BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G15500.1
Length=1585
Score E
Sequences producing significant alignments: (Bits) Value
Ahg493340 jgi|Araly1|493340|fgenesh2_kg.7__2773__AT4G15500.1 1984 0.0
Ahg493341 jgi|Araly1|493341|fgenesh2_kg.7__2774__AT4G15490.1 1103 0.0
Ahg946766 jgi|Araly1|946766|scaffold_702995.1 575 4e-163
> Ahg493340 jgi|Araly1|493340|fgenesh2_kg.7__2773__AT4G15500.1
Length=1428
Score = 1984 bits (1074), Expect = 0.0
Identities = 1310/1424 (92%), Gaps = 16/1424 (1%)
Strand=Plus/Plus
Query 51 ATGGAGATGGAATCGTCGTTACCTCATGTGATGCTCGTATCATTCCCAGGGCAAGGTCAC 110
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 1 ATGGAGATGGAATCGTCGTTAACTCATGTGATGCTCGTATCATTCCCAGGCCAAGGTCAC 60
Query 111 ATAAGCCCTCTTCTTCGTCTCGGAAAGA-TCATTGCCTCTAAAGGCTTAATCGTCACCTT 169
||| ||||||||||||||||||||| | |||| ||||||||||| ||||||||||||||
Sbjct 61 GTAAACCCTCTTCTTCGTCTCGGAAA-ACTCATAGCCTCTAAAGGTTTAATCGTCACCTT 119
Query 170 TGTAACCACAGAGGAACCATTGGGCAAGAAGATGCGTCAAGCCAACAATATTCAAGACGG 229
||| ||||||||||| ||||| |||||||||||||||||||| || || |||||||||||
Sbjct 120 TGTCACCACAGAGGAGCCATTAGGCAAGAAGATGCGTCAAGCAAATAAGATTCAAGACGG 179
Query 230 TGTGCTCAAACCGGTCGGGCTAGGTTTTCTCCGGTTCGAGTTCTTCGAGGATGGATTTGT 289
|||||||||||||||||| |||||||| ||||||||||| |||||||| |||||||||||
Sbjct 180 TGTGCTCAAACCGGTCGGTCTAGGTTTCCTCCGGTTCGAATTCTTCGAAGATGGATTTGT 239
Query 290 CTACAAAGAAGACTTTGATTTGTTACAAAAATCACTTGAAGTTTCCGGAAAACGAGAGAT 349
||||||||| | | |||||||||| | |||||||||||||||||||||||||||||||||
Sbjct 240 CTACAAAGACGCCGTTGATTTGTTCCTAAAATCACTTGAAGTTTCCGGAAAACGAGAGAT 299
Query 350 CAAGAATCTTGTCAAGAAATATGAGAAGCAACCAGTG-AGATGTCTCATAAATAATGCCT 408
||||||||||||||||||||||||| ||||||||||| || ||||||||||| || || |
Sbjct 300 CAAGAATCTTGTCAAGAAATATGAGCAGCAACCAGTGAAG-TGTCTCATAAACAACGCTT 358
Query 409 TTGTTCCATGGGTTTGTGACATAGCCGAGGAGCTTCAAATCCCATCAGCTGTTCTTTGGG 468
|||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 359 TTGTCCCATGGGTGTGTGACGTAGCCGAGGAGCTTCAAATCCCATCAGCTGTTCTTTGGG 418
Query 469 TCCAGTCTTGTGCTTGCCTCGCCGCTTATTACTATTACCACCACCAGTTAGTTAAGTTTC 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 419 TCCAGTCTTGTGCTTGCCTCGCCGCTTATTACTATTACCACCACCAGTTAGTTAAGTTTC 478
Query 529 CGACCGAAACCGAGCCGGAAATAACCGTTGACGTCCCTTTCAAGCCATTAAC-ATTGAAG 587
|||| ||||| |||||||| || || |||||| ||||||||||||||||| || ||||
Sbjct 479 CGACAGAAACTGAGCCGGAGATCACAGTTGACTTCCCTTTCAAGCCATTAGTGAT-GAAG 537
Query 588 CATGACGAGATCCCTAGCTTTCTTCACCCTTCCTCTCCGCTGTCCTCTATAGGAGGTACC 647
||||||||||||||||||||||||||||||||||||||| | |||||| | ||||||| |
Sbjct 538 CATGACGAGATCCCTAGCTTTCTTCACCCTTCCTCTCCGTTTTCCTCTGTGGGAGGTATC 597
Query 648 ATTTTAGAGCAGATCAAGCGACTTCACAAGCCTTTCTCTGTTCTCATCGAAACTTTTCAA 707
|||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct 598 ATTTTAGAACAGATCAAGCGACTTCACAAGCCTTTCTTTGTTCTCATCGACACTTTTCAA 657
Query 708 GAACTTGAAAAAGATACCATTGACCACATGTCCCAGCTCTGCCCTCAAGTCAAC-TTCAA 766
|| || |||||||||||||||||||| |||||||||||||||||||| |||| | || ||
Sbjct 658 GAGCTGGAAAAAGATACCATTGACCATATGTCCCAGCTCTGCCCTCATGTCATCCTT-AA 716
Query 767 CCCCATCGGTCCGCTTTTTACTATGGCTAAAACCATAAGGTCTGACATCAAGGGAGACAT 826
||| ||||||||||||||||| ||||||||||||||||| ||||| || |||||||| ||
Sbjct 717 CCCTATCGGTCCGCTTTTTACGATGGCTAAAACCATAAGCTCTGATATTAAGGGAGATAT 776
Query 827 CTCCAAGCCAGATAGTGACTGCATAGAGTGGCTTGACTCGAGAGAACCATCCTCCGTTGT 886
|||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 777 CTCCGAGCCAGCGAGTGACTGCATAGAGTGGCTTGACTCGAGAGAACCATCCTCTGTTGT 836
Query 887 TTACATCTCTTTTGGGACTTTGGCTTT-CTTGAAGCAAAACCAGATCGACGAGATTGCTC 945
|||| |||||||||||||| ||| ||| |||||||||| | |||||||| ||||||||||
Sbjct 837 TTACGTCTCTTTTGGGACTATGG-TTTACTTGAAGCAAGAGCAGATCGATGAGATTGCTC 895
Query 946 ACGGCATTCTCAACTCCGGGTTGTCCTGCTTATGGGTT-TTGCGGCCTCCCTTAGAAGGC 1004
| |||||||||||||||||||||||||||||||||||| || |||||||||||| ||||
Sbjct 896 ATGGCATTCTCAACTCCGGGTTGTCCTGCTTATGGGTTGTT-CGGCCTCCCTTACAAGGG 954
Query 1005 TTAG-CCATAGAACCGCATGTCTTGCCTCTAGAGCTTGAAGAGAAAGGGAAGATTGTGGA 1063
|| | ||| |||||| || ||||||||||||||||||||||||||||| ||||| || ||
Sbjct 955 TTTGACCA-AGAACCACAAGTCTTGCCTCTAGAGCTTGAAGAGAAAGGAAAGATCGTAGA 1013
Query 1064 ATGGTGTCAACAAGAGAAAGTTTTGGCTCATCCTGCGGTTGCTTGCTTCTTAAGTCACTG 1123
|||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 1014 ATGGTGTCCACAAGAGAAAGTGTTGGCCCATCCTGCGGTTGCTTGCTTCTTAAGTCACTG 1073
Query 1124 TGGATGGAACTCAACCATGGAGGCTTTAACTTCAGGAGTTCCCGTTATTTGTTTCCCGCA 1183
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 1074 CGGATGGAACTCAACCATGGAGGCATTAACTTCAGGAGTTCCCGTGATTTGTTTCCCGCA 1133
Query 1184 GTGGGGAGATCAGGTGACAAATGCGGTGTACATGATTGATGTTTTCAAGACAGGATTGAG 1243
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1134 GTGGGGAGATCAGGTGACAAATGCGGTGTACATGATTGATGTTTTCAAGACAGGAATGAG 1193
Query 1244 ACTCAGCCGTGGAGCTTCCGATGA-GAGGATTGTTCCAAGGGAGGAGGTTGCTGAGCGAC 1302
||| ||||| |||| | || || |||||||||||| ||||||||||||||||||||||
Sbjct 1194 ACTTAGCCGCGGAGAGGCTGA-GAAGAGGATTGTTCCGAGGGAGGAGGTTGCTGAGCGAC 1252
Query 1303 TGCTTGAGGCCACCGTTGGAGAGAAGGCGGTGGAGCTGAGAGAAAACGCTCGGAGGTGGA 1362
|||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1253 TGCTTGAGTCCACCGTTGGAGAGAAGGCGGCGGAGCTGAGAGAAAACGCTCGGAGGTGGA 1312
Query 1363 AGGAGGAGGCGGAGTCTGCCGTGGCTTACGGTGGAACATCGGAAAGGAATTTTCAAGAGT 1422
|||||||||||||| ||||||| || ||||||||| |||| || ||||| ||||||||||
Sbjct 1313 AGGAGGAGGCGGAGACTGCCGTAGCGTACGGTGGATCATCTGAGAGGAACTTTCAAGAGT 1372
Query 1423 TTGTTGACAAGTTGGTTGATGTCAAGACAATGACAAACATTAAT 1466
|||||||||||||||||||||| ||||||||| |||||||||||
Sbjct 1373 TTGTTGACAAGTTGGTTGATGTTAAGACAATGCCAAACATTAAT 1416
> Ahg493341 jgi|Araly1|493341|fgenesh2_kg.7__2774__AT4G15490.1
Length=1730
Score = 1103 bits (597), Expect = 0.0
Identities = 1141/1400 (82%), Gaps = 51/1400 (4%)
Strand=Plus/Plus
Query 73 CTCATGTGATGCTCGTATCATTCCCAGGGCAAGGTCACATAAGCCCTCTTCTTCGTCTCG 132
||||||||||||||||||| |||||||| ||||||||| ||| |||||||||||||||||
Sbjct 237 CTCATGTGATGCTCGTATCTTTCCCAGGCCAAGGTCACGTAAACCCTCTTCTTCGTCTCG 296
Query 133 GAAAGATCATTGCCTCTAAAGGCTTAATCGTCACCTTTGTAACCACAGAGGAACCATTGG 192
||||| |||| ||||||||||||||| ||||||||||||| ||||||||| | |||| ||
Sbjct 297 GAAAGCTCATAGCCTCTAAAGGCTTACTCGTCACCTTTGTCACCACAGAGCAGCCATGGG 356
Query 193 GCAAGAAGATGCGTCAAGCCAACAATATTCAAGACGGTGTGCTCAAACCGGTCGGGCTAG 252
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 357 GCAAGAAGATGCGTCAAGCCAACAAGATTCAAGACGGTGTGCTCAAACCGGTCGGTCTAG 416
Query 253 GTTTTCTCCGGTTCGAGTTC-T-TC-GA-GG-ATGGAT-TTGTCTAC-AAAGAAGACTTT 305
|||| ||||||||||||||| | || || || | | | | | || ||| |||| ||
Sbjct 417 GTTTCCTCCGGTTCGAGTTCTTCTCTGACGGTTTAGCTGACGACGACGAAAAAAGA-TTC 475
Query 306 GA-TT---T--GTTACAAAAATCA-CTTGAAG-TTTCCGGAAAACGAGAGATCAAGAATC 357
|| || | || | | | || ||||||| | | ||||||| ||||||||||||||
Sbjct 476 GACTTCAATACCTTCCGACCA-CACCTTGAAGCTGT-AGGAAAACAAGAGATCAAGAATC 533
Query 358 TTGTCAAGAAATATGAGAAGCAACCAGTGA-GATGTCTCATAAATAATGCCTTTGTTCCA 416
| || ||| |||| | ||| |||| |||| | ||||| ||||| ||||| ||||| |||
Sbjct 534 TCGTTAAGCGATATAACAAGGAACCGGTGACG-TGTCTTATAAACAATGCTTTTGTCCCA 592
Query 417 TGGGTTTGTGACATAGCCGAGGAGCTTCAAATCCCATCAGCTGTTCTTTGGGTCCAGTCT 476
||||| ||||| | |||||||||||||| ||||| || |||||||| ||||||||||||
Sbjct 593 TGGGTATGTGATGTGGCCGAGGAGCTTCACATCCCTTCGGCTGTTCTATGGGTCCAGTCT 652
Query 477 TGTGCTTGCCTCGCCGCTTATTACTATTACCACCACCAGTTAGTTAAGTTTCCGACCGAA 536
|| ||||| ||| | |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 653 TGCGCTTGTCTCACGGCTTATTACTATTACCACCACCGGTTAGTTAAGTTTCCGACCGAA 712
Query 537 ACCGAGCCGGAAAT-AACCGTTGACGTCCCTTTCAAGCCATTAACATTGAAGCATGACGA 595
||||||||||| || ||| ||||| |||||| | |||||| || |||||||||||
Sbjct 713 ACCGAGCCGGACATTAAC-GTTGAAATCCCTTGCTTGCCATTG---TTAAAGCATGACGA 768
Query 596 GATCCCTAGCTTTCTTCACCCTTCCTCTCCGCTGTCCT-CTATAGGAG--GTACCATTTT 652
|||||| ||||||||||||||||| ||||| || | | || | |||| || | |||||
Sbjct 769 GATCCCAAGCTTTCTTCACCCTTCGTCTCC-CTTTACAGCTTTTGGAGAAGT-C-ATTTT 825
Query 653 AGAGCAGATCAAGCGACTT-----C-ACAAGCCTTTCTCTGTTCTCATCGAAACTTTTCA 706
||| ||| |||||||| | | |||||||||| | | || ||||||| |||||||
Sbjct 826 AGACCAGTTCAAGCGAATCGAAAACGACAAGCCTTTTTATATTTTCATCGACACTTTTCG 885
Query 707 AGAACTTGAAAAAGATACCATTGACCACATGTCCCAGCTCTGC-CCTCAAGTCAACTTCA 765
||||| |||||||| | ||| ||||||||||| ||||| | | ||||||| || | |||
Sbjct 886 CGAACTAGAAAAAGACATCATCGACCACATGTCACAGCTTT-CTCCTCAAGCCATCATCA 944
Query 766 ACCCCATCGGTCCGCTTTTTACTATGGCTAAAACCATAAGGTCTGACATCAAGGGAGACA 825
|| ||||||||||||| | |||||| ||||||| || || ||| | |||||||| |
Sbjct 945 GTCCTGTCGGTCCGCTTTTCAAGATGGCTCAAACCATGAGCTCCGACGTTAAGGGAGATA 1004
Query 826 TCTCCAAGCCAGATAGTGACTGCATAGAGTGGCTTGACTCGAGAGAACCATCCTCCGTTG 885
|||| |||||| ||||||||||| |||||||||||||| |||||||||||||| || |
Sbjct 1005 TCTCTGAGCCAGCGAGTGACTGCATGGAGTGGCTTGACTCAAGAGAACCATCCTCAGTCG 1064
Query 886 TTTACATCTCTTTTGGGACTTTGGCTTTCTTGAAGCAAAACCAGATCGACGAGATTGCTC 945
|||||||||| ||||||||| | || | |||||||| | ||||| || ||||| ||||
Sbjct 1065 TTTACATCTCCTTTGGGACTATAGCCAACGTGAAGCAAGAGCAGATGGAGGAGATCGCTC 1124
Query 946 ACGGCATTCTCAACTCCGGGTTGTCCTGCTTATGGGTT-TTGCGGCCTCCCTTAGAAGGC 1004
| ||| || | | ||| || ||||| | ||| |||||| || ||||| ||| | || ||
Sbjct 1125 ATGGCGTTTTGAGCTCTGGCTTGTCGTTCTTGTGGGTTGTT-CGGCCACCCATGGAGGGG 1183
Query 1005 TTAGCCA-TAGAACCGCATGTCTTGCCTCTAGAGCTTGAAGAGAAAGGG-AAGATTGTGG 1062
| | | ||||||| ||||| ||||||| ||| | ||||| |||||| || || ||||
Sbjct 1184 TCA-CTTGTAGAACCACATGTTTTGCCTCGCGAGATCGAAGA-AAAGGGTAAAATCGTGG 1241
Query 1063 AATGGTGTCAACAAGAGAAAGTTTTGGCTCATCCTGCGGTTGCTTGCTTCTTAAGTCACT 1122
||||||||| |||||||| ||| |||| ||||||||| ||||||| || ||||||||||
Sbjct 1242 AATGGTGTCCACAAGAGAGAGTCTTGGTTCATCCTGCAATTGCTTGTTTTTTAAGTCACT 1301
Query 1123 GTGGATGGAACTCAACCATGGAGGCTTTAACTTCAGGAGTTCCCGTTATTTGTTTCCCGC 1182
| ||||||||||| || |||||||||||||| || || || |||||| ||||||| ||||
Sbjct 1302 GCGGATGGAACTCGACAATGGAGGCTTTAACGTCTGGTGTCCCCGTTGTTTGTTTTCCGC 1361
Query 1183 AGTGGGGAGATCAGGTGACAAATGCGGTGTACATGATTGATGTTTTCAAGACAGGATTGA 1242
| ||||||||||| ||||| ||||||| ||| || |||||||||||||||||||| |||
Sbjct 1362 AATGGGGAGATCAAGTGACGGATGCGGTTTACTTGGTTGATGTTTTCAAGACAGGAGTGA 1421
Query 1243 GACTCAG-CCGTGGAGCTTCCGATGAGAGGATTGTTCCAAGGGAGG-AG-GTTGCTGAGC 1299
|||| || ||| |||| | || ||| ||||||| | ||||| | || | || ||
Sbjct 1422 GACT-AGGCCGCGGAGAAGCTGAAAAGAAGATTGTTTCGAGGGAAGTAGTGGTGGAGAA- 1479
Query 1300 GACTGCTTGAGGCCACCGTTGGAGAGAAGGCGGTGGAGCTGAGAGAAAACGCTCGGAGGT 1359
| |||||||||||||| ||||| || |||||||||||||| |||||||||||||||||||
Sbjct 1480 G-CTGCTTGAGGCCACGGTTGGGGAAAAGGCGGTGGAGCTAAGAGAAAACGCTCGGAGGT 1538
Query 1360 GGAAGGAGGAGGCGGAGTCTGCCGTGGCTTACGGTGGAACATCGGAAAGGAATTTTCAAG 1419
|||||| ||| |||||| | || ||||| |||||||| |||| || ||||| ||| |||
Sbjct 1539 GGAAGGCGGAAGCGGAGGCCGCGGTGGCGGACGGTGGATCATCTGATAGGAACTTTAAAG 1598
Query 1420 AGTTTGTTGACAAGTTGGTT 1439
||||||| ||||||||||||
Sbjct 1599 AGTTTGTGGACAAGTTGGTT 1618
> Ahg946766 jgi|Araly1|946766|scaffold_702995.1
Length=1177
Score = 575 bits (311), Expect = 4e-163
Identities = 647/804 (80%), Gaps = 43/804 (5%)
Strand=Plus/Plus
Query 72 CCTCATGTGATGCTCGTATCATT-CCCAGGGCAAGGTCACATAAGCCCTCTTCTTCGTCT 130
|||||||| ||||||||||| || |||||| |||||||||||||||||||||||||||||
Sbjct 39 CCTCATGTAATGCTCGTATC-TTACCCAGGCCAAGGTCACATAAGCCCTCTTCTTCGTCT 97
Query 131 CGGAAAGATCATTGCCTCTAAAGGCTTAATCGTCACCTTTGTAACCACAGAGGAACCATT 190
||||| | | || ||||||||||||||||||||||||||||| ||||||||| | ||||
Sbjct 98 CGGAACGCTTATAGCCTCTAAAGGCTTAATCGTCACCTTTGTTACCACAGAGCAGCCATG 157
Query 191 GGGCAAGAAGATGCGTCAAGCCAACAATATTCAAGACGGTGTGCTCAAACCGGTCGGGCT 250
|||||| |||||||||||||||||||| |||||||| || ||||||||||| ||||| ||
Sbjct 158 GGGCAAAAAGATGCGTCAAGCCAACAAGATTCAAGAAGGCGTGCTCAAACCCGTCGGTCT 217
Query 251 AGGTTTTCTCCGGTTCGAGTTCTTCGAGGATGGATT---TG-T--CTAC-AAA---GAA- 299
|||||| |||||||||||||||||| || || || || | | || ||| |||
Sbjct 218 AGGTTTCCTCCGGTTCGAGTTCTTCTCTGACGGCTTAACTGATGACGACGAAAAAAGAAC 277
Query 300 -GACTTTGATTTGTTACAA--AAATCACTTGAAGTT-TCCGGAAAACGAGAGATCAAGAA 355
||||| || || | | ||| || |||||| | || ||||||| ||||||||| ||
Sbjct 278 CGACTTCAATGCCTTCCGACCAAA-CA-TTGAAGCTGTC-GGAAAACAAGAGATCAAAAA 334
Query 356 TCTTGTCAAGAAATATGAGAAGCAACCAGTGAGATGTCTCATAAATAATGCCTT-TGTTC 414
||| || |||| |||| | ||| || | |||| |||||| ||||| || || || ||| |
Sbjct 335 TCTCGTTAAGAGATATAACAAGGAATCGGTGACATGTCTTATAAACAACGC-TTATGTGC 393
Query 415 CATGGGTTTGTGACATAGCCGAGGAGCTTCAAATCCCATCAGCTGTTCTTTGGGTCCAGT 474
| ||||| |||||| | ||||||||||||||||| || || |||||||| ||||||||||
Sbjct 394 CGTGGGTATGTGACGTGGCCGAGGAGCTTCAAATTCCTTCTGCTGTTCTATGGGTCCAGT 453
Query 475 CTTGTGCTTGCCTCGCCGCTTATTACTATTACCACCACCAGTTAGTTAAGTTTCCGACCG 534
|||| ||||| ||| | |||||||| |||||||||||| |||||||||||||||||||
Sbjct 454 CTTGCGCTTGTCTCTCTGCTTATTATTATTACCACCACGGGTTAGTTAAGTTTCCGACCA 513
Query 535 AAACCGAGCCGGAAATA-ACCGTTGACGTCCCTTTCAAGCCATTAACATTGAAGCATGAC 593
||||||||||||| || || ||||| |||||| | ||||||| || |||||||||
Sbjct 514 AAACCGAGCCGGACATCGAC-GTTGAAATCCCTTGCTTGCCATTA---TTAAAGCATGAC 569
Query 594 GAGATCCCTAGCTTTCTTCACCCTTCCTCTCCGCTGTCCTC-TATA-GGAG--GTACCAT 649
|||||||| || ||||||||| |||| ||||| | | | | | || |||| || | ||
Sbjct 570 GAGATCCCAAGTTTTCTTCACACTTCGTCTCCT-TATACACCT-TACGGAGAAGT-C-AT 625
Query 650 TTTAGAGCAGAT-CAAGCGACTT-----C-ACAAGCCTTTCTCTGTTCTCATCGAAACTT 702
|||||| || || ||||||||| | |||||||||||| | || ||||||| ||||
Sbjct 626 TTTAGACCA-ATTCAAGCGACTCGAAAACGACAAGCCTTTCTATCTTTTCATCGACACTT 684
Query 703 TTCAAGAACTTGAAAAAGATACCATTGACCACATGTCCCAGCTCTGCCCTCAAGTCAACT 762
| | ||||| |||||||||| ||| ||||||||||| | || || ||||||| || |
Sbjct 685 TCCGCGAACTAGAAAAAGATATCATCGACCACATGTCAAACCTTTGTCCTCAAGCCATCA 744
Query 763 TCAACCCCATCGGTCCGCTTTTTACTATGGCTAAAACCATAAGGTCTGACATCAAGGGAG 822
||| ||| |||||||||| || | |||||| |||||||||| |||||| | || ||||
Sbjct 745 TCAGCCCTGTCGGTCCGCTCTTCAAGATGGCTGAAACCATAAGCTCTGACGTTAAAGGAG 804
Query 823 ACATCTCCAAGCCAGATAGTGACT 846
| |||||| |||||| |||||||
Sbjct 805 ATATCTCCGAGCCAGCGAGTGACT 828
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59382691955
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5