTTTTGAGGCCATCGGTGTGATTCTACAAA 1501
Query 1602 ATGGTTATGGTTTGACAGAGACCTCACCTGTTGTCTGTGCACGGACACTTAGCTGCAATG 1661
||||||||||||||||||||||||| || ||||||||||||||||| |||||||| ||||
Sbjct 1502 ATGGTTATGGTTTGACAGAGACCTCGCCGGTTGTCTGTGCACGGACGCTTAGCTGTAATG 1561
Query 1662 TTCTTGGCTCAGCTGGGCATCCAATGCATGGTACAGAATTCAAAATTGTAGATCCTGAGA 1721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1562 TTCTTGGCTCAGCTGGGCATCCAATGCATGGTACAGAATTCAAAATTGTAGATCCTGAGA 1621
Query 1722 CTAATAATGTACTCCCTCCTGGTTCAAAGGGCATTATCAAAGTCAGAGGTCCACAGGTTA 1781
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1622 CTAATAATGTACTCCCTCCTGGTTCAAAGGGCATTATCAAAGTCAGAGGTCCACAGATTA 1681
Query 1782 TGAAGGGTTATTATAAGAATCCATCGACTACAAAGCAAGTTCTAAATGAGAGTGGATGGT 1841
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1682 TGAAGGGTTATTATAAGAATCCATCGACCACAAAGCAAGTTCTAAATGAGAGTGGATGGT 1741
Query 1842 TCAATACAGGAGACACCGGTTGGATTGCTCCTCATCACTCAAAAGGGCGGAGTCGCCACT 1901
||||||||||||| || |||||||| |||||||||||||||| |||||||||||||| ||
Sbjct 1742 TCAATACAGGAGATACGGGTTGGATCGCTCCTCATCACTCAAGAGGGCGGAGTCGCCGCT 1801
Query 1902 GTGGAGGTGTCATTGTTCTTGAAGGCCGTGCAAAAGACACAATTGTACTTTCCACAGGTG 1961
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1802 GTGGAGGTGTCATCGTTCTTGAAGGCCGTGCAAAAGACACAATTGTACTTTCCACAGGTG 1861
Query 1962 AAAATGTGGAACCGTTGGAGATTGAAGAAGCCGCCATGAGAAGCAGGGTGATTGAACAAA 2021
|||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct 1862 AAAACGTGGAACCATTGGAGATTGAAGAAGCGGCCATGAGAAGCAGGTTGATTGAACAAA 1921
Query 2022 TTGTTGTTATTGGACAGGACCGACGTCGCCTTGGAGCTATCATTATCCCAAACAAAGAGG 2081
| ||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||
Sbjct 1922 TCGTTGTTATTGGACAGGATCGACGCCGCCTTGGAGCTATCATTATTCCAAACAAAGAGG 1981
Query 2082 AAGCACAAAGAGTAGATCCTGAAACATCCAAAGAAACACTAAAGAGCTTGGTCTACCAAG 2141
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1982 AAGCACAAAGAGTAGATCCTGAAACATCTAAAGAAACACTAAAGAGCTTGGTCTACCAAG 2041
Query 2142 AACTGAGAAAATGGACATCAGAATGTTCGTTTCAAGTCGGACCAGTCTTGATCGTCGACG 2201
|||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 2042 AACTGAAAAAATGGACATCAGAATGTTCGTTTCAAGTCGGACCGGTCTTGATCGTCGATG 2101
Query 2202 ACCCTTTCACGATAGACAACGGGTTAATGACACCAACTATGAAGATTAGACGGGACATGG 2261
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2102 AGCCTTTCACGATAGACAACGGGTTAATGACACCAACTATGAAGATTAGACGGGACAAGG 2161
Query 2262 TCGTGGCTAAATACAAAGAGGAGATTGATCAACTCTACAGTTAAGACATTTGTATTAGTC 2321
||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||
Sbjct 2162 TCGTGGCTAAATACAAAGACGAGATTGATCAACTCTATAATTAAGACATTTGTATTAGTC 2221
Query 2322 TTGT 2325
||||
Sbjct 2222 TTGT 2225
> Ahg930437 jgi|Araly1|930437|scaffold_302894.1
Length=2209
Score = 1681 bits (910), Expect = 0.0
Identities = 1464/1730 (85%), Gaps = 44/1730 (3%)
Strand=Plus/Plus
Query 386 GCTGCTTTGCGCTCTAGTGAATGGAAGGCTGTTCCTGATATTTGGAGATCATCTGCAGAA 445
||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 237 GCTGCTTTGAGCTCTAATGAATGGAAGGCTGTTCCTGATATTTGGAGATCATCTGTGGAG 296
Query 446 AAGTATGGTGATAGAGTTGCATTGGTGGATCCTTATCATGATCCTCCTT-TGAAACTGAC 504
||||| ||||| |||||||| |||||||||| |||||||| || |||| | | | | ||
Sbjct 297 AAGTACGGTGACAGAGTTGCGGTGGTGGATCCGTATCATGACCCGCCTTCT-ACATTCAC 355
Query 505 GTACAAG-CAGTTGGAACAAGAAATTTTGGACTTTGCTGAGGGCTTACGAGTTCTTGGAG 563
||| || ||||||||||||||||| |||||||||| |||||| || |||||| ||||||
Sbjct 356 TTAC-AGACAGTTGGAACAAGAAATCTTGGACTTTGTTGAGGGTTTGCGAGTTGTTGGAG 414
Query 564 TGAAAGCAGATGAGAAGATTGCACTTTTTGCTGATAACTCCTGCCGATGGCTTGTTTCAG 623
|||| |||||||||||||||||||||||||||||||||||||| || ||||||||| | |
Sbjct 415 TGAACGCAGATGAGAAGATTGCACTTTTTGCTGATAACTCCTGTCGGTGGCTTGTTGCTG 474
Query 624 ATCAAGGTATAATGGCCACAGGGGCAGTCAATGTTGTCAGAGGATCTAGGTCCTCTGTTG 683
|||||||||||||||||||||| |||||||||||||| |||||||| || ||||||||||
Sbjct 475 ATCAAGGTATAATGGCCACAGGAGCAGTCAATGTTGTTAGAGGATCCAGATCCTCTGTTG 534
Query 684 AAGAGTTACTGCAGATATACCGTCATTCTGAAAGCGTAGCCATTGTTGTGGATAATCCTG 743
|||||||| ||||||||||| ||||||| ||||| |||||| ||||||||||||| ||||
Sbjct 535 AAGAGTTATTGCAGATATACTGTCATTCGGAAAGTGTAGCCCTTGTTGTGGATAACCCTG 594
Query 744 AGTTTTTCAACCGCATTGCTGAGTCATTTACGT-CAAAGGCATCTCTGAGATTTTTGATA 802
||||||||||||||||||||||||||||| | | ||| ||| ||| | |||| ||||
Sbjct 595 AGTTTTTCAACCGCATTGCTGAGTCATTTTCTTACAA-GGCGGCTCCAAAATTTGTGATT 653
Query 803 CTTCTCTGGGGTGAGAAATCATCACTGGTCACA-CAGGGGATGCAGATTCCAGTTTACAG 861
||||||||||| || ||||| ||| |||| ||| | ||| | ||| | ||||| || ||
Sbjct 654 CTTCTCTGGGGGGAAAAATCGTCATTGGTTACAGC-GGGTAGGCACACACCAGTCTATAG 712
Query 862 TTATGCA--GAAATTATAA-ACCAAGGACAGGAGAGTCGTGCAAAATTAT-CA-GCATCT 916
||| || ||||||| || | ||||| ||||| ||||||||||| | || | ||||
Sbjct 713 TTA--CAATGAAATTA-AACAGTTTGGACAAGAGAGACGTGCAAAATT-TGCAAG-ATCT 767
Query 917 AATGATACCAGGA-GCTATAGAA-ATCAATTCATCGATTCAGATGATACAGCTGCAATTA 974
|||||| ||| | ||| ||| || |||||||| || ||||||||||||| ||||||
Sbjct 768 AATGATGTTGGGAAG-TAT-GAATATGAATTCATCCATCCAGATGATACAGCCACAATTA 825
Query 975 TGTATACCAGTGGTACCACGGGAAATCCAAAAGGCGTTATGCTTACACATCGGAATCTCT 1034
|||||||||| || ||||| |||||||||||||| |||||||| ||||||| |||| | |
Sbjct 826 TGTATACCAGCGGAACCACTGGAAATCCAAAAGGTGTTATGCTCACACATCAGAATTTGT 885
Query 1035 TACACCAGATAA-AACATTTATCCAAATATGTACCTGCTCAAGCTGGGGATAA-ATTTCT 1092
| |||||||||| || ||||||| | | ||| ||||| |||||||||| || ||||||
Sbjct 886 TGCACCAGATAAGAA-ATTTATCTGACTTTGTGCCTGCGGAAGCTGGGGA-AAGATTTCT 943
Query 1093 AAGCATGCTACCATCATGGCATGCCTATGAACGTGCTAGTGAATACTTCATATTCACTTG 1152
||| ||| | ||||| ||||||||||||||||| ||| |||||||||||||||| || ||
Sbjct 944 AAGTATGTTGCCATCGTGGCATGCCTATGAACGGGCTTGTGAATACTTCATATTTACATG 1003
Query 1153 TGGAGTTGAGCAAATGTATACATCTATAAGATACTTAAAGGATGATCTAAAGCGGTACCA 1212
|||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||| ||
Sbjct 1004 TGGAGTTGAGCAAAAGTATACGTCTATAAGATTCTTAAAGGATGATCTCAAGCGGTATCA 1063
Query 1213 ACCGA-ACTATATTGTGTCCGTTCCTCTAGTATATGAGACACTTTACAGTGGGATTCAAA 1271
||| | ||||| || | || || ||| |||||||||||||||| ||||| ||||||||||
Sbjct 1064 ACC-ACACTATCTTATTTCAGTACCTTTAGTATATGAGACACTCTACAGCGGGATTCAAA 1122
Query 1272 AGCAAATTTCTG-CAAGTTCTGCTGGCCGTAAATTTCTAGCACTTACATTGATCAAAGTC 1330
|||||||||| | |||| || ||| ||||||||| |||| ||||| ||||||||||||
Sbjct 1123 AGCAAATTTC-GACAAGCTCCCCTGTTCGTAAATTTTTAGCGCTTACGTTGATCAAAGTC 1181
Query 1331 AGTATGGCATATA-TGGAGATGAAAAGGATATATGAGGGTATGTGTCTGACAAAAGAGCA 1389
|| ||||||||| || |||||||||| || ||||||||| | ||| |||||||| | ||
Sbjct 1182 AGCCTGGCATATACTG-AGATGAAAAGAATTTATGAGGGTCTTTGTTTGACAAAAAATCA 1240
Query 1390 AAAGCCTCCAATGTATATTGTTGCTTTTGTGGATTGGTTGTGGGCGAGAGTAATTGCTGC 1449
||||||||| ||||||||||| | || || |||||||||||| |||||||| |||| |
Sbjct 1241 AAAGCCTCCGTTGTATATTGTTTCGTTGGTAGATTGGTTGTGGACGAGAGTAGTTGC-GT 1299
Query 1450 CTTGT--TGTGGCCATTACATATGTTGGCCAAAAAGCTTAT-CTACAAGAAAATTCATTC 1506
|||| | |||||||| |||||||| || |||||||| | | |||| ||||||| |||
Sbjct 1300 -TTGTCCTTTGGCCATTGCATATGTTAGCTGAAAAGCTTGTGC-ACAAAAAAATTCGTTC 1357
Query 1507 GTCTATTGGGATATCGAAGGCTGGTATTAGCGGAGGTGGTAGTTTACCCATTCATGTTGA 1566
||||||||||||| | ||||||||| |||| ||||||||||||||||| || ||||||||
Sbjct 1358 GTCTATTGGGATAACAAAGGCTGGTGTTAGTGGAGGTGGTAGTTTACCTATGCATGTTGA 1417
Query 1567 CAAGTTTTTTGAGGCCATCGGTGTGATTCTACAAAATGGTTATGGTTTGACAGAGACCTC 1626
|||||| || |||||||||||||||| | |||||||||| |||||||||||||| |||||
Sbjct 1418 CAAGTTCTTCGAGGCCATCGGTGTGAATGTACAAAATGGGTATGGTTTGACAGAAACCTC 1477
Query 1627 ACCTGTTGTCTGTGCACGGACACTTAGCTGCAATGTTCTTGGCTCAGCTGGGCATCCAAT 1686
||| ||||||| ||| |||| ||||| || |||||||||||||||| ||||||||| ||
Sbjct 1478 ACCGGTTGTCTCTGCGCGGAGGCTTAGGTGTAATGTTCTTGGCTCAGTTGGGCATCCTAT 1537
Query 1687 GCATGGTACAGAATTCAAAATTGTAGATCCTGAGACTAATAATGTACTCCCTCCTGGTTC 1746
| | ||||||||||||||||||||||| ||||||| || ||| || || ||||||||
Sbjct 1538 TAAAGATACAGAATTCAAAATTGTAGATCATGAGACTGGTACTGTTCTTCCACCTGGTTC 1597
Query 1747 AAAGGGCATTATCAAAGTCAGAGGTCCACAGGTTATGAAGGGTTATTATAAGAATCCA-T 1805
|||||||||| ||||||||||||| |||| ||| ||||| ||||| || |||||||| |
Sbjct 1598 AAAGGGCATTGTCAAAGTCAGAGGCCCACCGGTGATGAAAGGTTACTACAAGAATCCGCT 1657
Query 1806 CGACTACAAAGCAAGTTCTAAATGA-GAGTGGATGGTTCAATACAGGAGACACCGGTTGG 1864
| | || ||||||||| || |||| || ||||||||||||||| || || | ||||||
Sbjct 1658 GGCC-ACCAAGCAAGTTATAGATGACGA-TGGATGGTTCAATACTGGGGATATGGGTTGG 1715
Query 1865 ATTGCTCCTCATCACTCAAAAGGGCGGAGTCGCCA-CTGTGGAGGTGTCATTGTTCTTGA 1923
||| ||||||| || |||| ||| |||||||| | ||||||||||||||| ||||||||
Sbjct 1716 ATTACTCCTCAGCATTCAACAGGACGGAGTCGT-AGCTGTGGAGGTGTCATCGTTCTTGA 1774
Query 1924 AGGCCGTGCAAAAGACACAATTGTACTTTCCACAGGTGAAAATGTGGAACCGTTGGAGAT 1983
||||||||| || |||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct 1775 AGGCCGTGCCAAGGACACAATCGTGCTTTCCACAGGTGAAAATGTGGAACCATTGGAGAT 1834
Query 1984 TGAAGAAGCCGCCATGAGAAGCAGGGTGATTGAACAAATTGTTGTTATTGGACAGGACCG 2043
||||||||| ||||||||||||| |||| ||||||| || ||| |||||||||| |
Sbjct 1835 TGAAGAAGCGGCCATGAGAAGCAATTTGATACAACAAATAGTGGTTTTTGGACAGGATCA 1894
Query 2044 ACGTCGCCTTGGAGCTATCATTATCCCAAACAAAGAGGAAGCACAAAGAG 2093
||| |||||||||||||| ||||||||||||||||| | |||| || |||
Sbjct 1895 ACGCCGCCTTGGAGCTATTATTATCCCAAACAAAGAAGCAGCAGAAGGAG 1944
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 92902107555
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5