BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G14180.1
Length=3807
Score E
Sequences producing significant alignments: (Bits) Value
Ahg330097 jgi|Araly1|330097|fgenesh1_pm.C_scaffold_7002324 2778 0.0
> Ahg330097 jgi|Araly1|330097|fgenesh1_pm.C_scaffold_7002324
Length=4020
Score = 2778 bits (1504), Expect = 0.0
Identities = 1735/1845 (94%), Gaps = 21/1845 (1%)
Strand=Plus/Plus
Query 1980 CAGGAGTCTTCAAAACGAGAGATACCAGATATCCTACAGTCTTGAAGCTGAGAGAATAAT 2039
|||||||||||||||||||||||||||| ||||||||||||| || |||||||||||| |
Sbjct 2166 CAGGAGTCTTCAAAACGAGAGATACCAGGTATCCTACAGTCTAGAGGCTGAGAGAATACT 2225
Query 2040 CTTCCATCTACTAAACGAATATGAGTGGGACTTGGGTTCCATTAATATTCATCTAGAATC 2099
|||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2226 CTTCCATCTATTAAACGAATATGAGTGGGACTTGGGTTCCAGTAATATTCATCTAGAATC 2285
Query 2100 TCTGAAGTGGCTTTTTCAACAAGAAAGTATCAGCAAAAGTTTAATTTACCAGATCCAAAA 2159
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2286 TCTGAAGTGGCTTTTTCAACAAGAAAGTATCAGCAAAAGTTTAACTTACCAGATCCAAAA 2345
Query 2160 GATCTCCCGGAACAACTTAATTGGAAATGAAGTTCACAATGTATATGGAGATGGCAGACA 2219
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2346 GATCTCCCGGACCAACTTAATTGGAAATGAAGTTCACAATGTATATGGAGATGGCAGACA 2405
Query 2220 GAGATCCCTCACATATTGGTTTGCAAAGTTGATATCAGAAGGAGACAACTATGCCGCAAC 2279
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2406 GAGATCGCTCACATATTGGTTTGCAAAGTTGATATCAGAAGAAGACAACTATGCCGCAAC 2465
Query 2280 TCTTCTAGTCAACTTGTTGACACAGCTTGCAGAGAAGGAAGAGCAAGAGAATGATGTTAT 2339
|||||| || |||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 2466 TCTTCTGGTTAACTTGTTGACACAACTCGCAGAGAAGGAAGAGCAAGAGAATGATGTTAT 2525
Query 2340 CTCAATTTTAAATCTCATGAACACAATTGTTTCTATATTCCCAACTGCCTCCAACAATTT 2399
||| ||||||||||| || | |||||||||||||||||||||||||||||||||| ||||
Sbjct 2526 CTCGATTTTAAATCTAATTACCACAATTGTTTCTATATTCCCAACTGCCTCCAACCATTT 2585
Query 2400 ATCCATGAATGGAATTGGGAGTGTAATTCATAGACTCGTTTCTGGT-TTCAGTAACTCAT 2458
|| |||| ||| ||||| | |||| |||||||||||||||||||| || | |||||||
Sbjct 2586 TTCTATGATTGGCATTGGCAATGTAGTTCATAGACTCGTTTCTGGTATT-AATAACTCAG 2644
Query 2459 CCTTGGGAACATCGTTTAGAACACTCCTTCTGCTAGTATTCAACATTTTAACTTCTGTGC 2518
||||| |||||||||||| ||||||||||||||||||||||||||||||| ||| |||||
Sbjct 2645 CCTTGCGAACATCGTTTAAAACACTCCTTCTGCTAGTATTCAACATTTTAGCTTGTGTGC 2704
Query 2519 AACC-GGCAGTGCTTATGATTGATGAATCATGGTATGCTGTATCGATAAAGTTGTTAAAT 2577
|||| || |||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2705 AACCTGG-AGTGCTAATGATTGATGAATCATGGGATGCTGTATCGATAAAGTTGTTAAAT 2763
Query 2578 TTTTTGAGCTTGCGAGACACTGCTATAAAACAGAACCATGAAGATATGGTGGTGATTGGC 2637
||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||
Sbjct 2764 TTTTTGAGCTTGCGAGACACTGCCATAAAACAGAACCATGAAGATGTGATGGTGATTGGC 2823
Query 2638 ATTCTTTCTTTGGTTCTGTACCACTCGTCAGATGGAGCACTTGTGGAAGCTTCAAGAAAT 2697
|||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||| |
Sbjct 2824 ATTCTTTCATTGGTTCTGTACCACTCTTCAGATGGAGCACTTGTGGAAGCTTCGCGAAGT 2883
Query 2698 ATTGTGTC-GAATTCGTACCTGGTATCAGCAATCAACACTGTGGTTGATGTAGCCTGCTC 2756
|| | | |||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct 2884 ATACT-ACTGAATTCGTACTTGGTATCAGCAATCAACACTGTGGTTGATGTAGCTTGCTC 2942
Query 2757 AAAGGGTCCAGCATTGACTCAGTGTCAGGATGAAACTAACATCGGAGAGGCTCTAGCATT 2816
||||||||||||| ||||||||| ||||||||||||| ||||||| ||||||||||||||
Sbjct 2943 AAAGGGTCCAGCACTGACTCAGTATCAGGATGAAACTGACATCGGGGAGGCTCTAGCATT 3002
Query 2817 CACGTTACT-TCTCTATTTTTTCTCACTAAGAAGTTTGCAGATTGTTCTAGCTGGAGCAG 2875
||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 3003 CACGTTA-TCTCTCTATTTTTTCTCATTAAGAAGTTTGCAGATTGTTCTAGCTGGAGCAG 3061
Query 2876 TAGATTGGCAAACTTTCTTTGGCACGTCGACCAGCCTGGAAACACTACCCGTAGTCTGCA 2935
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 3062 TAGATTGGCAAACTTTCTTTGGCACGTCGACCAGCCTAGAAACACTACCCGTAGTCTGCA 3121
Query 2936 TCCATTGCCATAATTTGTGCAGGTTGATGCATTTTGGAGCACCACAAATCAAGCTTATCG 2995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3122 TCCATTGCCATAATTTGTGCAGGTTGATGCATTTTGGAGCACCACAAATCAAGCTTATCG 3181
Query 2996 CCTCTTATTGTCTTTTGGAGTTGCTCACTGGACTATCAGAACAGGTTGACATaaaaaaaG 3055
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 3182 CCTCTTATTGTCTTTTGGAGTTGCTCACTGGACTATCAGAACAGATTGACATAAAAAAAG 3241
Query 3056 AGCAACTACAGTGTTCATCGAGTTACCTAAAATCAATGAAGGCTGTTTTAGGTGGTCTTG 3115
|||||| || ||||||||| |||||||| |||||||||||| ||||||||||||||||||
Sbjct 3242 AGCAACCACGGTGTTCATCAAGTTACCTGAAATCAATGAAGACTGTTTTAGGTGGTCTTG 3301
Query 3116 TATTCTGTGATGACATAAGAGTAGCGACAAACTCTGCGCTTTGTCTTTCCATGATTTTAG 3175
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 3302 TATTCTGTGATGACATAAGAGTAGCGACAAACTCTGCGCTTTGTCTGTCCATGATTTTAG 3361
Query 3176 GATGGGAAGACATGGAAGGAAGAACAGAGATGCTTAAGACCAGCTCATGGTACAGGTTTA 3235
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3362 GTTGGGAAGACATGGAAGGAAGAACAGAGATGCTTAAGACCAGCTCATGGTACAGGTTTA 3421
Query 3236 TTGCAGAAGAAATGTCAGTTTCCTTGGCCATGCCTTGTTCAGCATCAAGTACATACGTGA 3295
||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct 3422 TTGCAGAAGAAATGTCAGTTTCCTTGGCCATGCCTTGTTCAGCATTTAGTGCATACGTGA 3481
Query 3296 ACCACCACAAGCCGGCAGTCTATCTAACCGTTGCCATGCTAAGACTCAAGAACAAGCCAG 3355
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3482 ACCACCACAAGCCAGCAGTCTATCTAACCGTTGCCATGCTAAGACTCAAGAACAAGCCAG 3541
Query 3356 TTTGGCTGAGAACTGTTTTTGATGAGTCTTGCATCTCTAGCATGATTCAAAATCTGAATG 3415
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3542 TGTGGCTGGGAACTGTTTTTGATGAGTCTTGCATCTCTAGCATGATTCAAAATCTGAATG 3601
Query 3416 GGATAAACATCAGCAGAGAGATTGTAATATTATTTCGAGAACTTATGCAGGCTGAGTTAT 3475
||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 3602 GGATAAATATCAGCAGAGAGATTGTAATATTGTTTCGAGAACTTATGCAGGCTGAGCTAT 3661
Query 3476 TGAATTCCCAGCAAGTGACCAAGTTGGATCGTGCATTCCAGGAATGTAGAAAACAAATGC 3535
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 3662 TGAATTCCCAGCAAGTGACCAAGTTGAATCGTGCATTCCAGGAATGTAGAAAACAAATGC 3721
Query 3536 ACAGGAATGGAACTCGAGATGAGACAGTTGAAGAACAAGTGCAACGGAAAATTCCCTCAA 3595
||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||
Sbjct 3722 ACAGGAATGGAACTCGAGATGAGGCAGTTGAAGAACAAGTGCAACTGAAAATTTCCTCAA 3781
Query 3596 TCCATGATCATAGTGAGTTCTGCAACTATCTTGTTCATTTGATGGTATCTAATTCGTTTG 3655
||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct 3782 TCCATGATCATAGTGAGCTCTGCAACTATCTTGTTCATTTGATGGTATCTAATTCATTTG 3841
Query 3656 GACACCCAAGTGAAAGCGAAACATACACCCAGAAGAAGAAACAGATTCTTGATGAGATGG 3715
||||| |||||| |||| ||||||| ||||||||||||||||||||||| || || ||||
Sbjct 3842 GACACACAAGTGGAAGCCAAACATAAACCCAGAAGAAGAAACAGATTCTCGACGAAATGG 3901
Query 3716 AACAATTCTCCGAGCTAATATCAAC-AA-GA-G-AA--G------G-CCGTGTAAGCCCT 3762
||||||||| ||||||| ||||| || || | || | | ||||||||| ||
Sbjct 3902 AACAATTCTTCGAGCTATTATCAGGGAATGATGTAACTGATACAAGACCGTGTAAGGTCT 3961
Query 3763 ATACAAGAAGAAACAAGACAAATGCAAACAGAGAGAATCGTGTAG 3807
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3962 ATACAAGAAGAAACAAGACAAATGCAAACAGAGAGAATCGTGTAG 4006
Score = 1598 bits (865), Expect = 0.0
Identities = 1004/1073 (94%), Gaps = 2/1073 (0%)
Strand=Plus/Plus
Query 1 ATGTTCTTCCAACACTCACAGTTGCAAAACTCCGATCATCTCCTCCATGAATCTATGGCG 60
|||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 1 ATGTTCTTCCTAGACTCACAGCAGCAAGACTCCGATCATCTCCTCCATGAATCTATGGCG 60
Query 61 GATTCAAACCATCAATCTCTTTCGCCGCCATGCGCTAACGGCCACCGATCCACAATTTCT 120
||| || ||||||||||||| || |||| |||||| ||||||||||||||||||||||||
Sbjct 61 GATCCAGACCATCAATCTCTGTCCCCGCAATGCGCGAACGGCCACCGATCCACAATTTCT 120
Query 121 CTCCGCGACGACCAAGGGGGAACATTCTGCTTAATCTGCTTCTCCAATCTCGTCTCCGAT 180
||||||| ||||||||| || ||||||||||| ||||||||||||||||||||||||||
Sbjct 121 CTCCGCGCCGACCAAGGCGGCACATTCTGCTTCATCTGCTTCTCCAATCTCGTCTCCGA- 179
Query 181 CC-ACGCATTCCCACTGTACATGTCTCCTACGCGCTTCACCAGCTCTCAATCGCTATCTC 239
|| |||| | ||||| || || ||||||||||||||||||||||||||||| ||| ||||
Sbjct 180 CCAACGCGTCCCCACCGTCCACGTCTCCTACGCGCTTCACCAGCTCTCAATTGCTCTCTC 239
Query 240 TGAACCTATCTTCCTCCGAACCTTACTCTCCTCTCATATCCACTTTCTCGTATCGCCTCT 299
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 240 TGAACCTATCTTCCTCCGAACCCTACTCTCCTCTCATATCCACTTTCTCGTATCGCCTCT 299
Query 300 CGTTCACGCTCTCTCTTCGATTGATGATGCTCCAATCGCTATCCAGATTATGGATATGAT 359
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 300 CGTCCACGCTCTCTCTTCGATTGATGATGCTCCAATCGCAATCCAGATTATGGATATGAT 359
Query 360 CTCTCTTCTCTGTTCCGTTGAGGAATCTTCAATCGGTGAGGATTTTGTGGAGAGAATATC 419
||||||||||||||||| || ||||||||||||||| |||||||||||||||||||| ||
Sbjct 360 CTCTCTTCTCTGTTCCGCTGTGGAATCTTCAATCGGCGAGGATTTTGTGGAGAGAATCTC 419
Query 420 CGATCAGCTTTCTTCTGGTGCTTTGGGTTGGAGCCGAAGACAGCTCCATATGCTTCACTG 479
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 CGATCAGCTCTCTTCTGGTGCTTTGGGTTGGAGCCGAAGACAGCTCCATATGCTTCACTG 479
Query 480 CTTTGGTGTTCTTATGAGTTGTGAGAATATAAATATCAATTCTCATATCAGAGATAAAGA 539
|||||| ||||| |||| ||||||||||||| | ||||||| |||||||||||||||||
Sbjct 480 CTTTGGCGTTCTGATGAATTGTGAGAATATAGACGTCAATTCCCATATCAGAGATAAAGA 539
Query 540 AGCTCTTGTTTGCCAACTCGTTGAAGGTCTTCAGTTACCGAGTGAGGAGATCCGTGGTGA 599
||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||
Sbjct 540 AGCTCTTGTTTGCCAACTCGTTGAAGGTCTTCAATTACCAAGTGAGGAGATCCGCGGTGA 599
Query 600 AATTCTTTTTGCTCTGTACAAGTTTTCTGCTCTACAGTTCACAGAACAAAATGTTGATGG 659
||| ||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 600 AATCCTTTTCGTTCTGTACAAATTTTCTGCTCTACAGTTCACAGAACAAAATGTTGATGG 659
Query 660 AATTGAGGTTCTTTCTTTATTGTGTCCTAAGCTTTTATGCCTATCTTTGGAGGCTCTTGC 719
||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct 660 CATTGAAGTTCTTTCTTCATTGTGTCCTAAGCTCTTATGCCTATCTTTGGAGGCTCTTGC 719
Query 720 AAAGACACAGAGAGATGATGTTCGCTTGAATTGTGTAGCCCTGTTGACCATCTTGGCCCA 779
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 720 AAAGACACAGAGAGATGATGTTCGCTTGAATTGTGTAGCCCTTTTGACCATCTTGGCCCA 779
Query 780 GCAAGGTCTTTTAGCAAATTCACATTCAAATAGTGCCAGCAGCATGAGCTTGGATGAAGT 839
||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||
Sbjct 780 GCAAGGTCTTTTAGCAAATTCACATACAAATAATTTCAGCAGCATGAGCTTGGATGAAGT 839
Query 840 GGATGATGACCCTATGCAGACTGCTGAGAATGTAGCCGCCAGGCCTTGTTTAAATGTCTT 899
|||||||||||||||||||| ||||||| | ||| ||||||||||||||||||||||||
Sbjct 840 TGATGATGACCCTATGCAGACAGCTGAGACTCTAGTCGCCAGGCCTTGTTTAAATGTCTT 899
Query 900 ATTTGCTGAGGCAATCAAAGGTCCGTTGCTTTCCACTGACAGCGAGGTGCAAATAAAAAC 959
||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||| |||
Sbjct 900 ATTTGCTGAGGCAATTAAAGGGCCGTTGCTTTCCACTGACAGTGAGGTGCAAATAAGAAC 959
Query 960 CCTTGATCTTATCTTCCACTACATATCTCAAGAGAGTACACCAAGCAAACAAATTCAAGT 1019
|||||||||||||||||||||| |||| |||||||||| |||||||||||| ||||||||
Sbjct 960 CCTTGATCTTATCTTCCACTACGTATCCCAAGAGAGTAAACCAAGCAAACAGATTCAAGT 1019
Query 1020 TATGGTAGAAGAAAATGTTGCTGATTATATATTTGAGATACTGCGGTTATCAG 1072
||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1020 TATGGTAGACGAAAATGTTGCTGATTATATATTTGAGATACTGCGGTTATCAG 1072
Score = 1465 bits (793), Expect = 0.0
Identities = 876/916 (96%), Gaps = 6/916 (1%)
Strand=Plus/Plus
Query 1071 AGCCGAGCATTCCTTTCGGAAGAGACTTGTTATTGGGTTTCCTTCAGTCATCCGAGTGCT 1130
||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1128 AGCCGAGCAATCCTTTCGGAAGAGACTTGTTATTGGGTTTCCTTCAGTCATCCAAGTGCT 1187
Query 1131 TCACTATGTAGGCGAAGTTCCTTGCCATCCTTTTCAAATACAGACACTGAAGCTTATTTC 1190
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1188 TCACTATGTAGGTGAAGTTCCTTGCCATCCTTTTCAAATCCAGACACTGAAGCTTATTTC 1247
Query 1191 GAGCTGTATCTCTGATTTCCCTGGGATTGCTTCTAGTTCTCAAGTTCAGGAAATTGCTCT 1250
||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1248 GAGCTGTATTTCAGATTTCCCTGGGATTGCTTCTAGTACTCAAGTTCAGGAAATTGCTCT 1307
Query 1251 GGTTCTGAAAAAGATGCTTGAAAGATATTATTCTCAGGAGATGGGATTATTTCCGGATGC 1310
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1308 GGTTCTGAAAAGGATGCTTGAAAGATATTATTCTCAGGAGATGGGATTATTTCCGGATGC 1367
Query 1311 ATTTGCTATTATCTGCTCAGTCTTTGTTTCCCTTATGAAAACTCCATCTTTTGGGGAGAC 1370
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1368 ATTTGCGATTATCTGCTCAGTCTTTGTTTCCCTTATGAAAACTCCATCTTTTGCGGAGAC 1427
Query 1371 TGCGGATGTGTTAACATCATTGCAAGAATCCTTGAGACATTCCATTTTGGCCTCTCTTAG 1430
||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 1428 TGCAGATGTGTTAACATCATTGCAAGAATCCTTGAGACATGCTATTTTGGCCTCTCTTAG 1487
Query 1431 TCTCCCTGAGAAAGATTCAACCCAGATATTGCATGCAGTCTACTTACTCAATGAAGTATA 1490
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1488 TCCCCCTGAGAAAGATTCAACCCAGATATTGCATGCAGTCTACTTACTCAATGAAGTATA 1547
Query 1491 TGTGTATTGTACTGCATCAACATCCATAAACAAGACCATTTGCATTGAGCTAAGACACTG 1550
|| |||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 1548 TGCATATTGTACTGCACCAACATCCATAAACAAGACCAGTTGCATTGAGTTAAGACACTG 1607
Query 1551 TGTTATAGACGTGTGTACATCACATCTATTGCCTTGGTTTCTCT-CTGATGTCAACGAGG 1609
|||||||||||||||| |||||||||||||||| |||||||| | |||||||||||||||
Sbjct 1608 TGTTATAGACGTGTGTGCATCACATCTATTGCCGTGGTTTCT-TGCTGATGTCAACGAGG 1666
Query 1610 TCAATGAGGAAGCAACTCTTGGCATAATGGAAACTTTCCATTCTATTCTGCTACAGAATT 1669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1667 TCAATGAGGAAGCAACTCTTGGCATAATGGAAACTTTCCATTCTATTCTGCTACAGAATT 1726
Query 1670 CAGATATTCAAGCCAAGGAGTTTGCAGA-ATTGCTTGTTTCAGCAGATTGGTTCAGCTTT 1728
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 1727 CAGATATTCAAGCCAAGGAGTTTGCAGAGAT-GCTTGTTTCAGCAGATTGGTTCAGCTTT 1785
Query 1729 TCGTTTGGATGTCTAGGAAACTTTTGTACAGATAATATGAAACAGAGGATATATTTGATG 1788
|| ||||||||||| |||||||||||||| | ||| ||||||||||||||||||||||||
Sbjct 1786 TCATTTGGATGTCTTGGAAACTTTTGTACGGCTAACATGAAACAGAGGATATATTTGATG 1845
Query 1789 CTCAGTTCCCTTGTTGATATACTTCTCGAACAGAAAACGGGGTCACATATCAGAGATGCT 1848
|||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||
Sbjct 1846 CTCAGTTCCCTTGTTGATGTTCTTCTCGAACAGAAAACGGCGTCACATATCAGAGATGCT 1905
Query 1849 CTTCATTGTCTTCCTTCTGATCCACAAGATTTGCTGTTTTTGCTCGGGCAAG-CTAGTTC 1907
||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||
Sbjct 1906 CTTCATTGTCTTCCTTCGGATCCACAAGATTTGCTGTTTTTGCTCGGGCAAGAC-AGTTC 1964
Query 1908 CAATAATCAGGAATTGGCTTCTTGCCAGTCCGCAGCTCTGCTGATTTTCCATACAAGTTC 1967
||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1965 CAATAATCAAGAATTGGCTTCTTGCCAGTCCGCAGCTCTGCTGATTTTCCATACCAGTTG 2024
Query 1968 GATATACAATGACAGG 1983
||| ||||||||||||
Sbjct 2025 GATGTACAATGACAGG 2040
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 143857625940
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5