BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G15236.1
Length=4167
Score E
Sequences producing significant alignments: (Bits) Value
Ahg355259 jgi|Araly1|355259|fgenesh1_pg.C_scaffold_7002432 6573 0.0
Ahg329987 jgi|Araly1|329987|fgenesh1_pm.C_scaffold_7002214 2676 0.0
Ahg890779 jgi|Araly1|890779|Al_scaffold_0007_2765 510 3e-143
> Ahg355259 jgi|Araly1|355259|fgenesh1_pg.C_scaffold_7002432
Length=4173
Score = 6573 bits (3559), Expect = 0.0
Identities = 3966/4168 (95%), Gaps = 6/4168 (0%)
Strand=Plus/Plus
Query 1 ATGCCTCAAACAGATGGAGTTGAGTTTGCTTCTAGGAACAATCTTGAAAATGGGGATGGT 60
||| |||||||||||||||||||||||||||||||||||| | ||||||||| |||| |
Sbjct 7 ATGTCTCAAACAGATGGAGTTGAGTTTGCTTCTAGGAACACTATTGAAAATGACGATGAT 66
Query 61 GATCAGGTTCGGTCTCAATGGGTTGCTATTGAGAGATCACCAACATGTAAAAGAATCACT 120
||| || ||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 67 GATGAGCTTCGGTCTCAATGGGTTGCTATTGAGAGATCACCAACATTTGAAAGAATCACT 126
Query 121 ACTGCTTTGTTCTGCAAAAGAGATGAACAAGGGAAGAGAAGCCAGAGACGAGTCATGGAT 180
|||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 127 ACTGCTCTGTTCTGCAAAAGAGATGAAAAAGGGAAGAGAAGCGAGAGACGAGTCATGGAT 186
Query 181 GTTTCTAAACTTGAGGATCTTGATAGACGCCTGTTTATTGATGAGCTCATCAGACATGTT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 187 GTTTCTAAACTTGAGGATCTTGATAGACGCCTGTTTATTGATGAGCTCATCAGACATGTT 246
Query 241 GAGGATGATAATCGCGTCTTATTGCAAAAGATTAGGACA-AGAACTGACGAGGTTGGAAT 299
||| |||||||||||||||||||||||||||| |||| | |||| ||| |||||||| ||
Sbjct 247 GAGAATGATAATCGCGTCTTATTGCAAAAGATAAGGA-AGAGAATTGATGAGGTTGGGAT 305
Query 300 TGATTTACCAAAGATTGAAGTGAGGTTCAGTGATCTTTTTGTCGAAGCAGAGTGTGAGGT 359
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 306 CGATTTACCAACGATTGAAGTGAGGTTCAGTGATCTTTTTGTCGAAGCAGAGTGTGAGGT 365
Query 360 TGTTCATGGAAAGCCTATCCCAACTCTTTGGAATGCTATTGCAAGCAAACTATCAAGATT 419
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct 366 TGTTTATGGAAAGCCTATCCCAACTCTTTGGAATGCTATTGCAAGCAAACTATCTAGACT 425
Query 420 CACGTTTTCAAAACAAGAAGATAAGATAAGTATCTTGAAAGGTGTCAGTGGCATCATAAG 479
|| | |||||| |||||| | ||||| || |||||||||||||||||||| ||||||||
Sbjct 426 CATGCGTTCAAAGCAAGAAAAGAAGATTAGCATCTTGAAAGGTGTCAGTGGTATCATAAG 485
Query 480 GCCTAAAAGAATGACTTTGTTGCTTGGTCCTCCTGGTTGTGGTAAAACCACTCTACTACT 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 486 GCCTAAAAGAATGACTTTGTTGCTTGGTCCTCCTGGTTGTGGTAAAACCACTCTACTACT 545
Query 540 CGCACTATCTGGAAGACTAGACCCTTCTTTAAAGACTAGAGGAGAAGTTAGTTACAATGG 599
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 546 CGCACTATCTGGAAGACTCGACCCTTCTTTAAAGACTAGAGGAGAAGTTAGTTACAACGG 605
Query 600 TCACTTATTTTCGGAGTTTGTTCCTGAGAAAACATCGAGCTATGTAAGTCAAAATGATTT 659
|||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 606 TCACTTGTTTTCGGAGTTTGTTCCTGAGAAAACATCGAGCTATATAAGTCAAAATGATCT 665
Query 660 GCATATTCCAGAGCTTAGTGTGAGAGAGACACTCGATTTTTCTGGATGTTTTCAAGGCGC 719
||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 666 GCATATTCCAGAGCTAAGTGTGAGAGAGACACTCGATTTTTCGGGATGTTTTCAAGGCAC 725
Query 720 GGGAAGCCGTTTAGAAATGATGAAAGAGATTAGTAGAAGGGAGAAACTGAAAGGAATAGT 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 726 GGGAAGCCGTTTAGAAATGATGAAAGAGATTAGTAGAAGGGAGAAACTGAAAGGAATTGT 785
Query 780 TCCAGATCCTGATATTGATGCATACATGAAGGCAGCTTCTATTGAGGGTTCAAAAACAAA 839
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 786 TCCAGATCCTGATATAGATGCATACATGAAGGCAGCTTCAATTGAGGGTTCAAAAACTAA 845
Query 840 TCTGCAAACCGACTATATCTTAAAAATCCTAGGACTCACTATCTGTGCAGATACACGTGT 899
||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct 846 TCTGCAAACCGACTATATCCTAAAAATCCTAGGACTCAATATCTGTGCAGATACACGTGT 905
Query 900 TGGAGATGCTTCGAGACCAGGAATATCTGGTGGCCAAAAGAGAAGATTAACTACAGGTGA 959
|||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 906 TGGAGATGCTTCAAGACCGGGAATATCCGGTGGCCAAAAGAGAAGATTAACTACAGGTGA 965
Query 960 GATGATTGTAGGTCCAATCAAAACTCTGTTCATGGATGAAATATCGAATGGTTTGGATAG 1019
||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 966 GATGATTGTAGGTCCGGTCAAAACTTTGTTCATGGATGAAATATCGAATGGTTTGGATAG 1025
Query 1020 TTCAACTACATTCCAGATTCTATCATGTCTCCAACAGTTTGCACGTCTATCTGAAGGAAC 1079
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1026 TTCAACTACATTGCAAATTCTATCATGTCTCCAACAGTTTGCACGTCTATCTGAAGGAAC 1085
Query 1080 CATATTGGTTTCACTGCTTCAGCCTGCACCAGAAACGTTTGAGCTTTTCGACGATTTGAT 1139
|||| |||||||||| |||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 1086 CATACTGGTTTCACTTCTTCAGCCTGCACCAGAAACGTTTGAGCTTTTCGGCGATGTGAT 1145
Query 1140 TCTTATGGGAGAAGGAAAGATAATCTATCACGGTCCACGGGATTTTATATGTAGTTTCTT 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1146 TCTTATGGGAGAAGGAAAGATAATCTATCACGGTCCACGGGATTTTATATGTAGTTTCTT 1205
Query 1200 TGAGGATTGTGGATTTAAATGTCCACAGAGGAAATCTGTTGCTGAATTCCTTCAGGAGGT 1259
||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||
Sbjct 1206 TGAGGATTGTGGATTTAAATGTCCAAATAGGAAATCTGTTGCTGAATTCCTTCAAGAGGT 1265
Query 1260 TATCTCAAGGAAAGATCAAGAACAATATTGGTGTCACAGAGACAAACCATATTGCTATGT 1319
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 1266 TATCTCAAGGAAAGATCAAGAACAGTATTGGTGTCACAGAGACAAACCATATTGTTATGT 1325
Query 1320 CTCTATTGATTCATTTATTGAGAAATTTAAAAAGTCTGATCTTGGGCTACAACTACAAGA 1379
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1326 CTCTATTGACTCATTCATTGAGAAATTTAAAAAGTCTGATCTTGGGCTACAACTACAAGA 1385
Query 1380 CGAACTCTCCAAGACATATGACAAGTCTCAGACTCAAAAGGATGGACTGTGCATTAGAAA 1439
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1386 CAAACTCTCCAAGACATATGACAAGTCTCAGACTCAAAAGGATGGACTGTGCTTTAGAAA 1445
Query 1440 ATACTCACTTAGTAACTGGGATATGTTTAAAGCTTGCTCAAGGAGAGAATTTCTTCTGAT 1499
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 1446 ATACTCACTTAGTAACTGGGATATGCTTAAAGCTTGTTCAAGGAGAGAATTTCTTCTGAT 1505
Query 1500 GAAACGTAACTCTTTCGTTTACGTATTCAAATCTGGACTTTTAATATTCATTGGATCCAT 1559
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct 1506 GAAACGTAACTCTTTCGTTTACGTATTCAAATCTGGACTTTTAATTTTCATTGGATTCAT 1565
Query 1560 TGCAATGACTGTTTATCTACGGACTGGGTCTACAAGAGATTCTCTTCATGCTAATTATCT 1619
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1566 TGCAATGACTGTTTATCTACAGACTGGGTCTACAAGAGATTCTCTTCATGCTAATTATCT 1625
Query 1620 TTTGGGTTCTTTGTTCTTTTCCCTCATTAAACTTCTTGCTGATGGACTACCAGAACTCAC 1679
| ||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||
Sbjct 1626 TATGGGTTCTTTGTTCTTTTCTCTCTTTAAACTTCTTGCTGATGGACTTCCAGAACTCAC 1685
Query 1680 ATTGACAGTCTCGAGAATTGCGGTGTTCTGCAAACAAAAAGAGTTATACTTTTATCCTGC 1739
||||||| || |||||||||| ||||||||||| ||||| ||||||||||||||||||||
Sbjct 1686 ATTGACAATCGCGAGAATTGCCGTGTTCTGCAAGCAAAAGGAGTTATACTTTTATCCTGC 1745
Query 1740 TTGGGCATATGCTATTCCTTCTGCTATTTTAAAGATACCGATTTCATTTCTTGAATCATT 1799
|||||||||||| || ||||| ||||| ||||||||||| ||||||||||||||||||||
Sbjct 1746 TTGGGCATATGCAATACCTTCAGCTATCTTAAAGATACCAATTTCATTTCTTGAATCATT 1805
Query 1800 CCTCTGGACAATGTTGACATATTATGTCATTGGTTACAGTCCTGAGGCGGGAAGGTTCAT 1859
||| |||||| ||||||||||||||||||||||||||||||| ||| ||| ||||||||
Sbjct 1806 CCTATGGACATTGTTGACATATTATGTCATTGGTTACAGTCCAGAGATGGGCAGGTTCAT 1865
Query 1860 TCGCCAGGTCTTGATCTTATTTGCTCTACACCTTTCGTGTATATCGATGTTCCGTGCTAT 1919
||||||| |||||||||| |||||| |||||||||| |||||||| ||||||||||||||
Sbjct 1866 TCGCCAGCTCTTGATCTTCTTTGCTTTACACCTTTCATGTATATCAATGTTCCGTGCTAT 1925
Query 1920 AGGTGCTGTCTTTCGAGATTTTGATGTTGCCACTACCATTGGAAGCATCTCTATAGTGCT 1979
|| |||||||||||| ||||||| | ||||||| ||||||||||||||||||||||||||
Sbjct 1926 AGCTGCTGTCTTTCGGGATTTTGTTCTTGCCACAACCATTGGAAGCATCTCTATAGTGCT 1985
Query 1980 TCTCTCAGTATTCGGAGGTTTCATTGTTCGAAAACCCTCAATGCCTTCTTGGCTTGAGTG 2039
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1986 TCTCTCAGTATTCGGTGGTTTTATTGTTCGAAAACCCTCAATGCCTTCTTGGCTTGAGTG 2045
Query 2040 GGGATTCTGGCTTTCTCCACTGTCATATGCTGAGATTGGTCTAACCTCAAATGAATTTTT 2099
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 2046 GGGATTCTGGCTTTCTCCATTGTCATATGCTGAGATTGGTCTAACCGCAAATGAATTTTT 2105
Query 2100 CGCTCCAATGTGGAGGAAGATGACATCTGAAAACAGAACTTTGGGGGAACAAGTTCTAGA 2159
||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 2106 CGCTCCACGGTGGAGGAAGGTAACATCTGAAAACAGAACTTTGGGGGAACAAGTTCTAGA 2165
Query 2160 TGCTCGCGGGTTGAATTTTGGAAATCAATCTTACTGGAATGCATTTGGCGCATTGATTGG 2219
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2166 TGCTCGCGGGTTGAACTTTGGAAATCAATCTTACTGGAATGCATTTGGCGCTTTGATTGG 2225
Query 2220 CTTCACACTCTTCTTCAATACTGTTTTTGCACTGGCCTTGACCTTTT-TGAAGACTTCAC 2278
|||| |||||||||||||||||||||||||||||||||||| ||||| | ||||||||||
Sbjct 2226 CTTCTCACTCTTCTTCAATACTGTTTTTGCACTGGCCTTGA-CTTTTCTAAAGACTTCAC 2284
Query 2279 AGAGGTCTCGTGTAATTGTTTCTCATGACAAGAACACTCAAAGCTCAGAGAAAGATTCTA 2338
||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 2285 AGAGGTCTCGTGTGATTGTTTCTCATGAAAAGAACACTCAAAGCTCAGAAAAAGATTCTG 2344
Query 2339 AAATTGCTTCCC-ATTCCAAAAATGCATTGCCTTTCGAACCTCTAACTTTCACATTTCAA 2397
|||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2345 AAATTGCTTCCCAATT-CAAAAATGCATTACCTTTCGAACCTCTAACTTTCACATTTCAA 2403
Query 2398 GACGTACAATATTTTATTGAGACTCCTCAGGGAAAGAAGCTGCAGCTTCTCTCTGACGTT 2457
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2404 GACATACAATATTTTATTGAGACTCCTCAGGGAAAGAAGCTGCAGCTTCTCTCTGACGTT 2463
Query 2458 ACAGGTGCATTCAAGCCCGGTGTTCTCACTGCTCTAATGGGTGTGAGTGGCGCTGGTAAA 2517
||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 2464 ACAGGCGCATTCAAGCCCGGTGTTCTCACCGCTCTAATGGGTGTGAGTGGAGCTGGTAAA 2523
Query 2518 ACGACTCTGCTTGACGTTCTCTCAGGAAGGAAAACCCGCGGTGACATTAAAGGACAGATT 2577
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2524 ACGACTCTGCTTGATGTTCTTTCAGGAAGGAAAACCCGCGGTGACATTAAAGGACAGATT 2583
Query 2578 GAAGTAGGCGGTTACGTTAAGGTTCAAGACACATTTTCGCGGGTTTCAGGTTATTGTGAA 2637
||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||
Sbjct 2584 GAAGTAGGCGGTTACCTTAAGGTTCAAGACACATTTTCGCGGGTTTCAGGTTACTGCGAA 2643
Query 2638 CAGTTTGATATCCATTCTCCCAACTTAACAGTCCAAGAGTCCCTGAAATACTCTGCTTGG 2697
||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||
Sbjct 2644 CAGTTTGATATCCATTCTCCCAATTTAACTGTCCAAGAGTCCCTGGAATACTCTGCTTGG 2703
Query 2698 CTTCGACTTCCTTGTAACATTAGTTCAGAAACTAAGAGTGCAATAGTTAATGAAGTTCTT 2757
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2704 CTTCGACTTCCTTCTAACATCAGTTCAGAAACTAAGAGTGCAATAGTTAATGAAGTTCTT 2763
Query 2758 GAGACGATAGAGCTTGAGGAGATTAAAGATTCCTTAGTAGGAGTTCCTGGAATTAGCGGT 2817
|||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 2764 GAGACGATAGAGCTCAAGGAGATTAAAGATTCCATAGTAGGAATTCCTGGAATTAGCGGT 2823
Query 2818 GTAACAGCAGAACAACGCAAAAGACTAACAATAGCTGTGGAGCTTGTTTCCAATCCTTCA 2877
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2824 TTAACAACAGAACAACGCAAAAGACTAACAATAGCTGTGGAGCTTGTTTCCAATCCATCA 2883
Query 2878 ATAATATTTATGGATGAACCAACCACAGGATTAGATGCAAGAGCTGCAGCAATTGTAATG 2937
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2884 ATCATATTTATGGATGAACCAACCACAGGATTAGATGCAAGAGCTGCTGCAATTGTAATG 2943
Query 2938 AGAGCTGTGAAGAACATCGCCGAGACTGGCAGAACTGTTGTTTGCACAATTCACCAGCCG 2997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2944 AGAGCTGTGAAGAACATCGCCGAGACTGGCAGAACTGTTGTTTGCACAATTCACCAGCCG 3003
Query 2998 AGCATAGATATCTTTGAGGCATTTGATGAGCTGATTCTGATGAAAAATGGAGGAAAGATT 3057
|||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct 3004 AGCATAGATATCTTCGAGACATTTGACGAGCTGATTCTGATGAAAAATGGAGGAAAGATT 3063
Query 3058 ATCTATTACGGACCTCTTGGACAACATTCAAGCAAAGTTATTGAATACTTTATGAGCATT 3117
|||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 3064 ATCTATTATGGACCTCTTGGACAACATTCAAACAAAGTTATTGAATACTTTATGAGCATT 3123
Query 3118 CCTGGAGTTCCAAAACTGAAAGAAAACTCTAACCCAGCCACTTGGATACTTGACATTACT 3177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3124 CCTGGAGTTCCAAAACTGAAAGAAAACTCTAACCCAGCCACTTGGATACTTGACATTACT 3183
Query 3178 TCTAAATCATCAGAAGACAAACTTGGTGTTGATTTGGCACATATATACGAGGAATCGACT 3237
||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |
Sbjct 3184 TCTAAATCATCAGAAGACAAACTTGGTGTTGATTTGGCACAAATATACAAGGAATCGAAT 3243
Query 3238 TTGTTTAAGGAGAACAAAATGGTAATTGAGCAAACGAGATGTACATCTTTGGGATCAGAA 3297
||||||||||||||||| || ||||||||| |||| ||||||||||||||||||||| ||
Sbjct 3244 TTGTTTAAGGAGAACAACATTGTAATTGAGGAAACAAGATGTACATCTTTGGGATCAAAA 3303
Query 3298 AGATTAATCTTGTCATCACGTTATGCTCAAACGAGTTGGGAACAATTCAAAGCATGCCTC 3357
|||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||
Sbjct 3304 AGATTAATCTTGTCTTCGCGTTATGCTCAAACGGGTTGGGAACAATTCAAAGCATGCCTC 3363
Query 3358 TGGAAACAACATCTCTCTTATTGGAGAAACCCTTCCTACAATCTCACTCGCATCATTTTC 3417
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 3364 TGGAAACAACATCTCTCTTATTGGAGAAACCCTTCCTACAACCTCACTCGCATCATTTTC 3423
Query 3418 ATGTGTTTTACTTGTATGCTCTGTGGCATTCTTTTCTTGCAAAAAGCTAAGGAAATAAAC 3477
||||||||||||| |||||| ||||| |||||||||| ||||||||||||||||||||||
Sbjct 3424 ATGTGTTTTACTTCTATGCTGTGTGGTATTCTTTTCTGGCAAAAAGCTAAGGAAATAAAC 3483
Query 3478 AATCAGCAAGATCTATTCAACGTCTTTGGCTCAATGTTTACGGTGGTTCTATTCTCTGGA 3537
|||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 3484 AATCAGCAAGATATATTCAACGTGTTTGGCTCAATGTTCACGGTGGTTCTATTCTCTGGA 3543
Query 3538 ATAAACAATTGCTCAACAGTGATATTTTGCGTTGCAACCGAACGAAATGTCTTCTACCGC 3597
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3544 ATAAACAATTGCTCAACAGTGTTATTTTGCGTTGCAACCGAACGAAATGTCTTCTACCGC 3603
Query 3598 GAAAGATTTTCCCGTATGTACAACCCATGGGCGTATTCCCTTGCTCAGGTGTTGGTTGAA 3657
|||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct 3604 GAAAGATTTTCCCGTATGTACAACTCATGGGCGTATTCTCTTGCTCAGGTGTTGGTTGAA 3663
Query 3658 ATTCCATACTCATTGTTCCAATCTATTATATATGTGATAATCGTATATCCTATGGTTGGC 3717
||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct 3664 ATTCCATACTCATTGTTCCAATCTATTGTATACGTGATAATCGTATATCCTATGGTTGGT 3723
Query 3718 TATCACTGGTCGGTCTACAAAGTGTTTTGGAGCTTCTACTCAATTTTCTGCTCCTTGCTT 3777
|||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct 3724 TATCACTGGTCGATCTTCAAAGTGTTTTGGAGCTTCTACTCAATATTCTGCTCCTTGCTC 3783
Query 3778 ATCTTCAACTATTTCGGCATGCTTTTAGTTGTGGTGACCCCAAACGTTCACATTGCTTTT 3837
||||||||||||||||||||||||||||| || || ||||||||||||||| ||||||||
Sbjct 3784 ATCTTCAACTATTTCGGCATGCTTTTAGTCGTTGTAACCCCAAACGTTCACGTTGCTTTT 3843
Query 3838 ACTCTCCGCTCTTCATTTTACGCAATCGTCAATCTCTTTGCTGGTTATGTCATGCCAAAA 3897
|||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 3844 ACTCTCCGCTCTTCGTTTTACTCAATAGTCAATCTCTTTGCTGGTTATGTCATGCCAAAA 3903
Query 3898 CCTAACATTCCGAGATGGTGGATTTGGATGTATTACTTGAGCCCGACGTCATGGGTTTTG 3957
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 3904 CCTAACATTCCGAGATGGTGGATTTGGATGTATTACTTGAGCCCAACATCATGGGTTTTG 3963
Query 3958 AACGGATTGCTCACATCGCAGTATGGAGATATGGAGAAAGAGATATTAGCGTTTGGAGAG 4017
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 3964 AACGGATTGCTCACGTCGCAGTATGGAGATATGGAGAAAGAGATTTTAGCGTTTGGAGAG 4023
Query 4018 AAGAAGAAAGTTTCAGCTTTCTTGGAAGATTATTTTGGCTACAGATATGACTCTCTGGCT 4077
|||||||||||||||| ||||||||||||||||||||| ||||||||||| ||| |||||
Sbjct 4024 AAGAAGAAAGTTTCAGATTTCTTGGAAGATTATTTTGGTTACAGATATGATTCTTTGGCT 4083
Query 4078 CTTGTAGCTGTTGTTCTTATTGCCTTCCCCATTCTCTTGGCATCTCTTTTTGCCTTCTTC 4137
|||||||||||||||||||||||||||||| |||||||||||||||| || || || |||
Sbjct 4084 CTTGTAGCTGTTGTTCTTATTGCCTTCCCCGTTCTCTTGGCATCTCTATTCGCATTTTTC 4143
Query 4138 ATTGGTAAACTCAATTTCCAAAAGAAGT 4165
||||||||||||||||||||||||||||
Sbjct 4144 ATTGGTAAACTCAATTTCCAAAAGAAGT 4171
> Ahg329987 jgi|Araly1|329987|fgenesh1_pm.C_scaffold_7002214
Length=4158
Score = 2676 bits (1449), Expect = 0.0
Identities = 3255/4104 (79%), Gaps = 215/4104 (5%)
Strand=Plus/Plus
Query 178 GATGTTTCTAAACTTGAGGAT-CTTGATAGACGCCTGTTTATTGATG-AGCTCATCAGAC 235
|||||| |||||||||||| | | ||| |||||| |||| ||||| | ||||| ||| ||
Sbjct 148 GATGTTACTAAACTTGAGGGTGC-TGAGAGACGCTTGTTAATTGA-GAAGCTCGTCAAAC 205
Query 236 ATGTTGAGGATGATAATC-GCGTCTTATTGCA-AAAGATTAGGACA-AGAACT-GACGAG 291
| | |||| |||||| | ||| ||| | || ||| || |||| | |||| | |||||
Sbjct 206 AAATCGAGGTTGATAACCTTCGT-TTACT-CAGAAATATAAGGA-AGAGAA-TCGACGAA 261
Query 292 GTTGGAATTGATTTACCAAAGATTGAAGTGAGGTTCAGTGATCTTTTTGTCGAAGCAGAG 351
||||| || || ||||||| | | ||||||||||||| ||| || | ||| ||||| ||
Sbjct 262 GTTGGTATAGAGTTACCAACGGTGGAAGTGAGGTTCAATGACCTCTCTGTTGAAGCGGAA 321
Query 352 TGTGAGGTTGTTCATGGAAAGCCTATCCCAACTCTTTGGAATGCTATTGCAA--GCAAAC 409
|| || || |||||||||||||||||||||||||||||||| ||| | ||| ||| |
Sbjct 322 TGCGAAGTAATTCATGGAAAGCCTATCCCAACTCTTTGGAATACTA-T-CAAGGGCATAT 379
Query 410 TATCAAGA-TTCACGTT-TTCAAA-ACAAGAAGA-TAAGATAAGTATCTTGAAAGGTGTC 465
|||| || |||| || |||||| | ||||| | |||||||| ||||||||||| ||
Sbjct 380 TATC-TGAGTTCA-TTTGTTCAAAGA-AAGAA-ACCAAGATAAGCATCTTGAAAGGCGTG 435
Query 466 AGTGGCATCATAAGGCCTAAAAGAATGACTTTGTTGCTTGGTCCTCCTGGTTGTGGTAAA 525
||||| ||| |||||||| ||||||||| ||||| ||||||||||||||||||||||||
Sbjct 436 AGTGGAATCGTAAGGCCTGGAAGAATGACGTTGTTACTTGGTCCTCCTGGTTGTGGTAAA 495
Query 526 ACCACTCTACTACTCGCACTATCTGGAAGACTAGACCC-TTCTTTAAAGACTAGAGGAGA 584
|||||||| |||| ||||| ||||||||||| ||| |||| ||||| | |||||||
Sbjct 496 ACCACTCTGCTACAGGCACTTTCTGGAAGACT-TTCCCATTCTGTAAAGGTTGGAGGAGA 554
Query 585 AGTTAGTTACAATGGTCACTTATTTTCGGAGTTTGTTCCTGAGAAAACATCGAGCTATGT 644
||| ||||| || ||| |||| |||| |||||| |||| || ||||| ||||| ||| |
Sbjct 555 AGTAAGTTATAACGGTTGCTTACTTTCAGAGTTTATTCCAGAAAAAACGTCGAGTTATAT 614
Query 645 AAGTCAAAATGATTTGCATATTCCAGAGCTTAGTGTGAGAGAGACACTCGATTTTTCTGG 704
||||||||||||| |||||||||||||||| |||||||||||||| ||||| || ||||
Sbjct 615 AAGTCAAAATGATCTGCATATTCCAGAGCTGAGTGTGAGAGAGACGCTCGACTTCTCTGC 674
Query 705 ATGTTTTCAAGGCGCGGGAAGCCGT-TTAGAAATGATGAAAGAGATTAGTAGAAGGGAGA 763
||||| |||||| ||||||||| || ||||| ||||||||||| |||||||||||||
Sbjct 675 ATGTTGCCAAGGCATAGGAAGCCGTATT-GAAATTATGAAAGAGATCAGTAGAAGGGAGA 733
Query 764 AACTGAAAGGAATAGTTCCAGATCCTGATATTGATGCATACATGAAGGCAGCT-TCTATT 822
|||| |||| ||| ||||||||||||||||| ||||| |||||||||||| | ||| ||
Sbjct 734 AACTCAAAGAAATTGTTCCAGATCCTGATATAGATGCTTACATGAAGGCA-ATATCTGTT 792
Query 823 G-AGGGTTCAAAAACAAATCTGCAAACCGACTATA-TCTTAAAAATCCTAGGACTC-ACT 879
| ||| || |||||| ||| ||||||| ||||||| || |||| ||||| |||||| | |
Sbjct 793 GAAGGTTTGAAAAAC-AATATGCAAACTGACTATATTC-TAAAGATCCTTGGACTCGA-T 849
Query 880 ATCTGTGCAGATACACGTGTTGGAGATGCTTCGAGACCAGGAATATCTGGTGGCCAAAAG 939
||||||||||||||||| | ||||||||| | ||||| |||||||||||||||||||||
Sbjct 850 ATCTGTGCAGATACACGAGCTGGAGATGCCACAAGACCTGGAATATCTGGTGGCCAAAAG 909
Query 940 AGAAGATTAACTACAGGTGAGA-TGATTGTAGGTCCAATC-AAAACTCTGTTCATGGATG 997
|| || || || |||||||| | || |||| ||||| | | | ||||||||||||||||
Sbjct 910 AGGAGGTTGACAACAGGTGAAATTG-TTGTGGGTCC-AGCTACTACTCTGTTCATGGATG 967
Query 998 AAATATCGAATGGTTTGGATAGTTCAACTACATTCCAGATTCTATCATGTCTCCAACAGT 1057
||||||||||||||||||| || |||||||| |||||||| | || |||||||||||||
Sbjct 968 AAATATCGAATGGTTTGGACAGCTCAACTACGTTCCAGATAGTGTCGTGTCTCCAACAGT 1027
Query 1058 TTGCACGTCTATCTGAAGGAACCATATTGGTTTCACTGCTTCAGCCTGCACCAGAAACGT 1117
| || | | || |||||| |||||| || ||||||| |||||||||||||||||||| |
Sbjct 1028 TGGCGCATATAGCTGAAGCCACCATACTGATTTCACTTCTTCAGCCTGCACCAGAAACAT 1087
Query 1118 TTGAGCTTTTCGACGATTTGATTCTTATGGGAGAAGGAAAGATAATCTATCACGGTCCAC 1177
|||||||||| |||||| ||||||||||||| |||||||||||||| || || | |||||
Sbjct 1088 TTGAGCTTTTTGACGATGTGATTCTTATGGGGGAAGGAAAGATAATTTACCATGCTCCAC 1147
Query 1178 GGGATTTTATATGTAGTTTCTTTGA-GGATTGTGGATTTAAATGTCCACAGAGGAAAT-C 1235
| | | ||| | || |||||||| || ||||||||||||||||||| |||| ||| |
Sbjct 1148 GAGCTGATATCGGCAGATTCTTTGAAGG-TTGTGGATTTAAATGTCCAGAGAGAAAAGGC 1206
Query 1236 TGTTGCTGAATTCCTTCAGGAGGTTATCTCAAGGAAAGATCAAGAACAATATTGGTGTCA 1295
|| ||||| ||||||||||||||||| || || ||||||||||||||||||||||| ||
Sbjct 1207 -GTCGCTGACTTCCTTCAGGAGGTTATGTCTAGAAAAGATCAAGAACAATATTGGTGCCA 1265
Query 1296 CAGA-GACAAACCATATTGCTATGTCTCTATTGATTCATTTATTGAGAAATTTAAA-AAG 1353
|| | | ||| || ||| | ||| | ||| |||||||||| ||| |||| |||||| ||
Sbjct 1266 CATAAG-CAAGCCCTATAGTTATATATCTGTTGATTCATTCATTAAGAAGTTTAAAGAA- 1323
Query 1354 TCTGATCTTGGGCTACAACTACAA-GACGAACTCTCCAAGACATAT-GACAAGTCTCAGA 1411
|| |||||||| | | | | || || ||||| || ||| | | | || || || ||||
Sbjct 1324 TCAAATCTTGGGTTTCTGC-AGAAAGAAGAACTGTCAAAGCCGT-TCGATAAATCCCAGA 1381
Query 1412 CTCAAAAGGATGGACTGTGCATTAGAAAATACTCACTTAGTAACTGGGATATGTTTAAAG 1471
|||| | |||||| || || |||||||||||||||| |||| ||||| ||| ||||||
Sbjct 1382 CTCACATGGATGGTCTATGTTTTAGAAAATACTCACTGGGTAAATGGGAGATGCTTAAAG 1441
Query 1472 CTTGCTCAAGGAGAGAATTTCTTCTGATGAAACGTAACTCTTTCGTTTACGTATTCAAAT 1531
|||| || ||||||||||||||| |||||||||| || |||| | ||||| | |||||||
Sbjct 1442 CTTGTTCGAGGAGAGAATTTCTTTTGATGAAACGGAATTCTTCCATTTACTTGTTCAAAT 1501
Query 1532 CTGGACTTTTAATATTCATTG-GATCCATTG-CAATGACTGTTTATCTACG-GACTGG-G 1587
||||||| ||| | |||| || | | | | ||||||| ||| ||||| | |||| |
Sbjct 1502 CTGGACTATTAGTGTTCAATGCGTT--AGTCACAATGACCATTTTTCTACAAG-CTGGAG 1558
Query 1588 TCTACAAGAGATTCTCTTCATGCTAATTATCTTTTGGGTTCTTTGTTCTTTTCCCTCATT 1647
|||| || ||| ||| ||||| ||||||||| |||||||| |||||| | | ||| ||
Sbjct 1559 -CTACGAGGGATGCTCGTCATGGGAATTATCTTATGGGTTCTATGTTCTCTGCTCTCTTT 1617
Query 1648 AAACTTCTTGCTGATGGACTACCAGAACTCACATTGAC-AGTCTCGAGAATTGCG-GTGT 1705
| ||||||||| ||||| || ||||||||||| ||||| | |||| ||| ||| | ||||
Sbjct 1618 AGACTTCTTGCCGATGGGCTTCCAGAACTCACTTTGACTA-TCTCTAGA-TTGGGAGTGT 1675
Query 1706 TCTGCAAACAAAAAGAGTTATACTTT-TATCCTGCTTGGGCATATGCTATTCCTTCTGCT 1764
|||||||||| ||||| ||||| ||| |||||||||||||||||||| |||||||| |
Sbjct 1676 TCTGCAAACAGAAAGATTTATA-TTTCTATCCTGCTTGGGCATATGCAATTCCTTCAATT 1734
Query 1765 ATTTTAAAGATACCGATTTCATTTCTTGAATCATTCCTCTGGACAATGT-TGACATATTA 1823
|| |||| |||||| |||| |||| || |||||| | |||||| | ||||||||||
Sbjct 1735 ATCTTAAGGATACCTCTTTCGGTTCTCGATTCATTCATTTGGACA-TCACTGACATATTA 1793
Query 1824 TGTCATTGGTTACAGTCCTGAGG-CGGGAAGGTTCATTC-GCCAGGTC-TTGATCTTATT 1880
|||||||||||| ||||| || | ||| ||||||| ||| | || || || |||||| |
Sbjct 1794 TGTCATTGGTTATAGTCCCGAAGTCGG-AAGGTTC-TTCCGGCATTTCATT-ATCTTACT 1850
Query 1881 TGCTCTACACCTTTCGTGTATATCGATGTTCCGTGCTATAG-GTGCTGTCTTTCG-AGAT 1938
| || | |||||||| |||||||| ||||| || ||||||| || | ||| ||| | ||
Sbjct 1851 TACTTTCCACCTTTCATGTATATCAATGTTTCGCGCTATAGCGT-CAATCTGTCGTACAT 1909
Query 1939 TTTGATG-TTGC-CACTACCATTGGAAGC-ATCTCTATAGTGCTTCTCTCAGTATTCGGA 1995
|| | || |||| || | | | |||| || || || || || ||||| || ||||||||
Sbjct 1910 TT-GTTGCTTGCTCAAT-C-ACTGGA-GCTATTTCGGTATTGGTTCTCGCATTATTCGGA 1965
Query 1996 GGTTTCATTGTTCGAAAACCCTCAATGCCTTCTTGGCTTGAGT-GGGGATTCTGGCTTTC 2054
|| |||||| ||| |||| | || |||||| ||||||| | || ||||||||||||||||
Sbjct 1966 GGCTTCATTATTCCAAAATCGTCCATGCCTACTTGGCTGG-GTTGGGGATTCTGGCTTTC 2024
Query 2055 TCCACT-GTCATATGCTGAGATTGGTCTAACCTCAAATGAATTTTTCGCTCCAATGTGGA 2113
||| || ||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct 2025 TCC-CTTGTCATATGCTGAGATTGGTCTAACCGCAAATGAATTTTTCGCTCCGCGGTGGA 2083
Query 2114 GGAAGATGA-CATCTGAAAACAGAACTTTGGGGGAACAAGT-TCTAGATGCTCGCG-GG- 2169
| ||| | | | |||| |||| || ||||||||||| | |||||| || || ||
Sbjct 2084 GAAAGTTAATC-TCTGGCAACACTACAGCCGGGGAACAAGTGT-TAGATG-TC-CGTGGA 2139
Query 2170 TTGAATTTTGGAAATCAATCTTACTGGA-ATGCATTTGGCGCATTGATTGGCTTCACACT 2228
||||||||||| | || |||||||||| | || ||||| || || || || || ||
Sbjct 2140 TTGAATTTTGGTAGGCACTCTTACTGGACA-GCTTTTGGTGCTTTAATCGGGTTTGT-CT 2197
Query 2229 C-TTCTTCAATACTGTTTTTGCAC-T-GGCCTTGACCTTTTTGAAGACTTCACAGAGGTC 2285
||||||||| | | | ||| | |||| |||| | | ||| | | |||| || ||
Sbjct 2198 TGTTCTTCAATG-TCCTCTA-CACGTTGGCCCTGACATATCGGAATAATCCACAAAGATC 2255
Query 2286 TCGTG-TAATTGTTTCTCATG-ACAAGAACACTCAAAGCTCAG-AGAAAGATTCTAAAAT 2342
|||| || || | || |||| | |||||| |||| |||||| |||| |||| ||||
Sbjct 2256 CCGTGCTA-TTATCTCGCATGGA-AAGAACTCTCAGTGCTCAGTAGAA-GATTTTAAACC 2312
Query 2343 -TGC--T----TC-C--C-ATT-C-----CA--AAAA-T--GCATTGCC-TTTCGAA-CC 2378
||| | || | | | | || |||| | || ||||| ||| || ||
Sbjct 2313 CTGCCCTGAAATCACTTCGAGAGCTAAAACAGGAAAAGTTAGC-TTGCCCTTT--AAGCC 2369
Query 2379 TCTAACTTTCACATTTCAAGACGTACAATATTTTATTGAGACTCCTCAGGGAAAGAAGCT 2438
|| ||| ||||||||||| |||| || |||| |||||| |||||||||||||||| ||
Sbjct 2370 ACTCACTGTCACATTTCAAAACGTGCAGTATTATATTGAAACTCCTCAGGGAAAGACGCG 2429
Query 2439 GCAGCTTCTCTCTGACGTTACAGGTGCATTCAAGCCCGGTGTTCTCAC-TGCTCTAATGG 2497
||| ||||||||||| ||||||| || || |||||||| |||||||| | |||||||||
Sbjct 2430 GCAACTTCTCTCTGATATTACAGGCGCGTTGAAGCCCGGAGTTCTCACGT-CTCTAATGG 2488
Query 2498 GTGTGAGTGGCGCTGGTAAAACGACTCTGCTTGACGTTCTCTCAGGAAGGAAAACCCGCG 2557
|||| ||||| || || ||||||||||| ||||| || || || ||||||||||||||||
Sbjct 2489 GTGTCAGTGGAGCAGGGAAAACGACTCTTCTTGATGTCCTTTCTGGAAGGAAAACCCGCG 2548
Query 2558 GTGA-CATTAAAGGACAGATTGAAGTAGGCGGTTA-CGTTAAGGTTCAAGACACATTTTC 2615
|| | ||| |||||| |||| |||||||||| || | | ||||||||||| |||||| |
Sbjct 2549 GT-ATCATCAAAGGAGAGATCAAAGTAGGCGGGTATCCT-AAGGTTCAAGAAACATTTGC 2606
Query 2616 GCGGGTTTCAGGTTATTGTGAACAGTTTGATATCCATTCTCCCAACT-TAACAGTCCAAG 2674
|| || |||| ||| ||||||||||||||||| |||||||| || | |||| || |||
Sbjct 2607 ACGAGTATCAGCTTACTGTGAACAGTTTGATATTCATTCTCCTAA-TATAACTGTGGAAG 2665
Query 2675 AGTCCCTGAAATACTCTGCTTGGCTTCGACTTCCTTGTAACATT-AGTTCAGAA-ACTAA 2732
|||| ||||||| ||||| ||||||||||| || | |||||| | || | || || ||
Sbjct 2666 AGTCTTTGAAATATTCTGCATGGCTTCGACTCCCCTATAACATCGATTT-A-AAGACAAA 2723
Query 2733 GAGTGCAA-TAGTTAATGAAGTTCTTGAGAC-GATAGAGCTTGAGGAGATTAAAGATTCC 2790
|| | || | || || ||||| || ||||| | | ||||||||| | || |||||||||
Sbjct 2724 GAACG-AACTCGTCAAAGAAGTCCTCGAGACAGTT-GAGCTTGAGAATATCAAAGATTCC 2781
Query 2791 TTAGTAGGAGTTCCTGGAATTAGCGGTGTAAC-AGCAGAACAACGCAAAAGACTAACAAT 2849
| || ||| |||||||||| || ||| || | | |||||||||||||||| || || ||
Sbjct 2782 ATGGTGGGACTTCCTGGAATAAGTGGTTTATCTA-CAGAACAACGCAAAAGGCTGACTAT 2840
Query 2850 AGCTGTGGAGCTTGTTTCCAATCCTTCAATAATATTTATGGATGAACCAACCACAGGATT 2909
||| |||||||||||| | || ||||| || |||||| |||||||||| |||||||| |
Sbjct 2841 AGCCGTGGAGCTTGTTGCTAACCCTTCCATCATATTTCTGGATGAACCTACCACAGGGCT 2900
Query 2910 AGATGCAAGAGCTGCAGCAATTGTAATGAGAGCTGTGAAGAACATCGCCGAGACTGGCAG 2969
|| |||||||| ||||| ||||| |||||||||||||| || | || |||||||| ||
Sbjct 2901 GGACGCAAGAGCCGCAGCCATTGTTATGAGAGCTGTGAAAAATGTTGCTGAGACTGGGAG 2960
Query 2970 AACTGTTGTTTGCACAATTCACCAGCCGAGCATAGATATCTTTGAGGCATTTGATGAGCT 3029
||| ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||
Sbjct 2961 AACGGTTGTTTGCACGATCCACCAGCCGAGCATAGATATCTTTGAGACATTTGATGAGCT 3020
Query 3030 GATTCTGATGAAAAATGGAGGAAAGATTATCTATTACGGACCTCTTGGACAACATTCAAG 3089
||| ||| ||||| |||| ||| | || |||| || || ||||||||| ||||||||||
Sbjct 3021 GATCCTGTTGAAAGATGGGGGACATCTTGTCTACTATGGTCCTCTTGGAAAACATTCAAG 3080
Query 3090 CAAAGTTATTGAATACTTT-ATGAGCATTCCTGGAGTTCCAAAACTGAAAGAA-AACTCT 3147
|| ||||| ||||||||| | |||| | ||||||||||||||| | || || || | |
Sbjct 3081 TAAGGTTATCGAATACTTTGA-GAGCGTCCCTGGAGTTCCAAAAGTTCAA-AAGAATTGT 3138
Query 3148 AACCCAGCCACTTGGATACTT-GACATTACTTCTAAATCAT-CAGAAGACAAACTTGGTG 3205
|| |||||||||||||| || || ||||||| |||||| | |||| |||| ||||||
Sbjct 3139 AATCCAGCCACTTGGATG-TTAGATATTACTTGTAAATC-TGCAGAGGACAGACTTGGAA 3196
Query 3206 TTGATTTGGCACATAT-ATACGAGGAATCGACTTTGTTTAAGGAGAACAAAATGGTAATT 3264
| ||||| ||||| | |||| | || || ||| ||| ||||||||||||||||| ||
Sbjct 3197 TGGATTTTGCACA-AGCATACAAAGATTCAACTCTGTACAAGGAGAACAAAATGGTGGTT 3255
Query 3265 GAGCAAAC-GAGATGTACATCTTTGGGATCAGAAAGAT-TAATCTTGTCAT-CACGTTAT 3321
|||||| | ||| | | | ||| |||||||| |||| | | | ||| || | | |||| |
Sbjct 3256 GAGCAA-CTGAGTTCTGCGTCTCTGGGATCA-AAAGCTCTGAGCTT-TCCTTCGCGTTTT 3312
Query 3322 GCTCAAACGAG-TTGGGAACAATTCAAAG-CATGCCTCTGGAAACAACATCT-CTCTTAT 3378
| ||||| || |||||| ||| | |||| | ||||| |||||||||||| | ||| |||
Sbjct 3313 TCACAAAC-AGGTTGGGAGCAACT-AAAGGCTTGCCTTTGGAAACAACAT-TGCTCGTAT 3369
Query 3379 TGGAGAAACCCTTC-CTACAATCTCACTCGCATCATT-TTCATG-TGTTTTACTTGTATG 3435
|||||||||||||| | | |||||||||||||| | | ||||| || | | || | ||
Sbjct 3370 TGGAGAAACCCTTCGC-ATAATCTCACTCGCAT-AGTCTTCATAATGCTCAA-TTCTCTG 3426
Query 3436 CTCTGTGGCATTCTTTTCTTGCAAAAAGCTAAGGAAATAAACAATCAGCAAGATCTATTC 3495
| | |||| |||| |||| ||||||||||||||| ||||| |||||||||||||| |||
Sbjct 3427 TTATCTGGCCTTCTCTTCTGGCAAAAAGCTAAGGACATAAATAATCAGCAAGATCTTTTC 3486
Query 3496 AACGTCTTTGGCTCAATGTTTACGGTGGTTCTATTCTCTGGAATAAACAATTGCT-CAAC 3554
| | | ||||||||||||| || | || | ||||| ||||||||||| || | | ||
Sbjct 3487 AGCATATTTGGCTCAATGTACACTCTAGTAATCTTCTCAGGAATAAACAACTG-TGCGAC 3545
Query 3555 AGTGAT-ATTTTGCGTTGCAACCGAACGAAATGTCTTCTACCGCGAAAGATTTTCCCGTA 3613
|||||| | || | ||||||| ||||| ||||| ||||| || ||||| ||| | || |
Sbjct 3546 AGTGATGAACTT-CATTGCAACTGAACGCAATGTTTTCTATCGTGAAAGGTTTGCGCGGA 3604
Query 3614 TGTACAACC-CATGGGCGTATTCCCTTGCTCAGGTGTTGGTTGAAATTCCATACTCATTG 3672
||||| || ||||||||||||| || ||||||| | ||||| ||||||||||| |
Sbjct 3605 TGTACT-CCTCATGGGCGTATTCATTTTCTCAGGTCCTAGTTGAGGTTCCATACTCACTA 3663
Query 3673 TTCCAATC--TATTATATATGTGATAATCGTATATCCTATGGTTGGCTATCAC-TGGTCG 3729
|||| || || ||| || | || || |||||||||||| | ||||| || || ||
Sbjct 3664 CTCCAGTCCCTACTATGTAC-T-ATCATTGTATATCCTATGATCGGCTACCATATG-TCT 3720
Query 3730 GTCTACAA-AGTGTTTTGGAGCTTCTACT-CAATTTTCTGCTCCTTGCTTATCTTCAACT 3787
|| ||||| | ||||||||||||| ||| || | |||||||| || |||||||||||||
Sbjct 3721 GTTTACAAGA-TGTTTTGGAGCTTGTACAGCA-TCTTCTGCTCGTTACTTATCTTCAACT 3778
Query 3788 ATT-TCGGCATGCTTTTAGTTG-TGGTGACCCCAAACGTTCACATTGCTTTTACTCTCCG 3845
||| | || |||||| | |||| | |||| |||||| ||||||| || || ||| | ||
Sbjct 3779 ATTGTGGG-ATGCTTATGGTTGCTT-TGACGCCAAACATTCACATGGCATTAACTTTACG 3836
Query 3846 CTCTTCATTTTACGCAATCGTCAATCTCTTTGCTGG-TTATGTCATGCCAAAACCTAACA 3904
||| | |||| | | || || ||||| |||||||| || |||||||||||||| || |
Sbjct 3837 CTCAACTTTTTTCTCCATGGTGAATCTGTTTGCTGGCTT-TGTCATGCCAAAACAGAAAA 3895
Query 3905 TTCCGAGATGGTGGATTTGGATGTATTACTTGAGCCCGACGTCATGGGTTTTG-AACGGA 3963
| || | ||||||||| |||||||| |||||||||||||| || |||| ||| || |||
Sbjct 3896 TCCCAAAATGGTGGATATGGATGTACTACTTGAGCCCGACATCGTGGGCATTGGAA-GGA 3954
Query 3964 TTGCTCACATCGCAGTATGGAGATATGGAGAAAGAGATATTAGCGTTTGGAGAGAAGAAG 4023
|| || | || |||||||||||| |||||||||||||| ||| |||||||||||||||
Sbjct 3955 TTACTGAGTTCACAGTATGGAGATGTGGAGAAAGAGATAATAGTATTTGGAGAGAAGAAG 4014
Query 4024 AAAGTTTCAGCTTTCTTGGAAGATTATTTTGGCTACAGATATGACTCTCT-GGCTCTTGT 4082
| |||||||||||||||||| || || || || |||| | ||||||| || |||| ||||
Sbjct 4015 AGAGTTTCAGCTTTCTTGGAGGACTACTTCGGTTACAAACATGACTC-CTTGGCTGTTGT 4073
Query 4083 AGCTGTT-GTTCTTATTGCCTTCCCCATTCTC-TTGGCATCTCTTTTTGCCTTCTTCATT 4140
||| ||| ||||| || | || || ||| || ||| | ||||||||||||||||||||
Sbjct 4074 AGC-GTTTGTTCTCATCGGTTTTCCTATTATCGTTG-CTTCTCTTTTTGCCTTCTTCAT- 4130
Query 4141 G-GTAAACTCAATTTCCAAAAGAA 4163
| | ||||||||||| ||||||||
Sbjct 4131 GAGCAAACTCAATTTTCAAAAGAA 4154
> Ahg890779 jgi|Araly1|890779|Al_scaffold_0007_2765
Length=3450
Score = 510 bits (276), Expect = 3e-143
Identities = 516/631 (82%), Gaps = 20/631 (3%)
Strand=Plus/Plus
Query 805 ATGAAGGCAGCT-TCTATTG-AGGGTTCAAAAACAAATCTGCAAACCGACTATATCTTAA 862
||||||||| | ||| ||| ||| || |||||| ||| ||||||| ||||||||| |||
Sbjct 1 ATGAAGGCA-ATATCTGTTGAAGGTTTGAAAAAC-AATTTGCAAACTGACTATATCCTAA 58
Query 863 AAATCCTAGGACTC-ACTATCTGTGCAGATACACGTGTTGGAGATGCTTCGAGACCAGGA 921
| |||||||||||| | |||||||||||||||||| ||||||||||| ||||||| |||
Sbjct 59 AGATCCTAGGACTCGA-TATCTGTGCAGATACACGAGTTGGAGATGCCACGAGACCTGGA 117
Query 922 ATATCTGGTGGCCAAAAGAGAAGATTAACTACAGGTGAGA-T-GATTGTAGGTCCAATC- 978
|||||||||||||||||||| || || || ||||| || | | | |||| ||||| | |
Sbjct 118 ATATCTGGTGGCCAAAAGAGGAGGTTGACAACAGGGGA-ACTCG-TTGTGGGTCC-AGCT 174
Query 979 A-AAACTCTGTTCATGGATGAAATATCGAATGGTTTGGATAGTTCAACTACATTCCAGAT 1037
| | || |||||||||||||||||||||||||||| || || |||||||| ||||||||
Sbjct 175 ACTACCT-TGTTCATGGATGAAATATCGAATGGTTTAGACAGCTCAACTACGTTCCAGAT 233
Query 1038 TCTATCATGTCTCCAACAGTTTGCACGTCTATCTGAAGGAACCATATTGGTTTCACTGCT 1097
| ||||||||||||||| | |||| | || |||||| |||||| || ||||||| ||
Sbjct 234 AGTGTCATGTCTCCAACAGATGGCACATATAGCTGAAGCCACCATACTGATTTCACTTCT 293
Query 1098 TCAGCCTGCACCAGAAACGTTTGAGCTTTTCGACGATTTGATTCTTATGGGAGAAGGAAA 1157
||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct 294 TCAGCCTGCGCCAGAAACGTTTGAGCTTTTCGACGATGTGATTCTTATGGGGGAAGGAAA 353
Query 1158 GATAATCTATCACGGTCCACGGGATTTTATATGTAGTTTCTTTGAGGATTGTGGATTTAA 1217
|||||| || || | |||||| | | ||| || || |||||||| || |||||||||||
Sbjct 354 GATAATTTACCATGCTCCACGAGCTGATATCTGCAGATTCTTTGAAGACTGTGGATTTAA 413
Query 1218 ATGTCCACAGAGGAAAT-CTGTTGCTGAATTCCTTCAGGAGGTTATCTCAAGGAAAGATC 1276
|||||| |||||||| | |||||||| ||||| || |||||||| || || |||||||
Sbjct 414 GTGTCCAGAGAGGAAAGGC-GTTGCTGACTTCCTCCAAGAGGTTATGTCTAGAAAAGATC 472
Query 1277 AAGAACAATATTGGTGTCACAGAGACAAACCATATTGCTATGTCTCTATTGATTCATTTA 1336
|||||||||||||||| |||| || ||| || || | ||| | ||| |||||||||| |
Sbjct 473 AAGAACAATATTGGTGCCACAAAGGCAAGCCCTACAGTTATATATCTGTTGATTCATTCA 532
Query 1337 TTGAGAAATTTAAA-AAGTCTGATCTTGGGCTACAACTACAAG-ACGAACTCTCCAAGAC 1394
|| | || |||||| || || |||||||| | | ||| ||| | ||||| || ||| |
Sbjct 533 TTAATAAGTTTAAAGAA-TCAAATCTTGGGTTGCTGCTA-AAGGAAGAACTGTCAAAGCC 590
Query 1395 ATATGACAAGTCTCAGACTCAAAAGGATGGA 1425
| ||| || || ||||||| |||||||||
Sbjct 591 GTTTGATAAATCCCAGACTCGCAAGGATGGA 621
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 157558352220
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5