BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G14650.1
Length=2179
Score E
Sequences producing significant alignments: (Bits) Value
Ahg493441 jgi|Araly1|493441|fgenesh2_kg.7__2874__AT4G14650.1 1430 0.0
> Ahg493441 jgi|Araly1|493441|fgenesh2_kg.7__2874__AT4G14650.1
Length=1908
Score = 1430 bits (774), Expect = 0.0
Identities = 936/1014 (92%), Gaps = 12/1014 (1%)
Strand=Plus/Plus
Query 996 TGAATGGAACTCAAACTGTTGTGAGCAAATTGAATTCGACAGTGTCTGGTAATGAAGA-A 1054
|||| |||||||||| ||||||||||||| |||||| ||||| ||||||||||||||| |
Sbjct 901 TGAAGGGAACTCAAAGTGTTGTGAGCAAACTGAATTGGACAGAGTCTGGTAATGAAGAGA 960
Query 1055 AGGCTCTGTGTGATTGATGAGATTGTCTTTGAATCTCCAAGATGTTTTGCAACTGTT-GA 1113
| |||||||| |||| ||||||||||||||||||||||||| | | ||| ||||||| ||
Sbjct 961 A-GCTCTGTGCGATTCATGAGATTGTCTTTGAATCTCCAAGCTCTCTTGGAACTGTTGGA 1019
Query 1114 TACTGATGAAAACATGGTGAATGAGTCTCGGGACGAAATTGTTCATTCAGAGGAAGTTGT 1173
||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct 1020 -ACTGAAGAAAACATGGTGAATGAGTCTTTGGACGAAATTTTTCATTCAGAGGAAGTTGT 1078
Query 1174 AAAGCTTGATCAAGAGACTGGAATTGAACAGAGAAGAGGAAGGGAAGAGTTTCCTGAAAT 1233
||||||||||||||||||||| || |||||||||| ||||||||||| | ||||||||||
Sbjct 1079 AAAGCTTGATCAAGAGACTGGTATGGAACAGAGAACAGGAAGGGAAGGGATTCCTGAAAT 1138
Query 1234 CGAGCCACAGGAGATTCTGAATCTGGACTATCGTATTGTTCATGATGAAGAAGTTACAGA 1293
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1139 CGAGCCACAGGAGATTCTGAATCTGGACTATCGCGTTGTTCATGATGAAGAAGTTACAGA 1198
Query 1294 CAAAGGAAAAGCCGATAAGGCGATCTCCAACTCTAAACCTTGTTCGCAAGAGTCAAATGC 1353
||||||||| || |||||| ||||| |||||||||||| ||| |||||||||| ||||
Sbjct 1199 TGAAGGAAAAGTCGGTAAGGCAATCTCTAACTCTAAACCTGGTTTGCAAGAGTCAGATGC 1258
Query 1354 AAATCAAGACACTGGTCTTGGAGTTTATAAAGAAGAGAAGGAGAAAAGAGAAGCGAGTCT 1413
| |||||| | ||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct 1259 CATTCAAGAGGCCGGTCTTGGAGTTTATAAAGCAGAGAAGGACAAAAGAGAAGCGAGTCT 1318
Query 1414 -AAGACGCATGTATCGATGTAGATCACTCCCAGTGAGCCAGAATAGTAGAGTTATTGGAG 1472
|| |||||||||||| || ||||| ||||||||||||||||||||||||||||||||||
Sbjct 1319 GAA-ACGCATGTATCGGTGCAGATCGCTCCCAGTGAGCCAGAATAGTAGAGTTATTGGAG 1377
Query 1473 ATTCGCTTGTTCAACATTTGGTTTCAGAGGTTGCGTTTCCTTCAAGAAACAAGATGGGTT 1532
||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1378 ATTCGCTGGTTCAACAGTTGGTTTCAGAGGTTGCGTTTACTTCAAGAAACAAGATGGGTC 1437
Query 1533 TAGAGAAAGCTAACACGTCTGCA-GCTCTGCTTGTTCCTTGCGTAGGAAGCAACAAAACG 1591
|| |||||||||||||||||| | ||||| ||||||||||||||||||||||||||| ||
Sbjct 1438 TAAAGAAAGCTAACACGTCTG-AGGCTCTACTTGTTCCTTGCGTAGGAAGCAACAAAGCG 1496
Query 1592 CAAGAGACTATTGAAGCGATAATTGAAAGCAGTAAAGAAGCTAGATTTGAGATGCCAGCT 1651
||||| |||||||||||||||| |||||||| |||||||||||| | ||||||| ||||
Sbjct 1497 CAAGAAACTATTGAAGCGATAACTGAAAGCAATAAAGAAGCTAGGCTCGAGATGCGAGCT 1556
Query 1652 CCTAGCTTTGATCATGGCCTAAGAATCGAAGAAAGACGCGATGAATCG-GTAGAGAATAC 1710
|||||||||| ||||| ||||||||||||||||||| | ||||||||| | ||||||||
Sbjct 1557 CCTAGCTTTGGTCATGACCTAAGAATCGAAGAAAGAAGTGATGAATCGACT-GAGAATAC 1615
Query 1711 TCCGGTACTCTGTGAGGACAAGACTGAGATATACGAGGCAACAATCGATGTGGAAGAGAA 1770
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1616 TCCGCTACTCTGTGAGGACAAGACTGAGATATACGAGGCAACAATCGATGTGGAAGAGAA 1675
Query 1771 AACTGTGATGCTGAAGAGAAGTGAGTCTGTGAAATCAAGAGGCAGCGAGATGTCTCTAGG 1830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1676 AACTGTGATGCTGAAGAGAAGTGAGTCTGTGAAATCAAGAGGCAGCGAGATGTCTCT-GG 1734
Query 1831 G-TCGTTGAAGAAACACAATGATAGCTTCAAAGAAACCAAGGGCTCAGAAGATAACTTGG 1889
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1735 GCTCGTTGAAGAAACACAATGATAGCTTCAAAGAAACCAAGGGCTCAGAAGATAACCTGG 1794
Query 1890 TGGACAAGAAAGCTTCACCTGATTCTATGAAAGGCATAGTCAGAAAACGGAGTAAATCTT 1949
|||||||||||||||| || |||||||||||||||||||||| |||||| ||||||||||
Sbjct 1795 TGGACAAGAAAGCTTCGCCGGATTCTATGAAAGGCATAGTCAAAAAACGAAGTAAATCTT 1854
Query 1950 CGCTCTTGGGAACATGCCTTTGTTGCACCACCGCAATGAATTGAACTAATTATT 2003
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1855 CGCTCTTGGGAACATGCCTTTGTTGCACCACCGCAATGAATTGAACTAATTATT 1908
Score = 1297 bits (702), Expect = 0.0
Identities = 905/1001 (90%), Gaps = 21/1001 (2%)
Strand=Plus/Plus
Query 1 CGTTCAGACAGAAACCTCTTATTGTTCTCTGTTTCGGGTTTTCAGATTTGTTCAAAAGAT 60
||||||||||||||||||| |||| ||| || | ||||| |||| ||| | ||||
Sbjct 1 CGTTCAGACAGAAACCTCTAATTG--CTC----TC-TG-TTTCA-ATTT-TTC-AGAGAT 49
Query 61 TTTGATCTGTTGAAAATTGAACAAAGGAGATGATATGGGAAACAACAACGCAACTGCCAT 120
|||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 50 TTTGATCTATTGAAAATTGAACAAAGGAGATGATATGGGAAACAACAACGCCACTGCCAT 109
Query 121 TTTATCAGATCAAGAAGAGAGCTCAAAGCTTA-AAAACAATGGAATACCTCCATTGGCTT 179
|||| |||||||||||||||| ||||||| || ||| ||||||| | |||||||||| |
Sbjct 110 TTTAACAGATCAAGAAGAGAGGTCAAAGC-TAGAAATCAATGGAGTGTCTCCATTGGCCT 168
Query 180 CTTCCGTAGATACCACGCAAGATCTGGTGTTTATTGCTTGTGAAAGTAAAGATGGAGATG 239
|||||||||||||||||||||| | ||||||| ||||| ||||| |||||||||||||||
Sbjct 169 CTTCCGTAGATACCACGCAAGAGCAGGTGTTTTTTGCTGGTGAAGGTAAAGATGGAGATG 228
Query 240 AAGAGATAGAGAGCTCAAAGCTAGAAACCAATGG-AATGTCTCCATTGGACT-CTGTTTC 297
|||||| ||||||||||||||||||||||||||| || | ||||||| | | | |||||
Sbjct 229 AAGAGAAAGAGAGCTCAAAGCTAGAAACCAATGGAAACAT-TCCATTGAATTAC-GTTTC 286
Query 298 TTTAGAGACCGCGCAAGATCAAGTGTTTCTTGAAGGTGAAGAAAAAGATGGAGATGAAGA 357
||||||||||| ||||||||||| |||||||| ||||||||||||||||||||| ||||
Sbjct 287 TTTAGAGACCGTGCAAGATCAAGGGTTTCTTGCGGGTGAAGAAAAAGATGGAGATCAAGA 346
Query 358 GAAAGAGAGCTCAAACCTAGAAACCAATGGAATGTCTCCATTGGAGTCTGTTCCCGTAGA 417
||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 347 GAAAGAGAGCTCAAAGTTAGAAACCAATGGAATGTCTCCATTGGAGACTGTTTCCGTAGA 406
Query 418 GATCACGCAAGAGCAAGTGTTTCTTGAGGGTGAAGAAAAAGATGGAGATCAAGAGAAGGA 477
|||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct 407 GATCACGCAAAAGCAGGTGTTTCTTGCGGGTGAAGAAAAAGATGGAGATCAAGAGAAGGA 466
Query 478 AAGTTTAAAGCTAGAAATCAATGGAATGTCTCCATTGGACTCAATATTAGTAGAGACCAG 537
||| | ||||||||||| ||||||||||||||| ||||||||||||| ||| |||||||
Sbjct 467 AAGCTCAAAGCTAGAAACCAATGGAATGTCTCCGTTGGACTCAATATCCGTAAAGACCAG 526
Query 538 GCAAGATCAGTTGTTTCTTGCGGGTGAAGAAAAAGAAGGAGATCTAGAGAAAGAGAGCTC 597
||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||
Sbjct 527 GCAAGATCAGTTGTTTCTTGCGGTTGAAGAAAAAGATGGAGATCAAGAGAAAGAGAGCTC 586
Query 598 GACGCTAGAAACTAATGGAATGTCTCCGTTTGACTCTATTCCCATAGAGACCACGGAAGA 657
| ||||||||| |||||||||||||| || ||||||||| || |||||||||| ||||
Sbjct 587 AAAGCTAGAAACCAATGGAATGTCTCCATTAGACTCTATTTCCGTAGAGACCACACAAGA 646
Query 658 TCAGTTCTTTCTTGCAGGTGAAGGAAACGATGGAGATGAAGAGAAAGAGAGTTTGTGTGA 717
|||||| ||||| |||||||||||||| || ||||||||||||||||||||||||| | |
Sbjct 647 TCAGTTGTTTCTCGCAGGTGAAGGAAAAGAAGGAGATGAAGAGAAAGAGAGTTTGTCTAA 706
Query 718 TGGTGTTGAAGAAACAGAACCACATAGCAAGG-ATTTAGTTGATGAACCGAAAGTAAAAC 776
|||||||||||||||||||| ||||||||||| |||| ||||||||| |||||||||||
Sbjct 707 TGGTGTTGAAGAAACAGAACAACATAGCAAGGAATTT-GTTGATGAATCGAAAGTAAAAA 765
Query 777 ATTTCGAAGAAGAGATGGACCATAGTGGCTTGGAGAGCTTGGTAATGGAAACATCTGAGA 836
| ||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct 766 AATTCAAAGAAGAGATGGACCAGAGTGGCTTGGAGAGCTTGGTAATGGAAACAGCTGAGA 825
Query 837 AGCTTCAAAAACAGACATCAGTTGCGAAAGGTGTTGAAAATTTGAGTGAAGCAAGAGAAG 896
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 826 AGCTTCAAAAACAGACATCAGTTGCGAAAGGTGTTGAAACTTTGAGTGAAGCAAGAGAAG 885
Query 897 TGGAAGTGTTGTCTATGAATGGAACTCAAACTGTTGTGAGCAAATTGAATTCGACAGTGT 956
|||||| |||||||||||| |||||||||| ||||||||||||| |||||| ||||| ||
Sbjct 886 TGGAAGAGTTGTCTATGAAGGGAACTCAAAGTGTTGTGAGCAAACTGAATTGGACAGAGT 945
Query 957 CTGGTAATGAAGA-AAGGCTCTGTGTGATTGATGAGATTGT 996
||||||||||||| ||| ||||||| |||| ||||||||||
Sbjct 946 CTGGTAATGAAGAGAAG-CTCTGTGCGATTCATGAGATTGT 985
Score = 442 bits (239), Expect = 5e-123
Identities = 396/470 (84%), Gaps = 17/470 (4%)
Strand=Plus/Plus
Query 135 AAGAGAGCTCAAAGCTTA-AAAACAATGGAATAC-CTCCATTGGCTT-C--TTCCGTAGA 189
||||||||||||||| || ||| |||||||| || ||||||| || | ||| ||||
Sbjct 235 AAGAGAGCTCAAAGC-TAGAAACCAATGGAA-ACATTCCATTGAATTACGTTTCTTTAGA 292
Query 190 TACCACGCAAGATC-TGGTGTTTATTGCTTGTGAAAG-TAAAGATGGAGATGAAGAGATA 247
||| |||||||| || |||| |||| ||| ||| |||||||||||| |||||| |
Sbjct 293 GACCGTGCAAGATCAAGG-GTTTCTTGCGGGTG-AAGAAAAAGATGGAGATCAAGAGAAA 350
Query 248 GAGAGCTCAAAGCTAGAAACCAATGGAATGTCTCCATTGGACTCTGTTTCTTTAGAGACC 307
|||||||||||| |||||||||||||||||||||||||||| ||||||| |||||| |
Sbjct 351 GAGAGCTCAAAGTTAGAAACCAATGGAATGTCTCCATTGGAGACTGTTTCCGTAGAGATC 410
Query 308 GCGCAAGATCAAGTGTTTCTTGAAGGTGAAGAAAAAGATGGAGATGAAGAGAAAGAGAGC 367
||||| | || |||||||||| ||||||||||||||||||||| ||||||| || |||
Sbjct 411 ACGCAAAAGCAGGTGTTTCTTGCGGGTGAAGAAAAAGATGGAGATCAAGAGAAGGAAAGC 470
Query 368 TCAAACCTAGAAACCAATGGAATGTCTCCATTGGAGTCTGT-TCCCGTAGAGATCACGCA 426
||||| ||||||||||||||||||||||| ||||| || | ||| ||| ||| || |||
Sbjct 471 TCAAAGCTAGAAACCAATGGAATGTCTCCGTTGGACTCAATATCC-GTAAAGACCAGGCA 529
Query 427 AGAGCAAGT-GTTTCTTGAGGGTGAAGAAAAAGATGGAGATCAAGAGAAGGAAAGTTTAA 485
||| || || |||||||| || ||||||||||||||||||||||||||| || || | ||
Sbjct 530 AGATCA-GTTGTTTCTTGCGGTTGAAGAAAAAGATGGAGATCAAGAGAAAGAGAGCTCAA 588
Query 486 AGCTAGAAATCAATGGAATGTCTCCATTGGACTCAATATTA-GTAGAGACCAGGCAAGAT 544
||||||||| |||||||||||||||||| ||||| || || |||||||||| ||||||
Sbjct 589 AGCTAGAAACCAATGGAATGTCTCCATTAGACTCTAT-TTCCGTAGAGACCACACAAGAT 647
Query 545 CAGTTGTTTCTTGCGGGTGAAGAAAAAGAAGGAGATCTAGAGAAAGAGAG 594
||||||||||| || ||||||| ||||||||||||| ||||||||||||
Sbjct 648 CAGTTGTTTCTCGCAGGTGAAGGAAAAGAAGGAGATGAAGAGAAAGAGAG 697
Score = 436 bits (236), Expect = 2e-121
Identities = 396/472 (84%), Gaps = 16/472 (3%)
Strand=Plus/Plus
Query 243 AGATAGAGAGCTCAAAGCTAGAAACCAATGGAATGTCTCCATTGGACTCTGTTTCTTTAG 302
||| |||||| ||||||||||||| ||||||| |||||||||||| | || ||| |||
Sbjct 122 AGA-AGAGAGGTCAAAGCTAGAAATCAATGGAGTGTCTCCATTGG-C-CT-CTTCCGTAG 177
Query 303 AGACCGCGCAAGATCAAGTGTTTCTTGAAGGTGAAGAAAAAGATGGAGATGAAGAGAAAG 362
| ||| ||||||| || |||||| ||| ||||||| ||||||||||||||||||||||
Sbjct 178 ATACCACGCAAGAGCAGGTGTTTTTTGCTGGTGAAGGTAAAGATGGAGATGAAGAGAAAG 237
Query 363 AGAGCTCAAACCTAGAAACCAATGGAATG-TCTCCATTGGAGT-CTGTTCCCGTAGAGAT 420
|||||||||| |||||||||||||||| | ||||||| | | | ||| | ||||||
Sbjct 238 AGAGCTCAAAGCTAGAAACCAATGGAAACAT-TCCATTGAATTAC-GTTTCTTTAGAGAC 295
Query 421 CACGCAAGAGCAAGTGTTTCTTGAGGGTGAAGAAAAAGATGGAGATCAAGAGAAGGAAAG 480
| |||||| |||| |||||||| |||||||||||||||||||||||||||||| || ||
Sbjct 296 CGTGCAAGATCAAGGGTTTCTTGCGGGTGAAGAAAAAGATGGAGATCAAGAGAAAGAGAG 355
Query 481 TTTAAAGCTAGAAATCAATGGAATGTCTCCATTGGACTCAATATTA-GTAGAGACCAGGC 539
| |||| |||||| ||||||||||||||||||||| | | || ||||||| || ||
Sbjct 356 CTCAAAGTTAGAAACCAATGGAATGTCTCCATTGGAGACTGT-TTCCGTAGAGATCACGC 414
Query 540 AAGATCAGTTGTTTCTTGCGGGTGAAGAAAAAGAAGGAGATCTAGAGAAAGAGAGCTCGA 599
|| | ||| ||||||||||||||||||||||||| ||||||| |||||| || ||||| |
Sbjct 415 AAAAGCAGGTGTTTCTTGCGGGTGAAGAAAAAGATGGAGATCAAGAGAAGGAAAGCTCAA 474
Query 600 CGCTAGAAACTAATGGAATGTCTCCGTTTGACTCTAT-TCCCATAGAGACCACGG-AAGA 657
||||||||| ||||||||||||||||| ||||| || ||| || |||||| || ||||
Sbjct 475 AGCTAGAAACCAATGGAATGTCTCCGTTGGACTCAATATCCG-TAAAGACCA-GGCAAGA 532
Query 658 TCAGTTCTTTCTTGCAGGT-GAAGGAAACGATGGAGATGAAGAGAAAGAGAG 708
|||||| |||||||| ||| |||| ||| ||||||||| |||||||||||||
Sbjct 533 TCAGTTGTTTCTTGC-GGTTGAAGAAAAAGATGGAGATCAAGAGAAAGAGAG 583
Score = 327 bits (177), Expect = 2e-88
Identities = 311/372 (84%), Gaps = 24/372 (6%)
Strand=Plus/Plus
Query 127 AGATC-A-AG-AAGAGAGCTCAAAGCTTA-AAAACAATGGAATACCTCCATT-G-G-CT- 178
||||| | || |||||||||||||| ||| ||| ||||||||| ||||||| | | ||
Sbjct 338 AGATCAAGAGAAAGAGAGCTCAAAG-TTAGAAACCAATGGAATGTCTCCATTGGAGACTG 396
Query 179 TCTTCCGTAGATACCACGCAAGATCTGGTGTTTATTGCTTGTGAAAG-TAAAGATGGAGA 237
| ||||||||| | ||||||| | | ||||||| |||| ||| ||| |||||||||||
Sbjct 397 T-TTCCGTAGAGATCACGCAAAAGCAGGTGTTTCTTGCGGGTG-AAGAAAAAGATGGAGA 454
Query 238 TGAAGAGATA-GAGAGCTCAAAGCTAGAAACCAATGGAATGTCTCCATTGGACTCTGTTT 296
| |||||| | || |||||||||||||||||||||||||||||||| |||||||| | |
Sbjct 455 TCAAGAGA-AGGAAAGCTCAAAGCTAGAAACCAATGGAATGTCTCCGTTGGACTCAATAT 513
Query 297 CTTTAGAGACC-GCGCAAGATCAAGT-GTTTCTTGAAGGT-GAAGAAAAAGATGGAGATG 353
| || ||||| | ||||||||| || |||||||| ||| ||||||||||||||||||
Sbjct 514 CCGTAAAGACCAG-GCAAGATCA-GTTGTTTCTTGC-GGTTGAAGAAAAAGATGGAGATC 570
Query 354 AAGAGAAAGAGAGCTCAAACCTAGAAACCAATGGAATGTCTCCATTGGAGTCTGTTCCCG 413
||||||||||||||||||| |||||||||||||||||||||||||| || ||| || |||
Sbjct 571 AAGAGAAAGAGAGCTCAAAGCTAGAAACCAATGGAATGTCTCCATTAGACTCTATTTCCG 630
Query 414 TAGAGATCACGCAAGAGCAAGT-GTTTCTTG-AGGGTGAAGAAAAAGATGGAGATCAAGA 471
|||||| ||| ||||| || || |||||| | ||| ||||| |||||| |||||| ||||
Sbjct 631 TAGAGACCACACAAGATCA-GTTGTTTCTCGCAGG-TGAAGGAAAAGAAGGAGATGAAGA 688
Query 472 GAAGGAAAGTTT 483
||| || |||||
Sbjct 689 GAAAGAGAGTTT 700
Score = 222 bits (120), Expect = 7e-57
Identities = 210/251 (84%), Gaps = 16/251 (6%)
Strand=Plus/Plus
Query 127 AGATC-A-AGAA-GAGAGCTCAAAGCTTA-AAAACAATGGAATACCTCCATTGG-CTTC- 180
||||| | |||| || |||||||||| || ||| ||||||||| |||| |||| | ||
Sbjct 452 AGATCAAGAGAAGGAAAGCTCAAAGC-TAGAAACCAATGGAATGTCTCCGTTGGAC-TCA 509
Query 181 -T-TCCGTAGATACCACGCAAGATCTGGTGTTTATTGCTTG-TGAAAG-TAAAGATGGAG 236
| |||||| | |||| |||||||| | ||||| |||| | || ||| ||||||||||
Sbjct 510 ATATCCGTAAAGACCAGGCAAGATCAGTTGTTTCTTGC-GGTTG-AAGAAAAAGATGGAG 567
Query 237 ATGAAGAGATAGAGAGCTCAAAGCTAGAAACCAATGGAATGTCTCCATTGGACTCTGTTT 296
|| |||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct 568 ATCAAGAGAAAGAGAGCTCAAAGCTAGAAACCAATGGAATGTCTCCATTAGACTCTATTT 627
Query 297 CTTTAGAGACCGCGCAAGATCAAGT-GTTTCTTGAAGGTGAAGAAAAAGATGGAGATGAA 355
| |||||||| | |||||||| || |||||| | |||||||| |||||| |||||||||
Sbjct 628 CCGTAGAGACCACACAAGATCA-GTTGTTTCTCGCAGGTGAAGGAAAAGAAGGAGATGAA 686
Query 356 GAGAAAGAGAG 366
|||||||||||
Sbjct 687 GAGAAAGAGAG 697
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82008297485
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5