BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G15350.1 Length=1561 Score E Sequences producing significant alignments: (Bits) Value Ahg493358 jgi|Araly1|493358|fgenesh2_kg.7__2791__AT4G15350.1 2248 0.0 Ahg494842 jgi|Araly1|494842|fgenesh2_kg.8__658__AT5G47990.1 1293 0.0 Ahg473062 jgi|Araly1|473062|fgenesh2_kg.1__3016__AT1G28430.1 483 2e-135 Ahg933050 jgi|Araly1|933050|scaffold_401038.1 276 4e-73 Ahg930044 jgi|Araly1|930044|scaffold_302501.1 167 3e-40 > Ahg493358 jgi|Araly1|493358|fgenesh2_kg.7__2791__AT4G15350.1 Length=1564 Score = 2248 bits (1217), Expect = 0.0 Identities = 1454/1569 (93%), Gaps = 13/1569 (1%) Strand=Plus/Plus Query 1 ATGGCAGTATTGATCATCTTCATCCTCTTATGTCTCTTGTCATTCCTATGTTACTCTCTC 60 ||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct 1 ATGGCAGCATTGATCATCTTCATCCTCTTATGTCTCTTCACATTCCTCTGTTACTCTCTC 60 Query 61 TTCTTCATGAAACCTAAA-GATTCACGAGATGGCCGTGACCTTCCTCCGAGCCCTCCTTC 119 |||||||||||||| ||| || |||||||||| |||||||||||||||||| |||||||| Sbjct 61 TTCTTCATGAAACC-AAAGGACTCACGAGATGACCGTGACCTTCCTCCGAGTCCTCCTTC 119 Query 120 TCTTCCAATCATCGGTCATCTTCACCTAATTCTTCTGTCTACTTTAACCCACAAGTCTTT 179 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 120 TCTTCCTATCATCGGTCATCTTCACCTAATTCTTCTCTCTACTTTAACCCACAAGTCTTT 179 Query 180 TCAGAGACTCTCATCAAAGTATGGGCCTCTTCTCCATCTCCGCATCTTCCACGTACCTAT 239 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| || || Sbjct 180 TCAGAGACTCTCATCCAAGTATGGACCTCTTCTCCATCTCCGCATCTTCCACGTTCCCAT 239 Query 240 AGTCCTCGCCTCCTCAGCCTCAGTGGCCTACGAAATCTTCAGGGACCAAGACGTGAATGT 299 ||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct 240 TGTCCTCGTCTCCTCGGCCTCAGTGGCCTACGATATCTTCAGGGACCAAGACGTGAATGT 299 Query 300 ATCATTTCGGCATTCGCCTCCGATTGAAGAGTCTCTCTTTTTGGGGTCGTATAGCTTCAT 359 ||| ||||||||||| |||||||| || ||||||||||||||||| |||||||||||||| Sbjct 300 ATCCTTTCGGCATTCCCCTCCGATCGAGGAGTCTCTCTTTTTGGGATCGTATAGCTTCAT 359 Query 360 TAGCGCCCCCTATGGAGATTACTGGAAATTCATGAGGAAGCTCATGGTTACCAAGATTCT 419 ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 360 CAGCGCTCCTTATGGAGATTACTGGAAATTCATGAGGAAGCTCATGGTTACAAAGATTCT 419 Query 420 TGGACCGCAGGCACTCGAGCGGTCACGAAGATTCCGTGAAGATGAGCTTGATAGGTTTTA 479 ||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||| || Sbjct 420 TGGACCGCAAGCACTCCAGCGGTCACGAAGATTCCGTGAAGATGAGCTTGATCGGTTCTA 479 Query 480 TAAAACTCTGCTCGACAAGGCGATG-AAGAAGGAGAGTGTTGAGATTGTTGAGGAAGCAG 538 |||| ||| ||||| ||||||| | |||||||||| ||||||||| | ||||||||||| Sbjct 480 CAAAAATCTACTCGATAAGGCGA-GTAAGAAGGAGATTGTTGAGATCGGTGAGGAAGCAG 538 Query 539 CGAAGCTCAATAACAACACCATCTGCAAGATGATCATGGGGAGGAGTTGTTCTGAGGAGA 598 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 539 CGAAGCTCAATAACAACACCATCTGCAAGATGATCATGGGGAGGAGTTGTTCTGAGGAGA 598 Query 599 CCGGTGAGGCGGAGAGAATCAGAGGCTTGGTGACTGAATCAATGGCTTTGACAAAGAAAA 658 ||||||||| ||||| ||||||||||||||||||| |||||||| ||||||||||||| Sbjct 599 GCGGTGAGGCAGAGAGGGTCAGAGGCTTGGTGACTGAGTCAATGGCCTTGACAAAGAAAA 658 Query 659 TTTTCTTGGCGACCATCTTTCACAAACCGCTTAAGAAGCTCGGGATCTCACTTTTCAAAA 718 |||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| Sbjct 659 TTTTCTTGGCGACCATCTTTGACAAACCACTTAAGAAGCTCGGGATCTCACTGTTCAAAA 718 Query 719 AGGAGATAATGAGTGTTTCCCGCAAGTTCGATGAGCTACTAGAGAAGATTCTTGTGGAAC 778 ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||| Sbjct 719 AGGAGATAATGAGTGTTTCCCACAAGTTCGACGAGCTGCTAGAGAAGATTCTTGTGGAAC 778 Query 779 ACGAAGAGAAAATGGAGGAGCATCATCAAGGTACTGATATGATGGATGTGTTGTTGGAAG 838 || |||||||| |||| ||| |||||||||||||||| |||||||||||||||||||||| Sbjct 779 ACAAAGAGAAACTGGACGAGGATCATCAAGGTACTGACATGATGGATGTGTTGTTGGAAG 838 Query 839 CTTATCGAGACGAAAACGCTGAGTATAAGATCACAAGAAACCATATCAAGTCAATGTTTG 898 ||||| |||||||||||| |||||||| ||||||||||||||||||||||| |||||| Sbjct 839 CTTATAAAGACGAAAACGCAGAGTATAAAATCACAAGAAACCATATCAAGTCCTTGTTTG 898 Query 899 TGGATCTTTTCATTGCTGGTACTGATACATCATCAACCACTATACAATGGATCATGGCGG 958 |||| ||||||||||| || ||||| || ||||| ||||||||||| ||||||||||||| Sbjct 899 TGGAACTTTTCATTGCAGGCACTGACACCTCATCGACCACTATACAGTGGATCATGGCGG 958 Query 959 AGATCATTAACCATCCCAAGATTCTTGAGAGGCTAAGAGAAGAAATCGATTTTGTTGTAG 1018 ||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||| Sbjct 959 AGATCATTAACCATCCCAAGATTCTTGAGAGACTAAGAGAAGAAATCAATTCCGTTGTAG 1018 Query 1019 GGAAAA-CAAGGTTGATTCAAGAAACTGACCTACCGAACCTCCTTTACTTGCAAGCGATA 1077 |||||| | || |||||||||||||||||| |||| ||||||| |||||||||||| ||| Sbjct 1019 GGAAAAGC-AGATTGATTCAAGAAACTGACTTACCCAACCTCCCTTACTTGCAAGCAATA 1077 Query 1078 ATCAAAGAAGGGCTAAGATTGCATCCGCCGGGGCCACTCTTACCAAGAACGGTCCAAGAA 1137 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 1078 ATCAAAGAAGGGCTAAGATTGCATCCGCCGGGGCCTCTCTTGCCAAGAACGGTCCAAGAA 1137 Query 1138 AGGTGTGAAATTAAAGGGTTCCACATACCAGAGAAGACTATACTTGTTGTCAATTCTTAT 1197 ||||||||||||| |||||||||||||||||||||||| || ||| |||| ||||||||| Sbjct 1138 AGGTGTGAAATTAGAGGGTTCCACATACCAGAGAAGACAATTCTTATTGTTAATTCTTAT 1197 Query 1198 GCTATAATGAGAGATCCTGATTTTTGGGAAGATCCTGACGAGTTTAAGCCAGAGAGATTT 1257 |||||||||||||||||||||| |||||||||||| || |||||||| || ||||| ||| Sbjct 1198 GCTATAATGAGAGATCCTGATTATTGGGAAGATCCGGAGGAGTTTAAACCTGAGAGGTTT 1257 Query 1258 TTATCTATTT-CAAGATCAGGGCAAGAGGACGAGATAAGAGATAAATTCCTAAAATACAT 1316 ||| | ||| |||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct 1258 TTAGGT-TTTCCAAGATCAGGACAAGAGGACGAGATAAGAGATAAATTCCTAAAATATAT 1316 Query 1317 TCCTTTTGCCAGCGGCAGGAGAGGTTGTCCAGGAACAAATCTAGCTTATGCT-TCTGTAG 1375 ||||||||||||||| |||||||||||||| ||||||||||||||| ||| | ||||||| Sbjct 1317 TCCTTTTGCCAGCGGAAGGAGAGGTTGTCCTGGAACAAATCTAGCTCATG-TCTCTGTAG 1375 Query 1376 GAACCGCGGTTGGAGTGATGGTGCAATGCTTTGATTGGAAAATTGAAGGAGAGAATGTCA 1435 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||| Sbjct 1376 GAACCGCGGTTGGAGTGATGGTGCAGTGCTTTGATTGGAAAATCAAAGGAGAGAAAGTCA 1435 Query 1436 ACATGAATGAGGCTGCTGGAACAATGGTGTTGACCATGGCTCACCCTCTTAAGTGCACTC 1495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1436 ACATGAATGAGGCTGCTGGAACAATGGTGTTGACCATGGCTCACCCTCTTAAGTGCACTC 1495 Query 1496 CTGTTCCTCGAACCCTAAACCTTTTA---CCTCCCTAGTTCTTGACTTGGGGATGTCAGC 1552 |||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||| Sbjct 1496 CTGTTCCTCGAACCCTAAACCTTTTATTACCTTCCTAGTTCTTGACTTGGAGATGTCAGC 1555 Query 1553 TTGCTTTCT 1561 ||||||||| Sbjct 1556 TTGCTTTCT 1564 > Ahg494842 jgi|Araly1|494842|fgenesh2_kg.8__658__AT5G47990.1 Length=1715 Score = 1293 bits (700), Expect = 0.0 Identities = 1260/1527 (83%), Gaps = 52/1527 (3%) Strand=Plus/Plus Query 14 TCATCTTCATCCTCTTATGTCTCTTGTCATTCCTATGTTACTCTCTCTTCTTCATGAAAC 73 |||||||| ||||||||||||| |||||| ||| | |||| ||| ||||||| ||||| Sbjct 38 TCATCTTCGTCCTCTTATGTCTTTTGTCACGCCTCTTTTACGATCTTTTCTTCAGGAAAC 97 Query 74 CTAAAGATTCACGAGATGGCCGTGACCTTCCTCCGAGCCCTCCTTCTCTT-CCAATCATC 132 | ||||| ||||||| |||| |||| |||||||||||||||| || || || ||||| Sbjct 98 CAAAAGACTCACGAGCTGGCTGTGATTTTCCTCCGAGCCCTCCATC-ATTACCGATCATT 156 Query 133 GGTCATCTTCACCTAATTCTTCTGTCTACTT-TAACCCACAAGTCTTTTCAGAGACTCTC 191 || ||||||||||| | || ||| | | || || |||| ||||||| |||| | || | Sbjct 157 GGGCATCTTCACCTTA-TCCTCT-T-T-GTTCCAATCCACCAGTCTTTCCAGAAAATCGC 212 Query 192 AT-CAAAGTATGGGCCTCTTCTCCATCTCCGCATCTTCCACGTACCTATAGTCCTCGCCT 250 || |||| ||||| ||||| ||||| |||||| ||||| || | || |||||||| | || Sbjct 213 ATCCAAA-TATGGACCTCTCCTCCACCTCCGCTTCTTCAACTTCCCCATAGTCCTTGTCT 271 Query 251 CCTCAG-CCTCAGTGGCCTACGAAATCTTCAGGGACCAAGACGTGAATGTATCATTTCGG 309 |||| | ||||| |||||||||| ||||||| || ||||||||||||||| || | ||| Sbjct 272 CCTC-GCCCTCAATGGCCTACGAGATCTTCAAGGCCCAAGACGTGAATGTCTCCTCTCGC 330 Query 310 CATTCGCCTCCGATTGAAGAGTCTCTCTTTTTGGGGTCGTATAGCTTCATTAGCGCCCCC 369 | | | ||||| || || ||||||||| |||| || |||| |||||||| | | | ||| Sbjct 331 CCTCCCCCTCCAATCGAGGAGTCTCTCATTTTAGGATCGTCCAGCTTCATCAACACTCCC 390 Query 370 TATGGAGATTACTGGAAATTCATGAGGAAGCTCATGGTTACCAAGA-TT-CTTGGACCGC 427 || |||||||||| ||||||||||| |||| |||||| | |||| | || || ||||||| Sbjct 391 TACGGAGATTACTCGAAATTCATGAAGAAGTTCATGG-T-CCAAAAGTTGCTCGGACCGC 448 Query 428 AGGCACTCGAGCGGTCACG-AAGATTCCGTGAAGATGAGCTTGATAGGTTTTA-TAAAAC 485 |||||||| | | ||| || |||| |||||| ||||||||| ||| |||| || ||||| Sbjct 449 AGGCACTCCAACAGTCGCGAAAGA-TCCGTGCAGATGAGCTGGATCGGTTCTACAAAAAC 507 Query 486 TCTGCTCGACAAGGCGATGAAGAAGGAGAGTGTTGAGATTGTTGAGGAAGCAGCGAAGCT 545 ||||| || |||||||||||||| ||||| |||||||||| | | |||||| |||||| Sbjct 508 -CTGCTTGATAAGGCGATGAAGAATGAGAGCGTTGAGATTGGTAATGAAGCAATGAAGCT 566 Query 546 CAATAACAACACCATCTGCAAGATGATCATGGGGAGGAGTTGTTCTGAGGAGACCGGTGA 605 || |||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||| Sbjct 567 CACTAACAACACCATCTGCAAGATGATTATGGGGAGGAGTTGTTCCGAGGAGAACGGTGA 626 Query 606 GGCGGAGAGAATCAGAGGCTTGGTGACTGAATC-AATGGCTTTGACAAAGAAA-ATTTTC 663 ||| |||| | ||||||||||||| || || || | | | |||||||||||| | |||| Sbjct 627 GGCTGAGACAGTCAGAGGCTTGGTAACCGAGTCGATTTTC-TTGACAAAGAAACA-TTTC 684 Query 664 TTGGCGACCATCTTTCACAAACCGCTTAAGAAGCTCGGGATCTCACTT-TTCAAAAAGGA 722 |||| | |||| ||||||||||||||||||||||||||||||||| || ||| |||||| Sbjct 685 TTGGGGGCCATGTTTCACAAACCGCTTAAGAAGCTCGGGATCTCA-TTGTTCGCAAAGGA 743 Query 723 GAT-AATGAGTGTTTCCCGCAAGTTCGATGAGCTACTAGAGAAGATTCTTGTGGAACACG 781 || ||||||||||||| |||||| || ||||| || |||||||||||||| |||| | Sbjct 744 -ATTAATGAGTGTTTCCAACAAGTTTGACGAGCTGCTGGAGAAGATTCTTGTTAAACATG 802 Query 782 AAGAGAAAATGGAGGAGCATCATCAAGGTACTGATATGATGGATGTGTTGTTGGAAGCTT 841 |||||||| || |||||||||||||| ||||||| ||| ||||| ||||||||||||| | Sbjct 803 AAGAGAAATTGCAGGAGCATCATCAATGTACTGACATGTTGGATATGTTGTTGGAAGCGT 862 Query 842 ATCGAGACGAAAACGCTGAGTATAAGATCACAAGAAACCATATCAAGTCAATGTTTGTGG 901 || |||||||||| || ||||| |||||||| ||| |||| |||||||| |||| |||| Sbjct 863 ATGGAGACGAAAAGGCAGAGTACAAGATCACTAGAGACCAAATCAAGTCCTTGTTCGTGG 922 Query 902 ATCTTTTCATTGCTGGTACTGA-TACATCATC-AACCACTATACAATGGATCA-TGGCGG 958 |||| |||| ||| || ||||| | | || | ||| |||||||| |||| || |||||| Sbjct 923 ATCTGTTCAGTGCCGGCACTGAATCC-TCGGCGAAC-ACTATACAGTGGA-CAATGGCGG 979 Query 959 AGATCATTAACCATCCCAAGATT-CTTGAGAGGCTAAGAGAAGAAATCGATTTTGTTGTA 1017 ||||||||||| | || || ||| || ||||| || |||||||||||||||| ||||||| Sbjct 980 AGATCATTAACAAGCCTAACATTTCT-GAGAGACTGAGAGAAGAAATCGATTCTGTTGTA 1038 Query 1018 GGGAAAACAAGGTTGATTCAAGAAACTGACCTACCGAACCTCCTTTACTTGCAAGCGATA 1077 || || | ||||||| ||||||||||||| ||||||||||||| |||||||||||| ||| Sbjct 1039 GGTAATATAAGGTTGGTTCAAGAAACTGATCTACCGAACCTCCCTTACTTGCAAGCCATA 1098 Query 1078 ATCAAAGAAGGGCTAAGATTGCATCCGCCGGGGCCACTCTTACCAAGAACGGTCCAAGAA 1137 |||||||||||||| |||||||||| || || || | || | || || |||||||| Sbjct 1099 GTCAAAGAAGGGCTACGATTGCATCCTCCAGGACCTGTGGTA--AGGA-CGTTCCAAGAA 1155 Query 1138 AGGTGTGAAATTAAAGGGTTCCACATACCAGAGAAGACTAT-ACTTGTTGTCAAT-TCTT 1195 | |||||||| ||||| ||| ||||||| ||||| || | |||| |||| ||| | || Sbjct 1156 ACATGTGAAATCAAAGGATTCTACATACCGGAGAAAAC-ACGACTTTTTGTTAATAT-TT 1213 Query 1196 ATGCTATAATGAGAGATCCTGATTTTTGGGAAGATCCTGACGAGTTTAAGCCAGAGAGAT 1255 ||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| | Sbjct 1214 ATGCTATAATGAGAGATCCTGATTTCTGGGAAGATCCTGAGGAGTTTAAACCAGAGAGGT 1273 Query 1256 TTTTATCTAT-TTCAAGATCAGGGCAAGAGGACGAGATAAGAGATAA-ATTCCTAAAATA 1313 ||||| || | |||||||| ||||||||| || |||| |||||| | || | ||||||| Sbjct 1274 TTTTAACT-TCTTCAAGATTAGGGCAAGAAGATGAGAAAAGAGAGGACATGC-TAAAATA 1331 Query 1314 CATTCCTTTTGCCAGCGGCAGGAGAGGTTGTCCAGGAACAAATCTAGCTTATGCT-TCTG 1372 ||||||||| | ||||| ||||||| |||||| ||| || ||||||||||||| || | Sbjct 1332 CATTCCTTTCGGTAGCGGAAGGAGAGCTTGTCCTGGATCACATCTAGCTTATGCCGTC-G 1390 Query 1373 TAGGAACCGCGGTTGGAGTGATGGTGCAATGCTTTGATTGGAAAATTGAAGGAGAGAATG 1432 | |||| | ||||||||||||||||| ||||||||||| ||| ||||||| || Sbjct 1391 TTGGAAGTGTAATTGGAGTGATGGTGCAAAACTTTGATTGGAGAATCAAAGGAGAAAAAA 1450 Query 1433 TCAACATGAATGAGGCTGCTGGAACAATGGTGTTGACCATGGCTCACCCTCTTAAGTGCA 1492 |||||||||| |||| | |||||||||| ||||||||||||||| |||||| |||||| Sbjct 1451 TCAACATGAAGGAGG--G-TGGAACAATGACGTTGACCATGGCTCAGCCTCTTCAGTGCA 1507 Query 1493 CTCCTGTTCCTCGAACCCTAAAC-CTT 1518 ||||||||||||||||||||||| ||| Sbjct 1508 CTCCTGTTCCTCGAACCCTAAACACTT 1534 > Ahg473062 jgi|Araly1|473062|fgenesh2_kg.1__3016__AT1G28430.1 Length=1562 Score = 483 bits (261), Expect = 2e-135 Identities = 1089/1472 (74%), Gaps = 123/1472 (8%) Strand=Plus/Plus Query 103 CCTCCGAGCCCTCCTTCTCTTCCAATCATCGGTCATCTTCACCTAATTCTTCTGTCTACT 162 ||||| ||||||||||||||||| ||||| ||||||||||||| |||| || | | || Sbjct 118 CCTCCAAGCCCTCCTTCTCTTCCCATCATTGGTCATCTTCACC---TTCTCCTCTTTGCT 174 Query 163 TTAACCCACAAGTCTTTTCAGAGACTCTCAT-CAAAGTATGGGCCTCTTCTCCATCTCCG 221 | || |||||||| |||||| | | |||||| |||| || || ||| |||||||||| || Sbjct 175 TCAATCCACAAGTGTTTTCAAAAAATCTCATCCAAA-TACGGACCTTTTCTCCATCTTCG 233 Query 222 CATCTTCCACGTACCTA-TAGTCCTCGCCTCCTCAGCCTCAGTGGCCTACGAAATCTTC- 279 ||| ||||| || || | || | || | ||||| ||||||| ||| ||||| |||||| Sbjct 234 CATTTTCCATGTCCCCATTA-TTCTTGTGTCCTCTGCCTCAGCGGCTTACGATATCTTCA 292 Query 280 AGGGACCAAGACGTGAATGTATCATT-TC--GG-CAT-TCGC-CTCCGATTGAAGAGTC- 332 ||| | || || | || || || || || || || | || | ||| |||| | | Sbjct 293 AGGCA-CACGATATTAAAGTCTC-TTATCGAGGTGATGTTGCAAT-CGA-TGAA-TG-CA 346 Query 333 TCTCTTTTTGGGGTCGTATAGCTTCA-TT-AGCGCCCCCTATGGAGATTACTGGAAATTC 390 | | | ||| || || | | | | | || || || || | || |||||||||||||||| Sbjct 347 T-TGTGTTT-GGTTCTTCT-GGAT-ATTTCAGAGCTCCATCTGAAGATTACTGGAAATTC 402 Query 391 ATGAGGAAGCTCATGGTTACCAAGATTCTTGGACCGCAGGCACTCGAGCGGTCACGAAGA 450 |||||||||||||| | | | | |||||||| || || || |||||| |||| | Sbjct 403 ATGAGGAAGCTCATCATGGCTAGGGCGCTTGGACCCCAAGCGCTAGAGCGGACACGTGGT 462 Query 451 -TTCCGTGAAGATGAGCTT-GATAGGTTTTATA-AAACTCTGCTCGACAAGGCGATGAAG 507 ||| ||| || |||| || || |||||| ||| ||| | | ||||| |||||||| || Sbjct 463 GTTC-GTGTAGCTGAG-TTAGAAAGGTTTCATAGAAA-TATACTCGATAAGGCGATTAAA 519 Query 508 AAGGAGAGTGTTGAGATTGTTGAGGAAGCA-GCGA-AGCTCAATAACAACACCATCTGCA 565 || | || || |||| | ||| |||||| | || | ||| |||||||||| || | | Sbjct 520 AAACAAAGCCTTAAGATCGGTGAAGAAGCAAG-GATA-CTCGTTAACAACACCCTCGGAA 577 Query 566 AGATGATCATGGGGAGGAGTTGTTCTG-AGGAGACCGGTGAGGCGGAGAGAA-T--CAGA 621 | |||| | | || || |||| ||| | || ||| | ||| | ||| | || | |||| Sbjct 578 AAATGAGCCTTGGAAGTAGTTTTTCAGTAG-AGAACAATGATG-GGACAAAAGTTTCAGA 635 Query 622 GGCTTGGTGACTGAA-TCAA-TGGCTTTGACAAAGAAAATTTTCT-TGGCGACCA-TCTT 677 || | | | || | | || |||| | | || |||| | |||| || | | || Sbjct 636 ATTTTC-T-A-TCAAGTTAGCTGA-TTTGTCTCA-AATGTTTTGTGTGGC-ACAAATATT 689 Query 678 TCACAAACCGCTTA-AGAAGCTCGGGATCTCACTTTTCAAA-AAGGAGATAATG-AGTGT 734 ||| || ||||| | ||||| | |||||||| ||||| ||| ||| |||| ||| | ||| Sbjct 690 TCATAAGCCGCT-AGAGAAGGTGGGGATCTCTCTTTT-AAAGAAGCAGATTATGGA-TGT 746 Query 735 TTCCCGCAAGTTCGATGAGCTACTAGAGAAGATTCTTGTGGAAC-ACGAAGAGAAAA-TG 792 ||| | || || || ||| | ||||| || ||||||||| || |||| | ||||| || Sbjct 747 TTCACATAAATTTGAGGAGTTGCTAGAAAATATTCTTGTG-AAGTACGAGG-GAAAAATG 804 Query 793 GAGGAGCATCATCAAGGTACTGATATG-ATGGATGTGTTGTTGGAAGCTTATCGAGACGA 851 | || ||||| ||| |||||| || ||||||| || |||| |||||||| |||||| Sbjct 805 AACGACCATCA--AAG-TACTGA-ATTCATGGATGCATTATTGGCAGCTTATCAAGACGA 860 Query 852 AAACGCTGAGTATAAGATCACAAGAAACCATATCAAGTCAATGTTTGTGGATCTTTTCAT 911 |||||| |||||||||||||| || |||||||||||| || | || | ||| || ||| | Sbjct 861 AAACGCAGAGTATAAGATCACTAGGAACCATATCAAGGCATTATTAGCGGAGCTATTCTT 920 Query 912 TG---CTGGT-ACTGATACATCATCAACCACTATACAATGGATCA-TGGCG-GAGATCAT 965 || | ||| | | | | || ||||| || | | |||| || ||| | || ||| | Sbjct 921 TGGAGCCGGTGAGTCCT-CTTCTTCAACAAC-A--CGATGGG-CAATGG-GAGAAATC-T 973 Query 966 T-AACCATCCC-AAGATTCTT-GAGAGGCTAAGAGAAGAAATCGATTTTGTTGTAGGGAA 1022 | ||| | ||| ||||| ||| ||||| | ||||||||||| ||||| || || ||||| Sbjct 974 TCAACAA-CCCTAAGAT-CTTTGAGAGATTGAGAGAAGAAATAGATTTAGTGGT-GGGAA 1030 Query 1023 A-ACAAGGTTGATTCAAGAAACTGACCTACCGAACCT-CCTTTACTTGCAAGC-GATAAT 1079 | ||||||||||||||||||| ||| ||||| || || || | |||||||||| | | | Sbjct 1031 ATACAAGGTTGATTCAAGAAAGTGATCTACCAAAACTTCCAT-ACTTGCAAGCAG-TCGT 1088 Query 1080 CAAAGAAGGGCTAAGATTGCATCCGCCGGG-GCCACTCTTACCAAGA-ACGGTCCAAGAA 1137 ||||||| ||||||||||| ||| ||| || |||| |||||| | | || || Sbjct 1089 CAAAGAATCTCTAAGATTGCACCCGGTGGGAGCGG-TCTTGCCAAGAGAATTTACAC-AA 1146 Query 1138 AGGT-GTGAA-ATTAAAGGGTTCCACATACCA-GAGAAGA-CTAT-ACTTGTTGTCAATT 1192 | | || || ||| ||||||| | |||| | ||| || | || |||||| ||||| Sbjct 1147 -GATTGT-AACATTGGAGGGTTCTATATAC-ATGAGG-GAAC-ATCACTTGTCATCAATG 1201 Query 1193 CTTATGCTATAATGAGAGATCCTGATTTTTGGGAAGATCCTGACGAGTTTAAGCCAGAGA 1252 ||||| |||||||||||||||||||| |||||||||||||| | |||||||| ||||||| Sbjct 1202 CTTATTCTATAATGAGAGATCCTGATATTTGGGAAGATCCTAATGAGTTTAAACCAGAGA 1261 Query 1253 GATTTTTATCTATTTCAAGATCAGGGCAAGAGGACGAGATAAGAGAT-AAATTCCTAAAA 1311 | ||| || ||| |||||||||||| |||||||| |||| || ||| ||| | |||| Sbjct 1262 GGTTTCTAACTACTTCAAGATCAGGACAAGAGGAAGAGAAAAAAGAGCAAACAC-TAAAG 1320 Query 1312 TACATTCCTTTTGCCAGCGGCA-GGAGAGGTTGTCCAGGAACAAATCTAGCTTATGC-TT 1369 | | | ||||||| | |||| | ||||||| ||||| ||| |||||| | |||| | || Sbjct 1321 TTCCTCCCTTTTGGC-GCGGGAAGGAGAGGATGTCCTGGATTAAATCTTGGTTATACCTT 1379 Query 1370 CTGTAGGAACCGCGGTTGGAGTGATGGTGCAATGCTTTGATTGGAAAATTGAAGGAGAGA 1429 |||| |||| | ||||||||||||||||||||||||| ||| | || |||||||| | Sbjct 1380 A-GTAGAAACCACAATTGGAGTGATGGTGCAATGCTTTGACTGGGAGATCGAAGGAGATA 1438 Query 1430 ATGTCAACATG-AATGA-GGCTGCTGGAACAA--TGGTG-TTG-ACCATGGCTCA-CCCT 1482 | ||||||||| || || || | | ||| || | | ||| | ||||||| ||| Sbjct 1439 AAGTCAACATGGAA-GAAGGTT-CAGGATTAAGATTTTTCTTGGATT-TGGCTCATCCC- 1494 Query 1483 CTTAAGTGCACTCCTGTTCCTCGAACCCTAAA 1514 |||||||||||||||||| |||||| | |||| Sbjct 1495 CTTAAGTGCACTCCTGTTGCTCGAATCATAAA 1526 > Ahg933050 jgi|Araly1|933050|scaffold_401038.1 Length=373 Score = 276 bits (149), Expect = 4e-73 Identities = 285/349 (82%), Gaps = 16/349 (5%) Strand=Plus/Plus Query 1181 TTGTTGTCAATTCTTATGCTATAATGAGAGATCCTGATTTTTGGGAAGATCCTGACGAGT 1240 ||||| | ||| |||||||||||||||||||||| || |||||||||||| |||| Sbjct 1 TTGTTATTAATGGTTATGCTATAATGAGAGATCCTAATAACTGGGAAGATCCTCTGGAGT 60 Query 1241 TTAAGCCAGAGAGATTT-TT-ATCTATTTCAAGATCAGGGCAAGAGGACGAGATAAGAGA 1298 |||| || ||||| ||| || || | |||||||||| | ||| |||||| ||||| ||| Sbjct 61 TTAAACCCGAGAGGTTTCTTGAT-T-CTTCAAGATCAAGCCAAAAGGACGCGATAAAAGA 118 Query 1299 TA-AATTCCTAAAATACATTCCTTTTGCCAGCGGCAGGAGAGGTTGTCCAGGAACAAATC 1357 | || |||||| ||||||| |||| | || || |||||||| ||||| ||| |||||| Sbjct 119 -AGAAGTCCTAAGATACATTGCTTTCGGGAGTGGAAGGAGAGGCTGTCCTGGAGCAAATC 177 Query 1358 TAGCTTATGCT-TCTGTAGGAACCGCGGTTGGAGTGATGGTGCAATGCTTTGATTGGAAA 1416 |||||||| || ||||||| ||| || ||||||||||||||||||||||||||||||| Sbjct 178 TAGCTTAT-CTCTCTGTAGAAACTGCTATTGGAGTGATGGTGCAATGCTTTGATTGGAAG 236 Query 1417 ATTGAAGGAGAGAATG-TCAACATGAATGAGGCTGCTGGAACAATGG-TGTTGACCATGG 1474 || ||||||| || | |||||||||||||||||||||||| ||| | || ||||||| Sbjct 237 ATCAAAGGAGATAA-GATCAACATGAATGAGGCTGCTGGAAAAATAACTATT-ACCATGG 294 Query 1475 CTCAC-CCTCTTAAGTGCACTCCTGTTCCTCGAACCCTAAACCT-TTTA 1521 | || ||||||| ||||| || |||||||||||||| ||| || |||| Sbjct 295 C-CAATCCTCTTACGTGCAGTCTTGTTCCTCGAACCC-AAATCTCTTTA 341 > Ahg930044 jgi|Araly1|930044|scaffold_302501.1 Length=944 Score = 167 bits (90), Expect = 3e-40 Identities = 201/254 (79%), Gaps = 10/254 (4%) Strand=Plus/Plus Query 14 TCATCTTCATCCTCTTATGTCTCTTGTCATTCCTATGTTACTCTCTCTTCTTCATGAAAC 73 |||| |||||| || | || ||||| ||| || | ||||||||| |||| |||| ||||| Sbjct 59 TCATATTCATCTTCCTGTGCCTCTTCTCAATCGTCTGTTACTCTATCTTTTTCAAGAAAC 118 Query 74 CTAAA-GATTCACGAGATGGCCGTGACCTTCCTCCGAGCCCTCCTTCTCTTCCAATCATC 132 | ||| || |||| || ||| || | || ||||| |||||||| ||||||||||||||| Sbjct 119 C-AAAGGACTCAC--GA-GGCTGTAATCTACCTCCCAGCCCTCCGTCTCTTCCAATCATC 174 Query 133 GGTCATCTTCACCTAATTCTTCTGTCTACTTTAACCCACAAGTCTTTTCAGAGACTCTCA 192 |||||||||||||| | || || ||| || || ||||||||||||| |||| | |||| Sbjct 175 GGTCATCTTCACCT--T-CTCCTCTCTTCTCTATCCCACAAGTCTTTACAGAAAATCTCC 231 Query 193 TCAAAGTATGGGCCTCTTCTCCATCTCCGCATCTTCCACGTACCTAT-AGTCCTCGCCTC 251 || |||||||| || || ||||||||||| || || |||| || || | |||| | || Sbjct 232 TCTAAGTATGGACCCCTCCTCCATCTCCGGATTTTTAACGTCCCCATCA-TCCTTGTTTC 290 Query 252 CTCAGCCTCAGTGG 265 || |||||||||| Sbjct 291 GTCTGCCTCAGTGG 304 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 58468526075 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5