BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G15730.1
Length=3952
Score E
Sequences producing significant alignments: (Bits) Value
Ahg493314 jgi|Araly1|493314|fgenesh2_kg.7__2747__AT4G15730.1 2739 0.0
> Ahg493314 jgi|Araly1|493314|fgenesh2_kg.7__2747__AT4G15730.1
Length=3814
Score = 2739 bits (1483), Expect = 0.0
Identities = 1752/1879 (93%), Gaps = 30/1879 (2%)
Strand=Plus/Plus
Query 2048 AAAAACATGAAGCTGCCAGGAGAAACACCTACTGCTACTCAGATATCTGCAGACC----T 2103
|||||||||||||||||||||||||||| || ||||||||||| || |||||| |
Sbjct 1939 AAAAACATGAAGCTGCCAGGAGAAACACTTAAGGCTACTCAGATGTCCACAGACCTTGGT 1998
Query 2104 -T-TCGCACGAtttttttCAGGATAAGATTGACCAGAAAGCAAAGAGGAGAGCAGCAGGT 2161
| |||||||||||| ||||||||||||||||||||||||||||| || |||||||||||
Sbjct 1999 GTGTCGCACGATTTTGTTCAGGATAAGATTGACCAGAAAGCAAAGTGGCGAGCAGCAGGT 2058
Query 2162 GCTGGTTGTCAGATAAAGGTCAAGAAGAAAAAGGAGGCTGACAAAGAAGAAAGTGATGGT 2221
||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 2059 ACTGGTTGTCAGATAAAGATCAAGAAGAAAAAGGAGGCTGACAAAAAAGAAAGTGATGGT 2118
Query 2222 TCCAAGCATATCAAGACTGGTGATGGTAACAAACTTGCCAGAGTTATTAAAGCAGAAGAA 2281
|||||||||||||||||||||||||||| |||||| ||||||| | ||||||||||||||
Sbjct 2119 TCCAAGCATATCAAGACTGGTGATGGTACCAAACTCGCCAGAGGTGTTAAAGCAGAAGAA 2178
Query 2282 ATACATTGGAATCAAGATCCTAAATGGACTCCAGCAGAGAGAAAAAGAAAACGTCATGAC 2341
|||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct 2179 ATACATTGGAATCAAGATCCGGAATGGACTCCAGCAGAGAGAAAAACAAAACGTCATGAC 2238
Query 2342 AATGATTTTTGCACTTTGAATGTAGAGCGAGACCCAAAGAAAAGATTACTCGTATCTAAA 2401
|||||||||| ||||||| |||||||||||||| |||||||||||||||||| |||||||
Sbjct 2239 AATGATTTTTACACTTTGGATGTAGAGCGAGACACAAAGAAAAGATTACTCGCATCTAAA 2298
Query 2402 AAGAAACCTGACCACAAACCTCAACTGATAACTGCTAGTGGTTCCTTGTGTACAAAAGCC 2461
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct 2299 AAGAAACCTGACCACAAACCTCAACTGACAACTGCTAGTGGTTCCTTGTGTACAAAATCT 2358
Query 2462 CAGGGAAATATCAATAGTACTGTGAGGAAAATAAGGTTGATGGGTTACAAGCAGGGTAAG 2521
|| ||||||||||||| | || ||||||||||||||||||||||| ||||||||||||||
Sbjct 2359 CATGGAAATATCAATAATCCTATGAGGAAAATAAGGTTGATGGGTAACAAGCAGGGTAAG 2418
Query 2522 GATGGGAAAAATTCAAAATTGTTTGCAGATGGTGAGGAAAACGAGCCCTCAATGGAAAAG 2581
|||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||| |
Sbjct 2419 GATGGGAACAATTCAAAATTGTTTGCGGATGGTGAGGAAAAAGAGCCCTCAATGGAAATG 2478
Query 2582 GCGGTAACAACTAAGATTTCAGTCCATGAATCTAAAGCAAACCAAAGAAATGAATTGTTT 2641
|||||||||||||||||| ||||||| |||||||||||| |||||| |||||||||||||
Sbjct 2479 GCGGTAACAACTAAGATTACAGTCCAGGAATCTAAAGCACACCAAAAAAATGAATTGTTT 2538
Query 2642 CAGGCTGA---T--T-GCTTTCAAGAACACCT-GAATGGTGATGCCTCATGTAGATATTT 2694
|||||||| | | ||| ||||||| || ||||| |||||||||||||||||| ||
Sbjct 2539 CAGGCTGATGGTGATGGCTCTCAAGAA-TTCTGGAATGCTGATGCCTCATGTAGATACTT 2597
Query 2695 CTCTGGTGGAAGTGGGCAGATTTCTGGGATAGAAACATCAAACTCGTCGAAGGTTTTAGG 2754
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct 2598 CTCTGGTGGAAGTGGGCAGATTTCTGGGGTAGAAACATCAAGCTCGTCGAAGGTTTTAGG 2657
Query 2755 ATCACATAAAAGTGGACGAATGTATGTGGAAGAAGTAAAAGCATCCCCTGTGGAATCAGT 2814
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2658 ATCACATAAAAGTGGAAGAATGTATGTGGAAGAAGTAAAAGCATCCCCTGTGGAATCAGT 2717
Query 2815 TTCCTCTTCCCCTGCAAGGTCTTCATG-CCC-C--A--------CGAATGATATACTTCA 2862
||||||||||||||||||||||||||| ||| | | ||||||||||||||||
Sbjct 2718 TTCCTCTTCCCCTGCAAGGTCTTCATGCCCCACAAATCTTGCTGCGAATGATATACTTCA 2777
Query 2863 AGAGGCTGAAAAGCTGAGAAAGCTTGCTGACTGTTTCAAGAGCTCTGGATTTGAATATGA 2922
||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |
Sbjct 2778 AGAGGCTGAAAAGCTGAGAAAGCGTGCTGACTGTTTCAAGAGCTCTGGATCTGAATATCA 2837
Query 2923 ATACAAGGAGATCAACTTTAAAGCGGCTCTGAGGTTTCTCCTTGGAGCTTCAGTTTTAGA 2982
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2838 ATACAAGGAGACCATCTTTAAAGCGGCTCTGAGGTTTCTCCTTGGAGCTTCAGTTTTAGA 2897
Query 2983 AATGTGCAGTACAGATAATGTGGAAGTGGGGAAGATGAGCCATATTGAGGCTTACCATAC 3042
|||| ||||||| |||| |||||||| ||||||||||||||||||||||||||||||| |
Sbjct 2898 AATGAGCAGTACTGATAGTGTGGAAGGGGGGAAGATGAGCCATATTGAGGCTTACCATTC 2957
Query 3043 TGCTGCAAAACTTTCAGAAAGTTGTGCCCATCAATATGAAACAAGCCAAGAAATGGCTGC 3102
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2958 TGCTGCAAAACTTTCAGAAAGCTGTGCCCATCAATATGAAACAAGCCAAGAAATGGCTGC 3017
Query 3103 AGCTACTTTGGCTTATAAATGCACAGAAGTGGCTTGCATGAGATTAGTGTATGGCAGAAG 3162
|||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3018 AGCTGCTTTGGCCTATAAGTGCACAGAAGTGGCTTGCATGAGATTAGTGTATGGCAGAAG 3077
Query 3163 TCTAGGTCTGAGTGGAGAATGGAATGAATTGCAAAAAATGGTACAGATGACTCCTCAAGG 3222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3078 TCTAGGTCTGAGTGGAGAATGGAATGAATTGCAAAAAATGGTACAGATGACTCCTCAAGG 3137
Query 3223 TGAATCACCGTCATCATCTGCATCTGATGTCGATAGTTTCAATCATCAAGGGGTGATTAA 3282
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||| || |
Sbjct 3138 TGAATCACCGTCATCATCCGCATCTGATGTCGATAGTCTCAATCATCAAGGGGTGGTTGA 3197
Query 3283 GAAGTCTGCTAAAACCAGAAGAGGTCTTTCCCATGTTGCCGGAAACCTTCTCCCTGTTGC 3342
|||||||||||||||| ||||||||||||||||||||| ||||| ||||| ||| ||||
Sbjct 3198 TAAGTCTGCTAAAACCAAAAGAGGTCTTTCCCATGTTGCTGGAAATCTTCTTCCTTTTGC 3257
Query 3343 TAGAAGCCAACTAAATTTTGTTCCGCTATTGGACTTTACAGG-GAGCATGAATCTGGCAA 3401
||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||
Sbjct 3258 TAGAAGCCAACTAAATTTTGTTCCGTTATTGGACTTTAC-GGAGAGCATGAATCTGGCAA 3316
Query 3402 TGGAGGCCTCAGCAAAATCCCAAAATGCTTTTAAAGCCGTCACTGACACCTCAGAAGAAA 3461
|||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct 3317 TGGAAGCCTCAGCAAAATCCCAAAATGCTTTTAAAGCAGTCACTGTCACCTCAGAAGAAA 3376
Query 3462 GAAAGCATGGAGACTGTATCTCTGCTATCAAAAAAGTTGTCGATTTTAGTTTCCATGATG 3521
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 3377 CAAAGCATGGAGACTGTATCTCTGCTATCAAGAAAGTTGTCGATTTTAGTTTCCATGATG 3436
Query 3522 TTGAAGCGCTTATAAAGATGATTGAGGTTGCCATGGATGCTCTAAGTTCATCAAGATTCG 3581
| ||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 3437 TGGAAGCACTTGTAAAGATGATTGAGGTTGCCATGGATGCTCTACGTTCATCAAGATTCG 3496
Query 3582 GTGGCCCAAAGTGTTGACTCTATTTTGTATATAGACCCTGGTCCTATAAAGAATAGAATA 3641
| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 3497 GCGGCCCAAAGTGTTGACTCTATTTTGTACATAGGTTCTGGTCCTATAAAGAATAGAATA 3556
Query 3642 GTGTTTCATGAACTTCCATAGAAAAATCTTAGTAAGTAGCATAGATTAGGAAAGGAAGAC 3701
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 3557 GTGTTTCATGAACTTCCATAGAAAAATCTTATTAATTAGCATAGATTAGGAAAGGAAGAC 3616
Query 3702 TTGGAGAGAGGACACTAGATAAGGTCTAAGTTTGCTA-TTTGCAGTAACTCTCAGGGTCC 3760
||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct 3617 TTGGAAAGAGGACACTAGATAAGGTCTAAGTTTGC-ACTTTGCAGTAACTCTCAGGGTCC 3675
Query 3761 TGTTTCAGGTCTTTCTTCTTTTTGGTGTCTGGGTATTCAATATTAACTAAAGCATATTTA 3820
||||||||||||||||||||||||||||| |||||||||| |||||| |||| |||||||
Sbjct 3676 TGTTTCAGGTCTTTCTTCTTTTTGGTGTCCGGGTATTCAAGATTAACAAAAGAATATTTA 3735
Query 3821 TAGAAGAGTAGGAGGATTCTTAGATATAGTCATTTAAAAGATCGGTTAGTGATAAGATTT 3880
||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 3736 TAGAAGAGTAGCAGGATTCTTAGATATAGTCATTTAAAAGATTGGTTAGTGATAAGAGTT 3795
Query 3881 CTGACAAGACACTGCTCTA 3899
||||||||||||||||||
Sbjct 3796 GTGACAAGACACTGCTCTA 3814
Score = 1463 bits (792), Expect = 0.0
Identities = 925/988 (94%), Gaps = 14/988 (1%)
Strand=Plus/Plus
Query 1 GTCTGCaaaaaaaaTCGGAGACGCAAAACCAACTTGCCGCCGAATCTTCCTTAAACCCTC 60
||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 1 GTCTGCAGAAAAATTCGGAGACGCAAAAGCAACTTGCCGCCGAATCTTCCTTAAA-CCTC 59
Query 61 AACGCTGCTCTTCGCCGCCGTTGAGACGATCACAGTGATCGAATCTTCCTTTTCAACTTT 120
|||| || ||||||||||| ||| ||||||||||||||||||||||||||| |||| |
Sbjct 60 GACGCCGCACTTCGCCGCCG-TGACTCGATCACAGTGATCGAATCTTCCTTTTAAACTAT 118
Query 121 CTCG-TCTTTTGATCAAACGAGTTTGGTTGAGTTTTTGATAAACGTGATTAAGCGATTAA 179
|||| || ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 119 CTCGTTC-TTTGATCAAACGAGTTTGGTTGAGTTTGTGATAAACGTGATTAAGCGATTGA 177
Query 180 TTTCGCG-TTTTAACAACAATCTAGATTGTCCTTTGGAGATTGAACAAATTTAGGG-TTT 237
||||||| |||||| ||||||| | ||||| |||||||||||||||||||||||| |||
Sbjct 178 TTTCGCGTTTTTAA-AACAATCAATATTGT-GTTTGGAGATTGAACAAATTTAGGGTTTT 235
Query 238 TTGGGGATAATCTAAGTGTTTATGATTTGAAACTTTGTGTGTTTTGAGATTGTTTTGGGC 297
||| ||||||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct 236 TTGAGGATAATCTAAGTGTTTATGATTTGAATCTTTGTGTGTTTTGAGA---TTCTGGGC 292
Query 298 AATGTTGGATTTTCGAGACGGTTTGGTGGCGGCAGAGTTAGTGAGTGTTGGGGTTTAGGA 357
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct 293 AATGTTGGATTTTCGAGACGGTTTGGTGGCGGCAGAGTTCGTGTGTGTTGGGGTTTAGGA 352
Query 358 AGTAGTAGTAGTTATTAGGGTTTGGAATTGGGTTATGTTTAGGG-TTTTACTAG-TTTAG 415
||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||| ||||
Sbjct 353 GGTAGTAGTAGTAATTAGGGTTTGGACTTGGGTTATGTTTAGGGTTTTTA-TAGTTTTAC 411
Query 416 AAGATGGGAGAGGATTATGAGCTTGAAGAAGGAGAGATGAATTGTTCTTCTGATGAAGCT 475
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 412 AAGATGGGAGAGGATTATGAACTTGAAGAAGGAGAGATGAATTGTTCTTCTGATGAAGCT 471
Query 476 GTTGTTGATCTTGACGTTGATCTCTCTTACATTGACAAGAAGGTACAGAATGTACTTGGC 535
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 472 GTTGTTGATCTTGACGTTGATCTCTCTTACATTGACAAGAAGGTGCAGAATGTACTTGGC 531
Query 536 CACTTGCAAAAAGGTTTCGGAGAGGAAGCCCGGGACCGGTTTGGTCCGGAGATCTTTGAC 595
||||||||||||| ||| ||||||| ||||| ||||| |||||||||| |||||| ||||
Sbjct 532 CACTTGCAAAAAGATTTTGGAGAGGGAGCCCTGGACCAGTTTGGTCCGAAGATCTGTGAC 591
Query 596 TATGGATCATTTTTGCCCACTTACAAACGTTTGCCGGCTGTACCATCATGTCAAAGGAGT 655
|||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||
Sbjct 592 TATGGATCATTTTTGCCCACATACAAACGTTCGGTGGCTGTACCATCATGTCAAAGGAGT 651
Query 656 TCTCTAGGGAATCATGCTGTACAAAGAATTTCCAACAGTTTACCCGGGAAGAATGTGGTT 715
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 652 TCCCTAGGGAATCATGCTGTACAAAGAATTTCCAACAGTTTACCCGGGAAGAATGTGGTT 711
Query 716 CAGAAGTTTCAGTCACCCCCTGCTACATCTTGTAAACTAGTAAGAAATCAGGATCCTCAG 775
|| ||||||||||||| |||||||||||||| | ||||||||||||||| ||||||||||
Sbjct 712 CAAAAGTTTCAGTCACTCCCTGCTACATCTTCTGAACTAGTAAGAAATCGGGATCCTCAG 771
Query 776 AACTATCAAACTTCAGGATCTCTTTTGGCTCAAGCTCCAGGAAAAGTTCCCATAAATAAA 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 772 AACTATCAAACTTCAGGATCTCTTTTGGCTCAAGCTCCAGGAAAAGTTCCCATAAATAAA 831
Query 836 GGAAATGCAAGAACACCAGCCAATGATTTGCCTCATAATAAGCCGATCAGAGTTCGGATC 895
|||||||||||||||||||| |||||||||||| || |||||||||| ||||||||||||
Sbjct 832 GGAAATGCAAGAACACCAGCAAATGATTTGCCTGATCATAAGCCGATTAGAGTTCGGATC 891
Query 896 AAAATGGGTTCTGAAATCTTGTCCCAAAGTGTCGCGATGGTTTGCAAGGATCTTGGTCTC 955
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 892 AAAATGGGTTCTGAAATCTTGTCCCAAAGTGTCACGATGGTTTGTAAGGATCTTGGTCTC 951
Query 956 GATGGTTCTCCAAATTCACCACCCCGAA 983
||||||||||||||||||||||||||||
Sbjct 952 GATGGTTCTCCAAATTCACCACCCCGAA 979
Score = 1406 bits (761), Expect = 0.0
Identities = 911/981 (93%), Gaps = 19/981 (2%)
Strand=Plus/Plus
Query 1017 ATACATCTCTAGGGAAGACAAGTGAATCTCCTTCCCGCATTCTTCAGGAAATGACTGCCA 1076
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 983 ATACATCTCTGGGGAAGACAAGTGAATCTCCTTCCCGCATTCTTCGGGAAATGACTGCCA 1042
Query 1077 TTTCTGTTCCAGAGGATCTACTGATGTCGCCTCTTCCTGATAGTCTGCTCCTAGTGAAGG 1136
||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 1043 TTTCTGTTCCAGAGGATCTACTGATGTCGCCTCTTCCTGATAGTCTGCTTCTTGTGAAGA 1102
Query 1137 ATAAGAAGAAGCAATATACTTTATTAGACAATCAACCTATGATTAAGACAGGAAAGAAAT 1196
||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 1103 ATAAGGAGAAGCGATATACTTTATTAGACAATCAACCTGTGATTAAGACAGGAAAGGAAC 1162
Query 1197 CTTCTATTCAGATACAGAACAAGTTCTCGGATGTTTTATGTTGTGAGAAAACTCCAATTG 1256
|||||||||||| |||||||||||| ||||||| ||| ||||||||||||||||||||||
Sbjct 1163 CTTCTATTCAGACACAGAACAAGTTTTCGGATGCTTTGTGTTGTGAGAAAACTCCAATTG 1222
Query 1257 GAAGGAGAAGGAAAGAGGTAGACTGTTTTCATGCCACCACTTGGAATGAGACGAAGAAGC 1316
|||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||
Sbjct 1223 GAAGGAGAAGGAAAGAGGCAGACTGCTTTGATGCCACCACTTGGAATGAGACGAAGAAGC 1282
Query 1317 ATAAAGTTTTATCCACTGGTCAGCTAGCCAGGGATAACTCAGCTTGTGGTTTAGGTGGGG 1376
| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1283 AAAAAGTTTTTTCCACTGGTCAGCGAGCCAGGGATAACTCAGCTTGTGGTTTAGGTGGGG 1342
Query 1377 CAAGTCTTACTACTGATGGGTTTACAACAAAAAGTAACTTGCAGGAAGGTTGTAGAAAAG 1436
||||| || ||| | ||||||||||||||||||||||||||||||||||
Sbjct 1343 CAAGT-TT--TAC---------T---ACAAAAAGTAACTTGCAGGAAGGTTGTAGAAAAG 1387
Query 1437 ATGGTGAAAGTGATCCCAGAGTCGCAAATAAAATAAAGTTTGTTGGGTTGCATGCTGTGA 1496
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1388 ATGGAGAAAGTGATCCCAGAGTCGCAAATAAAATAAAGTTTGTTGGGTTGCATGCTGTGA 1447
Query 1497 AAGAGaaaaaaaCATGTCCGACAAAGTTGCAACAGAACCGTAGCAAATATCGTATTGGTG 1556
| |||||||| ||||||||||||||||||||||||||| |||||||| ||||| ||||||
Sbjct 1448 AGGAGAAAAAGACATGTCCGACAAAGTTGCAACAGAACAGTAGCAAAAATCGTTTTGGTG 1507
Query 1557 ATAAAGTTTTATCAAAGATGCCTTTG-AAGGATGCCGCATATATAGGTCACAATAGCATG 1615
||||| |||||||||| ||||| ||| ||||||||| ||||| |||||||||||||||||
Sbjct 1508 ATAAATTTTTATCAAATATGCC-TTGCAAGGATGCCACATATGTAGGTCACAATAGCATG 1566
Query 1616 GACACTGGGTTTGATTTTGCGGTTGCACCTTCTTCCACCAGTGTTGACCTAGATTATTGG 1675
|||| | |||||||||| |||||||| |||||||||||||||||||| ||||| |||||
Sbjct 1567 GACATTAAGTTTGATTTTCCGGTTGCAACTTCTTCCACCAGTGTTGACGTAGATAATTGG 1626
Query 1676 GCCCAATGTGAGAGTTGTGAGAAATGGCGGCTACTGCCCTATGACCTGAATACTGAGAAG 1735
|||||||||||||||||||||| |||||||||| ||||||||| |||||||| |||| ||
Sbjct 1627 GCCCAATGTGAGAGTTGTGAGACATGGCGGCTATTGCCCTATGGCCTGAATATTGAGCAG 1686
Query 1736 CTGCCTGATAAGTGGTTGTGTAGCATGCAAACCTGGCTGCCTGGAATGAACCACTGTGGC 1795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1687 CTGCCTGATAAGTGGTTGTGTAGCATGCAAACCTGGCTGCCTGGAATGAACCACTGTGGC 1746
Query 1796 GTCAGCGAGGAAGAGACTACAAACGCAATTAAATCCTTTCATGCTAGTGAGGGTCATGGT 1855
|||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1747 GTCAGCAAGGAAGAGACTATAAACGCAATTAAATCCTATCATGCTAGTGAGGGTCATGGT 1806
Query 1856 CCTGACACTGGTGTTAAACTCCTCTCTGATGTTCGTAATGCTGATAAAATCTACCAACCT 1915
|||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 1807 CCTGTCACTGGTGTTAAACTCCTCTCTGATGTTAGTAATGCTGATAAAAGCTACCAACCT 1866
Query 1916 TTAACTTCTGGTTCATTGCCTAATCCAATTGAAAAGAAGTCTAACGT-AGAAGACTTATC 1974
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 1867 TTAACTTCTGGTTCATTGCCTAATCCAATTGAAAAGAAGTCTAACGTCA-AAGACTTATC 1925
Query 1975 GCAAGGAGTTTCAAGCAACAT 1995
||||||||||||| |||||
Sbjct 1926 ACAAGGAGTTTCAAAAAACAT 1946
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 149375974025
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5