BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G14160.1
Length=2770
Score E
Sequences producing significant alignments: (Bits) Value
Ahg493493 jgi|Araly1|493493|fgenesh2_kg.7__2926__AT4G14160.1 4135 0.0
Ahg479878 jgi|Araly1|479878|fgenesh2_kg.3__2579__AT3G23660.1 2085 0.0
Ahg470552 jgi|Araly1|470552|fgenesh2_kg.1__506__AT1G05520.1 1166 0.0
> Ahg493493 jgi|Araly1|493493|fgenesh2_kg.7__2926__AT4G14160.1
Length=2706
Score = 4135 bits (2239), Expect = 0.0
Identities = 2488/2606 (95%), Gaps = 26/2606 (1%)
Strand=Plus/Plus
Query 154 GGAAGGTATTGATGGAGTTCGTATGACTTGGAACCTTTGGCCTCGCACTAAGGTTGAAGC 213
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 118 GGAAGGTATGGATGGAGTTCGTATGACTTGGAACCTTTGGCCTCGCACTAAGGTTGAAGC 177
Query 214 AAGCAAGTGTGTGATTCCTCTCGCCGCTTCAATTTCACCGATCCGTCGTCACCCCCTTAT 273
||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||
Sbjct 178 TAGCAAGTGTGTGATTCCTCTCGCCGCTTCAATTTCTCCGATCCGTCGTCACTCCGATAT 237
Query 274 CCTTGATCTCCCTTATGCTCCTCTCGATTGCAAGACTTGTAAAGCTCTTCTCAACGCCTT 333
|| |||||||||||||||||||||| | ||| ||||||| ||| |||||||||| ||
Sbjct 238 CCCTGATCTCCCTTATGCTCCTCTCAAGTGCCGGACTTGTGTTGCTGTTCTCAACGCTTT 297
Query 334 CGCTCGTGTTGATTTCGCCGCTATGAACTGGGTCTGTCCTTTTTGCTATCATAGGAATCA 393
|||||||||||||||| ||||| || |||| |||| ||||||||| |||| ||||||||
Sbjct 298 CGCTCGTGTTGATTTCAACGCTAAGATCTGGATCTGCCCTTTTTGCCATCAGAGGAATCA 357
Query 394 TTTCCC-TTCTCATTACCATTCGATCTCTGAGATTAATCTCCCTGGTGAGCTTTATCCCC 452
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 358 TTTCCCGGT-TCATTACCATTCGATCTCTGAGATTAATCTCCCTGGTGAGCTTTATCCTC 416
Query 453 AGTACACTACTGTTGAGTACACGTTGCCTCCTGAT-CCG-T-CTC-GTGTGCCTCCACCA 508
|||||||||||||||| ||||||||||| ||| | | | | || | |||||| ||
Sbjct 417 AGTACACTACTGTTGAATACACGTTGCCAACTGGTGCTGCTGATCAG-GTGCCT---CCG 472
Query 509 CCTGTGTTTGTGTTTGTTCTCGATACGTGCATGATTGAGGAAGAATTGGGATATGCCAAA 568
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 473 CCTGTGTTTGTGTTTGTTCTCGATACGTGTATGATTGAGGAAGAATTGGGATATGCCAAA 532
Query 569 TCGGCTCTTAAGCAGGCGATCGGGTTGCTTCCGGAGAATGCTTTGGTTGGGTTTGTGTCG 628
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 533 TCGGCGCTTAAGCAGGCGATCGGGTTGCTTCCGGAGAATGCTTTGGTTGGGTTTGTGTCG 592
Query 629 TTTGGTACTCAGGCTCATGTGCATGAATTGGGGTTCTCTGAGATGTCTAAAGTTTTTGTC 688
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTTGGTACTCAGGCTCATGTTCATGAATTGGGGTTCTCTGAGATGTCTAAAGTTTTTGTC 652
Query 689 TTTAAAGGCAATAAAGAAGTTACCAAGGATCAAATTTTGGATCAGTTGGGGCTTGGGTCT 748
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 653 TTTAAAGGCAATAAAGAAGTCACCAAGGATCAAATTTTGGATCAGTTGGGGCTTGGGTCT 712
Query 749 TCTTCGAGGAGAGCTCCTACTTCTGGGTTTTCTAAAGGAGCGCAAAACGGATTCCAGAGT 808
|| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 713 TCCTCAAGGAGAGCTCCTACTTCTGGGTTTCCTAAAGGAGCGCAAAACGGATTCCAGAGT 772
Query 809 TCCGGTGTTGACAGATTCCTGCTGCCCGCTTCGGAGTGTGAATACACACTGGACTTGCTT 868
||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct 773 TCCGGTGTTGACAGATTCCTGTTGCCCGCTTCGGAGTGCGAATACACACTGGACTTGCTT 832
Query 869 TTGGATGAGCTCCAATCAGACCAGTGGCCTGTTCAGCCAGGTCATCGTCCCCAACGATGC 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 833 TTGGATGAGCTCCAATCAGACCAGTGGCCTGTTCAGCCAGGTCATCGTCCCCAACGATGC 892
Query 929 ACAGGGGTTGCATTGAGTGTAGCTGCAGGATTGCTTGGAGCTTGCTTACCTGGAACTGGT 988
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 893 ACAGGGGTTGCATTGAGTGTAGCTGCAGGATTGCTTGGAGCTTGCTTACCTGGAACTGGG 952
Query 989 GCTAGAATTGTAGCTTTGGTTGGAGGTCCATGTACAGAGGGCCCTGGAACGATTATCTCA 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 953 GCTAGAATTGTAGCTTTGGTTGGAGGTCCATGTACAGAGGGCCCTGGAACGATTATCTCA 1012
Query 1049 AAGGATTTGTCAGATCCTGTGCGCTCCCACAAAGATCTAGATAAAGATGCTGCTCCTTAT 1108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1013 AAGGATTTGTCAGATCCTGTGCGCTCCCACAAAGATCTAGATAAAGATGCTGCTCCTTAT 1072
Query 1109 TATAAAAAAGCTGTAAAGTTTTATGATAGTATTGCAAAGCAGCTTGTCGCTCAGGGTCAT 1168
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1073 TATAAAAAAGCTGTCAAGTTTTATGATAGTATTGCAAAGCAGCTTGTCGCTCAGGGTCAT 1132
Query 1169 GTGTTAGACCTTTTCGCTTCTGCACTTGATCAGGTCGGGGTTGCTGAAATGAAAGTAGCC 1228
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1133 GTGTTAGACCTTTTCGCCTCTGCACTTGATCAGGTTGGGGTTGCTGAAATGAAAGTAGCC 1192
Query 1229 GTTGAAAGTACCGGTGGTCTCGTTGTTCTGTCTGAAAGTTTTGGCCATTCTGTATTTAAA 1288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1193 GTTGAAAGTACCGGTGGTCTCGTTGTTCTGTCTGAAAGTTTTGGCCATTCTGTATTTAAA 1252
Query 1289 GATTCCTTTAAGAGGATGTTTGAAGATGGCGAGCACTCTCTTGGTCTCTGCTTCAATGGC 1348
|||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1253 GATTCCTTCAAGAGGGTGTTTGAAGATGGCGAGCAGTCTCTTGGTCTCTGCTTCAATGGC 1312
Query 1349 ACGCTTGAGATAAATTGTTCAAAAGACATCAAAATTCAAGGGGTTATCGGGCCTTGCTCA 1408
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1313 ACGCTTGAGATCAATTGTTCAAAAGACATCAAAATTCAAGGGGTTATCGGGCCTTGCTCA 1372
Query 1409 TCATTAGAAAAGAAAGGTCCCAATGTTGCTGACACAGTCATTGGAGAGGGGAATACCAGT 1468
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1373 TCATTAGAAAAGAAAGGTCCCAATGTTGCCGACACAGTCATTGGAGAGGGGAATACCAGT 1432
Query 1469 GCTTGGAAATTGTGTGGCCTCGACAAGAGTACCTGCTTGACTGTATTCTTTGATCTATCT 1528
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1433 GCTTGGAAGTTGTGTGGCCTCGACAAGAGTACCTGCTTGACTGTATTCTTTGATCTATCT 1492
Query 1529 TCAACCGGGTCAACTGCTCCTGGAGCTTTAAATCAGCAGTTGTATTTGCAGTTTATCACA 1588
||||||||||||| ||||||||||||| |||||| |||||||||||||||||| |||||
Sbjct 1493 TCAACCGGGTCAAATGCTCCTGGAGCTGTAAATCCTCAGTTGTATTTGCAGTTTGTCACA 1552
Query 1589 AGATACCAAAACTCTGAAGGTAAAAGTTTGGC-CCGGGTTACAACTTTAACCAGACAGTG 1647
|| ||||||||| |||||||||||||||| || ||||||||||||| |||||||||||||
Sbjct 1553 AGTTACCAAAACCCTGAAGGTAAAAGTTT-GCTCCGGGTTACAACTGTAACCAGACAGTG 1611
Query 1648 GGTAGATACTGCTGTGAGCACAGAGGTAAATCTTGTGCAAGGCTTTGACCAAGAAACTGC 1707
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1612 GGTGGATACTGCTGTGAGCACAGAGGTAAAACTTGTGCAAGGCTTTGACCAAGAAACTGC 1671
Query 1708 TGCAGTGGTTATGGCAAGATTAACTTCCTTAAAAATGGAAACAGAGGAGGGATTTGATGC 1767
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1672 TGCTGTGGTTATGGCAAGATTAACTTCCTTAAAAATGGAAACAGAGGAGGGATTTGATGC 1731
Query 1768 AACTCGGTGGCTAGATCGGACTCTCATTCGTCTGTGTTCAAAATTTGGTGAATATAGAAA 1827
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1732 TACTCGGTGGCTAGATCGGACTCTCATTCGTCTGTGTTCAAAATTTGGTGAATATAGAAA 1791
Query 1828 GGATGATCCAACCTCGTTTACGCTGAAACCATATCTTACATTGTTCCCTCAATTCATGTT 1887
||||||||||||||||||||||||||| || ||| || ||||||||||||||||||||||
Sbjct 1792 GGATGATCCAACCTCGTTTACGCTGAATCCCTATTTTTCATTGTTCCCTCAATTCATGTT 1851
Query 1888 TAACCTGAGGCGGTCACAGTTTGTTCAGGTCTTTAACAATAGTCCTGATGAAACCGCATA 1947
|||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1852 TAACTTGCGGCGGTCACAGTTTGTTCAGGTCTTTAACAACAGTCCTGATGAAACCGCATA 1911
Query 1948 CTTCCGCATGTTGCTAAACCGGGAAAACATTTCAAATGCAATTGTCATGATCCAACCTTC 2007
|||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| ||
Sbjct 1912 CTTCCGCATGCTGCTAAACCGGGAAAATATTTCAAATGCAACTGTCATGATCCAACCATC 1971
Query 2008 TCTGACGTCATATTCATTCAATTCAGGACCTCAGGCAGCTTTGCTGGATGTGGCTTCCAT 2067
|||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||
Sbjct 1972 TCTGACGTCATATTCATTCAATGCACCACCTCAGCCAGCTTTGCTGGATGTGGCTTCCAT 2031
Query 2068 TGCAGCTGACAAGATTCTTCTATTAGATGCATATTTTAGTGTTGTTGTCTTCCATGGAAT 2127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2032 TGCAGCTGACAAGATTCTTCTATTAGATGCATATTTTAGTGTTGTTGTCTTCCATGGAAT 2091
Query 2128 GACTATATCGCAATGGCGAAACATGGGTTATCATCATCAGCCTGAACATGAGGCCTTTGC 2187
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2092 GACTATAGCGCAATGGCGAAACATGGGTTATCATCATCAGCCTGAACATGAGGCCTTTGC 2151
Query 2188 TCAGTTATTGCAAGCTCCGCAAGAGGATTCCCAGATGTTAGTCCGGGAGCGTTTCCCAGT 2247
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2152 TCAGTTATTGCAAGCTCCTCAAGAGGATTCCCAGATGTTAGTCCGGGAGCGTTTCCCAGT 2211
Query 2248 CCCGAGATTAGTTGTGTGTGATCAACATGGATCACAGGCAAGGTTTTTATTGGCTAAGCT 2307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2212 CCCGAGATTAGTTGTGTGTGATCAACATGGATCACAGGCAAGGTTTTTATTGGCTAAGCT 2271
Query 2308 GAATCCATCAGCGACTTACAACAATGCAAACGAGATGTCAGCTGGGTCAGACATAATCTT 2367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2272 GAATCCATCAGCGACTTACAACAATGCAAACGAGATGTCAGCTGGGTCAGACATAATCTT 2331
Query 2368 CACTGACGATGTGAGCCTGCAAGTCTTTATTGAACATCTT-CAGAAACTGGCCGTGCAAT 2426
|||||||||||||||||||||||||||| |||| |||||| | |||||||||||||||||
Sbjct 2332 CACTGACGATGTGAGCCTGCAAGTCTTTTTTGAGCATCTTTC-GAAACTGGCCGTGCAAT 2390
Query 2427 CCTGAGCAAAGTAGTCACAGTCCCAGTTTGTTTTTTGCTTAAATTATCTATATCTTCCTG 2486
|||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct 2391 CCTGAGCAAAGTAGTCACAGTCCCAGTTC-TTTTTTGCTTAAATTATCCATATCTTCCTG 2449
Query 2487 ATTACCCGCATGCCCGTTTGTACTATTTTAGAGCTCTTTGTTATTTTGGTCTCACATAAA 2546
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2450 ATTACCCGCATGCCCGTTTGTACCATTTTAGAGCTCTTTGTTATTTTGGTCTCACATAAG 2509
Query 2547 ATACATCATAGTTGGAAGTCTTTTATTTGCATTGGGATTTGTCTGGAGTACAGAGATTTA 2606
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2510 ATACATCATAGTTG-AAGTCTTTTATTTGCATTGGGATTTGTCTGGAGTACAGAGATTTA 2568
Query 2607 CTATTTGCTTCTTCTTTCttttttt-tttGGGATGAAATCTCTTGTATGATTGAT-CAAT 2664
||||||||||||| ||| ||||||| ||||||||||||||||||||||||| || ||||
Sbjct 2569 CTATTTGCTTCTTTTTT-TTTTTTTGTTTGGGATGAAATCTCTTGTATGATCAATTCAAT 2627
Query 2665 TATATGGTTTGGGTCTGTGGCTTTAGTACTTTTGGTCCTTGGACAACTTCTCTGCTTCTG 2724
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct 2628 TATATGGTTTGGGTCTGTGGCTTTAGTACTTTTGG-------ACATCTTCTCTGCTTCTG 2680
Query 2725 ATCCAGTATGTTGCGCTACTGCGTTT 2750
||||||||||||||| ||||||||||
Sbjct 2681 ATCCAGTATGTTGCGTTACTGCGTTT 2706
> Ahg479878 jgi|Araly1|479878|fgenesh2_kg.3__2579__AT3G23660.1
Length=2499
Score = 2085 bits (1129), Expect = 0.0
Identities = 1933/2313 (84%), Gaps = 88/2313 (4%)
Strand=Plus/Plus
Query 167 GGAGTTCGTATGACTTGGAACCTTTGGCCTCGCACTAAGGTTGAAGCAAGCAAGTGTGTG 226
|||||||||||||| |||||| |||||||||| |||| |||||||| ||||| || |||
Sbjct 67 GGAGTTCGTATGACATGGAACGTTTGGCCTCGTTCTAAAGTTGAAGCTAGCAAATGCGTG 126
Query 227 ATTCCTCTCGCCGCTT-CAATTTCACCGATCCGTCGTCACCCCCTTATCCTTGA-TCTCC 284
|| || |||||||||| | ||||| |||||||| || || || ||||| | | || |
Sbjct 127 ATCCCACTCGCCGCTTGC-ATTTCTCCGATCCGGCGACATTCCGATATCCCT-ACCCTTC 184
Query 285 CTTATGCTCCTCT-CGATTGCAAGACTTGTAAAGC-TCTTCTCAACGCCTT-CGCTCGTG 341
|||| || || || ||| ||| ||||||| || | | | |||| ||| ||| | |
Sbjct 185 CTTACGCACCGCTCCGA-TGCCGGACTTGTTCCGCAGCGT-TAAACG-CTTACGCACAAG 241
Query 342 TTGATTTCGCCGCTATGAACTGGGTCTGTCCTTTTTGCTATCATAGGAATCATTTCCCTT 401
| |||||| |||| | | ||| ||||||| ||||| ||||| | |||||||||||
Sbjct 242 TCGATTTCACCGCAAAGCTTTGGATCTGTCCCTTTTGTTATCAGCGTAATCATTTCCCGC 301
Query 402 CTCATTACCAT-TCGATCTCTGAGATTAATCTCCCTGGTGAGCTTTATCCCCAGTACACT 460
||||||| ||| | ||||||||||| |||||| ||||||||||||||||| ||||| |||
Sbjct 302 CTCATTATCATGT-GATCTCTGAGACTAATCTTCCTGGTGAGCTTTATCCTCAGTATACT 360
Query 461 ACTGTTGAGTACACG-TTGCCT---CCTGAT-C-CGTC-------T-C---G--T-GTG- 499
|||||||| |||||| || ||| |||| | | ||| | | | | | |
Sbjct 361 ACTGTTGAATACACGCTT-CCTCCGCCTGTTGCTGGTCAATTTGATCCGAGGAATGGGGA 419
Query 500 -CCTCC-AC-CA-CCTGTGTTTGTGTTTGTTCTCGATACGTGCATGATTGAGGAAGAATT 555
||| | || | ||||||||||||||||| ||||| || |||||||| ||||||||
Sbjct 420 AGTTCCGTCGCAGGCGGTGTTTGTGTTTGTTCTTGATACTTGTATGATTGAAGAAGAATT 479
Query 556 GGGA-TATGCCAAATCGGCTCTTAAGCAGGCGATCGGGTTGCTTCCGGAGAATGCTTTGG 614
|| | ||| |||||||| ||||| |||||||| || ||||||||||||||||||||||
Sbjct 480 -AGATTTTGCTAAATCGGCGCTTAAACAGGCGATTGGATTGCTTCCGGAGAATGCTTTGG 538
Query 615 TTGGGTTTGTGTCGTTTGGTACTCAGGCTCATGTGCATGAATTGGGGTTCTCTGAGATGT 674
|||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 539 TTGGATTTGTGTCGTTTGGTACTCAGGCTCATGCGCATGAATTGGGATTCTCTGAGATGT 598
Query 675 CTAAAGTTTTTGTCTTTAAAGGCA-ATAAAGAAG-TTACCAAGGATCAAATTTTGGATCA 732
|||| |||||||| |||||||| | |||||| || || | || ||||| |||||||||||
Sbjct 599 CTAAGGTTTTTGTTTTTAAAGG-AGATAAAG-AGATTTCTAAAGATCAGATTTTGGATCA 656
Query 733 GTTGGGGCTTGG-GTCTTCTTCGAGGAGAGCTCCTACTTCTGGGTTTTCTAAAGGAGCGC 791
|||||||||||| | |||||| |||||| || | | | |||||||| |
Sbjct 657 GTTGGGGCTTGGAG-GTTCTTCAAGGAGA-----TA-TAC---G------AAAGGAGCTC 700
Query 792 AAAACGGATTCCAGAGTTCCGGTGTTG-ACAGATTCCTGCTGCCCGCTTCGGAGTGTGAA 850
|||| || ||| |||||| ||| ||| | |||||| || |||| ||||||||||| |||
Sbjct 701 AAAATGGCGTCCCGAGTTCTGGT-TTGAATAGATTCTTGTTGCCTGCTTCGGAGTGCGAA 759
Query 851 TACACACTGGACTTGCTTTTGGATGAGCTCCAATCAGACCAGTGGCCTGTTCAGCCAGGT 910
| |||||| ||| ||||||||||||||| ||| || |||||||||||||||||||||
Sbjct 760 TTCACACTCAACTCGCTTTTGGATGAGCTACAAAGTGATCAGTGGCCTGTTCAGCCAGGT 819
Query 911 CATC-GTCCCCAACGATGCACAGGGGTTGCATTGAGTGTAGCTGCAGGATTGCTTGGAGC 969
|||| || |||||||||||||||| || ||||||||||| ||||||||||||||||||||
Sbjct 820 CATCGGT-CCCAACGATGCACAGGTGTGGCATTGAGTGTTGCTGCAGGATTGCTTGGAGC 878
Query 970 TTGCTTACCTGGAACTGGTGCTAGAATTGTAGCTTTGGTTGGAGGTCCATGTACAGAGGG 1029
|||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||| ||
Sbjct 879 TTGCTTGCCTGGAACTGGGGCTAGAATTGTAGCTTTGATCGGAGGTCCATGTACAGAAGG 938
Query 1030 CCCTGGAACGATTATCTCAAAGGATTTGTCAGATCCTGTGCGCTCCCACAAAGATCTAGA 1089
||||||||||||| ||||||| ||||| || ||||||||||| || ||||||||||||||
Sbjct 939 CCCTGGAACGATTGTCTCAAAAGATTTATCGGATCCTGTGCGATCTCACAAAGATCTAGA 998
Query 1090 TAAAGATGCTGCTCCTTATTATAAAAAAGCTGTAAAGTTTTATGATAGTATTGCAAAGCA 1149
||||||||| |||||||| |||||||| ||||| |||||||||||||| || ||||||||
Sbjct 999 TAAAGATGCCGCTCCTTACTATAAAAAGGCTGTCAAGTTTTATGATAGCATCGCAAAGCA 1058
Query 1150 GCTTGTCGCTCAGGGTCATGTGTTAGACCTTTTCGCTTCTGCACTTGATCAGGTCGGGGT 1209
|| ||| |||||||||||||| |||||||||| |||||||||||||||||||| |||||
Sbjct 1059 ACTAGTCACTCAGGGTCATGTGCTAGACCTTTTTGCTTCTGCACTTGATCAGGTTGGGGT 1118
Query 1210 TGCTGAAATGAAAGTAGCCGTTGAAAGTA-CCGGTGGTCTCGTTGTTCTGTCTGAAAGTT 1268
|||||| |||||||| || |||||||| | | ||||| || |||||||||||||||||||
Sbjct 1119 TGCTGAGATGAAAGTTGCAGTTGAAAG-ATCTGGTGGCCTTGTTGTTCTGTCTGAAAGTT 1177
Query 1269 TTGGCCATTCTGTATTTAAAGATTCCTTTAAGAGGA-TGTTTGAAGATGGCGAGCACTCT 1327
|||||||||| ||||| ||||||||||| ||| || | |||||||||||||| || ||
Sbjct 1178 TTGGCCATTCCGTATTCAAAGATTCCTTCAAG-CGAGTATTTGAAGATGGCGACCAGGCT 1236
Query 1328 CTTGGTCTCTGCTTCAATGGCACGCTTGAGATAAATTGTTCAAAAGACATCAAAATTCAA 1387
||||| |||||||| ||||| ||||||||||| ||||||| | |||||||||||||||
Sbjct 1237 CTTGGCCTCTGCTTTAATGGGACGCTTGAGATCTGTTGTTCACAGGACATCAAAATTCAA 1296
Query 1388 GGGGTTATCGGGCCTTGCTCATCATTAGAAAAGAAAGGTCCCAATGTTGCTGACACAGTC 1447
|||| ||| | || |||||||||||||| |||||||| | | ||||||||| || ||
Sbjct 1297 GGGGCTATTGAACCATGCTCATCATTAGAGAAGAAAGGGGCTAGTGTTGCTGATACGGTT 1356
Query 1448 ATTGGAGAGGGGAATACCAGTGCTTGGAAATTGTGTGGCCTCGACAAGAGTACCTGCTTG 1507
|| ||||| |||||||| |||||||| ||||||||||| || || | ||| || |||
Sbjct 1357 ATCGGAGAAGGGAATACTTCTGCTTGGAGGTTGTGTGGCCTTGATAAAACTACGTGTTTG 1416
Query 1508 ACTGTATTCTTTGATC-TATCTTCAACCGGGTCAACTGCTCCTGGAGCTTTAAAT-CAGC 1565
|| ||||| ||||| | ||||||||| |||||||| | ||||||||||| ||| || |
Sbjct 1417 ACAGTATTTTTTGA-CATATCTTCAAGCGGGTCAAATACTCCTGGAGCTGCGAATCCA-C 1474
Query 1566 AGTTGTATTTGCAGTTTATCACAAGATACCAAAACTCTGAAGGTAAAAGTTTGGC-CCGG 1624
|||| |||||||||||| |||||| ||||||||| |||||||| ||| || || |||
Sbjct 1475 AGTTTTATTTGCAGTTTCTCACAATTTACCAAAACCCTGAAGGTCAAACATT-GCTCCGA 1533
Query 1625 GTTACAACTTTAACCAGACAGTGGGTAGATACTGCTGTGAGCACAGAGGTAAATCTTGTG 1684
||||| ||| || |||||||||| |||| | ||||||||| |||||| || ||||||
Sbjct 1534 GTTACTACTGTATGCAGACAGTGGATAGACAGTGCTGTGAGTTCAGAGG--AA-CTTGTG 1590
Query 1685 CAAGGCTTTGACCAAGAAACTGCTGCAGTGGTTATGGCAAGATTAACTTCCTTAAAAATG 1744
||||||||||| |||||||||||||| ||||| ||||| |||||| |||| |||||||||
Sbjct 1591 CAAGGCTTTGATCAAGAAACTGCTGCTGTGGTCATGGCTAGATTAGCTTCTTTAAAAATG 1650
Query 1745 GAAACAGAGGAGGGATTTGATGCAACTCGGTGGCTAGATCGGACTCTCATTCGTCTGTGT 1804
|| ||||||||||||||||||| ||||||||| ||||||||| |||||||||||| |||
Sbjct 1651 GAGTCAGAGGAGGGATTTGATGCTACTCGGTGGTTAGATCGGAATCTCATTCGTCTTTGT 1710
Query 1805 TCAAAATTTGGTGAATATAGAAAGGATGATCCAACCTCGTTTACGCTGAAACCATATCTT 1864
||||| ||||| || |||||||||||||||||| |||| || |||||||| || ||| ||
Sbjct 1711 TCAAAGTTTGGAGACTATAGAAAGGATGATCCAGCCTCATTCACGCTGAATCCCTATTTT 1770
Query 1865 ACATTGTTCCCTCAATTCATGTTTAACCTGAGGCGGTCACAGTTTGTTCAGGTCTTTAAC 1924
| || || |||||||| || ||||| ||| |||| || |||||||||||||| ||||||
Sbjct 1771 TCGTTATTTCCTCAATTTATATTTAATCTGCGGCGATCCCAGTTTGTTCAGGTATTTAAC 1830
Query 1925 AATAGTCCTGATGAAACCGCATACTTCCGCATGTTGCTAAACCGGGAAAACATTTCAAAT 1984
||||| ||||||||||||||||||||| ||||||| |||||||||| || ||||| |||
Sbjct 1831 AATAGCCCTGATGAAACCGCATACTTCTGCATGTTATTAAACCGGGAGAATATTTCGAAT 1890
Query 1985 GCAATTGTCATGATCCAACCTTC-TCTGACGTCATATTCATTCAATTCAGGA-CCTCAGG 2042
|||| ||||||||||||||| || | |||| ||||||||||||||||| | || |
Sbjct 1891 GCAACTGTCATGATCCAACCGTCAT-TGACAACATATTCATTCAATTCACCAGCC-GAAC 1948
Query 2043 CAGCTTTGCTGGATGTGGCTTCCATTGCAGCTGA-CAAGATTCTTCTATTAGATGCATAT 2101
|||||||||| |||||||||||||||||||| || | | |||||| ||||||||||||||
Sbjct 1949 CAGCTTTGCTAGATGTGGCTTCCATTGCAGCCGATCGA-ATTCTTTTATTAGATGCATAT 2007
Query 2102 TTTAGTGTTGTTGTCTTCCATGGAATGACTATATCGCAATGGCGAAACATGGGTTATCAT 2161
||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||
Sbjct 2008 TTTAGTGTTGTTGTCTTCCATGGAATGACTATAGCACAATGGCGAAATATGGGTTATCAT 2067
Query 2162 CATCAGCCTGAACATGAGGCCTTTGCTCAGTTATTGCAAGCTCCGCAAGAGGATTCCCAG 2221
|||||||||||||| |||| |||||| |||||||||||||||| |||||||||||||||
Sbjct 2068 CATCAGCCTGAACACCAGGCTTTTGCTGAGTTATTGCAAGCTCCTCAAGAGGATTCCCAG 2127
Query 2222 ATGTTAGTCCGGGAGCGTTTCCCAGTCCCGAGATTAGTTGTGTGTGATCAACATGGATCA 2281
||| ||||||| ||||||||||| ||||| ||||||||||| |||||||| || || ||
Sbjct 2128 ATGCTAGTCCGTGAGCGTTTCCCTGTCCCAAGATTAGTTGTCTGTGATCAGCACGGCTCG 2187
Query 2282 CAGGCAAGGTTTTTATTGGCTAAGCTGAATCCATCAGCGACTTACAACAATGCAAACGAG 2341
|||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 2188 CAGGCAAGGTTTTTATTGGCAAAGCTGAATCCATCAGCGACGTACAACAATGCAAACGAA 2247
Query 2342 ATGTC-AGCTGGGTCAGACATAATCTTCACTGACGATGTGAGCCTGCAAGTCTT-TATTG 2399
||||| | | |||||||| | || ||||| ||||| || ||||| |||||||| | |||
Sbjct 2248 ATGTCGA-CAGGGTCAGATGTGATATTCACAGACGACGTTAGCCTTCAAGTCTTCT-TTG 2305
Query 2400 AACATCTTCAGAAACTGGCCGTGCAATCCTGAG 2432
||||||||||||| |||| ||||| || ||||
Sbjct 2306 AACATCTTCAGAAGCTGGTAGTGCAGTCTTGAG 2338
> Ahg470552 jgi|Araly1|470552|fgenesh2_kg.1__506__AT1G05520.1
Length=2541
Score = 1166 bits (631), Expect = 0.0
Identities = 1542/1973 (78%), Gaps = 98/1973 (5%)
Strand=Plus/Plus
Query 512 GTGTTTGTGTTTGTTC-TCGATACGTGCATGATTGAGGAAGAATTGGGATATGCCAAATC 570
|||||||| |||| || | |||||||| ||||||||||| || || ||||| || |||||
Sbjct 433 GTGTTTGTTTTTG-TCTTGGATACGTGTATGATTGAGGAGGAGTTTGGATACGCGAAATC 491
Query 571 GGCTCTTAAGCAGGCGATCGGGTTGCTTCCGGAGAATGCTTTGGTTGGGTTTGTGTCGTT 630
|| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 492 TGCGCTTAAGCAGGCGATCGGGTTGCTTCCGGAGAATGCATTGGTTGGGTTTGTCTCGTT 551
Query 631 TGGTACTCAGGCTCATGTGCATGAATTGGGGTTCTCTGAGATGTCTAAAGTTTTTGTCTT 690
||| || ||||| ||||| || || ||||| || ||||| || ||||||||| ||||||
Sbjct 552 TGGGACGCAGGCGCATGTTCACGAGTTGGGTTTTTCTGATTTGACTAAAGTTTATGTCTT 611
Query 691 TAAAGGCA-ATAAAGAAG-T-TACCAAGGATCAAATTTTGGATCAGTTGGGGCTTGGGT- 746
| | || | || ||| || | | |||| ||||| |||||||| ||||| |||||| |||
Sbjct 612 T-AGGGGAGAT-AAGGAGATCT-CCAAAGATCAGATTTTGGAGCAGTTAGGGCTT-GGTG 667
Query 747 CTTCTTCGAGGA-GAGCTCCTACTTCTG-GGTTTTCTAA--AGGAGCGCA-AA--ACGG- 798
||||| || || || | || || | || |||| || |||| | | || |||
Sbjct 668 CTTCTGGGA-GACGAAC-CCCGGTT-GGTGGCTTTCCAATGGGGAG-GGATAATTCCGGC 723
Query 799 -ATTCCAG--AGTTCCGGTGTTGACAGATTCCTGCTGCCCGCTTCGGAGTGTGAATACAC 855
||||| | | ||| |||||| | |||||| || |||| ||||| |||||||||| |||
Sbjct 724 AATTCCGGCTA-TTCGGGTGTTAATAGATTCTTGTTGCCAGCTTCTGAGTGTGAATTCAC 782
Query 856 -ACTGGACTT-GCTTTTGGATGAGCTCCA-ATCAGACCAGTGGCCTGTTC-AGCCAGGTC 911
| | || || ||| ||||| ||||| || | | || ||||||||||| | || | ||
Sbjct 783 GA-TTGA-TTCGCTGTTGGAAGAGCTACAGA-CGGATCAGTGGCCTGTCCAAG-CTGG-- 836
Query 912 ATCGTCCCCA---ACGATGCACAGGG-GTTGCATTGAGTGTAGCTGCAGGATTGCTTGGA 967
| |||| ||| || ||||| ||| || || || ||||| ||| | ||| ||||||||
Sbjct 837 A-CGTCGCCAGTCTCGGTGCAC-GGGAGTGGCTTTAAGTGTGGCTACGGGACTGCTTGGA 894
Query 968 GCTTGCTTACCTGGAACTGGTGCTAGAATTGTAGCTTTGGTTGGAGGTCCATGTACAGAG 1027
||||| || ||||||||||| |||||||| || ||||| ||||||| |||||| | |||
Sbjct 895 GCTTGTTTTCCTGGAACTGGGGCTAGAATCGTTGCTTTAATTGGAGGACCATGTTCTGAG 954
Query 1028 GGCCCTGGAACGATTATCTCAAAGGATTTGTCAGATCCTGTGCGCTCCCACAAAGATCTA 1087
|| || || |||||| | ||||||||| | ||||| ||| |||| || || ||||||||
Sbjct 955 GGGCCAGGCACGATTGTGTCAAAGGATCTATCAGAACCTTTGCGTTCACATAAAGATCTC 1014
Query 1088 GATAAAGATGCTGCTCCTTAT-TATAAAAAAGCTGTA-AAGTTTTATGATAG-TATTGCA 1144
||||||||||| ||||||| | ||||| ||||| | | || ||||||||| | | | |||
Sbjct 1015 GATAAAGATGCGGCTCCTT-TCTATAAGAAAGC-GGAGAAATTTTATGAT-GCTCTCGCA 1071
Query 1145 AAGCAGCTTGTCG--CTCAGGGTCATGTGTTAGACCTTTTCGCTTCTGCACTTGATCAGG 1202
|| || || || | | || || ||||| | |||||||| || || |||||||||||||
Sbjct 1072 AACCAACTGGT-GAAC-CAAGGACATGTACTGGACCTTTTTGCATCCGCACTTGATCAGG 1129
Query 1203 TCGGGGTTGCTGAAATGAAAG-TAGCCGTTGAAAGTACCGGTGGTCTCGTTGTTCTGTCT 1261
| || |||||||||||||||| | || |||||||| || || || || |||||| | ||
Sbjct 1130 TTGGTGTTGCTGAAATGAAAGCT-GCGGTTGAAAGAACTGGAGGACTTGTTGTTTTATCA 1188
Query 1262 GAAAGTTTTGGCCATTCTGTATTTAAAGATTCCTTTAAGAGGA-TGTTTGAAGATGGCG- 1319
|||||||||||||||||||||||||| ||||| |||||| || | |||||||||||||
Sbjct 1189 GAAAGTTTTGGCCATTCTGTATTTAAGGATTCTTTTAAG-CGAGTATTTGAAGATGGCGA 1247
Query 1320 AGCACTCTCTTGGTCTCTGCTTCAATGGCACGCTTGAGATAAATTGTTCAAAAGACATCA 1379
|| | ||||| || || || |||||||| || |||||||| |||||||| ||||| |
Sbjct 1248 AG-AGTCTCTCGGCCTTTGTTTCAATGGTACACTTGAGATCTGCTGTTCAAAGGACATAA 1306
Query 1380 AAATTCAAGGGGTTATCGGGCCTTGCT-CATCATTAG-AAAAGAAAGGTCCC-AATGTTG 1436
|||| |||||| |||| |||||||| | | ||||| | |||||||||| ||| | ||||
Sbjct 1307 AAATCCAAGGGATTATTGGGCCTTG-TGCGTCATT-GCAAAAGAAAGG-CCCTAGCGTTG 1363
Query 1437 CTGACACAGTCATTGGAGAGGGGAATACCAGTGCTTGGAA-ATTGTGTGGCCTCGACAAG 1495
|||| ||||| ||||| ||||||||||| | | ||||| | ||||||||||||| ||
Sbjct 1364 CTGATACAGTTATTGGGGAGGGGAATACTACAGAATGGAAGA-TGTGTGGCCTCGATAAA 1422
Query 1496 AGTACCTGCTTGACTGTATTCTTTGATCTATCTTC-A---ACCGGGTCAACTGCTCCTGG 1551
||||| || ||||| || ||||||||||| ||||| | | | |||| | |||||||
Sbjct 1423 AGTACTTGTTTGACAGTCTTCTTTGATCTTTCTTCTAGTGATC-AATCAAGTACTCCTGG 1481
Query 1552 AGCTTTAAATCAGCAGTTGTATTTGCAGTTTATCACAAGATACCAAAACTCTGAAGGTAA 1611
|| | |||| | || | ||||| || ||||| ||||| |||||||| || |||||||
Sbjct 1482 AGGTGGAAATAACCAACTATATTTACAATTTATGACAAGCTACCAAAATTCAAAAGGTAA 1541
Query 1612 AAGTTTGGC-CCGGGTTACAACT-TTAACCAGACAGTGGGTAGATACTGCTGTGAGCACA 1669
|| || | || || || ||| || |||||||| ||||||||||||||| | ||||||
Sbjct 1542 AACATT-ACAGCGAGTAACTACTGTT-ACCAGACAATGGGTAGATACTGCTCTTAGCACA 1599
Query 1670 GAGGTAAATCTTGTGCAAGGCTTTGACCAAGAAACTGCTGCAGTGGTTATGGCAAGATTA 1729
|||| ||| | |||||||| ||||| |||||||||||||| |||||| |||| |||||
Sbjct 1600 GAGG--AAT-TGGTGCAAGGTTTTGATCAAGAAACTGCTGCTGTGGTTGTGGCCAGATTG 1656
Query 1730 ACTTCCTTAAAAATGGAAACAGAGGAGGGATTTGATGCAACTCGGTGGCTAGATCGGA-C 1788
| ||||| ||||||||||||||||||||||||||||| || || ||||| || |||| |
Sbjct 1657 GCCTCCTTGAAAATGGAAACAGAGGAGGGATTTGATGCTACGCGATGGCTGGACCGGAAC 1716
Query 1789 TCTCATTCGTCTGTGTTCAAAATTTGGTGAATATAGAAAGGATGATCCAACCTCGTTTAC 1848
|| |||||||| ||||| ||||||||||| || | ||||||||||| | || |||||
Sbjct 1717 -CTTATTCGTCTTTGTTCTAAATTTGGTGATTACCGGAAGGATGATCCTGCTTCATTTAC 1775
Query 1849 GCTGAAA-CCATA-TCTTACATTGTTCCCTCAATTCATGTTTAACCTGAGGCGGTCACAG 1906
|| ||| ||| | | || || | |||||||| || | |||||| || | || |||||
Sbjct 1776 TCT-AAATCCAAACTTTT-CACTATTCCCTCAGTTTACGTTTAATCTCCGACGCTCACAA 1833
Query 1907 TTTGTTCAGGTCTTTAACAATAGTCCTGATGAAACCGCATACTTCCGCATGTTGCTAAAC 1966
||||| ||||| || ||||||||||| |||||||| || ||| ||||||| | | |||
Sbjct 1834 TTTGTGCAGGTATTCAACAATAGTCCAGATGAAACTGCTTACAGCCGCATGCTATTGAAC 1893
Query 1967 CGGGAAAACATTTCAAATGCAATTGTCATGATCCAACCTTCTCTGACGTCATATTCATTC 2026
|| |||| |||||||| ||| || ||||| || || ||||| || ||||||| ||
Sbjct 1894 CGAGAAAGTATTTCAAACGCAGCCGTTATGATACAGCCATCTCTAACAACATATTCGTTT 1953
Query 2027 AATTCAGGACCTCAGGCAGCTTTGCTGGATGTGGCTTCCATTGCAGCTGACAAG-ATTCT 2085
|| ||| |||||| | || ||| ||||||| |||||||| | || ||| | || ||
Sbjct 1954 AACTCACTACCTCAACCTGCATTGTTGGATGTTGCTTCCATCGGTGCAGACC-GTATCCT 2012
Query 2086 TCTA-TTAGATGCATATTTTAGTGTTGTTGTCTTCCATGGAATGACTATATCGCA-A-TG 2142
|| || ||| | || |||||||||| || |||||||||||||| || | ||| | ||
Sbjct 2013 -CTTGTTGGATTCTTACATTAGTGTTGTCGTTTTCCATGGAATGACCAT-T-GCACAGTG 2069
Query 2143 GCGAAACATGGGTTATCATCATCAGCCTGAACATGAGGCCTTTGCTCAGTTATTGCAAGC 2202
||| |||||||| ||||| ||||||||||||| |||| ||||| || | ||| ||||
Sbjct 2070 GCGCAACATGGGATATCAAAATCAGCCTGAACACCAGGCATTTGCACAACTCTTGGAAGC 2129
Query 2203 TCCGCAAGAGGATTCCCAGATGTT-AGTCCGGGAGCGTTTCCCAGTCCCGAGATTAGTTG 2261
|| ||||| ||| | |||||| | | || | || |||||||| || || ||||||||||
Sbjct 2130 CCCTCAAGAAGATGCACAGATGATCATTC-GTGATCGTTTCCCTGTACCAAGATTAGTTG 2188
Query 2262 TGTGTGATCAACATGGATCACAGGCAAGGTTTTTATTGGCTAAGCTGAATCCATCAGCGA 2321
| ||||||||||||||||| |||||||||||| | || || ||||| ||||| |||||||
Sbjct 2189 TTTGTGATCAACATGGATCCCAGGCAAGGTTTCTCTTAGCAAAGCTAAATCCGTCAGCGA 2248
Query 2322 CTTACAACAATGCAAACGAGATGTCA-GCTGGGTCAGACATAATCTTCACTGACGATGTG 2380
| ||||||||||| | ||||| | | || || || || ||||||||||| || |||||
Sbjct 2249 CATACAACAATGCGAGCGAGACGA-ATGCAGGCTCTGATATAATCTTCACGGATGATGTC 2307
Query 2381 AGCCTGCAAGTCTTTATTG-AACATCTTCAGAAACTGGCCGTGCAATCCTGAG 2432
|| || |||||||| || |||||||||||||| |||| || ||||| ||||
Sbjct 2308 AGTCTTCAAGTCTTC-TTCCAACATCTTCAGAAATTGGCTGTTCAATCTTGAG 2359
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 104519632280
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5