BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G14610.1
Length=2649
Score E
Sequences producing significant alignments: (Bits) Value
Ahg330052 jgi|Araly1|330052|fgenesh1_pm.C_scaffold_7002279 1275 0.0
Ahg920055 jgi|Araly1|920055|scaffold_101336.1 1131 0.0
Ahg334514 jgi|Araly1|334514|fgenesh1_pg.C_scaffold_1001079 942 0.0
Ahg312255 jgi|Araly1|312255|fgenesh1_pm.C_scaffold_1001035 695 0.0
> Ahg330052 jgi|Araly1|330052|fgenesh1_pm.C_scaffold_7002279
Length=2166
Score = 1275 bits (690), Expect = 0.0
Identities = 798/851 (94%), Gaps = 4/851 (0%)
Strand=Plus/Plus
Query 281 AGGTTGAGATAGAGAGGTTGTGTTTTTGTGGGTTTTGCTCCAAAAGTTTTGGAAAGAGCT 340
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 200 AGGTTGAGATAAAGAGGTTGTGTTTTTGTGGGTTTTGCTCCAAAAGTTTTGGAAAGAGCT 259
Query 341 ATCATTATGGGAAAATGGTTAGCGTGATGTTGAAGGAAGTTGAGAATCTCTCTTCTCGTG 400
|| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||
Sbjct 260 ATGGTTATGGGAAAATGGTTAGCTTGATGTTGAAGGAAGTTGAGAGTCTCTCTTCTCATG 319
Query 401 GAGTATTTGATGTGGTGACTGAGGAAAATCTGGTAGCTCAAGTTGAGGAGATGCCTATTC 460
||| |||||||||||||||||||| | |||||| |||||| ||||||||||||||||
Sbjct 320 GAGAATTTGATGTGGTGACTGAGGTTGCTATGGTAGTTCAAGTGGAGGAGATGCCTATTC 379
Query 461 AATCCACAGTTGTTGGTCAAGAGACAATGCTTGAAAGGGTTTGGAACACTCTCATGAAAG 520
|||| ||||||||||||||||||||||||||||||||| |||||| |||| |||||||
Sbjct 380 AATCTGTAGTTGTTGGTCAAGAGACAATGCTTGAAAGGGTGTGGAACTCTCTTATGAAAG 439
Query 521 ATGGATTCAAGATCATGGGTTTATATGGAATGGGTGGAGTGGGAAAAACCACGCTTCTTA 580
||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||| |
Sbjct 440 ATGGATTCAAGATTATGGGTTTGTATGGAATGGGTGGAGTGGGGAAAACTACGCTTCTCA 499
Query 581 CGCAAATCAACAAGAAGTTTTCTGAAACAGATGGTGGATTTGATATTGTGATGTGGGTTG 640
||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct 500 CGCAAATCAACAATAAGTTTTCTGAAATGGATTGTGGATTTGATATTGTGATGTGGGTTG 559
Query 641 TTGTGTCTAAAACCTC-AGAGATCTATAGGATTCAAGAAGACATTGCAAAAAGACTAGGT 699
| |||||||||| ||| |||||||||||||||||||||||| |||||||||||||| |||
Sbjct 560 TCGTGTCTAAAA-CTCTAGAGATCTATAGGATTCAAGAAGATATTGCAAAAAGACTTGGT 618
Query 700 CTTACGGGCGAGGAGTGGGACaaaaaaaaCGAAAACAAGAGAGCCGTTGACATACACAAT 759
||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 619 CTTTCGGGTGAGGAGTGGGACAAAAAAACCGAAAACAAGAGAGCCGTTGACATACACAAT 678
Query 760 GTCCTTAGGAGACATAAATTTGTGTTATTGTTGGATGATATATGGGAGAAAGTGAACTTA 819
|||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 679 GTCCTTAGGAGAAAGAAATTTGTGTTATTGTTGGATGATATATGGGAGAAGGTGAACTTA 738
Query 820 GAATTGGTTGGAGTACCGTATCCAAGTAGAGAAAATGGAAGCATAGTAGCATTTACCACC 879
|||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 739 GAATCGGTTCGAGTACCGTATCCAAGTAGAGAAAATGGAAGCATAGTAGCATTTACCACT 798
Query 880 CGTTCTCGAGATGTTTGTGGGCGTATGGGAGTCGATGACCCGATGCAAGTTAGTTGTTTG 939
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct 799 CGTTCTCGAGATGTTTGTGGGCGTATGGGAGTCGATGACCTGATGAAAGTTAGTTGTTTG 858
Query 940 GAACCTGAAGATGCTTGGGATTTGTTTCAAAAC-AAAGTAGGAGAAAACACTTTGAAAAG 998
||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct 859 GAACCTGAAGAAGCTTGGGATTTGTTTC-AAACGAAAGTAGGAGAAAACACTTTGAAAAG 917
Query 999 CCATCCGGATATTCCTGAACTTGCAAAACAAGTCGCTGAAAAATGTCGTGGTCTACCATT 1058
||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct 918 CCATCCGGACATTCCTGAACTTGCAAAACAAGTCGCTGAAAAATGTCGTGGTCTGCCACT 977
Query 1059 AGCACTTAATGTCATTGGAGAAACTATGGCATGCAAAAGCACAGTTCAAGAATGGCGTCA 1118
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 978 AGCGCTCAATGTCATTGGAGAAACTATGGCATGCAAAAGCACAGTTCAAGAATGGCGTCA 1037
Query 1119 CGCGATTGATG 1129
|||||||||||
Sbjct 1038 CGCGATTGATG 1048
Score = 885 bits (479), Expect = 0.0
Identities = 536/564 (95%), Gaps = 2/564 (0%)
Strand=Plus/Plus
Query 2075 AGCTTATAGAGGTTGAGGAAGAATCTTTCAAAATATTAACTTTTCCAAGCATGTGTAATA 2134
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct 1595 AGCTTATAGAGGTTGAGGAAGAATCATTCAAAATATTAACTGTTCCAAGCATGTGTAATA 1654
Query 2135 TCCGTCGAATTGGCATATGGAAGTGTGGAATGAAGGAGATAAAAGTCGAGATGAGAACAT 2194
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1655 TCCGTCGAATTGGCATATGGAAGTGTGGAATGAAGGAGATAAAGGTCGAGATGAGAACAT 1714
Query 2195 CATCATGCTTCTCTAGCCTCTCCAAAGTCGTTATAGGACAATGTGATGGTCTAAAGGAGT 2254
||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||| |
Sbjct 1715 CATCATGCTTCTCTAGCCTTTCCAAAGTAGTTATAGGACAATGCAATGGTCTAAAGGATT 1774
Query 2255 TGACATGGCTATTGTTTGCTCCAAACCTTACTTATCTCGACGCTCGTTTCGCAGAGCAAC 2314
||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||
Sbjct 1775 TGACATGGCTATTGTTTGCTCCAAACCTTACTTATCTATATGTTCGTTTCGCAGAGCAAC 1834
Query 2315 TAGAGGATATAATCAGTGAAGAAAAAGCTGCAAGTGTTACGGACGAGAATGCAAGTATTA 2374
||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||
Sbjct 1835 TAGAGGATATAATCAGTGAAGAAAAAGCTGCAAGTTTTACAGACGAGAATGCAAATATTA 1894
Query 2375 TCATTCCTTTTCAAAAACTAGAATGTCTTAGCTTATCTGATTTACCTAAGCTAAAGAGCA 2434
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1895 TCATTCCTTTTCAAAAACTAGAATGTCTTAGCTTATCTGATTTACCTAAGCTGAAGAGCA 1954
Query 2435 TCTACTGGTCACCATTGTCTTTTCCACGTCTGAGTGAGCTTGCAGTGCAAGAACATTGTC 2494
|||||||| |||| ||||||||||||||||||||||||| || |||||||||||||| |
Sbjct 1955 TCTACTGGACACCCCTGTCTTTTCCACGTCTGAGTGAGCTCGCTGTGCAAGAACATTGCC 2014
Query 2495 CAAAGCTGAAAAAGCTTCCATTGAACTCCAAGAGTGGAACTGCAGG-TGTAGAACTTGTC 2553
||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||
Sbjct 2015 CAAAGCTGAAAAAGCTTCCATTGAATTCCAAGAGTGGAACTGC-GGATGTAGAACTTGTC 2073
Query 2554 GTAAAATACGGCGAAAACAAATGGTTAGAAGGTGTTGAATGGGAAGACAAAGCCACTGAA 2613
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2074 ATAAAATACGGCGAAAACAAATGGTTGGAAGGTGTTGAATGGGAAGACAAAGCCACTGAA 2133
Query 2614 CTACGGTTTTTGGCTACCTGCAAA 2637
|| |||||||||||||||||||||
Sbjct 2134 CTCCGGTTTTTGGCTACCTGCAAA 2157
Score = 532 bits (288), Expect = 4e-150
Identities = 340/366 (93%), Gaps = 0/366 (0%)
Strand=Plus/Plus
Query 1396 GATGGAGGAAGAATGGAAGAAAACGGAAGTGAAAATGCATGACGTGGTTCGTGAGATGGC 1455
||| || |||| |||||||||| | ||||||||||||||||| |||||||||||||||||
Sbjct 1041 GATTGATGAAGGATGGAAGAAAGCAGAAGTGAAAATGCATGATGTGGTTCGTGAGATGGC 1100
Query 1456 TCTATGGATATCATCTGATCTTGGAAAGCATAAAGATCAATGCATTGTGCGAGCCGGTGT 1515
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1101 TCTATGGATATCATCTGATCTTGGAAAGCACAAAGATCAATGTATTGTGCGAGCCGGTGT 1160
Query 1516 TGGGTTACATGCAGTACCGGAAGTGAAGAACTGGAGAGCTGTGAGAAGAATGTCGTTGAT 1575
|||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 1161 TGGGTTACATGCAGTACCGGAAGTGAAGAATTGGAGAGCTGTGAGAAGGCTGTCGTTGAT 1220
Query 1576 GAAAAATGAGCTTGAAAAGATTTTGGGTTGCCCTACATGTCCTCAACTTACAACTCTCCT 1635
||||| ||||||| |||| || |||||||| |||||||||||| ||||||| ||||||||
Sbjct 1221 GAAAACTGAGCTTCAAAACATATTGGGTTGTCCTACATGTCCTGAACTTACGACTCTCCT 1280
Query 1636 CCTCCaaaaaaaCCACAAATTGGTAAATATTTCCGGAGAATTCTTTCGATTCATGCCTAA 1695
||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct 1281 CCTCCAAGAAAACCACAAACTGGTAAATATTTCCGGAGAATTCTTTCGATTTATGCCTAA 1340
Query 1696 CCTTGTCGTATTGGATTTATCATGGAATAGTAGTCTCACTGGATTACCAAAGAAAATATC 1755
|||||| ||||||||||||||||||| ||||||||||| |||||||||||| |||||||
Sbjct 1341 CCTTGTAGTATTGGATTTATCATGGAGTAGTAGTCTCATTGGATTACCAAACCAAATATC 1400
Query 1756 AGAGTT 1761
||||||
Sbjct 1401 AGAGTT 1406
Score = 274 bits (148), Expect = 2e-72
Identities = 175/188 (93%), Gaps = 1/188 (1%)
Strand=Plus/Plus
Query 1828 GTTGAAACAACTAATACATCTGAATTTGGAGTCCATGAAGAGTTTGGAGAGTA-TGCTGG 1886
||||||| ||||||||||| |||||||||||||||||||||| |||| |||| ||| ||
Sbjct 1407 GTTGAAAAAACTAATACATTTGAATTTGGAGTCCATGAAGAGACTGGAAAGTATTGCCGG 1466
Query 1887 GGTATCTAAGTTGTTGAGTTTGAAGACACTGAGACTACAAAAGTCCAAAAAGGCTCTAGA 1946
|||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||
Sbjct 1467 AGTATCTAAGTTGTTGAGTTTGAGGACATTGAGACTACAAAAGTCCAAAAAGGCTGTAGA 1526
Query 1947 TGTGAACTCAGCGAAGGAGCTACAACTCTTAGAACATATAGAAGTTCTAACCATAGATAT 2006
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1527 TGTGAACTCAGCGAAGGAGCTACAACTCTTAGAACATTTAGAAGTTCTAACCATAGATAT 1586
Query 2007 CTTTTCAA 2014
||| ||||
Sbjct 1587 CTTCTCAA 1594
Score = 231 bits (125), Expect = 1e-59
Identities = 165/184 (90%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 40 TTTGTGAATCAGTTCTCTCAATGGTTATGCGTTAGAA-AAGGTTACATTCATAGCCTTCC 98
||||||||||||||||||||||||||||||||||||| ||| ||| ||||| |||||| |
Sbjct 22 TTTGTGAATCAGTTCTCTCAATGGTTATGCGTTAGAAGAAG-TTATATTCACAGCCTTAC 80
Query 99 CGAGAATCTAGCAGCTCTACAAAAAGCCATTGAAGTTCTCAAGACAAA-GCACGATGATG 157
|||||||||||||||| | || |||||||| ||||| ||||||||||| | | |||||||
Sbjct 81 CGAGAATCTAGCAGCTTTGCATAAAGCCATGGAAGTGCTCAAGACAAAAGAA-GATGATG 139
Query 158 TGAAAAGAAGGGTCGATAAAGAAGAATTTCTAGGGCGTCGTCATAGGCTTTCTCAAGTTC 217
||||||||||||| |||| |||||| ||| ||||||||||||| ||| ||||||||||||
Sbjct 140 TGAAAAGAAGGGTTGATAGAGAAGAGTTTATAGGGCGTCGTCAAAGGATTTCTCAAGTTC 199
Query 218 AGGT 221
||||
Sbjct 200 AGGT 203
> Ahg920055 jgi|Araly1|920055|scaffold_101336.1
Length=2692
Score = 1131 bits (612), Expect = 0.0
Identities = 1646/2129 (77%), Gaps = 136/2129 (6%)
Strand=Plus/Plus
Query 1 ATGGGAGGTTGTATCTCGGTCTCGGTGTCATGTGATC-AGTTTGTGAATCAG-TTCTCTC 58
||||||||||||||||| |||||| |||||||||||| || | ||||||||| || ||||
Sbjct 21 ATGGGAGGTTGTATCTCTGTCTCGTTGTCATGTGATCGAG-TAGTGAATCAGATT-TCTC 78
Query 59 AATGGTTATGCGTTA--GAAAAGGTTACATTCATAGCCTTC-CCGAGAATCTAGCAGCTC 115
| || ||||| || | | || ||| ||||||| || || | |||||||| || |||
Sbjct 79 AGTGTTTATGTGTCAGTGGTAA--TTATATTCATAACC-TCTCTGAGAATCTGGCTTCTC 135
Query 116 TACAAAAAGCCATTGAAGTTCTCAAGACAAAGC-ACGATGATGTGAAAAGAAGGGTCGAT 174
| || |||||||| | ||| |||||| | |||| | ||||| ||| || ||||||| |||
Sbjct 136 TGCAGAAAGCCATGGGAGTGCTCAAGGCTAAGCGA-GATGACGTGCAAGGAAGGGTAGAT 194
Query 175 AAAGAAGAATTT-CTAGGGCGTCGTC-ATAGGCTTTCTCAAGTTCAGGTATGGCTTACAA 232
| |||||| ||| || |||| ||||| | |||||| ||||||| |||||||||||||||
Sbjct 195 AGAGAAGAGTTTACT-GGGCATCGTCGA-AGGCTTGCTCAAGTCCAGGTATGGCTTACAC 252
Query 233 ATGTCGTGATTATCGAGAAA--AGGTTCAATGAT-TTGTTTAGTA-ATAAAGAGGTTGAG 288
| || | | ||||| ||| | ||||||||| || |||| | | | | | ||||
Sbjct 253 GTATCCTAACCATCGA-AAACCA-ATTCAATGATCTT-CTTAGCACTTGTA-ACGCTGAG 308
Query 289 ATAGAGAGGTTGTGTTTTTGTGGGTTTTGCTCCAAAAGTTTTGGAAA-GAGCTATCATTA 347
|| | ||||||||| | ||||| |||||||| |||| | || ||| |||||||| |||
Sbjct 309 ATTCAAAGGTTGTGTCTCTGTGGTTTTTGCTCTAAAA-ATATGAAAATGAGCTATCTTTA 367
Query 348 TGGGAAAATG-GTTAGCGTGATGTTGAAGGAAGTTGAGAATCTC-TCTTCTCGTGGAGTA 405
|||||||| | |||| ||| |||||| ||| |||||| |||| | |||| |||| |
Sbjct 368 TGGGAAAA-GAGTTATTGTGTTGTTGAGGGAGGTTGAGGGTCTCAGC-TCTCAAGGAGAA 425
Query 406 TTTGATGTGGTGACTGAGGAAAATCTGGTAGCTCAAGTTGAGGAGATGCCTATTCAATCC 465
||||||||||||||||||| || || | ||||| | ||||| ||| ||||||||||||||
Sbjct 426 TTTGATGTGGTGACTGAGGCAACTCCGATAGCTGAGGTTGAAGAGTTGCCTATTCAATCC 485
Query 466 ACAGTTGTTGGTCAAGAGACAATGCTTGA-AAGGGTTTGGAACACTCTCATGAAAGATGG 524
||| |||||||||| || | ||||| || || ||| |||||| ||| ||| |||||
Sbjct 486 ACAATTGTTGGTCAGGATTCGATGCTCGACAA-GGTATGGAACTGTCTAATGGAAGATAA 544
Query 525 ATTCAAGATCATGGGTTTATATGGAATGGGTGGAGTGGGAAAAACCACGCTTCTTACGCA 584
| || ||| ||||| | ||||| ||||||||||| ||||||||||| ||||| |||||
Sbjct 545 AGTCGGGATTGTGGGTCTGTATGGTATGGGTGGAGTAGGAAAAACCACCCTTCTCACGCA 604
Query 585 AATCAACAAGAAGTTTTCTGAAAC-AGATGGTGGATTTGATATTGTGATGTGGGTTGTTG 643
|||||||| ||||||||| |||| || ||||||||||||| | ||||| |||||||| |
Sbjct 605 GATCAACAATAAGTTTTCT-AAACTAGGTGGTGGATTTGATGTCGTGATATGGGTTGTGG 663
Query 644 TGTCTAAAACCT-C-AGAGAT-CTATAGGATTC-AAGAAGACAT-TGCAAAAAGACTAGG 698
||||||||| | | | || | | ||| ||||| |||||| ||| | |||| ||||||
Sbjct 664 TGTCTAAAA-ATGCAACAG-TAC-ATAAGATTCAAAGAAG-CATCGGGGAAAA-ACTAGG 718
Query 699 TCTT-ACGGGCGAGGAGTGGGACaaaaaaaaCGAAAACAAGAGAGCCGTTGACATACACA 757
||| ||| || |||||||| | |||||| ||||| |||||||| ||||||| ||||
Sbjct 719 CCTTGTTGGG-AAGAAGTGGGACGAGAAAAACAAAAACCAGAGAGCCCTTGACATCCACA 777
Query 758 ATGTCCTTAGGA-GACATAAATTTGTGTTATTGTTGGATGATATATGGGAGAAAGTGAAC 816
| || ||||||| || | || ||||| || |||||||||||||||||||| |||||||||
Sbjct 778 ACGTTCTTAGGAGGA-AGAAGTTTGTCTTGTTGTTGGATGATATATGGGAAAAAGTGAAC 836
Query 817 TTAGAAT-TGGTTGGAGTACCGTATCCAAGTAGAGAAAATGGAAGCATAGTAGCATTTAC 875
||| ||| || ||||||| |||||||| ||| ||||||| ||| ||| ||||||||| ||
Sbjct 837 TTA-AATGTGATTGGAGTCCCGTATCCGAGTGGAGAAAACGGATGCAAAGTAGCATTCAC 895
Query 876 CACCCGTTCTCGA-GATGTTTGTGGGCGTATGGGAGTCGATGACCCGATGCAAGTTAGTT 934
||| |||||| | || |||||||| || ||||| || |||||||||||| |||| ||||
Sbjct 896 CACTCGTTCT-AAGGAAGTTTGTGGACGCATGGGGGTAGATGACCCGATGGAAGTCAGTT 954
Query 935 GTTTGGA-ACCTGAAGATGCTTGGGATTTGTTTCAAAACAAAGTAGGAGAAAACAC-TTT 992
|||| || ||| ||| | || ||||||||||| |||| ||||| || |||||||| ||
Sbjct 955 GTTTAGACACCAGAA-ACGCCTGGGATTTGTTGAAAAAGAAAGTGGGGGAAAACACATTA 1013
Query 993 GAAAAGCCATCCGGATATTCCTGAACTTGCAAAAC-AAGTCGCTGAAAAATGTCGTGGTC 1051
| |||||| || || ||||| | ||||| | | |||| | ||||||||||||||||
Sbjct 1014 G-GAAGCCACCCAGACATTCCCCAGCTTGC-ACGCAAAGTTTCGGAAAAATGTCGTGGTC 1071
Query 1052 TACCATTAGCACTTAATG-TCATTGGAGAAACTATGGCATGCAAAAGCACAGTTCAAGAA 1110
||||| ||||||| |||| || |||| || || ||| ||||||| || ||| | ||||||
Sbjct 1072 TACCACTAGCACTGAATGTTC-TTGGTGAGACCATGTCATGCAAGAGGACAATACAAGAA 1130
Query 1111 TGGCGTCACGCGATTGATGTTTTGACTTCATCAGCCATAGAGTTTTCAGGCATGGAAGAC 1170
||| |||| || ||||| |||||||||||||| || | ||| |||||||| ||||||||
Sbjct 1131 TGGTGTCATGCAATTGAGGTTTTGACTTCATCTGCTACAGATTTTTCAGGAATGGAAGAT 1190
Query 1171 GAAATTCTT-CAGATATTGAAGTATAGCTATGATA-ATTTACAAAGGGAGCATATCAAA- 1227
|| ||||| || || || || ||||||||||||| || | | ||||| || ||||
Sbjct 1191 GAGGTTCTTCCA-ATTTTAAAATATAGCTATGATAGCTTGA-ATGGGGAGGAT-GCAAAG 1247
Query 1228 TCATGTTTCCTATATTGCTCTTTATTTCCTGAAGATTATGAGATTAAG-AAAGAGGA-G- 1284
|| |||||||||||||||||| ||||||||||||||| | | | | || ||||| || |
Sbjct 1248 TCGTGTTTCCTATATTGCTCTCTATTTCCTGAAGATT-TTAAAATCAGAAAAGA-GATGT 1305
Query 1285 TTAGTAGACTATTGGATATGTGAAGGATTCATAGATGCAAAAG-ATGGTAAAGAGAGAGC 1343
||| | || || ||||| ||||| ||||||||||| | ||||| | |||| ||| | |||
Sbjct 1306 TTA-TTGAATACTGGATTTGTGAGGGATTCATAGAAG-AAAAGCAAGGTAGAGAAAAAGC 1363
Query 1344 GA-TAAACGAAGGCTATGAGATCA-TCGGTACTCTTGTCCGTACATGTTTTATTGATGGA 1401
| | ||| |||| ||||| || | ||||||||||||||||| ||| ||||||| ||||
Sbjct 1364 -ATTCAACCAAGGTTATGATAT-ACTCGGTACTCTTGTCCGTTCAT-CTTTATTGTTGGA 1420
Query 1402 GGAAGAATGGAAGAAAACGGAAGTGAAAATGCATGACGTGGTTCGTGAGATGGCTCTATG 1461
| | || | || | |||| |||||||| |||||||||||||||||||| ||
Sbjct 1421 -G--G-AT---A-AAGA-TTTTGTGAGTATGCATGATGTGGTTCGTGAGATGGCTCTGTG 1471
Query 1462 GATATCATCTGATCTTGGAAAGCATAAAGATCAATGCATTGTGCGAGCCGGTGTTGGGTT 1521
|||||||||||||||||||||||||||||| | ||| ||||||| |||||||||||| ||
Sbjct 1472 GATATCATCTGATCTTGGAAAGCATAAAGAGCGATGTATTGTGCAAGCCGGTGTTGGATT 1531
Query 1522 ACATGCAGTACCGGAAGTGAAGAACTGGAGAGCTGTGAGAAGAATGTCGTTGATGAAAAA 1581
| ||| | |||| ||||| ||||| ||||||||||||| ||| |||||| | ||||| ||
Sbjct 1532 AGATGAACTACCTGAAGTCAAGAATTGGAGAGCTGTGAAAAGGATGTCGCTAATGAATAA 1591
Query 1582 TGAGCTTGAAAAGATTT-TGGGT-TGCCCTACATGTCCTC-AACTTACAACTCTCCTCCT 1638
| | ||||||| || | ||| | | ||| | ||| | | |||||| |||||| ||||
Sbjct 1592 TAATTTTGAAAACATATATGGCTGT-CCCGA-ATG-CGTTGAACTTATAACTCTGTTCCT 1648
Query 1639 CCaaaaaaaCCACAAATTGGTAAAT-ATTTCCG-GAGAATTCTTTCGAT-TCATGCCTAA 1695
|| || ||| |||| |||||| | || || | ||||||||||| | | |||||||
Sbjct 1649 TCAGAATAACTACAAGTTGGTAG-TCATCTCAATG-GAATTCTTTCGGTGT-ATGCCTAG 1705
Query 1696 CCTTG-TCGTATTGGATTTATCATGGAA-T-AGTAGTCTCACTGGATTACCA-AAGAAAA 1751
|| | || |||||| ||||| | || | | ||||| | || | | ||| ||||||
Sbjct 1706 TCTAACT-GTTTTGGATCTATCA-GAAAATCAC-AGTCTTAGTGAACTGCCAGAAGAAA- 1761
Query 1752 TATCAGAGTTAGTCTCCTTGC-GATATCTTGACTTGTC-GTATACAAACATCGAAAGGTT 1809
|||||||||| || ||||||| | |||||||| ||||| | ||| | || || | |
Sbjct 1762 TATCAGAGTTGGTGTCCTTGCAG-TATCTTGATTTGTCCGGG-ACATATATAGAGCGACT 1819
Query 1810 GCCTGTTGGTTTACAAGAGTTGAAACAACTAA-TACATCTGAATTTGGAGTCCATGAAGA 1868
||| |||||||||| |||||| | || | | |||||||||| |||| | || ||
Sbjct 1820 ACCTCATGGTTTACAAAAGTTGAGA-AAGTTAGTACATCTGAAACTGGAAAGGACGAGGA 1878
Query 1869 GT-TTGGAGAGTATG-CTGGGGTATC-TAAGTTGTTGAGTTTGAAGA-CACTGAGACTAC 1924
| ||| |||| || | ||| |||| || |||| ||||||| || || | ||||||
Sbjct 1879 GACTTG-AGAGCATTTCAGGGATATCATAT-TTGTCAAGTTTGA-GAACATTAAGACTA- 1934
Query 1925 AAA-AGTCCAAAAAGG-CTCTAGATGT-GAAC-TCAGCGAAGGAGCTACAACTCTTAGAA 1980
| | | || ||||| | | ||||| | || | | | ||| || ||||| |||||||||
Sbjct 1935 AGAGATTC-AAAAACGACACTAGA-GACGAGCCTAAT-GAAAGAACTACAGCTCTTAGAA 1991
Query 1981 CATATAGAAGTTC-TAACCATAGATATCTTTTCAAGTTTGGTTTTGGAACATTTGT-TAT 2038
||| ||||| | | |||||| | |||||| |||||||||||| |||| || || |||
Sbjct 1992 CATTTAGAACT-CATAACCACAAATATCTCCTCAAGTTTGGTTGGGGAA--TTGGTATAT 2048
Query 2039 GCTCTCAGAGATTGGCGAAATCTATTCAA 2067
|| ||||| | || || || |||||||
Sbjct 2049 TATCCCAGAG-TAGG-GAGATGTATTCAA 2075
> Ahg334514 jgi|Araly1|334514|fgenesh1_pg.C_scaffold_1001079
Length=5556
Score = 942 bits (510), Expect = 0.0
Identities = 1237/1577 (78%), Gaps = 93/1577 (6%)
Strand=Plus/Plus
Query 669 GATTC-AAGAAGACATTGCA-AAAAGACTAGGTCTTACGGGCGA-GGAGTGGGACaaaaa 725
||||| ||| |||||| ||| ||||| | || ||| ||| || |||||||| | | ||
Sbjct 2646 GATTCAAAG-AGACATAGCAGAAAAG-GTTGGCCTT-GGGGGGATGGAGTGGGGCGAGAA 2702
Query 726 aaaCGAAAACAAGAGAGCCGTTGACATACACAATGTCCTTAGGAGAC-ATAAATTTGTGT 784
|||||| ||| ||| |||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct 2703 AAACGATAACCAGATAGCCGTTGACATCCACAATGTCCTTAGGAGACGA-AAATTTGTTT 2761
Query 785 TATTGTTGGATGATATATGGGAGAAAGTGAACTTAGAATTGGTTGGAGTACCGTATCCAA 844
| ||||||||||||||||||||||||||||| ||| || ||||||||| ||||||||||
Sbjct 2762 TGTTGTTGGATGATATATGGGAGAAAGTGAATTTAAAAGCGGTTGGAGTCCCGTATCCAA 2821
Query 845 GTAGAGAAAATGGAAGCATA-GTAGCATTTACCACCCGTTCTCGAGATGTTTGTGGGCGT 903
| | ||| || ||| ||| | |||||||| || || |||||||||||||| ||||||||
Sbjct 2822 GCAAAGATAACGGATGCA-AGGTAGCATTCACTACTCGTTCTCGAGATGTGTGTGGGCGC 2880
Query 904 ATGGGAGTCGATGACCCGATGCAAGTTAGTTGTTTGGAACCTGAAG-ATGCTTGGGATTT 962
||||| || ||||| |||||| ||||||| ||| | |||| |||| || | ||||||||
Sbjct 2881 ATGGGGGTTGATGATCCGATGGAAGTTAGCTGTCTACAACCCGAAGAAT-CATGGGATTT 2939
Query 963 GTTTCAAAACAAAG-TAGGAGAAAACACTTTGAAAAGCCATCCGGATATTCCTGAACTTG 1021
||| |||| | || | ||| |||| || || ||| || || || ||||| | |||||
Sbjct 2940 GTTCCAAATGACAGTTGGGA-AAAATACACTGGGAAGTCACCCAGACATTCCCGGACTTG 2998
Query 1022 C-AAAACAAGTCGCTGA-AAAATGTCGTGGTCTACCATTAGCACTTAATGTCATTGGAGA 1079
| | || |||||||| | ||||||||||| |||||||||||||| ||||| || || ||
Sbjct 2999 CTAGAA-AAGTCGCT-AGGAAATGTCGTGGCCTACCATTAGCACTCAATGTTATCGGTGA 3056
Query 1080 AACTATGGCATGCAAAAGCACAGTTCAAGAATGG-CGTCACGCGATTGATGTTTTGACTT 1138
| |||||||||||||||| ||||| || |||||| | ||| || ||||| |||||||| |
Sbjct 3057 AGCTATGGCATGCAAAAGAACAGTACATGAATGGTC-TCATGCCATTGACGTTTTGACAT 3115
Query 1139 CATCAGCCATAGAGTTTTCAGGCATGGAAGACGAAATTCTTCA-GATATTGAAGTATAGC 1197
|||| |||| ||| |||||||| |||||||| |||||||| || | | ||||||||||||
Sbjct 3116 CATCTGCCACAGATTTTTCAGGTATGGAAGATGAAATTCTCCATG-TTTTGAAGTATAGC 3174
Query 1198 TATGATAATTTACAA-AGGGAGCAT-ATCAAATCATGTTTCCTATATTGCTCTTTATTTC 1255
|||||||||||| || |||||| | || ||||| || ||||| ||||||||| | ||||
Sbjct 3175 TATGATAATTTA-AATGGGGAGC-TGATGAAATCCTGCTTCCTGTATTGCTCTCTGTTTC 3232
Query 1256 CTGAAGATTATGAGATTAAGAAAGAGGAGTTAGTAGACTATTGGATATGTGAAGGATTCA 1315
||||||||||| ||| | ||||||| ||| |||||||| ||||||||||| ||||| |
Sbjct 3233 CTGAAGATTATCTTATTGATAAAGAGGGGTTGGTAGACTACTGGATATGTGAGGGATTTA 3292
Query 1316 TAGATGCAAAAGATGGTAAAGAGA-GAGCGA-TAAACGAAGGCTATGAGATCATCGGTAC 1373
|| ||| |||||| || | ||||| || | | ||||| |||| |||||||| || |||||
Sbjct 3293 TAAATGAAAAAGAAGGCAGAGAGAGGA-C-ACTAAACCAAGGTTATGAGATAATTGGTAC 3350
Query 1374 TCTTGTCCGTACATGTTTTATTGATGGAGGAAGAATGGAAGAAAACGGAA-GTGAAAATG 1432
||||||||| |||| ||| ||||||||||||||| |||| ||| | || || ||||||
Sbjct 3351 CCTTGTCCGTGCATG-TTTGTTGATGGAGGAAGAAAGGAACAAATC-AAATGTAAAAATG 3408
Query 1433 CATGACGTGGTTCGTGAGATGGCTCTATGGATATCATCTGATCTTGGAAAGCATAAAG-A 1491
||||| |||||||||||||||||||||||||||||||| |||||||| ||||| |||| |
Sbjct 3409 CATGATGTGGTTCGTGAGATGGCTCTATGGATATCATCCGATCTTGGGAAGCA-AAAGGA 3467
Query 1492 TCAATGCATTGTGCGAGCCGGTGTTGGGTTACATGCAGTACCGGAAGTGAAGAACTGGAG 1551
|||| ||||||||||| |||||||||||| || |||||| |||| ||| | ||||
Sbjct 3468 GAAATGTATTGTGCGAGCTGGTGTTGGGTTATGTGAAGTACCACAAGTCAAGGATTGGAA 3527
Query 1552 -AGCTGTGAGAA-GAATGTCGTTGATGAAAAATGAGCTTGAAAAGAT-TTTGGGTTGCC- 1607
| |||| |||| || |||| |||||||| |||||| ||||| |||| |||| | |
Sbjct 3528 CA-CTGTAAGAAAGA-TGTCTTTGATGAATAATGAGATTGAAGAGATATTTGACA-GTCA 3584
Query 1608 CTACATGTCCT-CAACTTACAACTCTCCTCCTCCaaaaaaaCCACAAATTGGTAAATATT 1666
| | ||| || || ||||||||||| | |||||||| ||| ||| | |||||| ||
Sbjct 3585 CGAG-TGTGCTGCA-CTTACAACTCTATTTCTCCAAAAGAACGACA--T-GGTAAAGATC 3639
Query 1667 TCCGGA-GAATTCTTTCGAT-TCATGCCTAACCTTGTCGTATTGGATTTATCATG-GAAT 1723
|| || ||||||||||||| | |||||| | || || || || ||| ||||| | |||
Sbjct 3640 TC-GGCTGAATTCTTTCGATGT-ATGCCTCATCTGGTGGTTTTAGATCTATCA-GAGAAC 3696
Query 1724 -AGTAGTCTC-ACTGGATTACCA-AAGAAAATATCAGAGTTAGTCTCCTTGCGATATCTT 1780
| ||||| | || ||||||| |||||| |||||||||| ||||| ||| ||||| ||
Sbjct 3697 CAC-AGTCTTGA-TGAATTACCAGAAGAAA-TATCAGAGTTGGTCTCTTTGAGATAT-TT 3752
Query 1781 GA-CTTGTCGTATACA---A-ACATCGAAAGGTTGCCTGTTGGTTTACA-AGAGTTGAAA 1834
| |||||| ||||| | ||||| || | || || |||||| | | ||||||
Sbjct 3753 CAACTTGTCATATACTTGTATACATC-AAC--TACCC-GTAGGTTTATGGACA-TTGAAA 3807
Query 1835 CAA-CTAATACATCTGAATTTGGAGTC-CATGAAG-AGT-TTGGAGAGTATGCTGGGG-T 1889
|| ||||||||||||||| | || | ||||| | ||| |||| |||||| | ||| |
Sbjct 3808 -AAGCTAATACATCTGAATCTCGAA-CACATGA-GCAGTCTTGG-GAGTATATTAGGGAT 3863
Query 1890 ATCTAAGTTGTTGAGTTTGAAGACACTGAGACTACAAAAGTCCAAAAAGGCT-CTAGATG 1948
||| || |||| || ||||| |||| || |||||| | | |||||| | | ||||||
Sbjct 3864 ATCAAATTTGTGGAATTTGAGGACATTGGGACTACGAGATTCCAAACTGT-TGCTAGATA 3922
Query 1949 TGAACTCAGCGAAGGAGCTACAACTCTTAGAACATATAGAAGTTCTAACCATAGATATCT 2008
||| | | ||||||||| || |||||||||||| |||||||| | ||| ||||||| |
Sbjct 3923 TGAGTTTGGTGAAGGAGCTGCAGCTCTTAGAACATCTAGAAGTTGTGACCCTAGATATAT 3982
Query 2009 TTTCAAGTTTGGTTTTGGAAC-ATTTGTTATGCTCTCAGAGATTGGCGAAATCTATTCAA 2067
|||||||||||| || | ||| |||||||||||| || |||| | ||| ||| ||
Sbjct 3983 CATCAAGTTTGGTTGCAGAGCCATT-GTTATGCTCTCACAGGTTGGTGGAATGTATAAAA 4041
Query 2068 TATGTAGAGCTTATAG-AGGTTGAGGAAGAATCTTTCAAAATATTAACTTTTCCAAGCAT 2126
| ||||| ||| || | || |||||||||| | | | |||| ||| | |||| |||
Sbjct 4042 GAGGTAGATATTA-AGTATCTTAAGGAAGAATCAGTGAGAGTATTGACTCTGCCAACCAT 4100
Query 2127 GTGTAATATCCGTCGAATTGGCATATGGAAGT-GTGGAATGAAGGAGATAAA-AGTCGAG 2184
| ||||| ||||| | | || ||| || | ||||||||| ||||||||| | | |||
Sbjct 4101 GGGTAATCTCCGTAGGCTCGGGATAAA-AATTTGTGGAATGAGGGAGATAAAGA-TAGAG 4158
Query 2185 A-TGAGAACATCATCAT 2200
| | | ||| |||||||
Sbjct 4159 AGT-ACAACTTCATCAT 4174
Score = 848 bits (459), Expect = 0.0
Identities = 1256/1628 (77%), Gaps = 106/1628 (7%)
Strand=Plus/Plus
Query 487 ATGCTTGA-AAGGGTTTGGAACACTCTCATGAAAGATGGATTCAAGATCATGGGTTTATA 545
||||| || || ||| |||||| ||| ||| ||||| | || ||| ||||| | ||
Sbjct 226 ATGCTCGACAA-GGTATGGAACTGTCTAATGGAAGATAAAGTCGGGATTGTGGGTCTGTA 284
Query 546 TGGAATGGGTGGAGTGGGAAAAACCACGCTTCTTACGCAAATCAACAAGAAGTTTTCTGA 605
||| ||||||||||| ||||||||||| ||||| ||||| |||||||| ||||||||| |
Sbjct 285 TGGTATGGGTGGAGTAGGAAAAACCACCCTTCTCACGCAGATCAACAATAAGTTTTCT-A 343
Query 606 AAC-AGATGGTGGATTTGATATTGTGATGTGGGTTGTTGTGTCTAAAACCT-C-AGAGAT 662
||| || ||||||||||||| | ||||| |||||||| |||||||||| | | | || |
Sbjct 344 AACTAGGTGGTGGATTTGATGTCGTGATATGGGTTGTGGTGTCTAAAA-ATGCAACAG-T 401
Query 663 -CTATAGGATTC-AAGAAGACAT-TGCAAAAAGACTAGGTCTT-ACGGGCGAGGAGTGGG 718
| ||| ||||| |||||| ||| | |||| |||||| ||| ||| || ||||||
Sbjct 402 AC-ATAAGATTCAAAGAAG-CATCGGGGAAAA-ACTAGGCCTTGTTGGG-AAGAAGTGGG 457
Query 719 ACaaaaaaaaCGAAAACAAGAGAGCCGTTGACATACACAATGTCCTTAGGA-GACATAAA 777
|| | |||||| ||||| |||||||| ||||||| ||||| || ||||||| || | ||
Sbjct 458 ACGAGAAAAACAAAAACCAGAGAGCCCTTGACATCCACAACGTTCTTAGGAGGA-AGAAG 516
Query 778 TTTGTGTTATTGTTGGATGATATATGGGAGAAAGTGAACTTAGAAT-TGGTTGGAGTACC 836
||||| || |||||||||||||||||||| |||||||||||| ||| || ||||||| ||
Sbjct 517 TTTGTCTTGTTGTTGGATGATATATGGGAAAAAGTGAACTTA-AATGTGATTGGAGTCCC 575
Query 837 GTATCCAAGTAGAGAAAATGGAAGCATAGTAGCATTTACCACCCGTTCTCGA-GATGTTT 895
|||||| ||| ||||||| ||| ||| ||||||||| ||||| |||||| | || ||||
Sbjct 576 GTATCCGAGTGGAGAAAACGGATGCAAAGTAGCATTCACCACTCGTTCT-AAGGAAGTTT 634
Query 896 GTGGGCGTATGGGAGTCGATGACCCGATGCAAGTTAGTTGTTTGGA-ACCTGAAGATGCT 954
|||| || ||||| || |||||||||||| |||| |||||||| || ||| ||| | ||
Sbjct 635 GTGGACGCATGGGGGTAGATGACCCGATGGAAGTCAGTTGTTTAGACACCAGAA-ACGCC 693
Query 955 TGGGATTTGTTTCAAAACAAAGTAGGAGAAAACAC-TTTGAAAAGCCATCCGGATATTCC 1013
||||||||||| |||| ||||| || |||||||| || | |||||| || || |||||
Sbjct 694 TGGGATTTGTTGAAAAAGAAAGTGGGGGAAAACACATTAG-GAAGCCACCCAGACATTCC 752
Query 1014 TGAACTTGCAAAAC-AAGTCGCTGAAAAATGTCGTGGTCTACCATTAGCACTTAATG-TC 1071
| ||||| | | |||| | ||||||||||||||||||||| ||||||| |||| ||
Sbjct 753 CCAGCTTGC-ACGCAAAGTTTCGGAAAAATGTCGTGGTCTACCACTAGCACTGAATGTTC 811
Query 1072 ATTGGAGAAACTATGGCATGCAAAAGCACAGTTCAAGAATGGCGTCACGCGATTGATGTT 1131
|||| || || ||| ||||||| || ||| | ||||||||| |||| || ||||| |||
Sbjct 812 -TTGGTGAGACCATGTCATGCAAGAGGACAATACAAGAATGGTGTCATGCAATTGAGGTT 870
Query 1132 TTGACTTCATCAGCCATAGAGTTTTCAGGCATGGAAGACGAAATTCTT-CAGATATTGAA 1190
||||||||||| || | ||| |||||||| |||||||| || ||||| || || || ||
Sbjct 871 TTGACTTCATCTGCTACAGATTTTTCAGGAATGGAAGATGAGGTTCTTCCA-ATTTTAAA 929
Query 1191 GTATAGCTATGATA-ATTTACAAAGGGAGCATATCAAA-TCATGTTTCCTATATTGCTCT 1248
||||||||||||| || | | ||||| || |||| || ||||||||||||||||||
Sbjct 930 ATATAGCTATGATAGCTTGA-ATGGGGAGGAT-GCAAAGTCGTGTTTCCTATATTGCTCT 987
Query 1249 TTATTTCCTGAAGATTATGAGATTAAG-AAAGAGGA-G-TTAGTAGACTATTGGATATGT 1305
||||||||||||||| | | | | || ||||| || | ||| | || || ||||| |||
Sbjct 988 CTATTTCCTGAAGATT-TTAAAATCAGAAAAGA-GATGTTTA-TTGAATACTGGATTTGT 1044
Query 1306 GAAGGATTCATAGATGCAAAAG-ATGGTAAAGAGAGAGCGA-TAAACGAAGGCTATGAGA 1363
|| ||||||||||| | ||||| | |||| ||| | ||| | | ||| |||| ||||| |
Sbjct 1045 GAGGGATTCATAGAAG-AAAAGCAAGGTAGAGAAAAAGC-ATTCAACCAAGGTTATGATA 1102
Query 1364 TCA-TCGGTACTCTTGTCCGTACATGTTTTATTGATGGAGGAAGAATGGAAGAAAACGGA 1422
| | ||||||||||||||||| ||| ||||||| |||| | | || | || |
Sbjct 1103 T-ACTCGGTACTCTTGTCCGTTCAT-CTTTATTGTTGGA-G--G-AT---A-AAGA-TTT 1151
Query 1423 AGTGAAAATGCATGACGTGGTTCGTGAGATGGCTCTATGGATATCATCTGATCTTGGAAA 1482
|||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1152 TGTGAGTATGCATGATGTGGTTCGTGAGATGGCTCTGTGGATATCATCTGATCTTGGAAA 1211
Query 1483 GCATAAAGATCAATGCATTGTGCGAGCCGGTGTTGGGTTACATGCAGTACCGGAAGTGAA 1542
||||||||| | ||| ||||||| |||||||||||| ||| ||| | |||| ||||| ||
Sbjct 1212 GCATAAAGAGCGATGTATTGTGCAAGCCGGTGTTGGATTAGATGAACTACCTGAAGTCAA 1271
Query 1543 GAACTGGAGAGCTGTGAGAAGAATGTCGTTGATGAAAAATGAGCTTGAAAAGATTT-TGG 1601
||| ||||||||||||| ||| |||||| | ||||| ||| | ||||||| || | |||
Sbjct 1272 GAATTGGAGAGCTGTGAAAAGGATGTCGCTAATGAATAATAATTTTGAAAACATATATGG 1331
Query 1602 GT-TGCCCTACATGTCCTC-AACTTACAACTCTCCTCCTCCaaaaaaaCCACAAATTGGT 1659
| | ||| | ||| | | |||||| |||||| |||| || || ||| |||| |||||
Sbjct 1332 CTGT-CCCGA-ATG-CGTTGAACTTATAACTCTGTTCCTTCAGAATAACTACAAGTTGGT 1388
Query 1660 AAAT-ATTTCCG-GAGAATTCTTTCGAT-TCATGCCTAACCTTG-TCGTATTGGATTTAT 1715
| | || || | ||||||||||| | | ||||||| || | || |||||| |||
Sbjct 1389 AG-TCATCTCAATG-GAATTCTTTCGGTGT-ATGCCTAGTCTAACT-GTTTTGGATCTAT 1444
Query 1716 CATGGAA-T-AGTAGTCTCACTGGATTACCA-AAGAAAATATCAGAGTTAGTCTCCTTGC 1772
|| | || | | ||||| | || | | ||| |||||| |||||||||| || |||||||
Sbjct 1445 CA-GAAAATCAC-AGTCTTAGTGAACTGCCAGAAGAAA-TATCAGAGTTGGTGTCCTTGC 1501
Query 1773 -GATATCTTGACTTGTC-GTATACAAACATCGAAAGGTTGCCTGTTGGTTTACAAGAGTT 1830
| |||||||| ||||| | ||| | || || | | ||| |||||||||| ||||
Sbjct 1502 AG-TATCTTGATTTGTCCGGG-ACATATATAGAGCGACTACCTCATGGTTTACAAAAGTT 1559
Query 1831 GAAACAACTAA-TACATCTGAATTTGGAGTCCATGAAGAGT-TTGGAGAGTATG-CTGGG 1887
|| | || | | |||||||||| |||| | || ||| ||| |||| || | |||
Sbjct 1560 GAGA-AAGTTAGTACATCTGAAACTGGAAAGGACGAGGAGACTTG-AGAGCATTTCAGGG 1617
Query 1888 GTATC-TAAGTTGTTGAGTTTGAAGA-CACTGAGACTACAAA-AGTCCAAAAAGG-CTCT 1943
|||| || |||| ||||||| || || | |||||| | | | || ||||| | | ||
Sbjct 1618 ATATCATAT-TTGTCAAGTTTGA-GAACATTAAGACTA-AGAGATTC-AAAAACGACACT 1673
Query 1944 AGATGT-GAAC-TCAGCGAAGGAGCTACAACTCTTAGAACATATAGAAGTTC-TAACCAT 2000
||| | || | | | ||| || ||||| |||||||||||| ||||| | | ||||||
Sbjct 1674 AGA-GACGAGCCTAAT-GAAAGAACTACAGCTCTTAGAACATTTAGAACT-CATAACCAC 1730
Query 2001 AGATATCTTTTCAAGTTTGGTTTTGGAACATTTGT-TATGCTCTCAGAGATTGGCGAAAT 2059
| |||||| |||||||||||| |||| || || ||| || ||||| | || || ||
Sbjct 1731 AAATATCTCCTCAAGTTTGGTTGGGGAA--TTGGTATATTATCCCAGAG-TAGG-GAGAT 1786
Query 2060 CTATTCAA 2067
|||||||
Sbjct 1787 GTATTCAA 1794
> Ahg312255 jgi|Araly1|312255|fgenesh1_pm.C_scaffold_1001035
Length=5142
Score = 695 bits (376), Expect = 0.0
Identities = 835/1051 (79%), Gaps = 54/1051 (5%)
Strand=Plus/Plus
Query 1 ATGGGAGGTTGTATCTCGGTCTCGGTGTCATGTGATC-AGTTTGTGAATCAGTTCTCTCA 59
|||||||||||| | | |||||| |||||||||||| || |||||||||| |||||||
Sbjct 2509 ATGGGAGGTTGTTTAACAGTCTCGTTGTCATGTGATCAAG-TTGTGAATCAAATCTCTCA 2567
Query 60 ATGG-TTATGCGTTAGA-AAAGGTTA-CATT-CATAGCCTTCCCGAGAATCTAGCAGCTC 115
| || |||||| | | | |||||| || || || ||| |||||||||||| |||
Sbjct 2568 A-GGTTTATGCATCA-ATGCAGGTTATGTTTGCA-AG-CTTTCCGAGAATCTAGTGGCTA 2623
Query 116 TACAA-AAAGCCATTGAAGTTCTCAAGACAAAGC-ACGATGATGTGAAAAGAAGGGTCGA 173
| || |||| ||| ||||| |||||| |||| | ||||||||| |||||||||| ||
Sbjct 2624 T-GAAGAAAGACATGGAAGTGCTCAAGTTGAAGCGA-GATGATGTGCAAAGAAGGGTAGA 2681
Query 174 TAAAGAAGAATTTC-TAGGGCGTCGTCATAGGCTTTCTCAAGTTC-AGGTATGGCTTACA 231
|| ||||| | ||| | |||||||||| |||||||||||||| | ||| |||||| ||
Sbjct 2682 TAGAGAAG-AGTTCACAAGGCGTCGTCAAAGGCTTTCTCAAGTCCAAGG-ATGGCTAACG 2739
Query 232 AATGTCGT-GATTATCGA-GAAAAGGTTCAATGATTTGTTTAGT-AATAAAGAGGTTGAG 288
|||||| | || |||| ||||| |||||||| || ||| | | ||| || ||||||
Sbjct 2740 AATGTC-TCGACCGTCGAGGAAAA-ATTCAATGAACTGCTTA-TCACTAATGACGTTGAG 2796
Query 289 ATAGAGAGGTTGTGT-TTTTGTGGGTTTTGCTCCAAAAGTTTTGGAAA-GAGCTATCATT 346
| | ||||||||| | || || |||||||| |||| | || ||| ||||||| ||
Sbjct 2797 CTTCAAAGGTTGTGTCTCTT-CGGATTTTGCTCTAAAA-ATGTGAAAATTAGCTATCTTT 2854
Query 347 ATGGGAAAATGGTTAG-CGTGATGTTGAAGGAAG-TTGAGAATCTCT-CTTCTCGTGGAG 403
||||||||| |||| | | |||||||||||| || |||||| ||| | ||||| ||||
Sbjct 2855 ATGGGAAAAGGGTT-GTCATGATGTTGAAGG-AGATTGAGAGTCT-TAGTTCTCAAGGAG 2911
Query 404 TA-TTTGATGTGGTGACTGAGGAAAATCTGGTAGCTCAAG-TTGAGGAGATGCCTATTCA 461
| |||||| |||||||| || |||| | ||||| | | |||| ||||||||||||||
Sbjct 2912 -ATTTTGATACGGTGACTGTGGCCAATCCGATAGCT-AGGATTGAAGAGATGCCTATTCA 2969
Query 462 ATCC-ACAGTTGTTGGTCAAGAGACAATGCTTGAAAGGGTTTGGAACAC-TCTCATGAAA 519
| || ||| | || ||||| || |||||||| |||||||| ||| || | ||||| | |
Sbjct 2970 A-CCTACAATCGTAGGTCAGGAAACAATGCTCGAAAGGGTATGG-ACCCGTCTCACGGGA 3027
Query 520 GATGGATTCAAGATCATGGGT-TTATATGGAATGGGTGGAGTGGGAAAAACCACGCTTCT 578
|| ||| |||||| ||||| || ||||| ||||||||||| || |||||||| |||||
Sbjct 3028 GACGGAGACAAGATTGTGGGTCTT-TATGGCATGGGTGGAGTAGGCAAAACCACCCTTCT 3086
Query 579 TACGCAAATCAACAAGAAGTTTTCTGAAACAGATG--GTGGATTTGATATTGTGATGTGG 636
|| | ||||||||| ||||||||||||| | ||| | || |||| ||||||| |||
Sbjct 3087 CACACGAATCAACAACAAGTTTTCTGAAA-A-ATGTAGCGGGTTTGGGGTTGTGATATGG 3144
Query 637 GTTGTTGTGTCTAAAACCT-CAGAGATCTATAGGATTCAAGAAGACATTGCAAAAAGACT 695
||||| |||||||||| | |||| ||| ||||||||||| |||||| | ||||||||
Sbjct 3145 GTTGTGGTGTCTAAAA-GTCCAGATATCCGTAGGATTCAAGGAGACATCGGGAAAAGACT 3203
Query 696 AGGTCTTACGGGCGAGGAGTGGGACaaaaaaaaCG-AAAACAAGAGAGCCGTTGACATAC 754
|| ||| |||||| |||||||| || |||| | ||||| |||||||| ||||||||
Sbjct 3204 AGACCTTGGGGGCGAAGAGTGGGATAATGAAAATGAAAAAC-AGAGAGCCCTTGACATAT 3262
Query 755 ACAATGTCCTTAGGAGACATAAATTTGTGTTATTGTTGGATGATATATGGGAGAAAGTGA 814
||||||||||| ||| ||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 3263 ACAATGTCCTTGGGAAACAAAAATTTGTGTTGTTGTTGGATGATATATGGGAGAAAGTGA 3322
Query 815 ACTTAGAATTGGTTGGAGTACCGTATCCAAGTAGAGAAAATGGAAGCATAGTAGCATTTA 874
| |||||| | | ||||| || |||||||| | | |||||||| ||| |||||| ||||
Sbjct 3323 ATTTAGAAGCGCTCGGAGTCCCTTATCCAAGCAAACAAAATGGATGCAAAGTAGCCTTTA 3382
Query 875 CCACCCGTTCTCGAGATGTTTGTGGGCGTATGGGAGTCGATGACCCGAT-GCAAGTTAGT 933
|||| |||||| |||||||||||||| ||||||| || ||||||||| | | |||| |||
Sbjct 3383 CCACTCGTTCTAGAGATGTTTGTGGGTGTATGGGGGTTGATGACCCGGTTG-AAGTCAGT 3441
Query 934 TGTTTGGAACCTGAAGATGCTTGGGATTTGTTTCAAAACAAAGTAGGAGAAAACACTTTG 993
||| | ||||| || || |||||| | |||| |||| ||||| ||||||||||| |||
Sbjct 3442 TGTCTAGAACCCGACGAAGCTTGGAAACTGTTCCAAATGAAAGTTGGAGAAAACACATTG 3501
Query 994 AAAAGCCATCCGGATATTCCTGAACTTGCAA 1024
||| ||||||| || ||||||||||||||||
Sbjct 3502 AAAGGCCATCCAGACATTCCTGAACTTGCAA 3532
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 99910712635
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5