BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G14150.1
Length=3952
Score E
Sequences producing significant alignments: (Bits) Value
Ahg946991 jgi|Araly1|946991|scaffold_703220.1 6196 0.0
Ahg930410 jgi|Araly1|930410|scaffold_302867.1 1471 0.0
> Ahg946991 jgi|Araly1|946991|scaffold_703220.1
Length=3906
Score = 6196 bits (3355), Expect = 0.0
Identities = 3723/3898 (96%), Gaps = 35/3898 (1%)
Strand=Plus/Plus
Query 1 ATGAAGAAGCACTTTACGTTACCAAGAAACGCTATCTTACGCGACGGCGGAGAGCCACAC 60
|||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||| |||
Sbjct 21 ATGAAGAAGCACTTTACGCTACCAAGAAACACTATCTTACGCGATGGCGGAGAGCCGCAC 80
Query 61 TCGCCAAACCCTAGTATC-TCGAAATCGAAGCCTCCACGCAAATTAAGATCCGCCAAAGA 119
||| ||||||||| || | |||||||||||||||||||||||||||||||||||||||||
Sbjct 81 TCGTCAAACCCTAATA-CGTCGAAATCGAAGCCTCCACGCAAATTAAGATCCGCCAAAGA 139
Query 120 AAATGCTCCACCT-CTAGATCGGAACACGTCGACGCCTGACCATAGGTCGATGAGAA-TG 177
||||||||||||| | |||| |||| || ||| || |||||||||||||||| || ||
Sbjct 140 AAATGCTCCACCTAC-GGATCAGAACTTGTTGACCCCGGACCATAGGTCGATGA-AATTG 197
Query 178 AAGAATCCGTTG-CCTCCGCGTCCGCCGCCGTCTAATCCTCTTAAACGGAAACTTAGTGC 236
|||| |||| | || |||||||||||||||||||||||||| ||| ||||||| |||||
Sbjct 198 AAGAGTCCG-CGTCCGCCGCGTCCGCCGCCGTCTAATCCTCTCAAAAGGAAACTCAGTGC 256
Query 237 GGA-GACTGCGACGGAATCTGGGTTTTCAGACTCAGGTGTCAAGGTTATAGTTAGAATGA 295
||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 257 GGATG-CTGCGACGGAATCTGGGTTTTCAGACTCCGGTGTCAAGGTTATAGTTAGAATGA 315
Query 296 AGCCTCTAAACAAAGGGGAGGAAGGTGATATGATAGTAGAAAAGATGTCCAAAGATTCCC 355
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 316 AGCCTCTAAACAAAGGTGAGGAAGGTGATATGATAGTAGAAAAGATGTCCAAAGATTCCC 375
Query 356 TCACAGTTAGTGGACAAACTTTCACATTCGACTCAATTGCAAATCCGGAGTCGACACAGG 415
||||| || |||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 376 TCACAATTGGTGGGCAAACTTTCACATTCGACTCAATTGCTTATCCGGAGTCGACACAGG 435
Query 416 AACAAATGTTTC-AGCTTGTGGGAGCCCCTCTTGTTGAAAATTGTCTATCTGGATTTAAC 474
|||||||||||| || | |||||||| |||||||||||||||||||||||||||||||||
Sbjct 436 AACAAATGTTTCAAG-TCGTGGGAGCGCCTCTTGTTGAAAATTGTCTATCTGGATTTAAC 494
Query 475 AGTTCTGTATTTGCTTATGGACAGACTGGTAGTGGAAAAACATATACCATGTGGGGTCCT 534
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 495 AGTTCTGTATTTGCCTATGGACAGACTGGTAGTGGGAAAACATATACCATGTGGGGTCCT 554
Query 535 GCAAATGGATTGTTGGAAGAGCACCTCTGCGGTGACCAAAGAGGTTTGACCCCACGTGTC 594
||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 555 GCATATGGATTGTTGGAAGAGCACCTCCGCGGTGACCAAAGGGGTTTGACCCCACGTGTC 614
Query 595 TTTGAACGATTGTTTGCCCGAATCAAAGAGGAACAAGTCAAGCATGCTGAAAGGCAACTC 654
|||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 615 TTTGAACGTTTGTTTGCCCGAATCAAAGAGGAACAAGTCAAGCATGCTGAAAGAAAACTC 674
Query 655 AATTACCAATGTCGGTGCTCATTACTCGAGATTTACAACGAGCAAATAACAGACCTACTG 714
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 675 AATTACCAGTGCCGGTGCTCATTACTCGAGATTTACAACGAGCAAATAACAGACCTACTG 734
Query 715 GACCCAAGCCAGAAAAACCTGATGATTAGAGAAGATGTCAAGTCAGGTGTTTATGTTGAA 774
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 GATCCAAGCCAGAAAAACCTGATGATTAGAGAAGATGTCAAGTCAGGTGTTTATGTTGAA 794
Query 775 AATCTGACTGAGGAATACGTAAAAAACTTGACAGACGTGTCACAGCTTCTGATCAAGGGT 834
||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct 795 AATCTGACTGAGGAATACGTAAAAAGCTTGACAGACGTGTCACAGCTTCTGATTAAGGGT 854
Query 835 TTGGGAAATAGAAGGACTGGTGCAACGAGTGTAAACACAGAAAGTTCAAGGTCACATTGC 894
||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct 855 TTGGGAAATAGAAGGACTGGTGCAACGAGTGTAAATGCAGAGAGTTCAAGGTCACATTGC 914
Query 895 GTATTTACTTGCGTTGTTGAATCTCGGTGCAAGAATGTTGCAGATGGCTTAAGCAGCTTT 954
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 915 GTATTTACTTGTGTTGTTGAATCTCGGTGCAAGAATGTTGCAGATGGGTTAAGCAGCTTT 974
Query 955 AAGACAAGCCGAATAAACCTTGTTGATCTGGCTGGTTCTGAACGACAAAAATCAACTGGG 1014
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 975 AAAACAAGCCGAATAAACCTTGTTGATCTGGCTGGTTCTGAACGACAAAAATCAACTGGG 1034
Query 1015 GCAGCCGGAGAACGTCTGAAGGAAGCTGGGAACATCAATCGATCGCTCTCTCAGCTGGGG 1074
||||| |||||||||||||||||||||||||| || |||||||||||||||||||| |||
Sbjct 1035 GCAGCAGGAGAACGTCTGAAGGAAGCTGGGAATATTAATCGATCGCTCTCTCAGCTTGGG 1094
Query 1075 AACTTGATTAACATCCTCGCAGAGATTTCTCAAACAGGGAAGCCAAGGCATATACCTTAC 1134
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1095 AACTTGATTAACATCCTCGCAGAGATTTCTCAAACAGGGAAGCCAAGGCATATACCTTAT 1154
Query 1135 AGGGATTCCAGATTAACATTTTTATTGCAAGAGTCTCTTGGTGGGAATGCAAAGTTAGCA 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1155 AGGGATTCCAGATTAACATTTTTATTGCAAGAGTCTCTTGGTGGGAATGCAAAGTTAGCA 1214
Query 1195 ATGGTTTGTGCAGTTTCTCCTTCTCAAAGTTGCAGGAGTGAAACCTTCAGCACCTTGAGA 1254
|||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 1215 ATGGTTTGTGCAATTTCTCCTTCTCAAAGTTGCAGAAGCGAAACCTTCAGCACCTTGAGA 1274
Query 1255 TTTGCTCAGCGTGCAAAGGCAATACAGAATAAGGCTGTTGTCAATGAAGTGATGCAGGAT 1314
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1275 TTTGCTCAGCGTGCAAAGGCAATCCAGAATAAGGCTGTTGTCAATGAAGTGATGCAGGAT 1334
Query 1315 GATGTAAATTTCTTGCGTGGAGTGATACACCAGCTGAGGGATGAACTACAAAGGATGAAG 1374
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1335 GATGTAAATTTCTTGCGTGGAGTGATACGCCAGCTGAGGGATGAACTACAAAGGATGAAG 1394
Query 1375 AATGATGGAAATAATCCAACCAATCCAAATGTTGCTTATTCCACTGCATGGAATGCACGT 1434
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1395 GATGATGGAAATAATCCAACCAATCCAAATGTTGCTTATTCCACTGCATGGAATGCACGT 1454
Query 1435 AGAAGTTTGAATTTATTAAGAAGCTTCGGTCTGGGTCATCCAAGGTCCTTACCTCATGAA 1494
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1455 AGAAGTTTGAATTTATTAAGAAGCTTCGGTCTGGGTTATCCAAGGTCCTTACCTCATGAA 1514
Query 1495 GATAATGATGGTGATATTGAGATGGAAATTGATGAGGCTGCTGTTGAAAGGCTTTGTGTT 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1515 GATAATGATGGTGATATTGAGATGGAAATTGATGAGGCTGCTGTTGAAAGGCTTTGTGTT 1574
Query 1555 CAAGTGGGTTTGCAATCATCTTTAGCTTCTGAGGGGATCAATCACGATATGAACAGAGTA 1614
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1575 CAAGTGGGTTTGCAATCATCTTTAGCTTCTGAGGGGATCAATCATGATATGAACAGAGTA 1634
Query 1615 AAGAGTATACATTCATCTGATGGCCAATCTATAGAAAAGCGGCTTCCTGAGGACTCAGAT 1674
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1635 AAGAGTATACATTTATGTGATGGCCAATCTATAGAAAAGCGGCTTCCTGAGGACTCAGAT 1694
Query 1675 GTTGCCATGGAGGATGCTTGTTGCCATACTGAGAACCATGAACCAGAAACCGTGGATAAT 1734
|||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct 1695 GTTGCCATGGTGGATGCTTGTTGCCATTCTGAGAACCATGAACCAGAAACAGTGGATAAT 1754
Query 1735 ATGAGAACTGAGACAGAGACTGGCATCAGAGAAAATCAGATCAAGACACACTCGCAAACT 1794
||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||
Sbjct 1755 GTGAGAACTGAGACAGAGACTGGCATCACAGAAAATCAGATCAAGACACACT--C-AACT 1811
Query 1795 TTAGATCACGAGTCCAGTTTCCAGCCTCTTTCAGTCAAGGATGCTCTTTGTTCTTCACTG 1854
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1812 TTAGATCACGACTCCAGTTTCCAGCCTCTTTCAGTCAAGGATGCTCTTTGTTCTTCACTG 1871
Query 1855 AACAAGTCAGAGGATGTGTCATCATGCCCTGACTTAGTTCCGCAAGACGTTACTTCAGCA 1914
|||||||| ||||||||| |||||||||||||| | | | |||||||||| |
Sbjct 1872 AACAAGTCGGAGGATGTGCCATCATGCCCTGAC--A--T-------A-GTTACTTCAGAA 1919
Query 1915 AATGTATTGATAGCTGATGGAGTAGATGATCCAGAGCACTTAGTAAATTCTGCATCTCCC 1974
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1920 AATGTATTGATAGCTGATGGATTAGATGATCCAGAGCACTTAGTAAATTCTGCATCTCCT 1979
Query 1975 AGTCTTTGTATAGATCCAGTTGGTGCGACTCCTGTATTAAAATCTCCCACACTGAGCGTC 2034
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1980 AGTCTTTGTATAGATCCAGTTGGTGCGACTCCTGTATTAAAATCTCCCACACTGAGTGTC 2039
Query 2035 TCTCCTACGATTAGAAATAGCAGGAAAAGCTTGAAGACATCAGAATTGTCAACAGCATCT 2094
|||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct 2040 TCTCCTACTATTAGAAATAGCAGGAAAAGCTTGAAGACATCGGAAATGTCAACAGCATCT 2099
Query 2095 CAGAAGGATAGTGAAGGAGAAAATTTAGTTACAGAAGCTGCGGACCCATCTCCGGCTACA 2154
||||||| || ||||||||| ||||||||||||||||||||||| ||||||| |||||||
Sbjct 2100 CAGAAGGGTACTGAAGGAGACAATTTAGTTACAGAAGCTGCGGAACCATCTCTGGCTACA 2159
Query 2155 TCCAAAAAGATGAATAACTGTTCTAGTGCTTTGTCTACGCAGAAGAGCAAAGTTTTTCCT 2214
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2160 TCCAAAAAGATGAATAACTGTTCTAGTGCTTTGTCTACACAGAAGAGCAAAGTTTTTCCT 2219
Query 2215 GTACGGACTGAGCGGTTGGCATCTAGCCTCCACAAAGGAATTAAACTTCTTGAGTCGTAT 2274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2220 GTACGGACTGAGCGGTTGGCATCTAGCCTCCACAAAGGAATTAAACTTCTTGAGTCGTAT 2279
Query 2275 TGCCAGAGTACAGCTCAAAGACGATCGACGTACAGGTTTTCCTTCAAAGCTCCAGATAGT 2334
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct 2280 TGCCAGAGTACAGCTCAAAGACGATCGACATACAGGTTTTCCTTCAAAGCTCCAGATTGT 2339
Query 2335 GAGCCTTCGACCTCTATAAGTAAGGCTGATGCAGGTGTGCAGACCATTCCCGGAGCTGAT 2394
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2340 AAGCCTTCAACCTCTATAAGTAAGGCTGATGCAGGTGTGCAGACCATTCCCGGAGCTGAT 2399
Query 2395 GCAATATCAGAGGAGAATACAAAAGAGTTTCTGTGCTGTAAATGCAAATGCAGAGAACAA 2454
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 2400 GCAATATCAGAGGAGAATACAAAAGAGTTTCTGTGCAGTAAATGCAAATGCAGAGAAGAA 2459
Query 2455 TTTGATGCCCAGCAAATGGGTGACATGCCAAATCTTCAGTT---AGTACCTGTTGACAAC 2511
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2460 TTTGATGCCCAGCAAATGGGTGACATGCCAAATCTTCAGTTTGTAGTACCTGTTGACAAC 2519
Query 2512 TCGGAAGTGGCAGAAAAATCCAAGAATCAAGTTCCCAAAGCAGTAGAAAAGGTTCTAGCA 2571
||||||||| |||||||| |||||| ||||||||||||||||| |||||||||||||||
Sbjct 2520 TCGGAAGTGACAGAAAAAGCCAAGAGCCAAGTTCCCAAAGCAGTGGAAAAGGTTCTAGCA 2579
Query 2572 GGTTCTATCAGGAGGGAAATGGCTCTGGAAGAGTTCTGCACTAAACAAGCCTCTGAGATA 2631
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2580 GGATCTATCAGGAGGGAAATGGCTCTAGAAGAGTTCTGCACTAAACAAGCCTCTGAGATA 2639
Query 2632 ACCCAACTTAACCGACTGGTACAACAATACAAACATGAGAGAGAGTGCAATGCCATCATA 2691
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2640 ACCCAACTTAACCGACTGGTACAACAATACAAACATGAGAGAGATTGCAATGCCATCATA 2699
Query 2692 GGACAAACAAGGGAGGACAAAATTATTCGCCTTGAAAGCCTTATGGATGGCGTATTATCT 2751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2700 GGACAAACAAGGGAGGACAAAATTATTCGCCTTGAAAGCCTTATGGATGGCGTATTATCT 2759
Query 2752 AAGGAGGATTTCCTTGATGAAGAATTTGCTTCTCTTCTCCATGAACATAAGCTTCTAAAG 2811
|||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||
Sbjct 2760 AAGGAGGATTTCCTGGATGAAGAATTTGCTTCTCTCCTGCATGAACATAAGCTTCTAAAG 2819
Query 2812 GACATGTATCAGAATCACCCTGAAGTGCTTAAGACGAAGATTGAGTTGGAAAGAACGCAA 2871
||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 2820 GACATGTATCAAAATCACCCTGAAGTGCTTCAGACGAAGATTGAGTTGGAAAGAGCGCAA 2879
Query 2872 GAAGAGGTCGAGAATTTCAAGAACTTTTATGGTGACATGGGAGAACGGGAAGTGTTATTG 2931
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2880 GAAGAGGTCGAGAATTTCAAGAACTTTTATGGTGACATGGGAGAAAGGGAAGTGTTATTG 2939
Query 2932 GAAGAGATTCAGGATTTGAAGTTGCAGCTGCAATGTTACATTGACCCTTCTCTTAAATCA 2991
||||||||||||||||| ||| ||||||| || |||||||||||||||||||||||||||
Sbjct 2940 GAAGAGATTCAGGATTTAAAGATGCAGCTACAGTGTTACATTGACCCTTCTCTTAAATCA 2999
Query 2992 GCTCTGAAAACGTGTACCCTGCTTAAGCTTTCATACCAAGCTCCCCCAGTTAACGCTATT 3051
|||| |||||||||| ||||||| ||||| ||||||||||||||||||||| | ||||||
Sbjct 3000 GCTCGGAAAACGTGTTCCCTGCTAAAGCTATCATACCAAGCTCCCCCAGTTGATGCTATT 3059
Query 3052 CCTGAGTCACAGGACGAGAGTCTTGAGAAGACATTAGAACAGGAAAGACTTTGTTGGACA 3111
||||| ||||||||| ||||||| | |||||||||||||||||||||||||||||||||
Sbjct 3060 CCTGAATCACAGGACAAGAGTCTCGTGAAGACATTAGAACAGGAAAGACTTTGTTGGACT 3119
Query 3112 GAGGCAGAGACCAAATGGATTTCTCTCTCCGAGGAATTAAGAACTGAGCTTGAAGCCAGT 3171
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3120 GAGGCAGAGACCAAATGGATTTCTCTCGCCGAGGAATTAAGAACTGAGCTTGAAGCCAGT 3179
Query 3172 AAGGCGCTGATT-AATAAGCAGAAACATGAACTTGAAATTGAGAAAAGATGCGGGGAGGA 3230
|||| |||| || |||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 3180 AAGGTGCTG-TTGAATAAGCAGAAACATGAACTTGAAATTGAGAAAAGATGTGGGGAAGA 3238
Query 3231 GTTGAAAGAAGCAATGCAGATGGCCATGGAAGGGCATGCACGGATGCTTGAACAATATGC 3290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3239 GTTGAAAGAAGCAATGCAGATGGCCATGGAAGGGCATGCACGGATGCTTGAACAATATGC 3298
Query 3291 AGACCTGGAAGAGAAGCATATGCAATTGCTTGCAAGACATAGAAGGATTCAAGACGGAAT 3350
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 3299 AGACCTGGAAGAGAAGCATATGCAATTGCTTGCTAGACATAGAAGGATTCAAGACGGAAT 3358
Query 3351 AGATGATGTCAAAAAGGCAGCTGCAAGAGCTGGAGTCAGAGGAGCAGAGTCCAGATTCAT 3410
||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||
Sbjct 3359 AGATGATGTCAAAAAGGCAGCGGCAAGAGCCGGAGTCAGAGGAGCAGAGTCCAAATTCAT 3418
Query 3411 AAATGCACTTGCAGCAGAAATTTCAGCCTTAAAGGTAGAAAAAGAGAAGGAGAGACAATA 3470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3419 AAATGCACTTGCAGCAGAAATTTCAGCCTTAAAGGTAGAAAAAGAGAAGGAGAGACAATA 3478
Query 3471 CCTGAGGGATGAGAACAAAAGTCTCCAAACACAACTAAGAGATACAGCTGAAGCCATACA 3530
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 CTTGAGGGATGAGAACAAAAGTCTCCAAACACAACTAAGAGATACAGCTGAAGCCATACA 3538
Query 3531 AGCAGCTGGAGAGTTACTTGTTCGGCTTAAAGAAGCCGAAGAGGGATTAACAGTTGCACA 3590
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3539 AGCAGCTGGAGAATTACTTGTTCGGCTTAAAGAAGCCGAAGAGGGATTAACAGTTGCACA 3598
Query 3591 GAAACGTGCGATGGATGCAGAGTATGAAGCTGCAGAAGCATATAGACAGATTGACAAGCT 3650
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3599 GAAACGCGCAATGGATGCAGAGTATGAAGCTGCAGAAGCATATAGACAGATTGACAAGCT 3658
Query 3651 GAAGAAGAAACATGAAAACGAAATCAACACACTTAACCAACTCGTCCCACAATCTCATAT 3710
||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 3659 GAAGAGGAAACATGAAAACGAAATCAACACTCTTAACCAACTCGTCCCTCAATCTCATAT 3718
Query 3711 TCACAATGAATGCTCTACCAAATGTGATCAAGCCGTGGAACCATCAGTAAATGCAAGTAG 3770
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 3719 TCACAATGAATGCTCTACCAAATGTGATCAAGCCGTGGAACCATCAGAAAATGCAAGT-G 3777
Query 3771 TGAGCAGCAATGGAGAGATGAGTTTGAGCCGCTTTACAAAAAAGAAACTGAGTTTTCAAA 3830
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 3778 --AGCAGCAATGGAGAGATGAATTTGAGCCGCTTTACAAAAAAGAAACCGAGTTTTCAAA 3835
Query 3831 TCTTGCTGAGCCTTCTTGGTTTTCGGGTTATGATAGGTGCAACATATAATTCTAATAT 3888
|||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct 3836 TCTTGCTGAGCCCTCTTGGTTTTCGGGTTACGATCGGTGCAACATATAATTCTAATAT 3893
> Ahg930410 jgi|Araly1|930410|scaffold_302867.1
Length=3973
Score = 1471 bits (796), Expect = 0.0
Identities = 1381/1660 (83%), Gaps = 53/1660 (3%)
Strand=Plus/Plus
Query 6 GAAGCACTTT-ACGTTACCAAGAAACGCTATCTT-ACGCGACGGCGGAGAGCCACACTCG 63
|||||| ||| | | | |||||||||||| |||| | | || |||||| |||| |||
Sbjct 23 GAAGCA-TTTCATGATGCCAAGAAACGCTGTCTTGA-GGGATATTGGAGAGTCACAATCG 80
Query 64 CCAAACCCTAGTATCTCGAAATCGAAGCCTCCACGCAA-ATTAAGATCCGCCAAAGAAAA 122
|||||| ||||| | |||||||||| | | | | || ||| ||||| || ||||| ||
Sbjct 81 CCAAACACTAGTTTGACGAAATCGAAATCACAAAGAAAGATT-AGATCTGCTAAAGAGAA 139
Query 123 TGCTCCACCTCTAGATCGGAACACGTCGACGCCTGACCATAGGTC-GAT---GAG-AA-T 176
||||||||||| |||| |||| ||| | |||||| ||||| || | | | || |
Sbjct 140 TGCTCCACCTCCGGATCTGAACTCGTTGTTGCCTGATCATAGATCTTCTCCGGCGAAATT 199
Query 177 GAAGAATCCGTTGCCTCCGCGTCCGCCGCCGTCTAATCCTCTTAAACGGAAACTTAGTGC 236
||||| ||| |||||||||||||| ||| |||||||||||||||||||||| || | |||
Sbjct 200 GAAGAGTCCTTTGCCTCCGCGTCCTCCGTCGTCTAATCCTCTTAAACGGAAGCTAATTGC 259
Query 237 GGAGACTGC----G---ACGGA--A--T-CTGGGTTTTCAGACTCAGGTGTCAAGGTTAT 284
||| |||| | | ||| | | ||||| |||||||||| ||||||||||||||
Sbjct 260 TGAGGCTGCGGGGGAAAATGGAGTAGCTGCTGGGGTTTCAGACTCTGGTGTCAAGGTTAT 319
Query 285 AGTTAGAATGAAGCCTCTAAACAAAGGGGAGGAAG-GTGATATGATAGTAGAAAAGATGT 343
||| ||||||||||||| || |||||| ||||||| | || ||||||||| ||||||| |
Sbjct 320 AGTCAGAATGAAGCCTCCAAGCAAAGGTGAGGAAGAG-GAGATGATAGTAAAAAAGATCT 378
Query 344 CCAAAGATTCCCTCAC-AGTTAGTGGACAAACTTTCACATTCGACTCAATTGCAAATCCG 402
|||| ||| ||||||| | ||| || ||| |||||||||||||| || ||||| | ||
Sbjct 379 CCAACGATGCCCTCACTA-TTAATGAACAGACTTTCACATTCGATTCGATTGCTGACCCA 437
Query 403 GAGTCGACACAGGAACAAATGTTTCAGCTTGTGGGAGCCCCTCTTGTTGAAAATTGTCTA 462
||||| |||||||| | || |||||||||||||||||||||||||| ||||| |||||
Sbjct 438 GAGTCAACACAGGATGAGATCTTTCAGCTTGTGGGAGCCCCTCTTGTAGAAAACTGTCTG 497
Query 463 TCTGGATTTAACAGTTCTGTATTTGCTTATGGACAGACTGGTAGTGGAAAAACATATACC 522
| ||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct 498 GCCGGATTTAACAGTTCTGTTTTTGCCTATGGACAGACTGGTAGTGGGAAAACATATACC 557
Query 523 ATGTGGGGTCCTGCAAATGGATTGTTGGAAGAGCACCTCT-GCGGTGACCAAAGAGGTTT 581
|||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||
Sbjct 558 ATGTGGGGTCCTGCCAATGGATTGTTGGAAGAGCACCT-TAGTGGTGACCAAAGAGGTTT 616
Query 582 GACCCCACGTGTCTTTGAACGATTG-T-TT-GCCCGAATCAAAGAGGAACAAGTC-AAGC 637
||| ||||||||||||| | |||| | || ||||| ||| ||||| |||| | ||||
Sbjct 617 GACACCACGTGTCTTTG-A--ATTGCTCTTCGCCCGTCTCAGTGAGGAGCAAG-CAAAGC 672
Query 638 ATGCTGAAAGGCAACTCAATTACCAATGTCGGTGCTCATTACTCGAGATTTACAACGAGC 697
||||||||||||| || || ||||| || || || || || |||||||| |||||||| |
Sbjct 673 ATGCTGAAAGGCAGCTAAAGTACCAGTGCCGCTGTTCGTTTCTCGAGATATACAACGAAC 732
Query 698 AAATAACAGACCTACTGGACCCAAGCCAGAA-AAACCTGATGATTAGAGAAGATGTCAAG 756
|||||||||| || |||| || ||||| || ||||||||||||||||||||||||||||
Sbjct 733 AAATAACAGATCTTTTGGATCCGAGCCA-AAGAAACCTGATGATTAGAGAAGATGTCAAG 791
Query 757 TCAGGTGTTTATGTTGAAAATCTGACTGAGGAATACGTAAAAAACTTGACA-GACGTGTC 815
|| ||||||||||||||||||||||||||||| ||||| |||||||||| | || ||||
Sbjct 792 TCCGGTGTTTATGTTGAAAATCTGACTGAGGAGTACGTGAAAAACTTGA-AGGATTTGTC 850
Query 816 ACAGCTTCTGATCAAGGGTTTGGGAAATAGAAGGACTGGTGCAACGAGTGTAAACACAGA 875
| |||||||| | ||||| |||| ||| ||||||||||||||||| ||||||||| ||||
Sbjct 851 AAAGCTTCTGGTTAAGGGCTTGGCAAACAGAAGGACTGGTGCAACAAGTGTAAACGCAGA 910
Query 876 AAGTTCAAGGTCACATTGCGTATTTACTTGCGTTGTTGAATCTCGGTGCAAGAATGTTGC 935
||||||||||| ||||| ||||||||||| ||||| || || | ||||||| ||||||
Sbjct 911 GAGTTCAAGGTCGCATTGTGTATTTACTTGTGTTGTCGAGTCCCACTGCAAGAGTGTTGC 970
Query 936 AGATGGCTTAAGCAGCTTTAAGACAAGCCGAATAAACCTTGTTGATCTGGCTGGTTCTGA 995
|||||| ||||||||||| || ||||| |||| || |||||||||||||||||||| ||
Sbjct 971 AGATGGTTTAAGCAGCTTCAAAACAAGTAGAATCAATCTTGTTGATCTGGCTGGTTCAGA 1030
Query 996 ACGACAAAAATCAACTGGGGCAGCCGGAGAACGTCTGAAGGAAGCTGGGAACATCAATCG 1055
| | ||||||| ||| || ||||| || || ||| |||||||||||||||| || |||||
Sbjct 1031 AAGGCAAAAATTAACCGGTGCAGCAGGCGATCGTTTGAAGGAAGCTGGGAATATAAATCG 1090
Query 1056 ATCGCTCTCTCAGCTGGGGAACTTGATTAACATCCTCGCAGAGATTTCTCAAACAGGGAA 1115
||| || || || || ||||| ||||| ||||| || ||||| ||||| |||||||||||
Sbjct 1091 ATCACTTTCCCAACTTGGGAATTTGATCAACATTCTAGCAGAAATTTCACAAACAGGGAA 1150
Query 1116 GCCAAGGCATATACCTTACAGGGATTCCAGATTAACATTTTTATTGCAAGAGTCTCTTGG 1175
|| ||| |||||||| || || |||||||| || |||||| |||| ||||||||||| ||
Sbjct 1151 GCAAAGACATATACCCTATAGAGATTCCAGGTTGACATTTCTATTACAAGAGTCTCTAGG 1210
Query 1176 TGGGAATGCAAAGTTAGCAATGGTTTGTGCAGTTTCTCCTTCTCAAAGTTGCAGGAGTGA 1235
|||||||||||| ||||| |||||||||||||||||||| || |||||||| |||| |||
Sbjct 1211 TGGGAATGCAAAATTAGCTATGGTTTGTGCAGTTTCTCCCTCGCAAAGTTGTAGGAATGA 1270
Query 1236 AACCTTCAGCACCTTGAGATTTGCTCAGCGTGCAAAGGCAATACAGAATAAGGCTGTTGT 1295
||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct 1271 AACCTTCAGCACCTTGAGATTTGCTCAGCGTGCAAAGGCGATACAGAACAAGGCAGTTGT 1330
Query 1296 CAATGAAGTGATGCAGGATGATGTAAATTTCTTGCGTGGA-GTGATACACCAGCTGAGGG 1354
||||||||| ||||| |||||||||||||||||||| ||| ||||||| |||||||||||
Sbjct 1331 CAATGAAGTAATGCAAGATGATGTAAATTTCTTGCG-GGAAGTGATACGCCAGCTGAGGG 1389
Query 1355 ATGAACTACAAAGGATGAAG-A-A-TGATGGAAATAATCCAACCAATCCAAATGTTGCTT 1411
||||||| |||||| ||||| | | | ||||||| || ||||| || ||||||| ||||
Sbjct 1390 ATGAACTGCAAAGGGTGAAGGATAATAATGGAAACAACCCAACAAACCCAAATGCAGCTT 1449
Query 1412 ATTCCACTGCATGGAATGCACGTAGAAGTTTGAATTTATTAAGAAGCTTCGGTCTGGGTC 1471
|| ||||| | |||||||| ||||||||| ||| ||| ||||||||||| || |||||||
Sbjct 1450 ATACCACTTCCTGGAATGCGCGTAGAAGTCTGAGTTTGTTAAGAAGCTTTGGCCTGGGTC 1509
Query 1472 ATCCAAGGTCCTTACCTCATGAAGATAATGATGGTGATATTGAGATGGAAATTGATGAGG 1531
|||||| ||| ||||| ||| |||| ||||||| || | ||||||||||||||| ||||
Sbjct 1510 ATCCAAAGTCATTACCAAATGGAGATGATGATGGGGACACTGAGATGGAAATTGACGAGG 1569
Query 1532 CTGCTGTTGAAAGGCTTTGTGTTCAAGTGGGTTTGCAATCATCTTTAGCTTCTGAGGGGA 1591
||||||||||||||||||| |||| ||| ||| || || | || | |||| |
Sbjct 1570 AGGCTGTTGAAAGGCTTTGTGCTCAAAAGGGCTTG---TC-TCC--ACCTGCCGAGGACA 1623
Query 1592 TCAATCACGATATGAACAGAGTAAAGAGTATACATTCATC 1631
|||||| || |||| ||||||| ||| ||| |||||||
Sbjct 1624 ACAATCAGGACATGAGCAGAGTAGAGAAAATAAATTCATC 1663
Score = 1319 bits (714), Expect = 0.0
Identities = 1408/1736 (81%), Gaps = 76/1736 (4%)
Strand=Plus/Plus
Query 2003 CTCCTGTATTAAAATCTCCCACACTGAGCGTCTCTCCTACGATTAGAAATAGCAGGAAAA 2062
|||||| | ||| | ||||||| ||||| |||||||| ||| ||||||||||||||||
Sbjct 2041 CTCCTGGACTAATACCTCCCACTGAGAGCGCCTCTCCTAAGATCAGAAATAGCAGGAAAA 2100
Query 2063 GCTTGAAGACATCA-GAATTGTCAACAGCATCTCAGAAGGATAGTGAAG-GAG-AAA--A 2117
|||||| |||| || || |||| || ||||| || || ||| || || ||| ||| |
Sbjct 2101 GCTTGAGGACAACATCAA-TGTCCACCGCATCACAAAAAAATATTG-AGAGAGCAAACCA 2158
Query 2118 TTTAGTTACAGAAGCTGCGGACCCATCTCCGGCTACATCCAAAAAGATGAAT-AA-CTGT 2175
||| || ||||| || ||| || |||||||||| |||| | || || | || ||
Sbjct 2159 GTTAACTAAAGAAGTTGTGGAACCTTCTCCGGCTATGTCCACAGAGGTG-TTAAACCT-A 2216
Query 2176 TCTAGTGCTTTGTCTACGCAGAAGAGCAAAGTTTTTCCTGTACGGACTGA-GCGGTTGGC 2234
| ||||||||||||||| |||| || ||| ||||||||| | ||| | | |||||
Sbjct 2217 TATAGTGCTTTGTCTACAAAGAAAAGTGAAGCTTTTCCTGTGCCAACT-AGGTAATTGGC 2275
Query 2235 ATCTAGCCTCCACAAAGGAATTAAACTTCTTGAGTCGTATTGCCAGAGTACAGCTCAAAG 2294
| ||||||| |||| ||| || ||||||||||| || || | |||||||||||||| ||
Sbjct 2276 AGCTAGCCTTCACAGAGGCATGAAACTTCTTGACTCATACCGGCAGAGTACAGCTCATAG 2335
Query 2295 ACGATCGACGTACAGGTTTTCCTTCAAAGCTCCAG-ATAGTGAGCCTTCGACC-TCTATA 2352
||||||||| | ||| || |||| |||||||| || || | |||| || ||| | | ||
Sbjct 2336 ACGATCGACATTCAGATTGTCCTACAAAGCTCTAGAAT-GCAAGCCCTCAACCGT-TTTA 2393
Query 2353 AGTAAGGCTGATGCAGGTGTGCAGACCATT-CCCGG-AGCTGATGCAATATCAGAGGAGA 2410
||||||||||||| |||||| || | | || |||| ||||||| | || | || || |
Sbjct 2394 AGTAAGGCTGATGTAGGTGTTCA-AAC-TTATCCGGAAGCTGATACTGTAGCGGAAGACA 2451
Query 2411 ATACAAAAG-AGTTTCTGTGCTGTAAATGCAAATGCAGAGAACAATTTGATGCCC-AGCA 2468
| | |||| || | |||||| ||||||| |||||||||| | ||| |||||||| || |
Sbjct 2452 ACCCCAAAGAAG-TACTGTGCAGTAAATGTAAATGCAGAGCAGAATGTGATGCCCAAG-A 2509
Query 2469 AATGGGTGACA-TGCCAAATCTTCAGTTAGTACCTGTTGACAACTCGGAA-GTGGCAGAA 2526
||| |||||| | | |||||||||||||||||| |||||||||| ||| || |||||
Sbjct 2510 AATAAGTGACACT-TCTAATCTTCAGTTAGTACCTATTGACAACTCAGAAGGT-TCAGAA 2567
Query 2527 AAATCCAAGAAT-CAAGTTCCCAAAGCAGTAGAAAAGGTTCTAGCAGGTTCTATCAGGAG 2585
|| ||||| | |||||||| |||||||| ||||||||||||||||| |||||||| ||
Sbjct 2568 AAGTCCAA-TTTCCAAGTTCCTAAAGCAGTGGAAAAGGTTCTAGCAGGGTCTATCAGAAG 2626
Query 2586 GGAAATGGCTCTGGAAGAGTTCTGCACTAAACAAGCCTCTGAGATAACCCAACTTAACCG 2645
||||||||| |||| ||| |||||||||| ||||| ||||| ||| | || ||||| ||
Sbjct 2627 AGAAATGGCTATGGAGGAGGTCTGCACTAAGCAAGCATCTGAAATATCACAGCTTAATCG 2686
Query 2646 ACTGGTACAACAATACAAACATGAGAGAGAGTGCAATGCCATCATAGGACAAACAAGGGA 2705
||||| ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 2687 GCTGGTGCAACAGTACAAGCATGAGAGAGAATGCAATGCCATCATAGGACAAACAAGGGA 2746
Query 2706 GGACAAAATTATTCGCCTTGAAAGCCTTATGGATGGCGTATTATCTAAGGAGGATTTCCT 2765
|||||| ||| ||||||||||||| || ||||||||||| || ||||| || ||||||||
Sbjct 2747 GGACAAGATTGTTCGCCTTGAAAGTCTCATGGATGGCGTGTTGTCTAAAGATGATTTCCT 2806
Query 2766 TGATGAAGAATTTGCTTCTCTTC-TCCATGAACATAAGCTTCTAAAGGACATGTATCAGA 2824
|||||||||||||| || || | | ||||| ||||||||||| |||||||||||| |||
Sbjct 2807 GGATGAAGAATTTGCATCACT-CATGCATGAGCATAAGCTTCTGAAGGACATGTATGAGA 2865
Query 2825 ATCACCCTGAAGTGCTTA-AGACGAAGATTGAGTTGGAAA-GAACGCAAGAAGAGGTCGA 2882
| ||||| ||||| || |||||| |||||||||| ||| || |||||||||| ||||
Sbjct 2866 ACCACCCCGAAGTA-TTGCAGACGAGGATTGAGTTG-AAACGAGTGCAAGAAGAGCTCGA 2923
Query 2883 GAA-TTTCAAGAACTTTTATGGTGACATGGGAGAACGGGAAGTGTTATTGGAAGAGATTC 2941
|| |||||||||||| || ||||||||||||||| ||||||| ||||| ||||||||||
Sbjct 2924 -AAGTTTCAAGAACTTCTACGGTGACATGGGAGAAAGGGAAGTATTATTAGAAGAGATTC 2982
Query 2942 AGGATTTGAAGTTGCAGCTGCAATGTTACATTGACCCTTCTCTTAAATCAGCTCTGAAAA 3001
| ||||| ||| |||||| |||||||||| |||| ||||||||| ||| |||| |||||
Sbjct 2983 ACGATTTAAAGGCGCAGCTACAATGTTACACTGACTCTTCTCTTACATCTGCTCGGAAAA 3042
Query 3002 CGTG-TACCCTGCTTAAGCT----T----T-----C--ATACCAAGCTCCCCCAGTTAAC 3045
| | | ||||||||||||| | | | | |||||||| | ||| ||||
Sbjct 3043 -GAGGTTCCCTGCTTAAGCTAACATACGCTTGTGACCGAGACCAAGCTTCACCACTTAAT 3101
Query 3046 GCTATTCCTGAGTCACAGGACGAGAGTCTTGAGAAGACATTAGAACAGGAAAGACTTTGT 3105
| |||||||||||| ||||||| ||| |||||||||| ||||||||||||||||| ||
Sbjct 3102 ACCATTCCTGAGTCAGTGGACGAGTGTCCTGAGAAGACACTAGAACAGGAAAGACTTCGT 3161
Query 3106 TGGACAGAGGCAGAGACCAAATGGATTTCTCTCTCC-GAGGAATTAAGAACTGAGCTTGA 3164
| ||| || ||||||| ||| ||||| ||||| | | || ||||| ||||| ||||||||
Sbjct 3162 TAGACTGAAGCAGAGAGCAACTGGATCTCTCT-TGCTGAAGAATTGAGAACCGAGCTTGA 3220
Query 3165 -AGCCAGTA-AGGCGCTGATT-AATAAGCAGAAACATGAACTTGAAATTGAGAAAAGATG 3221
| ||| || | ||| || || |||||||||| |||||| || | |||||||||||
Sbjct 3221 TA-CCAATAGATT-GCTAATGGAA-AAGCAGAAACGTGAACTGGATACAGAGAAAAGATG 3277
Query 3222 CGGGGAGGAGTTGAAAGAAGCAATGCAGATGGCCATGGAAGGG-CATGCACGGATGCTTG 3280
| || ||||||| |||||||||||| ||||| ||| | ||| |||||||||||| |||
Sbjct 3278 TGCTGAAGAGTTGACAGAAGCAATGCAAATGGCGATGCA-GGGTCATGCACGGATGATTG 3336
Query 3281 AACAATATGCAGACCTGGAAGAGAAGCATATGCAATTGCTTGCAAGACATAGAAGGATTC 3340
|||| |||||||||||||||||||||||||| |||||||||||||| ||||| |||||||
Sbjct 3337 AACAGTATGCAGACCTGGAAGAGAAGCATATCCAATTGCTTGCAAGGCATAGGAGGATTC 3396
Query 3341 AAGACGGAATAGATGATGTCAAAAAGGCAGCTGCAAGAGCTGGAGTCAGAGGAGCAGAGT 3400
||| |||||||||||||| ||||| ||||| || ||||| ||||||| |||||| ||||
Sbjct 3397 GAGAAGGAATAGATGATGTAAAAAAAGCAGCAGCCAGAGCAGGAGTCAAAGGAGCTGAGT 3456
Query 3401 CCAGATTCATAAATGCACTTGCAGCAGAAATTTCAGCCTT-AAAGGTAGAAAA-AGAGAA 3458
| ||||||||||| ||||||||||| ||||||||||| || |||| | | ||| ||||||
Sbjct 3457 CTAGATTCATAAACGCACTTGCAGCTGAAATTTCAGCTTTGAAAG-T-GCAAAGAGAGAA 3514
Query 3459 GGAGAG-ACAATACCTGAGGGATGAGAACAAAAGTCTCCAAACACAACTAAGAGATACAG 3517
|||| | ||||||| | |||||||| ||||| |||||||| ||||||||||||||| |
Sbjct 3515 GGAG-GCACAATACTTCAGGGATGAAAACAAGAGTCTCCAGTTACAACTAAGAGATACTG 3573
Query 3518 CTGAAGCCATACAAGCAGCTGGAGAGTTACTTGTTCGGCTTAAAGAAGCCGAAGAGGGAT 3577
||||||| | |||||||| ||||||||||||||||| ||||||||||| ||||| ||||
Sbjct 3574 CTGAAGCTGTTCAAGCAGCAGGAGAGTTACTTGTTCGACTTAAAGAAGCTGAAGAAGGAT 3633
Query 3578 TAACAGTTGCACAGAAACGTGCGATGGATGCAGAGTATGAAGC-TGCAGAAGCATATAGA 3636
| ||| ||||||||||||| || |||||||||||||||||||| | |||||| ||||| |
Sbjct 3634 TGACATTTGCACAGAAACGGGCAATGGATGCAGAGTATGAAGCAT-CAGAAGTATATAAA 3692
Query 3637 CAGATTGACAAGCTGAAGAAGAAACATGAAAAC-GAAATCAACACACTTAACCAAC 3691
|||| |||||| |||||| |||| | |||| | |||| || ||| | |||||||
Sbjct 3693 AAGATGGACAAGTTGAAGAGGAAATACGAAA-CTGAAACCAGCACTGTAAACCAAC 3747
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 149375974025
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5