BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G15230.1
Length=4316
Score E
Sequences producing significant alignments: (Bits) Value
Ahg329987 jgi|Araly1|329987|fgenesh1_pm.C_scaffold_7002214 5668 0.0
Ahg890779 jgi|Araly1|890779|Al_scaffold_0007_2765 1640 0.0
Ahg355259 jgi|Araly1|355259|fgenesh1_pg.C_scaffold_7002432 1404 0.0
> Ahg329987 jgi|Araly1|329987|fgenesh1_pm.C_scaffold_7002214
Length=4158
Score = 5668 bits (3069), Expect = 0.0
Identities = 3785/4133 (92%), Gaps = 40/4133 (1%)
Strand=Plus/Plus
Query 201 GAGCTTCGGTTGCAGTGGGCAACAGTTGAGAGATTACCAACTTTTAAAAGGGTTACTACT 260
||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 49 GAGATTCGGTCGCAGTGGGCAACAGTTGAGAGATTACCAACTTTTAAAAGGGTTACTACT 108
Query 261 GCTTTGTT---GGCAAGAGATGAAGTGTCAGGGAAAGGGCGAGTCATTGATGTTACTAGA 317
|||||||| |||||||||| | |||| | | | || |||||||||||| |
Sbjct 109 GCTTTGTTACACACAAGAGATGATGCGTCA--G--A----TA-TCGTTGATGTTACTAAA 159
Query 318 CTTGAGGGTGCTGAGAGACGCTTGTTGATTGA-AATGCTCGTTAAACAAATCGAGGATGA 376
|||||||||||||||||||||||||| ||||| || |||||| ||||||||||||| |||
Sbjct 160 CTTGAGGGTGCTGAGAGACGCTTGTTAATTGAGAA-GCTCGTCAAACAAATCGAGGTTGA 218
Query 377 TAATCTCCGTTTACTCAGAAAAATAAGGAAGAGAATTGACAAAGTTGGTATAGAGTTGCC 436
||| || |||||||||||||| |||||||||||||| ||| |||||||||||||||| ||
Sbjct 219 TAACCTTCGTTTACTCAGAAATATAAGGAAGAGAATCGACGAAGTTGGTATAGAGTTACC 278
Query 437 AACGGTGGAAGTGAGGTTCAATAACCTTTCTGTTGAGGCGGAATGCCAAGTAATTCATGG 496
|||||||||||||||||||||| |||| |||||||| ||||||||| |||||||||||||
Sbjct 279 AACGGTGGAAGTGAGGTTCAATGACCTCTCTGTTGAAGCGGAATGCGAAGTAATTCATGG 338
Query 497 AAAGCCTATCCCAACTCTTTGGAATACTATCAAGGGCTTACTATCTGAGTTCATTTGTTC 556
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 339 AAAGCCTATCCCAACTCTTTGGAATACTATCAAGGGCATATTATCTGAGTTCATTTGTTC 398
Query 557 TAAGAAAGAAACCAAGATAGGCATCTTGAAAGGAGTGAGTGGAATCGTAAGGCCTGGAAG 616
|||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct 399 AAAGAAAGAAACCAAGATAAGCATCTTGAAAGGCGTGAGTGGAATCGTAAGGCCTGGAAG 458
Query 617 AATGACGTTGTTGCTCGGTCCTCCTGGTTGCGGTAAAACTACTCTGTTACAAGCACTTTC 676
|||||||||||| || |||||||||||||| |||||||| |||||| |||| ||||||||
Sbjct 459 AATGACGTTGTTACTTGGTCCTCCTGGTTGTGGTAAAACCACTCTGCTACAGGCACTTTC 518
Query 677 TGGAAAATTTTCCGATTCTGTAAAGGTTGGAGGAGAAGTATGTTACAATGGTTGCTCACT 736
||||| | ||||| |||||||||||||||||||||||||| |||| || ||||||| |||
Sbjct 519 TGGAAGACTTTCCCATTCTGTAAAGGTTGGAGGAGAAGTAAGTTATAACGGTTGCTTACT 578
Query 737 CTCAGAGTTTATTCCGGAGAAAACGTCGAGTTATATAAGTCAAAACGATCTGCATATTCC 796
|||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||
Sbjct 579 TTCAGAGTTTATTCCAGAAAAAACGTCGAGTTATATAAGTCAAAATGATCTGCATATTCC 638
Query 797 TGAGCTGAGTGTAAGAGAGACACTTGACTTCTCTGCGTGTTGTCAGGGCATCGGAAGCCG 856
||||||||||| |||||||| || ||||||||||| ||||| || ||||| ||||||||
Sbjct 639 AGAGCTGAGTGTGAGAGAGACGCTCGACTTCTCTGCATGTTGCCAAGGCATAGGAAGCCG 698
Query 857 TATGGAAATTATGAAAGAGATCAGTAGAATGGAAAAACTCCAAGAAATCATTCCAGATCC 916
||| ||||||||||||||||||||||||| ||| |||||| ||||||| ||||||||||
Sbjct 699 TATTGAAATTATGAAAGAGATCAGTAGAAGGGAGAAACTCAAAGAAATTGTTCCAGATCC 758
Query 917 TGCTGTAGATGCTTACATGAAGGCAACATCTGTTGAAGGTTTGAAAAACAATTTGCAAAC 976
|| | ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct 759 TGATATAGATGCTTACATGAAGGCAATATCTGTTGAAGGTTTGAAAAACAATATGCAAAC 818
Query 977 TGACTATATCCTAAAGATCCTGGGACTCGATATCTGTGCAGATACAAGAGTTGGAGATGC 1036
||||||||| ||||||||||| |||||||||||||||||||||||| ||| |||||||||
Sbjct 819 TGACTATATTCTAAAGATCCTTGGACTCGATATCTGTGCAGATACACGAGCTGGAGATGC 878
Query 1037 CACGAGACCTGGAATATCTGGTGGCGAGAAGAGGAGGTTGACAACAGGGGAACTCGTTGT 1096
||| ||||||||||||||||||||| | |||||||||||||||||||| ||| | |||||
Sbjct 879 CACAAGACCTGGAATATCTGGTGGCCAAAAGAGGAGGTTGACAACAGGTGAAATTGTTGT 938
Query 1097 GGGTCCAGCTACCACCCTCTTTATGGATGAAATATCCAATGGTTTAGACAGCTCAACTAC 1156
|||||||||||| || || || |||||||||||||| |||||||| ||||||||||||||
Sbjct 939 GGGTCCAGCTACTACTCTGTTCATGGATGAAATATCGAATGGTTTGGACAGCTCAACTAC 998
Query 1157 GTTCCAAATAGTGTCATGTCTCCAACAGTTGGCACATATAGCTGAAGCCACCATACTGAT 1216
|||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 999 GTTCCAGATAGTGTCGTGTCTCCAACAGTTGGCGCATATAGCTGAAGCCACCATACTGAT 1058
Query 1217 TTCACTTCTTCAGCCTGCACCAGAAACGTTTGAGCTTTTTGACGATGTGATTCTTATGGG 1276
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1059 TTCACTTCTTCAGCCTGCACCAGAAACATTTGAGCTTTTTGACGATGTGATTCTTATGGG 1118
Query 1277 GGAAGGAAAGATAATTTACCATGCTCCACGCGCTGATATCTGCAGATTCTTTGAAGAGTT 1336
|||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||
Sbjct 1119 GGAAGGAAAGATAATTTACCATGCTCCACGAGCTGATATCGGCAGATTCTTTGAAG-GTT 1177
Query 1337 -TGGATTTAAGTGTCCAGAGAGAAAAGGCGTTGCTGACTTTCTCCAAGAGATTATGTCGA 1395
||||||||| |||||||||||||||||||| |||||||| || || ||| ||||||| |
Sbjct 1178 GTGGATTTAAATGTCCAGAGAGAAAAGGCGTCGCTGACTTCCTTCAGGAGGTTATGTCTA 1237
Query 1396 -AAAAGGACCAAGAACAATATTGGTGCCACA-GAGACAAGCCCTACAGTTATATATCTGT 1453
|||| || |||||||||||||||||||||| || ||||||||| ||||||||||||||
Sbjct 1238 GAAAA-GATCAAGAACAATATTGGTGCCACATAAG-CAAGCCCTATAGTTATATATCTGT 1295
Query 1454 TGATTCCTTCATTAATAAGTTTAAAGAATCAAATCTTGGGTTGCTGCTA-AAGGAAGAAC 1512
|||||| |||||||| |||||||||||||||||||||||||| |||| | || |||||||
Sbjct 1296 TGATTCATTCATTAAGAAGTTTAAAGAATCAAATCTTGGGTTTCTGC-AGAAAGAAGAAC 1354
Query 1513 TGTCAAAGCCGTTTAATAAGTCCCAGACTCGCAAGGATGGTTTATGTTATAAAAAATATT 1572
||||||||||||| |||| |||||||||| || ||||||| |||||| || |||||| |
Sbjct 1355 TGTCAAAGCCGTTCGATAAATCCCAGACTCACATGGATGGTCTATGTTTTAGAAAATACT 1414
Query 1573 CACTGGGTAAGTGGGAGATGCTTAAAGCTTGCTCAAGGAGAGAATTTCTTTTAATGAAAC 1632
|||||||||| |||||||||||||||||||| || ||||||||||||||||| |||||||
Sbjct 1415 CACTGGGTAAATGGGAGATGCTTAAAGCTTGTTCGAGGAGAGAATTTCTTTTGATGAAAC 1474
Query 1633 GGAATTCTTTCATTTACTTGTTCAAATCTGCACTGTTAGTTTTTAATGCGTTAGTCACAA 1692
||||||||| |||||||||||||||||||| ||| ||||| || ||||||||||||||||
Sbjct 1475 GGAATTCTTCCATTTACTTGTTCAAATCTGGACTATTAGTGTTCAATGCGTTAGTCACAA 1534
Query 1693 TGACCGTTTTTCTACAAGTTGGTGCGACGACGGATTCTCTTCATGGGAATTATCTGATGG 1752
||||| |||||||||||| ||| || |||| |||| ||| ||||||||||||||| ||||
Sbjct 1535 TGACCATTTTTCTACAAGCTGGAGCTACGAGGGATGCTCGTCATGGGAATTATCTTATGG 1594
Query 1753 GTTCTCTATTCACTGCTCTCTTTAGACTTCTTGCCGATGGGCTTCCAGAACTCACTCTT- 1811
||||| | ||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1595 GTTCTATGTTCTCTGCTCTCTTTAGACTTCTTGCCGATGGGCTTCCAGAACTCACT-TTG 1653
Query 1812 ACTATCTCCAGACTT-GGTGTGTTCTGCAAACAGAAAGATTTGTACTTCTATCCTGCTTG 1870
|||||||| ||| || || ||||||||||||||||||||||| || ||||||||||||||
Sbjct 1654 ACTATCTCTAGA-TTGGGAGTGTTCTGCAAACAGAAAGATTTATATTTCTATCCTGCTTG 1712
Query 1871 GGCATATGCGATTCCTTCAATTATCTTAAAGATACCTCTATCGGTTCTCGATTCATTCAT 1930
||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct 1713 GGCATATGCAATTCCTTCAATTATCTTAAGGATACCTCTTTCGGTTCTCGATTCATTCAT 1772
Query 1931 CTGGACATTACTGACATATTATGTCATTGGTTACAGCCCCGAGGTCAAAAGGTTCTTCCT 1990
||||||| |||||||||||||||||||||||| || ||||| ||| |||||||||||
Sbjct 1773 TTGGACATCACTGACATATTATGTCATTGGTTATAGTCCCGAAGTCGGAAGGTTCTTCCG 1832
Query 1991 GCAGTTCCTTATCTTATC-TACATTCAACCTTTCTTGTGTATCAATGTTTCGCGCTATTG 2049
||| ||| |||||||| | ||| ||| ||||||| ||| ||||||||||||||||||| |
Sbjct 1833 GCATTTCATTATCTTA-CTTACTTTCCACCTTTCATGTATATCAATGTTTCGCGCTATAG 1891
Query 2050 CGGCAATCTTTCGCACAATTATTGCTTCCACAATCACTGGAGCTATTTCCATATTGGTTC 2109
|| |||||| ||| ||| || |||||| | ||||||||||||||||||| |||||||||
Sbjct 1892 CGTCAATCTGTCGTACATTTGTTGCTTGCTCAATCACTGGAGCTATTTCGGTATTGGTTC 1951
Query 2110 TCTCATTATTTGGTGGCTTCGTTATTCCAAAATCATCAATGCCTGCTTGGCTGGGATGGG 2169
|| ||||||| || |||||| ||||||||||||| || |||||| |||||||||| ||||
Sbjct 1952 TCGCATTATTCGGAGGCTTCATTATTCCAAAATCGTCCATGCCTACTTGGCTGGGTTGGG 2011
Query 2170 GATTCTGGCTTTCTCCCTTGTCATATGCCGAGATTGGTCTAACCGCAAATGAATTTTTCT 2229
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2012 GATTCTGGCTTTCTCCCTTGTCATATGCTGAGATTGGTCTAACCGCAAATGAATTTTTCG 2071
Query 2230 CTCCACGATGGAGCAAGGTAATCTCTAGCAAGACTACGGCTGGGGAACAAATGTTAGATA 2289
|||| || ||||| ||| |||||||| |||| ||||| || ||||||||| ||||||||
Sbjct 2072 CTCCGCGGTGGAGAAAGTTAATCTCTGGCAACACTACAGCCGGGGAACAAGTGTTAGATG 2131
Query 2290 TTCGTGGGTTGAATTTCGGTAGGCACTCTTACTGGACAGCTTTTGGTGCTTTAGTCGGCT 2349
| ||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| |
Sbjct 2132 TCCGTGGATTGAATTTTGGTAGGCACTCTTACTGGACAGCTTTTGGTGCTTTAATCGGGT 2191
Query 2350 TTGTCTTGTTTTTCAATGCCCTCTACGTGTTGGCCCTAACGTATCAGAATAATCCCCAAA 2409
|||||||||| ||||||| ||||||| ||||||||| || |||| ||||||||| ||||
Sbjct 2192 TTGTCTTGTTCTTCAATGTCCTCTACACGTTGGCCCTGACATATCGGAATAATCCACAAA 2251
Query 2410 GATCCCGTGCTATCATCTCACATGAAAAGTACTCTC-G-GCCCATAGAAGAAGATTTTAA 2467
||||||||||||| ||||| |||| |||| |||||| | || | || ||||||||||||
Sbjct 2252 GATCCCGTGCTATTATCTCGCATGGAAAGAACTCTCAGTGCTC--AGTAGAAGATTTTAA 2309
Query 2468 ACCCTGCCCTAAAATCACTTCTCGAGCTAAAACAGGAAAAATTATCTTGCCTTTTAAGCC 2527
|||||||||| |||||||||| ||||||||||||||||| ||| |||||| ||||||||
Sbjct 2310 ACCCTGCCCTGAAATCACTTCGAGAGCTAAAACAGGAAAAGTTAGCTTGCCCTTTAAGCC 2369
Query 2528 ACTCACTGTCACATTTCAAAACGTGCAGTATTATATTGAAACTCCTCAGGGAAAGACGCG 2587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2370 ACTCACTGTCACATTTCAAAACGTGCAGTATTATATTGAAACTCCTCAGGGAAAGACGCG 2429
Query 2588 ACAACTTCTCTCTGATATAACAGGCGCGTTGAAGCCCGGAGTTCTCACATCTCTGATGGG 2647
||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||
Sbjct 2430 GCAACTTCTCTCTGATATTACAGGCGCGTTGAAGCCCGGAGTTCTCACGTCTCTAATGGG 2489
Query 2648 TGTCAGTGGAGCAGGGAAAACGACTCTTCTTGATGTCCTTTCGGGAAGAAAAACTCGCGG 2707
|||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct 2490 TGTCAGTGGAGCAGGGAAAACGACTCTTCTTGATGTCCTTTCTGGAAGGAAAACCCGCGG 2549
Query 2708 TATCATCAAAGGAGAGATCAAAGTAGGCGGGTATCCTAAGGTTCAAGAAACATTTGCACG 2767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2550 TATCATCAAAGGAGAGATCAAAGTAGGCGGGTATCCTAAGGTTCAAGAAACATTTGCACG 2609
Query 2768 AGTATCAGGTTACTGTGAACAGTTTGATATTCATTCTCCTAATATAACTGTGGAAGAGTC 2827
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2610 AGTATCAGCTTACTGTGAACAGTTTGATATTCATTCTCCTAATATAACTGTGGAAGAGTC 2669
Query 2828 TTTGAAATATTCTGCATGGCTTCGACTCCCCTATAACATAGATTCAAAGACAAAGAACGA 2887
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct 2670 TTTGAAATATTCTGCATGGCTTCGACTCCCCTATAACATCGATTTAAAGACAAAGAACGA 2729
Query 2888 ACTCGTCAAAGAAGTCCTCGAGACAGTTGAGCTTGATGAC-ATCAAAGATTCCGTGGTGG 2946
|||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||
Sbjct 2730 ACTCGTCAAAGAAGTCCTCGAGACAGTTGAGCTTGA-GAATATCAAAGATTCCATGGTGG 2788
Query 2947 GACTTCCGGGAATAAGTGGTTTATCTATAGAACAACGCAAAAGGCTGACTATAGCCGTGG 3006
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2789 GACTTCCTGGAATAAGTGGTTTATCTACAGAACAACGCAAAAGGCTGACTATAGCCGTGG 2848
Query 3007 AGCTTGTTGCTAACCCTTCCATCATATTTATGGATGAACCTACCACAGGGCTGGACGCAA 3066
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2849 AGCTTGTTGCTAACCCTTCCATCATATTTCTGGATGAACCTACCACAGGGCTGGACGCAA 2908
Query 3067 GAGCCGCCGCCATTGTTATGAGAGCTGTCAAAAATGTTGCTGAGACTGGGAGAACGGTTG 3126
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2909 GAGCCGCAGCCATTGTTATGAGAGCTGTGAAAAATGTTGCTGAGACTGGGAGAACGGTTG 2968
Query 3127 TTTGCACGATCCACCAGCCGAGCATAGATATCTTTGAGACATTTGATGAGCTGATCCTAA 3186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2969 TTTGCACGATCCACCAGCCGAGCATAGATATCTTTGAGACATTTGATGAGCTGATCCTGT 3028
Query 3187 TGAAAAATGGGGGACAGCTTGTCTACTATGGTCCTCCTGGACAGA-ATTCAAGTAAGGTT 3245
||||| |||||||||| ||||||||||||||||||| |||| | | ||||||||||||||
Sbjct 3029 TGAAAGATGGGGGACATCTTGTCTACTATGGTCCTCTTGGAAA-ACATTCAAGTAAGGTT 3087
Query 3246 ATCGAATACTTCGAGAGCTTCTCTGGACTTCCCAA-GATCCAAAAGAATTGTAATCCAGC 3304
||||||||||| |||||| || ||||| |||| || | || |||||||||||||||||||
Sbjct 3088 ATCGAATACTTTGAGAGCGTCCCTGGAGTTCCAAAAGTTC-AAAAGAATTGTAATCCAGC 3146
Query 3305 CACTTGGATCTTAGATATTACTAGTAAATCTGCAGAGGAAAAACTTGGAATAGATTTTTC 3364
||||||||| |||||||||||| |||||||||||||||| | ||||||||| |||||| |
Sbjct 3147 CACTTGGATGTTAGATATTACTTGTAAATCTGCAGAGGACAGACTTGGAATGGATTTTGC 3206
Query 3365 ACAATCATACAAGGATTCAACTCTGTATAAGCAGAACAAAATGGTGGTTGAGCAACTGAG 3424
|||| ||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 3207 ACAAGCATACAAAGATTCAACTCTGTACAAGGAGAACAAAATGGTGGTTGAGCAACTGAG 3266
Query 3425 TTCTGCGTCTCTGGGATCAGAAGCTTTGAGGTTTCCTTCGCAATTTTCACAAACAGCTTG 3484
||||||||||||||||||| ||||| |||| |||||||||| ||||||||||||| |||
Sbjct 3267 TTCTGCGTCTCTGGGATCAAAAGCTCTGAGCTTTCCTTCGCGTTTTTCACAAACAGGTTG 3326
Query 3485 GGTGCAACTAAAGGCTTGCCTTTGGAAACAACATTACTCGTATTGGAGAAACCCTTCACA 3544
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct 3327 GGAGCAACTAAAGGCTTGCCTTTGGAAACAACATTGCTCGTATTGGAGAAACCCTTCGCA 3386
Query 3545 CAATATAACTCGCATAGTCTTCATATTGCTCGATTCTAC-GTTATGTGGCCTTCTCTTCT 3603
||| | |||||||||||||||||| ||||| ||||| | ||||| ||||||||||||||
Sbjct 3387 TAATCTCACTCGCATAGTCTTCATAATGCTCAATTCT-CTGTTATCTGGCCTTCTCTTCT 3445
Query 3604 GGCAAAAAGCTGAGGACATAAATAATCAGCAAGATCTTATCAGCATATTTGGATCCATGT 3663
||||||||||| |||||||||||||||||||||||||| ||||||||||||| || ||||
Sbjct 3446 GGCAAAAAGCTAAGGACATAAATAATCAGCAAGATCTTTTCAGCATATTTGGCTCAATGT 3505
Query 3664 ACACTCTAGTAGTCTTCCCGGGAATGAACAACTGTGCGGCAGTGATAAACTTCATTGCAG 3723
||||||||||| ||||| | ||||| |||||||||||| ||||||| ||||||||||||
Sbjct 3506 ACACTCTAGTAATCTTCTCAGGAATAAACAACTGTGCGACAGTGATGAACTTCATTGCAA 3565
Query 3724 CCGAACGCAATGTTTTCTACCGTGAAAGGTTTGCACGGATGTACTCCTCATGGGCGTATT 3783
| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 3566 CTGAACGCAATGTTTTCTATCGTGAAAGGTTTGCGCGGATGTACTCCTCATGGGCGTATT 3625
Query 3784 CATTTTCTCAGGTCCTAATTGAGGTTCCATACTCACTACTCCAGTCCCTACTATGTACGA 3843
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 3626 CATTTTCTCAGGTCCTAGTTGAGGTTCCATACTCACTACTCCAGTCCCTACTATGTACTA 3685
Query 3844 TAATTGTATATCCTACGATCGGCTACCATATGTCCGTTTACAAGATGTTTTGGAGCTTGT 3903
| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3686 TCATTGTATATCCTATGATCGGCTACCATATGTCTGTTTACAAGATGTTTTGGAGCTTGT 3745
Query 3904 ACAGCATCTTCTGCTCGTTACTCATCTTCAACTACAGTGGGATGCTTATGGTTGCTTTGA 3963
|||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 3746 ACAGCATCTTCTGCTCGTTACTTATCTTCAACTATTGTGGGATGCTTATGGTTGCTTTGA 3805
Query 3964 CGCCAAACATTCACATGGCAGTGACTCTACGCTCATCTTTTTTCTCCATGTTAAATCTGT 4023
|||||||||||||||||||| | ||| |||||||| |||||||||||||| | |||||||
Sbjct 3806 CGCCAAACATTCACATGGCATTAACTTTACGCTCAACTTTTTTCTCCATGGTGAATCTGT 3865
Query 4024 TTGCTGGCTTTGTCATTCCAAAACAGAAAATCCCAAAATGGTGGATATGGATGTACTACC 4083
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3866 TTGCTGGCTTTGTCATGCCAAAACAGAAAATCCCAAAATGGTGGATATGGATGTACTACT 3925
Query 4084 TGAGCCCGACATCATGGGTGTTGGAAGGATTACTGAGTTCGCAATATGGAGATGTCGACA 4143
||||||||||||| |||| |||||||||||||||||||| || ||||||||||| || |
Sbjct 3926 TGAGCCCGACATCGTGGGCATTGGAAGGATTACTGAGTTCACAGTATGGAGATGTGGAGA 3985
Query 4144 AAGAGATATTAGTATTTGGAGAGAAGAAGAGAGTTTCAGCTTTCTTGGAGGATTACTTTG 4203
|||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 3986 AAGAGATAATAGTATTTGGAGAGAAGAAGAGAGTTTCAGCTTTCTTGGAGGACTACTTCG 4045
Query 4204 GTTACAAACATGAATCATTGGCTGTTGTGGCGTTTGTTCTCATCGCTTATCCCATTATCG 4263
||||||||||||| || ||||||||||| |||||||||||||||| || ||| |||||||
Sbjct 4046 GTTACAAACATGACTCCTTGGCTGTTGTAGCGTTTGTTCTCATCGGTTTTCCTATTATCG 4105
Query 4264 TGGCAACTCTTTTTGCCTTCTTCATGAGCAAACTCAGTTTCCAAAAGAAATAG 4316
| || |||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 4106 TTGCTTCTCTTTTTGCCTTCTTCATGAGCAAACTCAATTTTCAAAAGAAATAG 4158
> Ahg890779 jgi|Araly1|890779|Al_scaffold_0007_2765
Length=3450
Score = 1640 bits (888), Expect = 0.0
Identities = 1018/1082 (94%), Gaps = 4/1082 (0%)
Strand=Plus/Plus
Query 1668 TTAGTTTTTAATGCGTTAGTCACAATGACCGTTTTTCTACAAGTTGGTGCGACGACGGAT 1727
||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct 1072 TTAGTTTTTAATGCGTTAGTCACAATGACCGTTTTTCTACAAGCTGGTGCTACGACGGAT 1131
Query 1728 TCTCTTCATGGGAATTATCTGATGGGTTCTCTATTCACTGCTCTCTTTAGACTTCTTGCC 1787
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1132 TCTCCACATGGGAATTATCTTATGGGTTCTCTATTCACTGCTCTCTTTAGACTTCTTGCT 1191
Query 1788 GATGGGCTTCCAGAACTCACTCTT-ACTATCTCCAGACTT-GGTGTGTTCTGCAAACAGA 1845
||||||||||||||||||||| || |||||||| ||| || || |||||||||||||| |
Sbjct 1192 GATGGGCTTCCAGAACTCACT-TTGACTATCTCTAGA-TTGGGAGTGTTCTGCAAACATA 1249
Query 1846 AAGATTTGTACTTCTATCCTGCTTGGGCATATGCGATTCCTTCAATTATCTTAAAGATAC 1905
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1250 AAGATTTATACTTCTATCCTGCTTGGGCATATGCAATTCCTTCAATTATCTTAAAGATAC 1309
Query 1906 CTCTATCGGTTCTCGATTCATTCATCTGGACATTACTGACATATTATGTCATTGGTTACA 1965
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1310 CTCTTTCGGTTCTCGATTCATTCATCTGGACATTACTGACATATTATGTCATTGGTTACA 1369
Query 1966 GCCCCGAGGTCAAAAGGTTCTTCCTGCAGTTCCTTATCTTATCTACATTCAACCTTTCTT 2025
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 1370 GCCCCGAGGTCAAAAGGTTCTTCCTGCACTTCCTTATCTTATCTACATTCAACCTTTCAT 1429
Query 2026 GTGTATCAATGTTTCGCGCTATTGCGGCAATCTTTCGCACAATTATTGCTTCCACAATCA 2085
|||||| ||||||||||||||| |||||||| |||| ||||||| |||||||||||||||
Sbjct 1430 GTGTATTAATGTTTCGCGCTATAGCGGCAATATTTCACACAATTGTTGCTTCCACAATCA 1489
Query 2086 CTGGAGCTATTTCCATATTGGTTCTCTCATTATTTGGTGGCTTCGTTATTCCAAAATCAT 2145
|||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||
Sbjct 1490 CTGGAGCTATTTCCATATTGGTTCTCTCATTATTCGGCGGCTTCATTATTCCAAAATCAT 1549
Query 2146 CAATGCCTGCTTGGCTGGGATGGGGATTCTGGCTTTCTCCCTTGTCATATGCCGAGATTG 2205
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1550 CAATGCCTGCTTGGCTGGGATGGGGATTCTGGCTTTCTCCCTTGTCATATGCTGAGATTG 1609
Query 2206 GTCTAACCGCAAATGAATTTTTCTCTCCACGATGGAGCAAGGTAATCTCTAGCAAGACTA 2265
|||||| |||||||||||||||||| ||||| ||||||||| |||||||| |||| ||||
Sbjct 1610 GTCTAAGCGCAAATGAATTTTTCTCCCCACGGTGGAGCAAGTTAATCTCTGGCAACACTA 1669
Query 2266 CGGCTGGGGAACAAATGTTAGATATTCGTGGGTTGAATTTCGGTAGGCACTCTTACTGGA 2325
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1670 CGGCCGGGGAACAAATGTTAGATATCCGTGGGTTGAATTTCGGTAGGCACTCTTACTGGA 1729
Query 2326 CAGCTTTTGGTGCTTTAGTCGGCTTTGTCTTGTTTTTCAATGCCCTCTACGTGTTGGCCC 2385
|||||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||
Sbjct 1730 CAGCTTTTGGTGCTTTAGTCGGGTTTGTCTTGTTCTTCAATGCACTCTATGTGTTGGCCC 1789
Query 2386 TAACGTATCAGAATAATCCCCAAAGATCCCGTGCTATCATCTCACATGAAAAGTACTCTC 2445
||||||||||||||||||| |||||||||||||||| |||| |||| ||||||||||
Sbjct 1790 TAACGTATCAGAATAATCCGAAAAGATCCCGTGCTATGGTCTCGCATGGGAAGTACTCTC 1849
Query 2446 GGCCCATAGAAGAAGATTTTAAACCCTGCCCTAAAATCACTTCTCGAGCTAAAACAGGAA 2505
|| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct 1850 AGCGCATAGAAGAAGATTTTAAACCCTGCCCTGAAATCACTTCCCGAGCTAAAACAGGAA 1909
Query 2506 AAATTATCTTGCCTTTTAAGCCACTCACTGTCACATTTCAAAACGTGCAGTATTATATTG 2565
|| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1910 AAGTTATCTTGCCTTTTAAGCCCCTCACTGTCACATTTCAAAACGTGCAGTATTATATTG 1969
Query 2566 AAACTCCTCAGGGAAAGACGCGACAACTTCTCTCTGATATAACAGGCGCGTTGAAGCCCG 2625
| |||||||||||||||||| | ||||||||||||||| | |||||||||||||||||||
Sbjct 1970 AGACTCCTCAGGGAAAGACGTGGCAACTTCTCTCTGATGTTACAGGCGCGTTGAAGCCCG 2029
Query 2626 GAGTTCTCACATCTCTGATGGGTGTCAGTGGAGCAGGGAAAACGACTCTTCTTGATGTCC 2685
| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2030 GTGTTCTCACATCTCTAATGGGTGTCAGTGGAGCAGGGAAAACGACTCTTCTTGATGTTC 2089
Query 2686 TTTCGGGAAGAAAAACTCGCGGTATCATCAAAGGAGAGATCAAAGTAGGCGGGTATCCTA 2745
|||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 2090 TTTCTGGAAGGAAAACCCGGGGTATCATCAAAGGAGAGATCAAAGTAGGCGGGTATCCTA 2149
Query 2746 AG 2747
||
Sbjct 2150 AG 2151
Score = 1105 bits (598), Expect = 0.0
Identities = 663/695 (95%), Gaps = 2/695 (0%)
Strand=Plus/Plus
Query 3623 AAATAATCAGCAAGATCTTATCAGCATATTTGGATCCATGTACACTCTAGTAGTCTTCCC 3682
||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct 2757 AAATAATCAGCAAGATCTTATCAGCATATTTGGTTCCATGTACACTCTAGTAATCTTCCC 2816
Query 3683 GGGAATGAACAACTGTGCGGCAGTGATAAACTTCATTGCAGCCGAACGCAATGTTTTCTA 3742
||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||
Sbjct 2817 GGGAATGAACAACTGTGGGGCAGTGATAAACTTCGTTGCAGCGGAACGCAATGTTTTCTA 2876
Query 3743 CCGTGAAAGGTTTGCACGGATGTACTCCTCATGGGCGTATTCATTTTCTCAGGTCCTAAT 3802
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2877 CCGTGAAAGGTTTGCACGGATGTACTCCTCATGGGCGTATTCATTTTCTCAGGTCCTAGT 2936
Query 3803 TGAGGTTCCATACTCACTACTCCAGTCCCTACTATGTACGATAATTGTATATCCTACGAT 3862
|||||||||||||||||||||||||||| | |||||||| ||||| |||||||||| |||
Sbjct 2937 TGAGGTTCCATACTCACTACTCCAGTCCGTTCTATGTACAATAATCGTATATCCTATGAT 2996
Query 3863 CGGCTACCATATGTCCGTTTACAAGATGTTTTGGAGCTTGTACAGCATCTTCTGCTCGTT 3922
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2997 CGGCTACCATATGTCAGTTTACAAGATGTTTTGGAGCTTGTACAGCATCTTCTGCTCGTT 3056
Query 3923 ACTCATCTTCAACTACAGTGGGATGCTTATGGTTGCTTTGACGCCAAACATTCACATGGC 3982
||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||
Sbjct 3057 GCTCATCTTCAACTACTGCGGGATGCTTATGGTTGCTTTGACGCCAAACGTTCACATGGC 3116
Query 3983 AGTGACTCTACGCTCATCTTTTTTCTCCATGTTAAATCTGTTTGCTGGCTTTGTCATTCC 4042
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3117 AGTGACTCTACGCTCGTCTTTTTTCTCCATGTTAAATCTGTTTGCTGGCTTTGTCATTCC 3176
Query 4043 AAAACAGAAAATCCCAAAATGGTGGATATGGATGTACTACCTGAGCCCGACATCATGGGT 4102
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3177 AAAGCAGAAAATCCCAAAATGGTGGATATGGATGTACTACCTGAGCCCGACATCATGGGT 3236
Query 4103 GTTGGAAGGATTACTGAGTTCGCAATATGGAGATGTCGACAAAGAGATATTAGTATTTGG 4162
||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3237 GTTGGAAGGATTATTGAGTTCGCAATATGGAGATGTCGACAAAGAGATAACAGTATTTGG 3296
Query 4163 AGAGAAGAAGAGAGTTTCAGCTTTCTTGGAGGATTACTTTGGTTACAAACATGAATCATT 4222
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 3297 AGAGAAGAAGAGAGTTTCAGCTTTCTTGGAAGATTACTTTGGTTACAAACATGACTCATT 3356
Query 4223 GGCTGTTGTGGCGTTTGTTCTCATCGCTTATCCCATTATCGTGGCAACTCTTTTTGCCTT 4282
|| | | || ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3357 GGTTATAGTAGCGTTTGTTCTCATCGCTTATCCCATTATCGTGGCAACTCTATTTGCCTT 3416
Query 4283 CTTCATGAGC-AAACTCAGTTTCCAAAAGAAATAG 4316
|||||||| | ||||| | ||||||||||||||||
Sbjct 3417 CTTCATGA-CTAAACTGAATTTCCAAAAGAAATAG 3450
Score = 985 bits (533), Expect = 0.0
Identities = 592/621 (95%), Gaps = 2/621 (0%)
Strand=Plus/Plus
Query 933 ATGAAGGCAACATCTGTTGAAGGTTTGAAAAACAATTTGCAAACTGACTATATCCTAAAG 992
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAGGCAATATCTGTTGAAGGTTTGAAAAACAATTTGCAAACTGACTATATCCTAAAG 60
Query 993 ATCCTGGGACTCGATATCTGTGCAGATACAAGAGTTGGAGATGCCACGAGACCTGGAATA 1052
||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 61 ATCCTAGGACTCGATATCTGTGCAGATACACGAGTTGGAGATGCCACGAGACCTGGAATA 120
Query 1053 TCTGGTGGCGAGAAGAGGAGGTTGACAACAGGGGAACTCGTTGTGGGTCCAGCTACCACC 1112
||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 121 TCTGGTGGCCAAAAGAGGAGGTTGACAACAGGGGAACTCGTTGTGGGTCCAGCTACTACC 180
Query 1113 CTCTTTATGGATGAAATATCCAATGGTTTAGACAGCTCAACTACGTTCCAAATAGTGTCA 1172
| || |||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 181 TTGTTCATGGATGAAATATCGAATGGTTTAGACAGCTCAACTACGTTCCAGATAGTGTCA 240
Query 1173 TGTCTCCAACAGTTGGCACATATAGCTGAAGCCACCATACTGATTTCACTTCTTCAGCCT 1232
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 TGTCTCCAACAGATGGCACATATAGCTGAAGCCACCATACTGATTTCACTTCTTCAGCCT 300
Query 1233 GCACCAGAAACGTTTGAGCTTTTTGACGATGTGATTCTTATGGGGGAAGGAAAGATAATT 1292
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 301 GCGCCAGAAACGTTTGAGCTTTTCGACGATGTGATTCTTATGGGGGAAGGAAAGATAATT 360
Query 1293 TACCATGCTCCACGCGCTGATATCTGCAGATTCTTTGAAGAGTTTGGATTTAAGTGTCCA 1352
|||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 361 TACCATGCTCCACGAGCTGATATCTGCAGATTCTTTGAAGACTGTGGATTTAAGTGTCCA 420
Query 1353 GAGAGAAAAGGCGTTGCTGACTTTCTCCAAGAGATTATGTCGA-AAAAGGACCAAGAACA 1411
||||| ||||||||||||||||| ||||||||| ||||||| | |||| || ||||||||
Sbjct 421 GAGAGGAAAGGCGTTGCTGACTTCCTCCAAGAGGTTATGTCTAGAAAA-GATCAAGAACA 479
Query 1412 ATATTGGTGCCACAGAGACAAGCCCTACAGTTATATATCTGTTGATTCCTTCATTAATAA 1471
|||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||
Sbjct 480 ATATTGGTGCCACAAAGGCAAGCCCTACAGTTATATATCTGTTGATTCATTCATTAATAA 539
Query 1472 GTTTAAAGAATCAAATCTTGGGTTGCTGCTAAAGGAAGAACTGTCAAAGCCGTTTAATAA 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 540 GTTTAAAGAATCAAATCTTGGGTTGCTGCTAAAGGAAGAACTGTCAAAGCCGTTTGATAA 599
Query 1532 GTCCCAGACTCGCAAGGATGG 1552
||||||||||||||||||||
Sbjct 600 ATCCCAGACTCGCAAGGATGG 620
Score = 950 bits (514), Expect = 0.0
Identities = 580/611 (95%), Gaps = 8/611 (1%)
Strand=Plus/Plus
Query 2788 AGTTTGATATTCATTCTCCTAATATAACTGTGGAAGAGTCTTTGAAATATTCTGCATGGC 2847
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2150 AGTTTGATATTCATTCTCTTAATATAACTGTGGAAGAGTCTTTGAAATATTCTGCATGGC 2209
Query 2848 TTCGACTCCCCTATAACATAGATTCAAAGACAAAGAACGAACTCGTCAAAGAAGTCCTCG 2907
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2210 TTCGACTCCCCTATAACATTGATTCAAAGACAAAGAACGAACTCGTCAAAGAAGTCCTCG 2269
Query 2908 AGACAGTTGAGCTTGATG-ACATCAAAGATTCCGTGGTGGGACTTCCGGGAATAAGTGGT 2966
|||||||||||||||| | | |||||||||||| ||||||||||||| ||||||||||||
Sbjct 2270 AGACAGTTGAGCTTGA-GAATATCAAAGATTCCATGGTGGGACTTCCTGGAATAAGTGGT 2328
Query 2967 TTATCTA-TAGAACAACGCAAAAGGCTGACTATAGCCGTGGAGCTTGTTGCTAACCCTTC 3025
||||||| | |||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct 2329 TTATCTACT-GAACAACGCAGAAGGCTGACTATAGCCGTGGAGCTTGTTTCTAACCCTTC 2387
Query 3026 CATCATATTTATGGATGAACCTACCACAGGGCTGGACGCAAGAGCCGCCGCCATTGTTAT 3085
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2388 CATCATATTTATGGATGAACCTACCACAGGGCTGGACGCAAGAGCCGCAGCCATTGTTAT 2447
Query 3086 GAGAGCTGTCAAAAATGTTGCTGAGACTGGGAGAACGGTTGTTTGCACGATCCACCAGCC 3145
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2448 GAGAGCTGTGAAAAATGTTGCTGAGACTGGGAGAACGGTTGTTTGCACGATCCACCAGCC 2507
Query 3146 GAGCATAGATATCTTTGAGACATTTGATGAGCTGATCCTAATGAAAAATGGGGGACAGCT 3205
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct 2508 GAGCATAGATATCTTTGAGACATTTGATGAGCTGATCCTGATGAAAAATGGGGGACAGTT 2567
Query 3206 TGTCTACTATGGTCCTCCTGGACAGA-ATTCAAGTAAGGTTATCGAATACTTCGAGAGCT 3264
|||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||| |
Sbjct 2568 TGTCTACTATGGTCCTCCTGGACA-ACATTCAAGTAAGGTTATCGAGTACTTCGAGAG-T 2625
Query 3265 -TCTCTGGACTTCCCAAGATCCAAAAGAATTGTAATCCAGCCACTTGGATCTTAGATATT 3323
|| ||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 2626 ATCCCTGGAGTTCCCAAGATCCAAAAGAATTGTAATCCAGCCACTTGGATGTTAGAGATT 2685
Query 3324 ACTAGTAAATCTGCAGAGGAAAAACTTGGAATAGATTTTTCACAATCATACAAGGATTCA 3383
||| ||||||||||| |||| ||||||||||| |||||| |||||| ||||||||||||
Sbjct 2686 ACTTGTAAATCTGCACAGGATAAACTTGGAATTGATTTTGCACAATTGTACAAGGATTCA 2745
Query 3384 ACTCTGTATAA 3394
|||||||||||
Sbjct 2746 ACTCTGTATAA 2756
> Ahg355259 jgi|Araly1|355259|fgenesh1_pg.C_scaffold_7002432
Length=4173
Score = 1404 bits (760), Expect = 0.0
Identities = 1769/2245 (79%), Gaps = 113/2245 (5%)
Strand=Plus/Plus
Query 161 AGTTGAGTTTGCTTCT-GGAA-A-TGGTG---TTGATGATGAGGAAGAGCTTCGGT-TGC 213
|||||||||||||||| |||| | | || ||| ||||| || |||||||||| | |
Sbjct 24 AGTTGAGTTTGCTTCTAGGAACACTATTGAAAATGACGATGATGATGAGCTTCGGTCT-C 82
Query 214 AGTGGGCAAC-AGTTGAGAGATTACCAACTTTTAAAAGGGTTACTACTGCTTTGTT-GGC 271
| |||| | | ||||||||| |||||| ||| |||| | ||||||||| |||| ||
Sbjct 83 AATGGGTTGCTA-TTGAGAGATCACCAACATTTGAAAGAATCACTACTGCTCTGTTCTGC 141
Query 272 --AAGAGATG---AAGTGTCAGGGAA---AG-GGCGAGTCATTGATGTTACTAGACTTGA 322
|||||||| ||| | || ||| || | |||||||| |||||| ||| ||||||
Sbjct 142 AAAAGAGATGAAAAAG-GGAAGAGAAGCGAGAGACGAGTCATGGATGTTTCTAAACTTGA 200
Query 323 GGGTGC-TGAGAGACGCTTGTTGATTGA-AATGCTCGTTAAACAAATCGAGGATGATAAT 380
|| | | ||| |||||| |||| ||||| | |||| | | ||| | ||| ||||||||
Sbjct 201 GGAT-CTTGATAGACGCCTGTTTATTGATGA-GCTCATCAGACATGTTGAGAATGATAAT 258
Query 381 CTCCGT-TTACT-CAGAAAAATAAGGAAGAGAATTGACAAAGTTGGTATAGAGTTGCCAA 438
| ||| ||| | || ||| ||||||||||||||||| | ||||| || || || ||||
Sbjct 259 C-GCGTCTTATTGCA-AAAGATAAGGAAGAGAATTGATGAGGTTGGGATCGATTTACCAA 316
Query 439 CGGTGGAAGTGAGGTTCAATAACCTTTCTGTTGAGGCGGAATGCCAAGTAATTCATGGAA 498
|| | ||||||||||||| | | |||| ||| || || || || | || || ||||||
Sbjct 317 CGATTGAAGTGAGGTTCAGTGATCTTTTTGTCGAAGCAGAGTGTGAGGTTGTTTATGGAA 376
Query 499 AGCCTATCCCAACTCTTTGGAATACTA-T-CAAGGGCTTACTATCTGAG-TTCATTTGTT 555
||||||||||||||||||||||| ||| | ||| || ||||||| || |||| |||
Sbjct 377 AGCCTATCCCAACTCTTTGGAATGCTATTGCAA--GCAAACTATCT-AGACTCATGCGTT 433
Query 556 CTAAGAAAGAAACCAAGA-TAGGCATCTTGAAAGGAGTGAGTGGAATCGTAAGGCCTGGA 614
| ||| |||||| |||| || ||||||||||||| || ||||| ||| |||||||| |
Sbjct 434 CAAAGCAAGAAAAGAAGATTA-GCATCTTGAAAGGTGTCAGTGGTATCATAAGGCCTAAA 492
Query 615 AGAATGACGTTGTTGCTCGGTCCTCCTGGTTGCGGTAAAACTACTCTGTTACAAGCACTT 674
|||||||| |||||||| |||||||||||||| |||||||| ||||| ||| |||||
Sbjct 493 AGAATGACTTTGTTGCTTGGTCCTCCTGGTTGTGGTAAAACCACTCTACTACTCGCACTA 552
Query 675 TCTGGAA-AATTTTCCGATTCTGTAAAGGTTGGAGGAGAAG-TATGTTACAATGGTTGCT 732
||||||| | | || |||| ||||| | ||||||||| || ||||||| ||| ||
Sbjct 553 TCTGGAAGACTCGACC-CTTCTTTAAAGACTAGAGGAGAAGTTA-GTTACAACGGTCACT 610
Query 733 CACTCTCAGAGTTTATTCCGGAGAAAACGTCGAGTTATATAAGTCAAAACGATCTGCATA 792
| || |||||| |||| |||||||| ||||| |||||||||||||| ||||||||||
Sbjct 611 TGTTTTCGGAGTTTGTTCCTGAGAAAACATCGAGCTATATAAGTCAAAATGATCTGCATA 670
Query 793 TTCCTGAGCTGAGTGTAAGAGAGACACTTGACTTCTCTGCG-TGTTGTCAGGGCATC-GG 850
|||| ||||| ||||| ||||||||||| || || || | | |||| ||| |||| | ||
Sbjct 671 TTCCAGAGCTAAGTGTGAGAGAGACACTCGATTTTTC-GGGATGTTTTCAAGGCA-CGGG 728
Query 851 AAGCCGTATGGAAATTATGAAAGAGATCAGTAGAATGGAAAAACTCCAAGAAATCATTCC 910
||||||| | ||||| ||||||||||| ||||||| ||| ||||| ||| ||| ||||
Sbjct 729 AAGCCGTTTAGAAATGATGAAAGAGATTAGTAGAAGGGAGAAACTGAAAGGAATTGTTCC 788
Query 911 AGATCCTGCTGTAGATGCTTACATGAAGGCAACATCTGTTGAAGGTTTGAAAAAC-AATT 969
|||||||| | ||||||| |||||||||||| | || ||| ||| || |||||| |||
Sbjct 789 AGATCCTGATATAGATGCATACATGAAGGCAGCTTCAATTG-AGGGTTCAAAAACTAATC 847
Query 970 TGCAAACTGACTATATCCTAAAGATCCTGGGACTCGATATCTGTGCAGATACAAGAGTTG 1029
||||||| |||||||||||||| ||||| |||||| ||||||||||||||||| | ||||
Sbjct 848 TGCAAACCGACTATATCCTAAAAATCCTAGGACTCAATATCTGTGCAGATACACGTGTTG 907
Query 1030 GAGATGCCACGAGACCTGGAATATCTGGTGGCGAGAAGAGGAGGTTGACAACAGGGGA-A 1088
||||||| | ||||| |||||||| |||||| | ||||| || || || ||||| || |
Sbjct 908 GAGATGCTTCAAGACCGGGAATATCCGGTGGCCAAAAGAGAAGATTAACTACAGGTGAGA 967
Query 1089 CTCG-TTGTGGGTCCAGCTACCACCCTCT-TT-ATGGATGAAATATCCAATGGTTTAGAC 1145
| | |||| ||||| | | | | || | || |||||||||||||| |||||||| ||
Sbjct 968 -T-GATTGTAGGTCC-GGT-CAAAACTTTGTTCATGGATGAAATATCGAATGGTTTGGAT 1023
Query 1146 AGCTCAACTACGTTCCAAATAGTGTCATGTCTCCAACAGTTGGCACATATAGCTGAAGCC 1205
|| |||||||| || ||||| | ||||||||||||||||| |||| | || ||||||
Sbjct 1024 AGTTCAACTACATTGCAAATTCTATCATGTCTCCAACAGTTTGCACGTCTATCTGAAGGA 1083
Query 1206 ACCATACTGATTTCACTTCTTCAGCCTGCACCAGAAACGTTTGAGCTTTTTGACGATGTG 1265
||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 1084 ACCATACTGGTTTCACTTCTTCAGCCTGCACCAGAAACGTTTGAGCTTTTCGGCGATGTG 1143
Query 1266 ATTCTTATGGGGGAAGGAAAGATAATTTACCATGCTCCACGCGCTGATATCTGCAGATTC 1325
||||||||||| |||||||||||||| || || | |||||| | | ||| || || |||
Sbjct 1144 ATTCTTATGGGAGAAGGAAAGATAATCTATCACGGTCCACGGGATTTTATATGTAGTTTC 1203
Query 1326 TTTGAAGAGTT-TGGATTTAAGTGTCCAGAGAGAAAAGGC-GTTGCTGACTTTCTCCAAG 1383
||||| || || ||||||||| |||||| | || ||| | |||||||| || || ||||
Sbjct 1204 TTTGAGGA-TTGTGGATTTAAATGTCCAAATAGGAAAT-CTGTTGCTGAATTCCTTCAAG 1261
Query 1384 AGATTATGTCGAA--AAAGGACCAAGAACAATATTGGTGCCACAGAGACAAGCCCTACAG 1441
|| |||| || || |||| | |||||||| |||||||| ||||||||||| || || |
Sbjct 1262 AGGTTATCTC-AAGGAAAG-ATCAAGAACAGTATTGGTGTCACAGAGACAAACCATATTG 1319
Query 1442 TTATATATCTGTTGATTCCTTCATTAATAAGTTTAAAGAA-TCAAATCTTGGGTTGCTGC 1500
|||| | ||| |||| || |||||| | || |||||| || || |||||||| | | |
Sbjct 1320 TTATGTCTCTATTGACTCATTCATTGAGAAATTTAAA-AAGTCTGATCTTGGGCTACAAC 1378
Query 1501 TA-AAGGA-AGAACTGTCAAAGCCGTTTAATAAGTCCCAGACTCGCAAGGATGGTTTATG 1558
|| ||| | | |||| || ||| | | | | ||||| ||||||| |||||||| | ||
Sbjct 1379 TACAAG-ACA-AACTCTCCAAGACATATGACAAGTCTCAGACTCAAAAGGATGGACTGTG 1436
Query 1559 -TTATAAAAAATATTCACTGGGTAAGTGGGAGATGCTTAAAGCTTGCTCAAGGAGAGAAT 1617
|| || |||||| ||||| |||| ||||| |||||||||||||| |||||||||||||
Sbjct 1437 CTT-TAGAAAATACTCACTTAGTAACTGGGATATGCTTAAAGCTTGTTCAAGGAGAGAAT 1495
Query 1618 TTCTTTTAATGAAACGGAATTCTTTCATTTACTTGTTCAAATCTGCACTGTTAGTTTTTA 1677
||||| | |||||||| || |||||| ||||| | |||||||||| ||| ||| |||| |
Sbjct 1496 TTCTTCTGATGAAACGTAACTCTTTCGTTTACGTATTCAAATCTGGACTTTTAATTTTCA 1555
Query 1678 ATGCG-TT-AGTCACAATGACCGTTTTTCTACA-AGTTGGTGCGACGACG-GATTCTCTT 1733
|| | || | | ||||||| |||| |||||| | | ||| | || | | |||||||||
Sbjct 1556 TTG-GATTCATTG-CAATGACTGTTTATCTACAGACTGGGT-CTACAA-GAGATTCTCTT 1611
Query 1734 CATGGGAATTATCTGATGGGTTCTCTATTCACTGCTCTCTTTAGACTTCTTGCCGATGGG 1793
|||| |||||||| ||||||||| | ||| | ||||||||| ||||||||| |||||
Sbjct 1612 CATGCTAATTATCTTATGGGTTCTTTGTTCTTTTCTCTCTTTAAACTTCTTGCTGATGGA 1671
Query 1794 CTTCCAGAACTCACTCTT-ACTATCTCCAGACTTGGTGTGTTCTGCAAACAGAAAG-ATT 1851
|||||||||||||| || || ||| | ||| ||| ||||||||||| || |||| | |
Sbjct 1672 CTTCCAGAACTCACA-TTGACAATCGCGAGAATTGCCGTGTTCTGCAAGCA-AAAGGAGT 1729
Query 1852 TGTACTTCTATCCTGCTTGGGCATATGCGATTCCTTCAATTATCTTAAAGATACCTCTAT 1911
| ||||| |||||||||||||||||||| || |||||| ||||||||||||||| | |
Sbjct 1730 TATACTTTTATCCTGCTTGGGCATATGCAATACCTTCAGCTATCTTAAAGATACCAATTT 1789
Query 1912 CGGTTCTCGATTCATTCATCTGGACATTACTGACATATTATGTCATTGGTTACAGCCCCG 1971
| |||| || |||||| | |||||||| ||||||||||||||||||||||||| || |
Sbjct 1790 CATTTCTTGAATCATTCCTATGGACATTGTTGACATATTATGTCATTGGTTACAGTCCAG 1849
Query 1972 AGGTCAAAAGGTTC-TTCCTGC-AGTTCCTT-ATCTTATCTACATT-CAACCTTTCTTGT 2027
|| | |||||| ||| || || || || ||||| | | | || || |||||| |||
Sbjct 1850 AGATGGGCAGGTTCATTC--GCCAGCTC-TTGATCTTCTTTGCTTTACA-CCTTTCATGT 1905
Query 2028 GTATCAATGTTTCGCGCTATTGCGGCAATCTTTCGCACAATTA-TTGCTT-CCACAATCA 2085
|||||||||| || ||||| || || ||||||| | || || ||| |||||| ||
Sbjct 1906 ATATCAATGTTCCGTGCTATAGCTGCTGTCTTTCGGG-ATTTTGTT-CTTGCCACAACCA 1963
Query 2086 CTGGA-GCTATTTCCATATTGGTTCTCTCATTATTTGGTGGCTTCGTTATTCCAAAATCA 2144
|||| || || || ||| || |||||||| |||| ||||| || || ||| |||| |
Sbjct 1964 TTGGAAGC-ATCTCTATAGTGCTTCTCTCAGTATTCGGTGGTTTTATTGTTCGAAAACCC 2022
Query 2145 TCAATGCCTGCTTGGCTGG-GATGGGGATTCTGGCTTTCTCCCTTGTCATATGCCGAGAT 2203
||||||||| ||||||| | | |||||||||||||||||||| ||||||||||| |||||
Sbjct 2023 TCAATGCCTTCTTGGCTTGAG-TGGGGATTCTGGCTTTCTCCATTGTCATATGCTGAGAT 2081
Query 2204 TGGTCTAACCGCAAATGAATTTTTCTCTCCACGATGGAGCAAGGTAATC-TCT-AGCA-A 2260
||||||||||||||||||||||||| ||||||| ||||| ||||||| | ||| | | |
Sbjct 2082 TGGTCTAACCGCAAATGAATTTTTCGCTCCACGGTGGAGGAAGGTAA-CATCTGAAAACA 2140
Query 2261 GA-CTACGGCTGGGGAACAAATGT-TAGATATTCGTGGGTTGAA-TTTCGGTAGGCACTC 2317
|| || || ||| ||||| | | ||||| ||| |||||||| ||| || | || ||
Sbjct 2141 GAACTTTGG--GGG-AACAAGT-TCTAGATGCTCGCGGGTTGAACTTT-GGAAATCAATC 2195
Query 2318 TTACTGGACA-GCTTTTGGTGCTTT 2341
|||||||| | || ||||| |||||
Sbjct 2196 TTACTGGA-ATGCATTTGGCGCTTT 2219
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 163228930597
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5