BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G15040.1
Length=2064
Score E
Sequences producing significant alignments: (Bits) Value
Ahg493383 jgi|Araly1|493383|fgenesh2_kg.7__2816__AT4G15040.1 3042 0.0
Ahg890806 jgi|Araly1|890806|Al_scaffold_0007_2792 2427 0.0
> Ahg493383 jgi|Araly1|493383|fgenesh2_kg.7__2816__AT4G15040.1
Length=2052
Score = 3042 bits (1647), Expect = 0.0
Identities = 1936/2073 (93%), Gaps = 30/2073 (1%)
Strand=Plus/Plus
Query 1 ATGGGAGCTCTTCCATCAAAAATTTCTTACTCTCCTATGTCTCACCATCAGAATATCCTT 60
|||||||||||||| |||||| |||||||||||||||||| |||||||| |||||||||
Sbjct 1 ATGGGAGCTCTTCCTTCAAAAGCTTCTTACTCTCCTATGTCCCACCATCAAAATATCCTT 60
Query 61 CAAGAAGTCATCGAATCAAG---TTCCGTTGAAGATTATTTGGTCAGAAGCTATGGAAGA 117
|||||||| || |||||||| |||| | ||||||| |||||| |||||||||||||||
Sbjct 61 CAAGAAGTTATTGAATCAAGTAATTCCATAGAAGATTCTTTGGTTAGAAGCTATGGAAGA 120
Query 118 AGTTTCAATGGTTTTGCAGCCAAACTTACTGAATCTGAAAAAGATAAACTTATTGGCATG 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 AGTTTCAATGGTTTTGCAGCCAAACTTACTGAATCTGAAAAAGATAAACTTATTGGCATG 180
Query 178 GAAGGTGTGGTTTCGGTATTCCCAAGCACCGTTTATAAGCTTTTTACGACAAGGTCTTAT 237
|||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||||
Sbjct 181 GAAGGTGTGGTTTCCGTATTCCCAAGCACCGTTTATAAGCTTTTGACAACAAGATCTTAT 240
Query 238 GAGTTCATGGGACTTGGTGACAAGAGCAACAATGTCCCTGAGGTCGAGAGCAATGTAATA 297
|||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||
Sbjct 241 GAGTTCATGGGACTTGGTGACAAGAGTAACCATGTCCCTGAGGTCGAGAGCAATATAATA 300
Query 298 GTAGGTGTAATAGACGGCGGAATCTGGCCTGAATCCAAAAGTTTTTCAGATGAAGGCATT 357
|| |||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 301 GTTGGTGTAATCGACGGCGGAATCTGGCCTGAATCCAAGAGTTTTTCAGACCAAGGCATT 360
Query 358 GGCCCAATACCAAAGAAATGGAAAGGAACTTGCGCAGGAGGAACTAATTTCACCTGCAAT 417
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 361 GGCCCAATACCAAAGAAATGGAAAGGAACTTGCGCAGGAGGAACTAATTTCAGCTGCAAT 420
Query 418 AGAAAGGTGATTGGAGCCCGACACTATGTGCACGACTCCGCAAGAGACAGTGACGCTCAC 477
||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||
Sbjct 421 AGAAAGGTGATTGGAGCACGACACTATGTGCAGGACTCGGCAAGAGACAGTGACGCTCAT 480
Query 478 GGGTCACACACGGCTTCAACAGCAGCAGGAAACAAAGTAAAAGGAGTGAGTGTGAACGGT 537
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 481 GGATCACACACGGCTTCAACAGCCGCAGGAAACAAAGTAAAAGGAGTGAGTGTGAACGGT 540
Query 538 GTGGCAGAAGGAACTGCAAGAGGTGGTGTGCCTTTAGGTAGAATTGCTGTTTACAAAGTG 597
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 GTAGCAGAAGGAACTGCAAGAGGTGGTGTGCCTTTAGGTAGAATTGCTGTTTACAAAGTG 600
Query 598 TGCGAGCCATTGGGTTGCAATGGTGA-ACGAATTTTGGCTGCGTTCGACGATGCTATAGC 656
||||||||| |||||||| ||| || | || | ||||||||||| ||||||||||||||
Sbjct 601 TGCGAGCCAGCGGGTTGCAGTGGCGATA-GACTGTTGGCTGCGTTTGACGATGCTATAGC 659
Query 657 GGATGGGGTAGATGTTTTAACCATTTCTCTTGGAGGCGGTGTTACTAAAGTTGACATTGA 716
||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct 660 GGATGGGGTCGATGTTATAACCATTTCTCTTGGAGGCGGTGTTACTAAAGTTGACAATGA 719
Query 717 CCCTATCGCTATTGGATCATTTCACGCGATGACCAAAGGGATTGTTACCACGGTAGCGGT 776
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 CCCTATTGCTATAGGATCATTTCACGCGATGACCAAAGGGATTGTTACCACGGTAGCGGT 779
Query 777 TGGAAATGCCGGCACTGCACTCGCAAAAGCGGATAACCTTGCACCATGGCTCATATCCGT 836
|||||| |||||| ||||||| | ||||||||||||||||||||| ||| ||||||| ||
Sbjct 780 TGGAAACGCCGGCTCTGCACTTGGAAAAGCGGATAACCTTGCACCGTGGGTCATATCGGT 839
Query 837 GGCTGCTGGCTCTACTGACAGAAAATTTGTTACTAATGTGGTTAATGGAGATGACAAGAT 896
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 840 GGCTGCTGGCTCTACTGATAGAAAATTTGTTACTAATGTGGTTAATGGAGATGACAAGAT 899
Query 897 GTTACCTGGAAGATCGATCAATGACTTTGACTTAGAGGGAAAGAAGTATCCTTTGGCGTA 956
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 900 GATACCTGGAAGATCGATCAATGACTTTGACTTAAAGGGAAAGAAGTATCCTTTGGCGTA 959
Query 957 TGGAAAAACTGCTTCAAATAACTGTACAGAGGAGCTAGCAAGGGGTTGCGCTAGCGGTTG 1016
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 960 CGGAAAAACTGCTTCAAACAACTGTACAGAGGAGCTAGCAAGGGGTTGCGCTAGCGGTTG 1019
Query 1017 CCTGAACACGGTGGAAGGAAAGATTGTTGTGTGCGATGTTCCAAATAATGTTATGGAACA 1076
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1020 CCTGAACACAGTGGAAGGAAAGATTGTTGTGTGCGATGTTCCAAATAATGTAATGGAACA 1079
Query 1077 GAAAGCAGCGGGTGCGGTTGGAACTATCCTTCATGTAACTGATGTTGATACTCCCGGTCT 1136
|||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1080 GAAAGCAGGGGGTGCGGTTGGAACTATCCTTCATGTAACCGATGTTGATACTCCCGGTCT 1139
Query 1137 TGGTCCTATTGCCGTTGCAACCTTAGATGATACCAATTATGAAGAATTAAGATCCTACGT 1196
|||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||| |
Sbjct 1140 TGGTCCTATTGCGGTTGCAACCTTAGATGATACCAATTATGAAGCATTAAGATCTTACAT 1199
Query 1197 TCTCTCCTCACCAAACCCGCAAGGAACTATATTGAAGACCAATACAGTTAAAGACAATGG 1256
|||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1200 TCTCTCCTCACCAAACCCGCAAGGAACTATATTGAAGAGTGCGACAGTTAAAGATAATGA 1259
Query 1257 TGCTCCAGTCGTTCCTGCCTTCTCTTCTCGCGGTCCAAACACTCTCTTTAGTGACATTTT 1316
||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1260 TGCTCCAATTGTTCCTACCTTCTCTTCTCGCGGTCCAAACACTCTCTTTAGTGACATTTT 1319
Query 1317 GAGTAACGAACACTCAAAACGAAATAACCGA-CCTATGAGTCAATATATTAGCAGCATAT 1375
|| | | | || || ||||| | || | |||||||||||||||||||||||
Sbjct 1320 GA--A--G--C-CT------GATATAACAGCTCC-AGGAGTCAATATATTAGCAGCATAT 1365
Query 1376 TCACCACTGGCTCAAACCGCG-TTCCTGGACAAAGCGTGGATTACTATTTCATGACGGGA 1434
|||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 1366 TCACCATTGGCTCAAACCGCGCTTCCTGGACAAAGCGTGGATTACTATTTCATGACCGGA 1425
Query 1435 ACATCTATGGCTTGCCCTCATGTCGCAGGTGTAGCTGCTTATGTCAAGACACTACGTCCT 1494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1426 ACATCTATGGCTTGCCCTCATGTCGCAGGTGTAGCTGCTTATGTCAAGACACTACGTCCT 1485
Query 1495 GATTGGTCTGCTTCTGCCATCAAATCTGCTATCATGACTACCGCTTGGGCAATGAACGCT 1554
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct 1486 GATTGGTCTGCTTCTGCCGTCAAATCTGCTATCATGACTACTGCTTGGGCAATGAACGCT 1545
Query 1555 TCGAAAAATGCAGAAGCTGAGTTTGCATACGGATCAGGATTTGTTAACCCTACAGTGGCA 1614
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct 1546 TCGAAAAATGCAGAAGCTGAGTTTGCATATGGATCAGGATTTGTTAACCCTTCAGTGGCA 1605
Query 1615 GTTGATCCAGGGCTTGTTTACGAAATAGCCAAAGAGGATTACTTGAACATGCTTTGCTCT 1674
||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 1606 GTTGATCCAGGACTTGTTTACAAAATAGCCAAAGAGGATTACTTGAACGTGCTTTGCTCT 1665
Query 1675 TTGGACTACTCTTCTCAA-GGAATTAGTACCATTGCGGGTGGAACCTTTACTTGTTCTGA 1733
||||||||||| ||| || || |||||||| |||||||||||||| ||||||||||||||
Sbjct 1666 TTGGACTACTCATCT-AATGGCATTAGTACTATTGCGGGTGGAACTTTTACTTGTTCTGA 1724
Query 1734 ACAATCAAAGCTTACTATGAGAAATCTAAACTACCCTTCAATGTCAGCCAAAGTGTCAGC 1793
||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||
Sbjct 1725 ACAATCAAAGCTTACTATGAGAAATCTCAACTACCCTTCAATGGCAGCCAAAGTTTCAGC 1784
Query 1794 TTCATCGTCTTCAGATATCACTTTTTCAAGAACAGTCACCAACGTTGGGGAAAAGGGATC 1853
|||||| | | |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1785 TTCATC-T-T-CAGATATCACTTTTTCAAGAACAGTCACCAACGTTGGGAAAAAGGGATC 1841
Query 1854 CACTTACAAGGCAAAATTGTCTGG-GAATCCCAAACTCAGCATCAAGGTTGAGCC-AGCT 1911
|||||||||||||||||||||||| || |||||||||||| |||||||| || || | |
Sbjct 1842 CACTTACAAGGCAAAATTGTCTGGCGA-TCCCAAACTCAGTATCAAGGTCGAACCGAA-T 1899
Query 1912 ACACTCTCTTTCAAGGCGCCAGGGGAGAAGAAGTCTTTCACCGTTACAGTCTCTGGAAAG 1971
|| |||||||||||| | ||||||||||||||||||| |||||||||||||||||| |||
Sbjct 1900 ACGCTCTCTTTCAAGTCACCAGGGGAGAAGAAGTCTTACACCGTTACAGTCTCTGGCAAG 1959
Query 1972 AGTCTTGCGGGTATTTCTAATATTGTGTCGGCATCTCTGATTTGGTCGGATGGTTCACAC 2031
|||||||| |||||||||| |||||||||||| |||||||||||||||||||| ||||||
Sbjct 1960 AGTCTTGCTGGTATTTCTAGTATTGTGTCGGCGTCTCTGATTTGGTCGGATGGATCACAC 2019
Query 2032 AATGTGAGAAGTCCTATTGTTGTGTATACTTAG 2064
|||||||||||||||||||||||||||||||||
Sbjct 2020 AATGTGAGAAGTCCTATTGTTGTGTATACTTAG 2052
> Ahg890806 jgi|Araly1|890806|Al_scaffold_0007_2792
Length=2058
Score = 2427 bits (1314), Expect = 0.0
Identities = 1761/1973 (89%), Gaps = 45/1973 (2%)
Strand=Plus/Plus
Query 82 TCCGTTGAAGATTATTTGGTCAGAAGCTATGGAAGAAGTTTCAATGGTTTTGCAGCCAAA 141
||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 115 TCCGTTGAACATTCTTTGGTCAGAAGCTATGGAAGAAGTTTCAATGGTTTTGCAGCAAAA 174
Query 142 CTTACTGAATCTGAAAAAGATAAACTTATTGGCATGGAAGGTGTGGTTTCGGTATTCCCA 201
|||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct 175 CTTACTGAATCTGAAAGAGATAAACTTATGGGCATGGAAGGTGTGGTTTCGGTATTCCCA 234
Query 202 AGCACCGTTTATAAGCTTTTTACGACAAGGTCTTATGAGTTCATGGGACTTGGTGACAAG 261
| |||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||
Sbjct 235 AACACCGTTTATAAGCTTCTTACAACAAGATCTTATGAGTTCATGGGACTTGGTGACAAG 294
Query 262 AGCAACAATGTCCCTGAGGTCGAGAGCAATGTAATAGTAGGTGTAATAGACGGCGGAATC 321
|||||| |||||||| | || ||||||||| ||||||| |||||||| ||||||||||||
Sbjct 295 AGCAACCATGTCCCTAAAGTTGAGAGCAATATAATAGTTGGTGTAATCGACGGCGGAATC 354
Query 322 TGGCCTGAATCCAAAAGTTTTTCAGATGAAGGCATTGGCCCAATACCAAAGAAATGGAAA 381
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 355 TGGCCTGAATCCAAGAGTTTTTCAGACGAAGGCATTGGCCCAATACCAAAGAAATGGAAA 414
Query 382 GGAACTTGCGCAGGAGGAACTAATTTCACCTGCAATAGAAAGGTGATTGGAGCCCGACAC 441
|||||||| || |||||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct 415 GGAACTTGTGCTGGAGGAACCAATTTCACCTGCAATAGGAAGGTGATTGGAGCACGACAC 474
Query 442 TATGTGCACG-ACTCCGCAAGAGAC-AGTGACGCTCACGGGTCACACACGGCTTCAACAG 499
||||| || | | ||||| || ||| | || |||| ||||||||||||||||||||||
Sbjct 475 TATGTTCA-GAATTCCGCGAGGGACAAACAAC-CTCATGGGTCACACACGGCTTCAACAG 532
Query 500 CAGCAGGAAACAAAGTAAAAGGAGTGAGTGTGAACGGTGTGGCAGAAGGAACTGCAAGAG 559
| |||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||
Sbjct 533 CCGCAGGAAACAAAGTAAAAGGAGTGAGTGTGAACGGTGTGGTAAAAGGAACCGCAAGAG 592
Query 560 GTGGTGTGCCTTTAGGTAGAATTGCTGTTTACAAAGTGTGCGAGCCATTGGGTTGCAATG 619
||| ||| |||||||||||||||||| |||||| ||| ||||||||| ||||| ||||
Sbjct 593 GTGCTGTACCTTTAGGTAGAATTGCTATTTACAGAGTTTGCGAGCCAGCAGGTTGTAATG 652
Query 620 GTGAAC-GAATTTTGGCTGCGTTCGACGATGCTATAGCGGATGGGGTAGATGTTTTAACC 678
| || |||| ||||||||||| || ||||||||||| ||||| || |||||| |||||
Sbjct 653 CCG-ACGGAATGTTGGCTGCGTTTGATGATGCTATAGCCGATGGAGTCGATGTTATAACC 711
Query 679 ATTTCTCTTGGAGGCGGTGTTACTAAAGTTGACATTGACCCTATCGCTATTGGATCATTT 738
|||||| |||| || ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 712 ATTTCTATTGGTGGAGGTGTTACTAAAGTTGACATTGACCCTATCGCTATTGGATCGTTT 771
Query 739 CACGCGATGAC-CAAAGGGATTGTTACCAC-GGTAGCGGTTGGAAATGCCGGCACTGCA- 795
||||| ||| | |||||||||||||| || | | || |||||||| | |||| || |
Sbjct 772 CACGCAATG-CTGAAAGGGATTGTTACTACTGCT-GCTGTTGGAAACGACGGCTCTAAAC 829
Query 796 CTCGCAAAAGCGGATAACCTTGCACCATGGCTCATATCCGTGGCTGCTGGCTCTACTGAC 855
|| | |||||| |||||||||||| ||| ||||||||||||| || || || |||||
Sbjct 830 CT-GGAAAAGCATCTAACCTTGCACCGTGGATCATATCCGTGGCAGCAGGTTCAACTGAT 888
Query 856 AGAAAATTTGTTACTAATGTGGTTAATGGAGATGACAAGATGTTACCTGGAAGATCGATC 915
||||| |||||||||||||||||||||||||| | ||| | |||| ||||||||||||
Sbjct 889 AGAAAGTTTGTTACTAATGTGGTTAATGGAGAAGGCAAAACCATACCGGGAAGATCGATC 948
Query 916 AATGACTTTGACTTAGAGGGAAAGAAGTATCCTTTGGCGTATGGAAAAACTGCTTCAAAT 975
||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| |
Sbjct 949 AATGACTTTGACTTAAAAGGAAAGAAGTATCCTTTGGCTTATGGAAAAACTGCTTCAAGT 1008
Query 976 AACTGTACAGAGGAGCTAGCAAGGGGTTGCGCTAGCGGTTGCCTGAACACGGTGGAA-GG 1034
|||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| ||
Sbjct 1009 AACTGTACAGAGGAGCTAGCAAGGGGCTGCGCTAGCGGTTGCCTAAACACGGT-GAAGGG 1067
Query 1035 AAAGATTGTTGTGTGCGATGTTCCAAATAATGTTATGGAACAGAAAGCAGCGGGTGCGGT 1094
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1068 AAAGATTGTTGTGTGCGATGTTCCAAATAATGTTATGGAACAGAAAGCAGGGGGTGCGGT 1127
Query 1095 TGGAACTATCCTTCATGTAACTGATGTTGATACTCCCGGTCTTGGTCCTATTGCCGTTGC 1154
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 1128 TGGAACTATTCTTCATGTAACCGATGTTGATACTCCCGGTCTTGGTCCTATTGCGGTTGC 1187
Query 1155 AACCTTAGATGATACCAATTATGAAGAATTAAGATCCTACGTTCTCTCCTCACCAAACCC 1214
||||||||||||| |||||||||||| ||| ||||| |||||||||||||||||||||||
Sbjct 1188 AACCTTAGATGATTCCAATTATGAAGCATTCAGATCTTACGTTCTCTCCTCACCAAACCC 1247
Query 1215 GCAAGGAACTATATTGAAGACCAATACAGTTAAAGACAATGGTGCTCC-AGTCGTTCCT- 1272
||||||||||||||||||| |||||||||||||||| |||||| | ||||| ||
Sbjct 1248 ACAAGGAACTATATTGAAGAGTGGGACAGTTAAAGACAATGATGCTCCGA-TCGTTGCTA 1306
Query 1273 GCCTTCTCTTCTCGCGGTCCAAACACTCTCTTTAGTGACATTTTGAGTAACGAACACTCA 1332
| ||||||||||| |||||||||||||||||||| |||||||||| | | | |
Sbjct 1307 GT-TTCTCTTCTCGTGGTCCAAACACTCTCTTTAGCGACATTTTGA--A--G--C-CG-- 1356
Query 1333 AAACGAAATAACCGA-CCTATGAGTCAATATATTAGCAGCATATTCACCACTGGCTCAAA 1391
|| || || | || | |||| ||||||||||| |||||| ||||| |||||||||
Sbjct 1357 ----GATATTACAGCTCC-AGGAGTGAATATATTAGCGGCATATACACCATTGGCTCAAA 1411
Query 1392 CCGCG-TTCCTGGACAAAGCGTGGATTACTATTTCATGACGGGAACATCTATGGCTTGCC 1450
||||| ||||||||||||| || ||||||||||||||||| ||||||||||||||||| |
Sbjct 1412 CCGCGCTTCCTGGACAAAGTGTCGATTACTATTTCATGACTGGAACATCTATGGCTTGTC 1471
Query 1451 CTCATGTCGCAGGTGTAGCTGCTTATGTCAAGACACTACGTCCTGATTGGTCTGCTTCTG 1510
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1472 CTCATGTCGCAGGTGTAGCTGCTTATGTCAAGACACTACGTCCTGATTGGTCCGCTTCTG 1531
Query 1511 CCATCAAATCTGCTATCATGACTACCGCTTGGGCAATGAACGCTTCGAAAAATGCAGAAG 1570
|| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 1532 CCGTCAAATCTGCTATCATGACTACCGCTTGGGCAATGAACGTTTCGAAAAATGCAGATG 1591
Query 1571 CTGAGTTTGCATACGGATCAGGATTTGTTAACCCTACAGTGGCAGTTGATCCAGGGCTTG 1630
|||||||||| || |||||||||| |||||||||| |||| |||||||| ||||| ||||
Sbjct 1592 CTGAGTTTGCGTATGGATCAGGATATGTTAACCCTTCAGTAGCAGTTGAGCCAGGACTTG 1651
Query 1631 TTTACGAAATAGCCAAAGAGGATTACTTGAACATGCTTTGCTCTTTGGACTACTCTTCTC 1690
|||||||||| || ||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 1652 TTTACGAAATCGCTAAAGAGGATTACTTGAACATGCTTTGCTCTTTGGACTACTCATC-C 1710
Query 1691 AA-GGAATTAGTAC-CATTGCGGGTGGAACCTTTACTTGTTCTGAACAATCAAAGCTTAC 1748
|| || |||||||| | | |||||||| |||||||||||||||||||||| ||||||||
Sbjct 1711 AAAGGCATTAGTACTC-TCGCGGGTGGTTCCTTTACTTGTTCTGAACAATCTAAGCTTAC 1769
Query 1749 TATGAGAAATCTAAACTACCCTTCAATGTCAGCCAAAGTGTCAG-CTTCATCGTCTTCAG 1807
||||||||| || |||||||| ||||| |||||||||| |||| || |||| |||||||
Sbjct 1770 TATGAGAAACCTCAACTACCCAGCAATGACAGCCAAAGTTTCAGGCT-CATCATCTTCAG 1828
Query 1808 ATATCACTTTTTCAAGAACAGTCACCAACGTTGGGGAAAAGGGATCCACTTACAAGGCAA 1867
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||
Sbjct 1829 ATATCACTTTTTCAAGAACCGTCACAAACGTTGGGGAAAAGGGATCCACTTACAAG-CAA 1887
Query 1868 AATTGTCTGGGAATCCCAAACTCAGCATCAAGGTTGAGCCAGCTACACTCTCTTTCAAGG 1927
|||||||||||||||| ||||||||||||||||||||||||| || |||| |||||||
Sbjct 1888 AATTGTCTGGGAATCCAAAACTCAGCATCAAGGTTGAGCCAGAGACTCTCTATTTCAAGT 1947
Query 1928 CGCCAGGGGAGAAGAAGTCTTTCACCGTTACAGTCTCTGGAAAGAGTCTTGCGGGTATTT 1987
| || |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||
Sbjct 1948 CACCGGGGGAGAAGAAGTCTTTCACTGTTACAGTCTCTGGCAAGAGTCTTGCTGGTATTT 2007
Query 1988 CTAATATTGTGTCGGCATCTCT-GATTTGGTCGGATGG-TTCACACAATGTGA 2038
||| |||||||||||| ||||| | ||||||||||||| || || ||||||||
Sbjct 2008 CTAGTATTGTGTCGGCGTCTCTTG-TTTGGTCGGATGGATT-ACGCAATGTGA 2058
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77627919310
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5