BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G14360.1
Length=2418
Score E
Sequences producing significant alignments: (Bits) Value
Ahg493467 jgi|Araly1|493467|fgenesh2_kg.7__2900__AT4G14360.1 3725 0.0
Ahg479845 jgi|Araly1|479845|fgenesh2_kg.3__2546__AT3G23300.1 2045 0.0
Ahg470420 jgi|Araly1|470420|fgenesh2_kg.1__374__AT1G04430.1 959 0.0
> Ahg493467 jgi|Araly1|493467|fgenesh2_kg.7__2900__AT4G14360.1
Length=2403
Score = 3725 bits (2017), Expect = 0.0
Identities = 2291/2420 (95%), Gaps = 31/2420 (1%)
Strand=Plus/Plus
Query 1 AACGACCTCCACCGA---T-tctctctctctctctctctctc-t-TTCACTTGCAGTGTG 54
||||||||||||||| | |||||||||||||||||||||| | |||||||||| ||||
Sbjct 1 AACGACCTCCACCGATTTTATCTCTCTCTCTCTCTCTCTCTCTTCTTCACTTGCACTGTG 60
Query 55 TCGCTTTGCTGCCTTCATTCTCATTTCACACGAAGATTaaaaaaaGTTGGTCTCTTTCCT 114
|||||||||||||||||||| |||| |||||| | || ||||||||||||||||||||||
Sbjct 61 TCGCTTTGCTGCCTTCATTCCCATTCCACACG-A-ATCAAAAAAAGTTGGTCTCTTTCCT 118
Query 115 AATTTAGAAGAGT-GATAAACCAATCCCAGATCCGAGTCTCTCTCCCCATCTCCTTCTTT 173
|||||||| || | | ||||||| |||||||||||||||||||||||||||||||||||
Sbjct 119 AATTTAGAGGA-TACACAAACCAAACCCAGATCCGAGTCTCTCTCCCCATCTCCTTCTTT 177
Query 174 CTCTCTTTTGAATAAC---ACACTGCGGTTTTTTGCCTTTGAGATCTGTCATTGTCTCTT 230
|||||||| ||||||| |||||||||||||||||| | ||||||||||||| ||||||
Sbjct 178 CTCTCTTTCGAATAACATTACACTGCGGTTTTTTGCC-TCGAGATCTGTCATTTTCTCTT 236
Query 231 CCAAATCTAGAACCTTTACTTGGGTTGTATTCAAATATCTGTAACTAGTGAGAAATCATC 290
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 237 CCAAATCTAGAACC-TTACTTGGGTTGTATTCAAATATCTGTAACTAGTGAGAAATCATC 295
Query 291 AATTTTTAAAGCTGAAGTCTTCACTTAGTAGTCTGCATCCTTTAACTCGGAACGTTGGGT 350
||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 296 AATTTATAAAACTGAAGTCTTCACTTAGTAGTCTGCATCCTTTAAGTCGGAACGTTGGAT 355
Query 351 CTCCGTTTGGCTTTATCTCAAATAAGAAGGCAATGAAAGGAAGATCAGATGGAGGGCAAA 410
|||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||
Sbjct 356 CTCCGTTTGGCTTTATCTCAAATAAGAAAGCAATGAAGGGAAGATCGGATGGAGGGCAAA 415
Query 411 AGAAGCGGGTGATTGCTTTGGTTTGCGTTGCAGCGGTAGTTCTTGTTTTCGTATATCTGT 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 416 AGAAGCGGGTGATTGCTTTGGTTTGCGTTGCAGCGGTAGTTCTTGTTTTCGTATATCTGT 475
Query 471 TCTACGGCTCTTCTGATCATAGAGCATCGGCTATCGAATACGGGAGAAAACTCGGGTTAG 530
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 476 TCTACGGCTCTTCTGATCATAGAGCATCGGCTATCGAATACGGGAGAAAACTCGGGTTGG 535
Query 531 GTGGGGATGATGATGATACTAAACAGGATGACACTTCTAGCTCATTTGGTGTTGATGATG 590
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 536 GTGGGGATGATGATGATACTAAACAGGATGATACTTCTAGCTCATTTGGTGTTGATGATG 595
Query 591 GTTTCACTCCGAGAAGTTTTCCTGTGTGTGATGATCGACATTCGGAGCTTATTCCTTGCT 650
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 596 GTTTCACGCCGAGAAGTTTTCCTGTGTGTGATGATCGGCATTCGGAGCTTATTCCTTGCT 655
Query 651 TAGATAGGAATCTTATATACCAAATGAGATTGAAGCTGGATTTGTCTTTGATGGAGCATT 710
|||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 656 TAGACCGGAATCTCATATACCAAATGAGATTGAAGCTGGATTTGTCTTTGATGGAGCATT 715
Query 711 ATGAACGTCATTGTCCTCCTCCTGAGAGACGATTCAATTGCTTGATTCCGCCTCCTAATG 770
||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| ||||
Sbjct 716 ATGAACGTCATTGTCCTCCTCCTGAAAGACGATTTAATTGCTTGATTCCTCCTCCAAATG 775
Query 771 GATATAAGGTTCCGATTAAATGGCCAAAAAGCAGAGATGAAGTGTGGAAAGTGAACATAC 830
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 776 GATATAAGGTTCCAATTAAATGGCCAAAAAGCAGAGATGAAGTGTGGAAAGTGAACATAC 835
Query 831 CTCATACTCATCTTGCACATGAGAAGTCTGACCAAAACTGGATGGTTGTCAAAGGAGATA 890
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 836 CTCATACTCATCTTGCTCATGAGAAGTCTGACCAAAACTGGATGGTTGTCAAAGGAGATA 895
Query 891 AGATTAATTTCCCTGGTGGAGGCACACATTTTCATTATGGTGCTGATAAGTATATTGCAT 950
||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 896 AGATTAATTTCCCAGGCGGAGGCACACATTTTCACTATGGGGCTGATAAGTATATTGCAT 955
Query 951 CGATGGCAAATATGCTTAACTATCCTAACAACGTGCTGAACAACGGTGGAAGGCTAAGGA 1010
||||||||||||||||||||| ||| || ||||| ||||||| ||||||||||||||||
Sbjct 956 CGATGGCAAATATGCTTAACTTTCCGAATAACGTTTTGAACAATGGTGGAAGGCTAAGGA 1015
Query 1011 CGGTTTTCGATGTTGGTTGTGGTGTTGCGAGTTTTGGAGGTTATCTTTTATCATCGGATA 1070
| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 1016 CAGTTTTTGATGTTGGTTGTGGTGTTGCGAGCTTTGGAGGTTATCTTTTATCATCAGATA 1075
Query 1071 TTCTCACAATGTCCTTGGCTCCAAATGATGTGCATCAGAACCAAATCCAATTTGCTCTTG 1130
|||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1076 TTCTGGCAATGTCCTTAGCTCCAAATGATGTGCATCAGAACCAAATCCAATTTGCTCTTG 1135
Query 1131 AGAGAGGGATTCCTGCCTCCCTCGGTGTTTTAGGGACAAAGAGGCTCCCATACCCAAGCA 1190
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1136 AGAGAGGGATTCCTGCCTCCCTCGGTGTTTTAGGGACAAAGAGACTCCCATACCCAAGCA 1195
Query 1191 GATCTTTTGAACTTTCTCACTGTTCACGTTGCAGAATCGATTGGCTACAAAGAGACGGGA 1250
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 1196 GATCTTTTGAACTTGCTCACTGTTCACGTTGCAGAATCGATTGGCTTCAAAGAGATGGGA 1255
Query 1251 TTCTTCTTCTCGAGCTAGACAGAGTACTTAGACCTGGTGGTTATTTTGCATATTCATCTC 1310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256 TTCTTCTTCTCGAGCTAGACAGAGTACTTAGACCTGGTGGTTATTTTGCATATTCATCTC 1315
Query 1311 CAGAGGCATATGCACAAGATGAAGAGGATCTTAGAATCTGGAGAGAAATGAGTGCTCTTG 1370
|||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 1316 CAGAGGCATATGCACAAGATGAAGAGGACCTCCGAATCTGGAGAGAAATGAGTGCTCTTG 1375
Query 1371 TGGAGCGCATGTGTTGGAAGATCGCGGCAAAAAGGAATCAAACTGTTATTTGGCAGAAAC 1430
||||||| ||||||||||||||||||||||||||||| ||||||||||||||| | ||||
Sbjct 1376 TGGAGCGTATGTGTTGGAAGATCGCGGCAAAAAGGAACCAAACTGTTATTTGGGAAAAAC 1435
Query 1431 CTTTGACAAATGATTGTTATCTAGAAAGAGAACCTGGAACTCAGCCTCCTCTTTGCCGTT 1490
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1436 CTTTGACAAATGATTGTTATCTGGAAAGAGAACCTGGAACTCAGCCTCCTCTTTGCCGTT 1495
Query 1491 CTGATAATGACCCTGATGCTGTGTGGGGCGTAAACATGGAAGCTTGCATTACTTCTTACA 1550
|||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 1496 CTGATAATGATCCTGATGCTGTGTGGGGCGTAAACATGGAAGCCTGCATTACATCTTACA 1555
Query 1551 GTGACCATGACCACAAAACCAAGGGAAGTGGATTAGCTCCATGGCCAGCTCGGTTAACCT 1610
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1556 GTGACCATGACCACAAAACCAAGGGAAGTGGATTAGCTCCATGGCCGGCTCGGTTAACCT 1615
Query 1611 CTCCTCCTCCCAGACTTGCTGATTTTGGATATTCAACGGGCATGTTTGAGAAGGACACGG 1670
|||||||||| || ||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 1616 CTCCTCCTCCTAGGCTTGCTGATTTTGGATATTCAACTGGCATGTTCGAGAAGGACACGG 1675
Query 1671 AACTTTGGAGGCAGAGAGTAGATACTTATTGGGATCTCTTGAGTCCAAGAATCGAATCAG 1730
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1676 AACTTTGGAGGCAAAGAGTAGATACTTATTGGGATCTCTTGAGTCCTAGAATCGAATCAG 1735
Query 1731 ATACAGTGAGGAACATAATGGACATGAAAGCAAGCATGGGCTCTTTTGCTGCTGCTCTGA 1790
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1736 ATACAGTGAGGAACATAATGGACATGAAAGCAAGCATGGGCTCCTTTGCTGCTGCTCTGA 1795
Query 1791 AAGAAAAAGATGTCTGGGTAATGAATGTTGTTCCTGAGGACGGACCTAACACGCTTAAAC 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1796 AAGAAAAAGATGTCTGGGTAATGAATGTTGTTCCTGAGGACGGACCTAACACGCTTAAAC 1855
Query 1851 TGATATATGACAGAGGTTTAATGGGCGCGGTTCATAGCTGGTGTGAAGCATTCTCGACAT 1910
||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct 1856 TGATATATGACAGAGGTCTAATGGGCGCAGTTCATAGCTGGTGTGAAGCATTCTCGACAT 1915
Query 1911 ATCCAAGGACATATGATCTCCTCCATGCTTGGGATATTATATCGGATATCAAGAAAAAAG 1970
|||| || || ||||||||||||||||||||||| || || ||||||||||| |||||||
Sbjct 1916 ATCCGAGAACCTATGATCTCCTCCATGCTTGGGACATCATCTCGGATATCAATAAAAAAG 1975
Query 1971 GATGTAGTGAAGTGGATTTGTTACTGGAGATGGATCGAATACTGCGCCCGAGCGGGTTTA 2030
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1976 GGTGTAGTGAGGTGGATTTGTTACTGGAGATGGATCGAATACTGCGCCCGAGCGGGTTTA 2035
Query 2031 TAATCATAAGGGATAAACAAAGAGTGGTGGATTTTGTGAAGAAGTATCTAAAGGCATTGC 2090
||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||
Sbjct 2036 TAATCATAAGGGATAAACAGAGAGTGGTGGATTTGGTTAAGAAGTATCTAAAGGCATTGC 2095
Query 2091 ATTGGGAAGAAGTAGGTACCAAGACAGACTCAGATTCAGATCAAGATTCAGACAATGTTG 2150
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2096 ATTGGGAAGAAGTAGGGACCAAGACAGATTCAGATTCAGATCAAGATTCAGACAATGTTA 2155
Query 2151 TATTCATTGTCCAGAAGAAGCTGTGGTTGACTAGTGAAAGCCTTAGAGATATGGAGTGAT 2210
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2156 TATTCATTGTTCAGAAGAAGTTGTGGTTGACTAGTGAAAGCCTTAGAGATATGGAGTGAT 2215
Query 2211 GAG-TAAGCCACACGATACACAAAAATTACGACCAATGATCATACAACCAACAAATTTCA 2269
|| |||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct 2216 GAAATAAGCCACACCATACACAAACATTACGACCAATGATCATACAACCAACGAATTTCA 2275
Query 2270 TTATTGTAGTAGCAACATTATTTATTAACGTTGttttta-atttttttAATTATTGTATC 2328
||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 2276 TTATTGTAG---CAACATTATTTATTAACGTTGTTTTTTTATTTTTTTAATTATTGT-TC 2331
Query 2329 TTTCTTA--CATTCTTATAAGTGATGTTGTTTGTATGATTTTGGTAGAGAAGAGAAGACA 2386
||||||| |||||||| || |||||||||||||||||||||||||||||| |
Sbjct 2332 TTTCTTATACATTCTTA---GTAATGTTGTTTGTATGATTTTGGTAGAGAAGA-----CT 2383
Query 2387 CGTATAAGTAAAGAACGATA 2406
|||||||||||||| |||||
Sbjct 2384 CGTATAAGTAAAGATCGATA 2403
> Ahg479845 jgi|Araly1|479845|fgenesh2_kg.3__2546__AT3G23300.1
Length=2317
Score = 2045 bits (1107), Expect = 0.0
Identities = 1620/1867 (87%), Gaps = 38/1867 (2%)
Strand=Plus/Plus
Query 372 ATAAGAAGGCAATGAAAGGAAGATCAGATGGAGGGCAA-AAGAAGCGGGTGATTGCTTTG 430
||||| ||| |||| ||| |||||||| |||||| || ||||||| |||||||| |||
Sbjct 229 ATAAGGCGGCGATGAGAGGGAGATCAGACGGAGGG-AAGAAGAAGCCGGTGATTGTTTTA 287
Query 431 GTTTGCGTTGCAGCGGTAGTTCTTGTTTTCGTATATCTGTTCTACGGCTCTTCTGATCAT 490
|| ||||||||| | ||||| |||||||| |||||||| |||| || || ||| | |||
Sbjct 288 GTCTGCGTTGCATCAGTAGTACTTGTTTTTGTATATCTCTTCTTTGGTTCATCTAACCAT 347
Query 491 AGAGCATCGGCTATCGAATACGGGAGAAAACTCGGGTTAG-GTGG-G--GATGATGATGA 546
| |||||| ||||| || || || || ||||| || || | |||| | |||||||||||
Sbjct 348 AAAGCATCAGCTATTGAGTATGGAAGGAAACTTGGATT-GAGTGGAGATGATGATGATGA 406
Query 547 TACTA--AA-CAGGATGACAC-T-T-CTAGCTC--ATT-TG--G-TG-TTGATG--ATGG 591
|| || || | ||||| || | | ||||||| || || | | || | | ||||
Sbjct 407 TAGTATCAAGAAAGATGATACTTCTACTAGCTCTTTTTATGTAGAAGATTTAGGCAATGG 466
Query 592 TTTCACTCCGAGAAGTTTTCCTGTGTGTGATGATCGACATTCGGAGCTTATTCCTTGCTT 651
|||||| || ||||| ||||||||||||||||||||| | ||||||||||||||||| ||
Sbjct 467 TTTCACACCTAGAAGCTTTCCTGTGTGTGATGATCGATACTCGGAGCTTATTCCTTGTTT 526
Query 652 AGATAGGAATCTTATATACCAAATGAGATTGAAGCTGGATTTGTCTTTGATGGAGCATTA 711
||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||
Sbjct 527 AGATAGGAATCTTATTTATCAAATGAGATTGAAGCTTGATTTGTCTTTGATGGAGCATTA 586
Query 712 TGAACGTCATTGTCCTCCTCCTGAGAGACGATTCAATTGCTTGATTCCGCCTCCTAATGG 771
|||||||||||||||||||||||| || || || |||||||||||||| |||||| |||
Sbjct 587 TGAACGTCATTGTCCTCCTCCTGAAAGGCGGTTTAATTGCTTGATTCCTCCTCCTCCTGG 646
Query 772 ATATAAGGTTCCGATTAAATGGCCAAAAAGCAGAGATGAAGTGTGGAAAGTGAACATACC 831
||||||| |||| || || ||||| ||||| ||||||||||| |||||||||||||| ||
Sbjct 647 ATATAAGATTCCAATCAAGTGGCCGAAAAGTAGAGATGAAGTTTGGAAAGTGAACATTCC 706
Query 832 TCATACTCATCTTGCACATGAGAAGTCTGACCAAAACTGGATGGTTGTCAAAGGAGATAA 891
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 707 TCATACTCATCTTGCGCATGAGAAGTCTGACCAAAACTGGATGGTTGTTAAAGGAGAGAA 766
Query 892 GATTAATTTCCCTGGTGGAGGCACACATTTTCATTATGGTGCTGATAAGTATATTGCATC 951
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 767 AATTAATTTCCCTGGTGGAGGCACACATTTTCATTATGGTGCTGATAAGTATATTGCATC 826
Query 952 GATGGCAAATATGCTTAACTATCCTAACAACGTGCTGAACAACGGTGGAAGGCTAAGGAC 1011
||||||||||||||||||| ||| |||||||| ||||||| || |||||||| |||||
Sbjct 827 AATGGCAAATATGCTTAACTTTCCGAACAACGTTTTGAACAATGGGGGAAGGCTGAGGAC 886
Query 1012 GGTT-TTCGATGTTGGTTGTGGTGTTGCGAGTTTTGGAGGTTATCTT-TTATCATCGGAT 1069
|| || ||||||||||| |||||||| || ||||||||||||||| || |||| ||
Sbjct 887 ATTTCTT-GATGTTGGTTGCGGTGTTGCTAGCTTTGGAGGTTATCTTCTTG-CATCAGAA 944
Query 1070 ATTCTCACAATGTCCTTGGCTCCAAATGATGTGCATCAGAACCAAATCCAATTTGCTCTT 1129
||| | || ||||||||||| || |||||||| |||||||||||||| || |||||||||
Sbjct 945 ATTATGACGATGTCCTTGGCACCTAATGATGTTCATCAGAACCAAATTCAGTTTGCTCTT 1004
Query 1130 GAGAGAGGGATTCCTGCCTCCCTCGGTGTTTTAGGGACAAAGAGGCTCCCATACCCAAGC 1189
||||||||||||||||| | ||| || ||| ||||||| |||||||||||||||||||||
Sbjct 1005 GAGAGAGGGATTCCTGCATACCTTGGCGTTCTAGGGACCAAGAGGCTCCCATACCCAAGC 1064
Query 1190 AGATCTTTTGAACTTTCTCACTGTTCACGTTGCAGAATCGATTGGCTACAAAGAGACGGG 1249
||||| ||||||||| |||||||||| |||||| ||||||||||||| |||||||| ||
Sbjct 1065 AGATCCTTTGAACTTGCTCACTGTTCGCGTTGCCGAATCGATTGGCTTCAAAGAGATGGT 1124
Query 1250 ATTCTTCTTCTCGAGCTAGACAGAGTACTTAGACCTGGTGGTTATTTTGCATATTCATCT 1309
||||||||||||||||||||||| || || ||||||||||| |||||||||||||| |||
Sbjct 1125 ATTCTTCTTCTCGAGCTAGACAGGGTGCTAAGACCTGGTGGCTATTTTGCATATTCGTCT 1184
Query 1310 CCAGAGGCATATGCACAAGATGAAGAGGATCTTAGAATCTGGAGAGAAATGAGTGCTCTT 1369
||||| ||||||||||||||||||||||| || ||||| |||||||||||||||||||||
Sbjct 1185 CCAGAAGCATATGCACAAGATGAAGAGGACCTCAGAATATGGAGAGAAATGAGTGCTCTT 1244
Query 1370 GTGGAGCGCATGTGTTGGAAGATCGCGGCAAAAAGGAATCAAACTGTTATTTGGCAGAAA 1429
|||| ||| |||||||||| ||| || |||||||||||||||||||| |||||||| |||
Sbjct 1245 GTGGGGCGTATGTGTTGGACGATAGCTGCAAAAAGGAATCAAACTGTAATTTGGCAAAAA 1304
Query 1430 CCTTTGACAAATGATTGTTATCTAGAAAGAGAACCTGGAACTCAGCCTCCTCTTTGCCGT 1489
||||||||||||||||||||| | | ||||||||||||||| || |||||||||||| |
Sbjct 1305 CCTTTGACAAATGATTGTTATTTGGGAAGAGAACCTGGAACCCAACCTCCTCTTTGCAAT 1364
Query 1490 TCTGATAATGACCCTGATGCTGTGTGGGGCGTAAACATGGAAGCTTGCATTACTTCT-TA 1548
||||||| |||||| |||||||||| || |||||||||||||| ||||||||| | ||
Sbjct 1365 TCTGATAGTGACCCCGATGCTGTGTATGGTGTAAACATGGAAGCCTGCATTACT-CAATA 1423
Query 1549 CAGTGACCATGACCACAAAACCAAGGGAAGTGGATTAGCTCCATGGCCAGCTCGGTTAAC 1608
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 1424 CAGTGACCATGACCACAAAACCAAGGGAAGTGGATTGGCTCCATGGCCAGCTCGATTAAC 1483
Query 1609 CTCTCCTCCTCC-CAGACTTGCTGATTTTGGATATTCAACGGGCATGTTTGAGAAGGACA 1667
|||||||||||| | | || ||||||||||| || || || | |||||||||||||||||
Sbjct 1484 CTCTCCTCCTCCTCGG-CTAGCTGATTTTGGCTACTCCACTGACATGTTTGAGAAGGACA 1542
Query 1668 CGGAA-CTTTGGAGGCAGAGAGTAGATACTTATTGGGATCTCTTGAGTCC-AAGAAT-CG 1724
| ||| ||| |||||||||| ||||||||||||||||||||||||||||| || ||| |
Sbjct 1543 CAGAAACTT-GGAGGCAGAGGGTAGATACTTATTGGGATCTCTTGAGTCCTAA-AATTC- 1599
Query 1725 AATCAGATACAGTGAGGAACATAATGGACATGAAAGCAAGCATGGGCTCTTTTGCTGCTG 1784
||||||| || |||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct 1600 AATCAGACACTGTGAGGAACATAATGGACATGAAAGCAAACATGGGTTCTTTTGCTGCTG 1659
Query 1785 CTCTGAAAGAAAAAGATGTCTGGGTAATGAATGTTGTTCCTGAGGACGGACCTAACACGC 1844
||||||||||||||||||| ||||| ||||||||||| ||||| |||||||| |||||||
Sbjct 1660 CTCTGAAAGAAAAAGATGTTTGGGTTATGAATGTTGTCCCTGAAGACGGACCAAACACGC 1719
Query 1845 TTAAACTGATATATGACAGAGGTTTAATGGGCGCGGTTCATAGCTGGTGTGAAGCATTCT 1904
||||||||||||| |||||||| | |||||||| |||||||||||||||||||| ||||
Sbjct 1720 TTAAACTGATATACGACAGAGGCCTGATGGGCGCTGTTCATAGCTGGTGTGAAGCGTTCT 1779
Query 1905 CGACATATCCAAGGACATATGATCTCCTCCATGCTTGGGATATTATATCGGATATCAAGA 1964
| || || || ||||| |||||| | ||||| ||||||||||| ||||| ||||||| ||
Sbjct 1780 CAACTTACCCGAGGACTTATGATTTACTCCACGCTTGGGATATCATATCTGATATCAGGA 1839
Query 1965 AAAAAGGATGTAGTGAAGTGGATTTGTTACTGGAGATGGATCGAATACTGCGCCCGAGCG 2024
| | ||| ||||||| || ||||||| | ||||||||||||| || || || || ||||
Sbjct 1840 AGAGAGGTTGTAGTGCAGAGGATTTGCTGTTGGAGATGGATCGTATTCTTCGTCCAAGCG 1899
Query 2025 GGTTT-ATAATCATAAGGGATAAACAAAGAGTGGTGGATTTTGTGAAGAAGTATCTAAAG 2083
| ||| ||| |||||||||| |||||| || || || |||||||||||||||| |||
Sbjct 1900 G-TTTCATACTCATAAGGGACAAACAATCCGTAGTCGACCTTGTGAAGAAGTATCTCAAG 1958
Query 2084 GCATTGCATTGGGAAGAAGTAGGTACCAAGACAGACTCAGATTCAGATCAAGATTCAGAC 2143
|| ||||||||||||| ||| | |||||||||| |||||| ||||| ||||| ||||||
Sbjct 1959 GCTTTGCATTGGGAAGCAGTTGAAACCAAGACAGCCTCAGAATCAGACCAAGACTCAGAC 2018
Query 2144 AATGTTGTATTCATTGTCCAGAAGAAGCTGTGGTTGACTAGTGAAAGCCTTAGAGATATG 2203
||||| || |||||||||||||||| ||||||||||| ||||||||||| |||||| ||
Sbjct 2019 AATGTCATACTCATTGTCCAGAAGAAACTGTGGTTGACAAGTGAAAGCCTCAGAGATTTG 2078
Query 2204 GAGTGAT 2210
|||||||
Sbjct 2079 GAGTGAT 2085
> Ahg470420 jgi|Araly1|470420|fgenesh2_kg.1__374__AT1G04430.1
Length=2099
Score = 959 bits (519), Expect = 0.0
Identities = 1196/1521 (79%), Gaps = 54/1521 (4%)
Strand=Plus/Plus
Query 604 AAGTTTTCCTGTGTGTGATGATCGACATTCGGAGCTTATTCCTTGCTTAGATAGGAATCT 663
|||||||||||| ||||||||||| || ||||| | || |||||||||||||||||| |
Sbjct 471 AAGTTTTCCTGTTTGTGATGATCGGCACTCGGAAATCATCCCTTGCTTAGATAGGAAT-T 529
Query 664 T-ATATACCAAATGAGATTGAAGCTGGATTTGTCTTTGATGGAGCATTATGAACGTCATT 722
| || ||||||||||| |||||||| ||| | ||| | ||||| ||||||||||| ||||
Sbjct 530 TCATCTACCAAATGAGGTTGAAGCTTGATCTATCTCTAATGGAACATTATGAACGGCATT 589
Query 723 GTCCTCCTCCTGAGAGACGATTCAATTGCTTGATTCCGCCTCCTA-ATGGATATAAGGTT 781
|||||||||| || ||||| || || || |||||||| || || | ||| || ||||||
Sbjct 590 GTCCTCCTCCCGAAAGACGGTTTAACTGTTTGATTCCTCCACC-ATCTGGCTACAAGGTT 648
Query 782 CCGATTAAATGGCCAAAAAGCAGAGATGAAGTGTGGAAAGTGAACATACCTCATACTCAT 841
|| ||||| ||||| || || ||||||||||||||||||| ||||||||||| |||||
Sbjct 649 CCTATTAAGTGGCCTAAGAGTAGAGATGAAGTGTGGAAAGCCAACATACCTCACACTCAC 708
Query 842 CTTGCACATGAGAAGTCTGACCAAAACTGGATGGTTGTCAAAGGAGATAAGATTAATTTC 901
|| ||| | ||||||||||| || || |||||||||| ||||| || || ||| |||
Sbjct 709 CTCGCAAAAGAGAAGTCTGATCAGAATTGGATGGTTGAGAAAGGCGAGAAAATTTCTTTT 768
Query 902 CCTGGTGGAGGCACACATTTTCATTATGGTGCTGATAAGTATATTGCATCGATGGCAAAT 961
|| ||||||||||| ||||| ||||| || |||||||| || |||||||| || ||||||
Sbjct 769 CCAGGTGGAGGCACTCATTTCCATTACGGAGCTGATAAATACATTGCATCAATCGCAAAT 828
Query 962 ATGCTTAACTATCCTAACAACGTGCTGAACAACGGTGGAAGGCTAAGGACGGTT-TTCGA 1020
|||||||| | | | ||| | || ||||| | | || || |||| |||||| || ||
Sbjct 829 ATGCTTAATTTTTCGAACGATGTACTGAATGATGAAGGGAGATTAAGAACGGTTCTT-GA 887
Query 1021 TGTTGGTTGTGGTGTTGCGAGTTTTGGAGGTTATCTTTTATCATCGGATATTCTCACAAT 1080
||| || || || |||||||||||||||| ||| ||| | |||| ||||| ||||||||
Sbjct 888 TGTCGGATGCGGAGTTGCGAGTTTTGGAGCTTACCTTCTCGCATCTGATATACTCACAAT 947
Query 1081 GTCCTTGGCTCCAAATGATGTGCATCAGAACCAAATCCAATTTGCTCTT-GAGAGAGGGA 1139
||| || || || |||||||| || |||||||||||||| ||||| || || ||||| |
Sbjct 948 GTCATTAGCCCCTAATGATGTTCACCAGAACCAAATCCAGTTTGC-ATTAGAAAGAGGAA 1006
Query 1140 TTCCTGCCTCCCTCGGTGTTTTAGGGA-CAAAGAGGCTCCCATACCCAAGCAGATCTTTT 1198
| || || | || ||||||||||| | |||| ||||| || ||||| |||||||| ||
Sbjct 1007 TCCCCGCTTATCTTGGTGTTTTAGGTACCAAA-AGGCTTCCTTACCCGAGCAGATCATTC 1065
Query 1199 GAACTTTCTCACTGTTCACGTTGCAGAATCGATTGGCTACAAAGAGACGGGA-TTCTTCT 1257
|| || |||| ||||| || || || ||||||||||| ||||||||| ||| | |||||
Sbjct 1066 GAGCTAGCTCATTGTTCTCGATGTAGGATCGATTGGCTTCAAAGAGAC-GGACTCCTTCT 1124
Query 1258 TCTCGAGCTAGA-CAGAGTACTTAGACCTGGTGGTTATTTTGCATATTCATCTCCAGAGG 1316
||| ||||| || | | ||||| ||||| || |||||||| || ||||| ||||| || |
Sbjct 1125 TCTTGAGCTCGATC-GCGTACTAAGACCGGGAGGTTATTTCGCTTATTCGTCTCCTGAAG 1183
Query 1317 CATATGCACAAGATGAAGAGGATCTT-AGAATCTGGAGAGAAATGAGTGCTCTTGTGGAG 1375
| || || ||||||||||| || || | |||||||| ||| |||||||||||||| ||
Sbjct 1184 CTTACGCGCAAGATGAAGAAAAT-TTGAAAATCTGGAAAGAGATGAGTGCTCTTGTTGAA 1242
Query 1376 CGCATGTGTTGGAAG-ATCGCGGCAAAAAGGAATCAAACTGTTATTTGGCAGAAACCTTT 1434
| ||||||||| || ||||| | ||||| || |||||||| ||||||||||||| ||
Sbjct 1243 AGAATGTGTTGG-AGAATCGCTGTTAAAAGAAACCAAACTGTGGTTTGGCAGAAACCGTT 1301
Query 1435 GACAAATGATTGTTATC-TAGAAAGAGAACCTGGAACTCAGCCTCCTCTTTGCCGTTCTG 1493
|| ||||| ||||| | | || ||||| || || || ||||||||||| || || || |
Sbjct 1302 GAGTAATGACTGTTA-CTTGGAGAGAGAGCCCGGGACACAGCCTCCTCTCTGTCGCTCAG 1360
Query 1494 ATAATGACCCTGATGCTGTGTG-GGGCGTAAAC-ATGGAAGCTTGCATTACTTCTTACAG 1551
|| ||| |||||||| || || ||| || | |||||||||||||| ||| |||||
Sbjct 1361 ATGCTGATCCTGATGCGGT-TGCGGGTGT-GGCAATGGAAGCTTGCATCACTCCTTACTC 1418
Query 1552 TGACCATGACCACAAAACCAAGGGAAGTGGATTAGCTCCATGGCCAGCTCGGTTAACCTC 1611
| |||||||| ||||||||||||||||| |||||||| ||||||||| |||| || ||
Sbjct 1419 CAAGCATGACCATAAAACCAAGGGAAGTGGGTTAGCTCCTTGGCCAGCTAGGTTGACTTC 1478
Query 1612 TCCTCCTCCCA-GACTTGCTGATTTTGGATATTCAACGGGCATGTTTGAGAAGGACACGG 1670
| | ||| ||| | ||||| ||||| || |||||||| | ||||||||||||||||||||
Sbjct 1479 TTCACCT-CCACGTCTTGCGGATTTCGGTTATTCAACCGACATGTTTGAGAAGGACACGG 1537
Query 1671 AACTTTGGAGGCAGAGA-GTAGATACTTATTGGGATCTCTTGA-GTC--CAAGAA-TCGA 1725
||||||||| || | | || || | ||| ||| || | | || ||| ||| || | ||
Sbjct 1538 AACTTTGGAAACA-ACAAGTGGACAGTTACTGGAAT-T-T-GATGTCATCAA-AAGT-GA 1591
Query 1726 A-TCAGATACAGTGAGGAACATAATGGACATGAAAGCA-AGCATGGGCTCTTTTGCTGCT 1783
| ||| | || |||||||||||||||||||||||||| | |||||| ||||| || |||
Sbjct 1592 AATCAAACACTGTGAGGAACATAATGGACATGAAAGCTCA-CATGGGTTCTTTCGCAGCT 1650
Query 1784 GCTCTGAAAGAAAAAGATGTCTGGGTAATGAATGTTGT-TCCTGAGGACGGACCTAACAC 1842
||||| ||||| |||||||||||||| ||||| ||| | || | |||||| || |||||
Sbjct 1651 GCTCTTAAAGACAAAGATGTCTGGGTGATGAACGTTATCTC-TCCGGACGGTCCCAACAC 1709
Query 1843 GCTTAAACTGATATATGACAGAGGTTTAAT-GGGCGCGGTTCATAGCTGGTGTGAAGCAT 1901
|| |||||||| || ||| | |||||||| ||| | ||||| ||||||||| || |
Sbjct 1710 TCTAAAACTGATCTACGACCGCGGTTTAATCGGGA-CAAATCATAACTGGTGTGAGGCTT 1768
Query 1902 TCTCGACATATCCAAGGACATATGATCTCCTCCATGCTTGGG-A-TATTATATCGGATAT 1959
|||| ||||||||| | ||||| ||||| | || || ||| | |||| | || || ||
Sbjct 1769 TCTCTACATATCCACGAACATACGATCTGTTGCACGCGTGGTCAGTATT-T-TCAGACAT 1826
Query 1960 CAAGAAA--AAAGGATGTAGTGAAGTGGATTTGTTACTGGAGATGGATCGAATACTGCGC 2017
|| ||| |||||||| || | || |||| | ||| | ||||||||||| || || |
Sbjct 1827 -AA-AAAGCAAAGGATGCAGCGCAGAGGATCTATTAATCGAGATGGATCGGATTCTTAGA 1884
Query 2018 CCGAGCGGGTTTA-TAATCATAAGGGATAAACAAAGAGTGGTGGATTTTGTGAAGAAGTA 2076
|| | | || || | ||||| || ||||| ||||| || || || | | ||||||||
Sbjct 1885 CCTA-CAGGATTCGTTATCATCAGAGATAAGCAAAGTGTAGTTGAATCAATCAAGAAGTA 1943
Query 2077 TCTAAAGGCATTGCATTGGGA 2097
||| |||| |||||||||||
Sbjct 1944 TCTGCAGGCTTTGCATTGGGA 1964
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 91111866040
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5