BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G14240.1
Length=1985
Score E
Sequences producing significant alignments: (Bits) Value
Ahg493485 jgi|Araly1|493485|fgenesh2_kg.7__2918__AT4G14240.1 2878 0.0
Ahg493487 jgi|Araly1|493487|fgenesh2_kg.7__2920__AT4G14230.1 1351 0.0
Ahg311427 jgi|Araly1|311427|fgenesh1_pm.C_scaffold_1000207 285 8e-76
> Ahg493485 jgi|Araly1|493485|fgenesh2_kg.7__2918__AT4G14240.1
Length=1960
Score = 2878 bits (1558), Expect = 0.0
Identities = 1859/1997 (93%), Gaps = 50/1997 (3%)
Strand=Plus/Plus
Query 1 ATGTTGGTGAGATCCAACGAATTATaaaattatcaaaaagaggc----aaaattaaaaaa 56
||||||||||||||||||||||||||||||||||||||||| || |||| ||||||
Sbjct 1 ATGTTGGTGAGATCCAACGAATTATAAAATTATCAAAAAGAAGCAAAAAAAAAAAAAAAA 60
Query 57 GAAGGTCGTGTGACCAGAGAATCACAAACACAGAGAGATTCATCATCGAATCATAAAGCT 116
||||||||||| ||||||||||||| | ||||||||| | |||||||||||| ||||
Sbjct 61 AAAGGTCGTGTGCCCAGAGAATCACATATACAGAGAGA-T--TCATCGAATCAT-CAGCT 116
Query 117 CTGTTTTCAAGAAGAAAATATGCATCTGATTAATGCGGTGGCGGCGGCGAGGATTTTATC 176
|||||||| | ||| || ||||||||||||||||||||||||||||||||||| |||||
Sbjct 117 CTGTTTTCTATAAG--AAGATGCATCTGATTAATGCGGTGGCGGCGGCGAGGATGTTATC 174
Query 177 CGGAATCGGACAATCTAACGGTAA-TAACGGAGGAGAAGCGATTCCGTTTGGATCGTTTG 235
|||||||||||||| ||||||||| | || || |||||||||||||||||||||||||
Sbjct 175 CGGAATCGGACAATTTAACGGTAACGGA-GGTGGTGAAGCGATTCCGTTTGGATCGTTTG 233
Query 236 AGTGGATCACTTACGCCGGAATATCTTGTTTCCTCGTACTCTTCGCCGGGATTATGTCTG 295
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 234 AGTGGATCACTTACGCCGGAATCTCTTGTTTCCTCGTACTCTTCGCCGGGATTATGTCTG 293
Query 296 GTCTTACTTTGGGACTTATGTCTCTTGGTCTTGTCGAGCTTGAGATTCTTCAACGTAGTG 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 294 GTCTTACTTTGGGACTTATGTCTCTTGGTCTTGTCGAGCTTGAGATTCTTCAACGTAGTG 353
Query 356 GTACTCCTAATGAGAAGAAACAAGCCGCTGCGATTTTTCCGGTTGTTCAGAAACAGCATC 415
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 354 GTACTCCTAACGAGAAGAAACAAGCCGCTGCGATTTTTCCGGTTGTTCAGAAACAGCATC 413
Query 416 AGCTTTTAGTGACACTGCTTCTGTGTAATGCTATGGCTATGGAGGGGCTTCCTATATATT 475
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 414 AGCTTTTAGTGACACTGCTTCTGTGTAATGCTATGGCTATGGAGGGGCTTCCTATATACT 473
Query 476 TGGATAAGTTATTCAATGAATACGTTGCGATTATTCTTTCTGTCACATTCGTTCTTGCTT 535
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 474 TGGATAAGTTGTTCAATGAATACGTTGCGATTATTCTTTCGGTCACATTCGTTCTTGCTT 533
Query 536 TCGGTGAGGTTATTCCTCAAGCGATATGCACTAGGTATGGACTCGCGGTTGGAGCGAATT 595
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 534 TCGGTGAGGTTATTCCTCAAGCGATATGCACTAGGTATGGACTTGCGGTTGGAGCGAATT 593
Query 596 TTGTCTGGCTTGTCCGCATTTTAATGACTCTCTGCTATCCGATTGCCTTTCCCATTGGCA 655
| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 594 TCGTCTGGCTTGTCCGCATTTTAATGACTCTCTGCTACCCTATTGCCTTTCCCATTGGCA 653
Query 656 AGATTTTAGATTTGGTGCTGGGACACAATGATGCTTTATTTAGGCGGGCTCAGTTGAAAG 715
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 654 AGATCTTAGATTTGGTGCTGGGACACAATGACGCTTTATTTAGGCGGGCTCAGTTGAAAG 713
Query 716 CTCTTGTATCCATTCACAGCCAAGAGGCTGGTAAGGGAGGTGAGCTTACACATGATGAGA 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 714 CTCTTGTATCCATTCACAGCCAAGAGGCTGGTAAGGGAGGTGAGCTTACACATGATGAGA 773
Query 776 CGACAATCATTAGTGGAGCTCTTGATTTGACTGAGAAGACTGCACAAGAAGCCATGACAC 835
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 774 CGACCATCATTAGTGGAGCTCTTGATTTGACTGAGAAGACTGCACAAGAAGCCATGACAC 833
Query 836 CAATTGAGTCTACCTTCTCCTTGGATGTAAATTCAAAATTGGATTGGGAAGCTATGGGGA 895
||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 834 CAATTGAATCTACCTTCTCCTTGGATGTTAATTCAAAATTGGATTGGGAAGCTATGGGTA 893
Query 896 AGATTCTGGCACGAGGCCATAGCCGCGTTCCTGTCTACTCTGGGAATCCGAAAAACGTTA 955
||||| | |||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 894 AGATTTTAGCACGAGGCCATAGCCGCGTTCCTGTCTACTCCGGGAATCCAAAAAACGTTA 953
Query 956 TCGGACTTCTCTTGGTGAAGAGTCTTCTTACAGTTCGCCCTGAAACAGAGACCCTTGTCA 1015
| || |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 954 TTGGCCTTCTCTTGGTGAAGAGTCTACTTACTGTTCGCCCTGAAACAGAGACCCTTGTCA 1013
Query 1016 GCGCAGTTTGTATACGCCGGATTCCAAGGGTTCCAGCTGATATGCCTCTCTATGATATAC 1075
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1014 GCGCAGTTTGTATACGCCGGATTCCAAGGGTTCCAGCTGATATGCCTCTGTATGATATAC 1073
Query 1076 TGAATGAGTTTCAAAAGGGAAGCAGTCACATGGCTGCAGTTGTGAAGGTTAAGGGGAAAA 1135
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1074 TGAATGAGTTTCAAAAGGGAAGTAGTCACATGGCTGCAGTTGTGAAGGTTAAGGGGAAAA 1133
Query 1136 GCAAAGTCCCACCTTCAACTTTGCTTGAAGAACACACT-GATGAAAGCAATGACTCCGAC 1194
||||||| || ||| ||||||||| ||||||| ||||| | ||||||||||||||||||
Sbjct 1134 GCAAAGTTCCTCCTACAACTTTGCCTGAAGAAAACACTTGC-GAAAGCAATGACTCCGAC 1192
Query 1195 TTGACTGCACCTTTGTTACTAAAACGAGAGGGAAACCATGACAATGTCATTGTCACAATC 1254
|||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 1193 TTGACTGCACCTCTGTTACTAAAACGAGATGGAAACCACGACAATGTCATTGTCACAATC 1252
Query 1255 GACAAGGCTAATGGACAATCTTTCTTTCAAAACAACGAGAGTGGACCTCACGGGTTTTCA 1314
|||||||||||||||||||| |||| ||||||||||||||||||||| |||||||| |||
Sbjct 1253 GACAAGGCTAATGGACAATCGTTCTATCAAAACAACGAGAGTGGACCACACGGGTTCTCA 1312
Query 1315 CATACTTCAGAGGCTATCGAGGATGGTGAGGTAATTGGTATCATCACTTTAGAAGATGTC 1374
|||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||
Sbjct 1313 CATACTTCAGAGGCTATCGAGGATGGCGAAGTAATCGGTATCATCACTTTAGAAGATGTG 1372
Query 1375 TTTGAAGAACTTTTGCAAGAAGAGATTGTGGATGAAACTGATGAATATGTTGACGTACAT 1434
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1373 TTTGAAGAACTTTTGCAAGAAGAGATTGTGGATGAAACAGATGAATATGTTGACGTACAT 1432
Query 1435 AAAAGGATTCGAGTAGCAGCAGCAGCGGCTGCTTCATCAATAGCGAGAGCTCCTTCAAGC 1494
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1433 AAAAGGATTCGAGTAGCAGCAGCAGCAGCTGCCTCATCAATAGCGAGAGCTCCTTCAAGC 1492
Query 1495 CGGAAGTTGCTTGCGCAAAAGGGAACTGGAGGACAAAATAAGCAAGGGCAGACGAATAAA 1554
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1493 CGGAAATTGCTTGCACAAAAGGGAACTGGAGGACAAAATAAGCAAGGGCAGACGAATAAA 1552
Query 1555 GTTCCTGGTCAGGAACAAGATAAAATGCTTGGAACTATTACCGAGCCGATTCGAAGAAAC 1614
| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1553 GGTGCTGGTCAGGAACAAGATAAAATGCTTGGAACTATTACTGAGCCGATTCGAAGAAAC 1612
Query 1615 AACTGATGTTGTGTTCTTGCTTAAGGAGGCAAAAACTCTGTTGCGGTATAAAGAAAGAAA 1674
||||||| || |||| |||||||||||| ||||||||||||||| |||||||||||||||
Sbjct 1613 AACTGATATTATGTTGTTGCTTAAGGAGTCAAAAACTCTGTTGCCGTATAAAGAAAGAAA 1672
Query 1675 ACAAAGAATAAATTATAA-GATCCAGGTTCTTCTGTATACTTTGATCCATCACataaatt 1733
|||||||||||| || || ||||||||||||||||||||||| |||||||||||||||||
Sbjct 1673 ACAAAGAATAAACTA-AATGATCCAGGTTCTTCTGTATACTT-GATCCATCACATAAATT 1730
Query 1734 atatatatataaaaatataaaaaGTCAGCAGAAGCAATGGTTCAACCCGATTTTTGAAGA 1793
| ||||||| | ||| | ||||||||||| |||||||| ||| |||||||||||
Sbjct 1731 ACATATATA-AGAAA-A------GTCAGCAGAAGAAATGGTTCGTCCCAATTTTTGAAGA 1782
Query 1794 TGCTTTGTTTCCTTGTATTATACAAAATACCTACAATTT-GTAATTTACTCCGTAACTTG 1852
|| ||||||| |||||||| |||||||||| |||||||| ||||||||||||||||||||
Sbjct 1783 TGTTTTGTTTTCTTGTATTCTACAAAATACGTACAATTTTGTAATTTACTCCGTAACTTG 1842
Query 1853 ATTCttttttcctttttGTTCACTCAATTTTTCGTAGAATGCAGTAGTAATAGTTAGCTA 1912
|||||||||| ||||| | |||||||||||||| |||| |||||||
Sbjct 1843 ATTCTTTTTT--TTTTT---C------------GTAGAATGCAGTAGCAATAATTAGCTA 1885
Query 1913 TATGGTCACATACT-GTTGTGGCCGCTATTTTGTAATTGCACT--TTT-GAAACAATGGA 1968
|||||| |||||| || ||||||||||||||||||||||| | ||| |||||||||||
Sbjct 1886 TATGGTAACATACCAGT-GTGGCCGCTATTTTGTAATTGCAATAGTTTTGAAACAATGGA 1944
Query 1969 TCAAA-AGTTTCTCCAT 1984
||||| | |||||||||
Sbjct 1945 TCAAATA-TTTCTCCAT 1960
> Ahg493487 jgi|Araly1|493487|fgenesh2_kg.7__2920__AT4G14230.1
Length=1652
Score = 1351 bits (731), Expect = 0.0
Identities = 1201/1421 (85%), Gaps = 59/1421 (4%)
Strand=Plus/Plus
Query 136 ATGCATCTGATTAATGCGGTGGCGGCGGCGAGGATTTTATCCGGAATCGGACAATCTAAC 195
||||||| |||||||||||||| ||||||||||| || |||||||| | |||||||||
Sbjct 11 ATGCATCCGATTAATGCGGTGGTTGCGGCGAGGATGTTGGCCGGAATCAGTCAATCTAAC 70
Query 196 GGTAATAACGGAGGAGAAGCGATTCCGTTTGGATCGTTTGAGTGGATCACTTACGCCGGA 255
| | | | | | ||||| || || ||||||||| |||||||||||| ||||||||||
Sbjct 71 -G-CCTTA-GAAAGCGAAGCAATCCCCTTTGGATCGCTTGAGTGGATCATTTACGCCGGA 127
Query 256 ATATCTTGTTTCCTCGTACTCTTCGCCGGGATTATGTCTGGTCTTACTTT-GGGACTTAT 314
|| ||||||||||| || ||||||||||| |||||||||||||| ||||| ||| |||||
Sbjct 128 ATCTCTTGTTTCCTTGTTCTCTTCGCCGGAATTATGTCTGGTCTCACTTTAGGG-CTTAT 186
Query 315 GTCTCTTGGTCTTGTCGAGCTTGAGATTCTTCAACGTAGTGGTACTCCTAATGAGAAGAA 374
|||||| ||||| |||||||| ||||||||||||| |||||||||||| || ||||||||
Sbjct 187 GTCTCTCGGTCTCGTCGAGCTCGAGATTCTTCAACATAGTGGTACTCCAAAAGAGAAGAA 246
Query 375 ACAAGCCGCTGCGATTTTTCCGGTTGTTCAGAAACAGCATCAGCTTTTAGTGACACTGCT 434
|||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 247 ACAATCTGCTGCGATTTTTCCGGTTGTTCAGAAACAGCATCAGCTTTTAGTGACTCTGCT 306
Query 435 TCTGTGTAATGCTA-TGGCTATGGAGGGGCTTCCTATATATTTGGATAAGTTATTCAATG 493
||||| |||||| | | ||||||||||||||||||||||| ||||||||| |||||||||
Sbjct 307 TCTGTTTAATGC-ACTTGCTATGGAGGGGCTTCCTATATACTTGGATAAGATATTCAATG 365
Query 494 AATACGTTGCGATTATTCTTTCTGTCACATTCGTTCT-TGCTT-TCGGTGAGGTTATTCC 551
| || ||||| |||||||| || ||||| ||||| || | || |||| |||||||||||
Sbjct 366 AGTATGTTGCTATTATTCTATCGGTCACTTTCGTGCTAT--TTGTCGGAGAGGTTATTCC 423
Query 552 TCAAGCGATATGCACTAGGTATGGACTCGCGGTTGGAGCGAATTTTGTCTGGCTTGTCCG 611
|||||| ||||| ||||| |||||||| || || ||||| ||||| || |||||||||||
Sbjct 424 TCAAGCTATATGTACTAGATATGGACTAGCAGTGGGAGCTAATTTGGTTTGGCTTGTCCG 483
Query 612 CATTTTAATGACTCTCTGCT-ATCCGAT-TGCCTTTCCCATTGGCAA-GATTTTAGATTT 668
|| || ||| ||| | || | ||||| | | ||||| |||| ||| ||| || ||||
Sbjct 484 TATCTTGATGGTTCTGT-CTTACCCGATAT-CTTTTCCTATTG-CAAAGATGTTGGATTG 540
Query 669 GGTGCTGGGACACAATGATGCTTTATTTAGGCGGGCTCAGTTGAAAGCTCTTGTATCCAT 728
||| ||||||||||||| |||| ||||| ||||||||||||||||||||||| |||||
Sbjct 541 GGTATTGGGACACAATGACCCTTTGTTTAGACGGGCTCAGTTGAAAGCTCTTGTGTCCAT 600
Query 729 TCACAGCCAAGAGGCTGGTAAGGGAGGTGAGCTTACACATGATGAGACGACAATCATTAG 788
||| | ||| ||||| ||||||||||| ||||||||||||||||| |||||||| ||
Sbjct 601 TCATGGTGAAGCTGCTGGAAAGGGAGGTGAACTTACACATGATGAGACCACAATCATAAG 660
Query 789 TGGAGCTCTTGATTTGACTGAGAAGACTGCACAAGAAGCCATGACACCAATTGAGTCTAC 848
|||||| ||||||||||| ||||||||||| |||||||||||||| || ||||| || ||
Sbjct 661 TGGAGCACTTGATTTGACGGAGAAGACTGCTCAAGAAGCCATGACTCCTATTGAATCAAC 720
Query 849 CTTCTCCTTGGATGTAAATTCAAAATTGGATTGGGAAGCTATGGGGAAGATTCTGGCACG 908
||| |||||||||||||||||||| |||||| |||||||||||| ||||||| |||||
Sbjct 721 CTTTTCCTTGGATGTAAATTCAAAGTTGGATAGGGAAGCTATGGATAAGATTCAAGCACG 780
Query 909 AGGCCATAGCCGCGTTCCTGTCTACTCTGGGAATCCGAAA-AACGTTATCGGACTTCTCT 967
||| || |||||| ||||||||||||||| |||||| ||| || ||||| ||||||||||
Sbjct 781 AGGTCACAGCCGCATTCCTGTCTACTCTGAGAATCC-AAAGAATGTTATTGGACTTCTCT 839
Query 968 TGGTGAAGAGTCTTCTTACAGTTCGCCCTGAAACAGAGACCCTTGTCAGCGCAGTTTGTA 1027
||||||||||||| |||||||||||||||||||||| |||||||||||| |||||| |||
Sbjct 840 TGGTGAAGAGTCTACTTACAGTTCGCCCTGAAACAGGGACCCTTGTCAGTGCAGTTGGTA 899
Query 1028 TACGCCGGATTCCAAGGGTTCCAGCTGATATGCCTCTCTATGATATACTGAATGAGTTTC 1087
||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 900 TACGCCGAATTCCAAGGGTTCCAGCTGATATGCCTCTGTATGATATACTAAATGAGTTTC 959
Query 1088 AAAA-GGGAAGCAGTCACATGGCTGCAGTTGTGAAGGTTAAGGGGAAAAGCAAAG-TCCC 1145
|||| |||| ||||||||||||| ||||||||||||||||| ||||||||||||| ||
Sbjct 960 AAAAAGGGA-GCAGTCACATGGCAGCAGTTGTGAAGGTTAACGGGAAAAGCAAAGGTCAT 1018
Query 1146 ACCTTCAACTTTGCTTGAAGAACACA-CTGATGAAAGCAA--T-----G-A----CTCCG 1192
|||| |||||||||||||||| | | | | ||||||||| | | | |||||
Sbjct 1019 -CCTTTAACTTTGCTTGAAGAAAATAGCAG-TGAAAGCAACGTCTCAAGTAATAACTCCG 1076
Query 1193 ACTTGACTGCACCTTTGTTACTAAAACGAGAGGGAAACCATGACAATGTCATTGTCA-CA 1251
| |||||||||||| |||||||||| ||||| |||||||| |||| |||||||||| ||
Sbjct 1077 AGTTGACTGCACCTCTGTTACTAAAGCGAGAAGGAAACCACGACAGTGTCATTGTCCGCA 1136
Query 1252 ATCGACAAGGCTAATGGACAATCTTTCTTTCAAAACAACGAGAGT-GG-ACCTCACGGGT 1309
|||||||||||||||||||||| ||| | || |||| | || | ||||| |
Sbjct 1137 -TCGACAAGGCTAATGGACAATCGTTCA--C----CAGCGAG-GCCGGCAGA-CACGGAT 1187
Query 1310 TTTCACATACTTCAGAGGCTATCGAGGATGGTGAGGTAATTGGTATCATCACTTTAGAAG 1369
| || ||||||||||||| || || ||||| || ||||||||||||||||| || ||||
Sbjct 1188 TCTCGCATACTTCAGAGGAGATTGAAGATGGAGACGTAATTGGTATCATCACATTGGAAG 1247
Query 1370 ATGTCTTTGAAGAACTTTTGCAAGAAGAGATTGTGGATGAAACTGATGAATATGTTGACG 1429
|||| ||||||||||||||||| || ||||||||||||||||| ||||| ||| | ||||
Sbjct 1248 ATGTGTTTGAAGAACTTTTGCAGGAGGAGATTGTGGATGAAACAGATGAGTATATAGACG 1307
Query 1430 TACATAAAAGGATTCGAGTAGC-A--GCAGCAGCGGCTG-C--TT-CATCAATAGCGAGA 1482
| |||||||||||||| || || | | |||||| | || | || ||||| ||||||||
Sbjct 1308 TTCATAAAAGGATTCGTGTGGCGACTGTAGCAGCAG-TGGCCATTTCATCATTAGCGAGA 1366
Query 1483 GCTCCTTCAAGCCGGAAGTTGCTTGCGC-AAAAGGGAACTG 1522
|| |||||| | |||| ||| |||| || |||||||| |||
Sbjct 1367 GCACCTTCAGGTCGGAGGTTACTTG-GCCAAAAGGGATCTG 1406
> Ahg311427 jgi|Araly1|311427|fgenesh1_pm.C_scaffold_1000207
Length=1542
Score = 285 bits (154), Expect = 8e-76
Identities = 348/442 (79%), Gaps = 12/442 (3%)
Strand=Plus/Plus
Query 692 TATTTAGGCGGGCTCAGTTGAAAGCTCTTGTATCCATTCACAGCCAAGAGGCTGGTAAGG 751
|||||||||| |||||| | ||||| ||||| || ||||||||||| |||||||||||||
Sbjct 593 TATTTAGGCGAGCTCAGCTCAAAGCCCTTGTCTCAATTCACAGCCAGGAGGCTGGTAAGG 652
Query 752 GAGGTGAGCTTACACATGATGAGACGACAATCATTAGTGGAGCTCTTGATTTGA-CTGAG 810
| ||||| || ||||| || || || | || || |||||||| || ||||||| | ||
Sbjct 653 GGGGTGAACTGACACACGAGGAAACAATGATTATAAGTGGAGCCCTGGATTTGAGC-CAG 711
Query 811 AAGACTGCACAAGAAGCCATGACACCAATTGAGTCTACCTTCTC-CTTGGATGTAAATTC 869
|||||||| | ||||| ||||| |||||||| || || || || | ||||||| ||| |
Sbjct 712 AAGACTGCTGAGGAAGCTATGACGCCAATTGAATCAACATTTTCGC-TGGATGTTAATAC 770
Query 870 AAAATTGGATTGGGAAGCTATGGGGAAGATTCTGGCACGAGGCCATAGCCGCGTTCCTGT 929
||| || || |||||| | || || || || ||| ||||||| |||||||| | || ||
Sbjct 771 AAAGTTAGACTGGGAAACAATTGGAAAAATACTGTCACGAGGTCATAGCCGAATCCCAGT 830
Query 930 CTACTCT-GGGAATCCGAAAAACGTTATCGGACTTCTCTTGGTGAAGAGTCTTCTTACAG 988
||||| | |||||| ||||||| | || || ||||| ||||| ||||||||||| || |
Sbjct 831 CTACT-TAGGGAATTCGAAAAATATCATTGGGCTTCTATTGGTTAAGAGTCTTCTAACTG 889
Query 989 TTCGCCCTGAAACAGAGAC-CCTTGTCAGCGCAGTTTGTATAC-GCCGGATTCCAAGGGT 1046
| || | || |||||| | || ||| || | |||| || | | ||| ||||||||
Sbjct 890 TACGAGCAGAGACAGAGGCACC-TGTAAGTTCTGTTTCCAT-CAGAAAGATCCCAAGGGT 947
Query 1047 TCCAGCTGATATGCC-TCTCTATGATATACTGAATGAGTTTCAAAAGGGAAGCAGTCACA 1105
|||| | || ||||| | | || ||||| || ||||||||||||||||||||||||||||
Sbjct 948 TCCATCAGACATGCCAT-TGTACGATATCCTCAATGAGTTTCAAAAGGGAAGCAGTCACA 1006
Query 1106 TGGCTGCAGTTGTGAAGGTTAA 1127
||||||||||||| || |||||
Sbjct 1007 TGGCTGCAGTTGTCAAAGTTAA 1028
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 74618789955
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5