BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G18330.2 Length=1659 Score E Sequences producing significant alignments: (Bits) Value Ahg493034 jgi|Araly1|493034|fgenesh2_kg.7__2467__AT4G18330.2 2543 0.0 Ahg924959 jgi|Araly1|924959|scaffold_200520.1 1554 0.0 Ahg343503 jgi|Araly1|343503|fgenesh1_pg.C_scaffold_3003266 1406 0.0 Ahg919093 jgi|Araly1|919093|scaffold_100374.1 1236 0.0 Ahg925067 jgi|Araly1|925067|scaffold_200628.1 907 0.0 > Ahg493034 jgi|Araly1|493034|fgenesh2_kg.7__2467__AT4G18330.2 Length=1624 Score = 2543 bits (1377), Expect = 0.0 Identities = 1546/1628 (95%), Gaps = 10/1628 (1%) Strand=Plus/Plus Query 3 AAATCGAGACTTTATAGTACTCAGGTTTGTCGGAATCGACTGAGTATCGAAATTATTGTG 62 ||| |||||||||| ||||| ||| || |||||||||||||||| ||||||||||||||| Sbjct 1 AAAGCGAGACTTTACAGTACGCAGATTAGTCGGAATCGACTGAGAATCGAAATTATTGTG 60 Query 63 GTGTTTTGTGAACAGAAACCAAGCAGGATTAAAGATGGTT---CAATCTGTGTTAATTTC 119 ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct 61 GTGTTTTGTGAACAGAAACCAAGCAGGATAAAAGATGGTTCAACAATCTGTGTTAATTTC 120 Query 120 GCGTAACAAGGGTTTGGCGGAGCAAGATCTAACTAAGCTTGATGTAACAAAGTTACATCC 179 |||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||| Sbjct 121 GCGTAACAAGGGTTTGGCTGAGCAAGATCTAAGTAAACTTGATGTAACAAAGTTACATCC 180 Query 180 TCTGTTTCCTGAAGTCATTTCTCGCCAAGCAACCATAAATATCGGAACCATTGGTCATGT 239 ||||| ||| || ||||||||||||||||| ||||||||||| ||||||||||| ||||| Sbjct 181 TCTGTCTCCCGAGGTCATTTCTCGCCAAGCGACCATAAATATAGGAACCATTGGCCATGT 240 Query 240 CGCTCACGGTAAATCGACTATAGTGAAAGCTATCTCTGGTGTTCAGACTGTGCGTTTTAA 299 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 241 CGCACACGGTAAATCGACTATTGTGAAAGCTATCTCTGGTGTTCAGACTGTGCGTTTTAA 300 Query 300 GAATGAATTAGAGCGTAACATTACCATTAAGCTTGGTTATGCAAATGCAAAGATTTACAA 359 ||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 301 GAATGAACTGGAGCGTAACATTACCATTAAACTTGGTTATGCAAATGCAAAGATTTACAA 360 Query 360 GTGTGAGGATGACAAGTGCCCTAGACCAATGTGCTACAAGTCATATGGGAGTGGAAAAGA 419 |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 361 ATGTGAGGATGACAAGTGCCCTAGACCAATGTGTTACAAGTCTTATGGGAGTGGAAAAGA 420 Query 420 AGACAACCC-AACTTGTGATGTCCCCGGATTTGAGAATTGCAAGATGACACTACGGAGAC 478 ||||||||| || |||||||||||| ||||||||||| |||||||||| ||||| ||||| Sbjct 421 AGACAACCCGAA-TTGTGATGTCCCTGGATTTGAGAAATGCAAGATGAAACTACTGAGAC 479 Query 479 ATGTCTCATGTGTCGATTGTCCGGGACATGATATTCTTATGGCGACAATGCTCAATGGAG 538 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 480 ATGTCTCATTTGTCGATTGTCCGGGACATGATATTCTTATGGCGACAATGCTCAATGGAG 539 Query 539 CAGCAATCGTGGATGGTGCTTTACTTCTAATTGCTGCTAACGAGAGTTGTCCACAACCAC 598 |||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct 540 CAGCAATCATGGATGGTGCTTTACTTCTAATTGCTGCTAATGAGACTTGTCCACAACCAC 599 Query 599 AAACCGCTGAACATCTTGCTTCTGTTGATATGATGCGCCTTAAGCATATCATAATCCTTC 658 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 600 AAACTGCTGAACATCTTGCTTCTGTTGATATGATGCGTCTTAAGCATATCATAATCCTTC 659 Query 659 AGAACAAGATTGATCTCATTAATGAGAAAGCCGCCACTGAACAGCACGAGGCTATTCAGA 718 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 660 AGAACAAGATTGATCTCATTAATGAGAAAGCCGCCACTGAACAGCACGAGGCGATTCAGA 719 Query 719 AATTTATAACGAACACGAATGCTGAGGATGCACCTATAGTTCCTGTCTCAGCACAACTGA 778 |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| | Sbjct 720 AATTTATAACGAACACAAATGCCGAGGATGCACCTATAGTTCCTGTCTCAGCACAACTTA 779 Query 779 AATACAACATTGATGTTGTGAGTGAATACATTGTCAAGAAGATTCCAATCCCTGTGAGAG 838 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 780 AATACAACATTGATGTTGTGAGTGAATACATTGTCAAGAAGATACCAATCCCTGTGAGAG 839 Query 839 ACTTTGTGTCACCACCAAAGATGATTGTGATTCGTTCTTTCGATGTCAATAAACCTGGCT 898 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 840 ACTTTGTGTCACCGCCAAAGATGATTGTGATTCGTTCTTTCGATGTCAATAAACCTGGCT 899 Query 899 CGGCGGGTCATGAAATGAAAGGTGGTGTTGCTGGTGGAAGTATCCTCCAGGGTGTTTTGA 958 | || |||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 900 CTGCTGGTCATGAAATGAAAGGTGGAGTTGCTGGTGGAAGTATCCTCCAGGGAGTTTTGA 959 Query 959 AAGTGAACCAACTGATTGAAATTAGACCTGGTATCACTGGCAAAGATGAGCATGGAAACT 1018 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 960 AAGTGAACCAACTGATTGAAATTAGACCTGGTATCACTGGCAAAGATGAACTTGGAAACT 1019 Query 1019 CAAAATGCACTCCAATTTACTCGCGTATAACTTCACTATACGCGGAACAGAACGAGCTTC 1078 |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct 1020 CAAAATGCACTCCAATTTACTCCCGTATAACTTCACTTTACGCGGAACAGAACGAGCTTC 1079 Query 1079 AGTTTGCTGTACCGGGAGGTCTAATCGGAGTTGGAACAACCATGGACCCTACGCTTACGC 1138 |||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1080 AGTTCGCTGTCCCGGGAGGTCTAATTGGAGTTGGAACAACCATGGACCCTACGCTTACGC 1139 Query 1139 GTGCTGATAGGTTGGTTGGTCAAGTCCTTGGTGAAATGGGTACTCTCCCTGACGTCTTTG 1198 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct 1140 GTGCTGATAGGTTGGTTGGTCAAGTCCTTGGTGAAATGGGAACTCTCCCTGATGTCTTTG 1199 Query 1199 TTGAGCTTGAAGTAAGTTACCAGCTTCTGACTCGTCTCATTGGAGTGAGGACAAAGGAAA 1258 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1200 TTGAGCTTGAAGTAAGTTTCCAGCTTCTGACTCGTCTCATTGGAGTGAGGACAAAGGAAA 1259 Query 1259 AAGAGAAGCAAATGAAAGTGTCAAAGCTAACCAAAGAAGAGATATTGATGGTGAACATCG 1318 |||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||| Sbjct 1260 AAGAGAAGCAAATGAAAGTGTCAAAGCTAACCAAAGAAGAGATACTAATGGTTAACATCG 1319 Query 1319 GGTCTATGTCTACGGGAGCTAAGGTTATTGGAGTCAAGAAAGATATGGTGAAACTCCAAC 1378 |||| |||||||| |||||||||||||||||||| |||||||||||||||||||| |||| Sbjct 1320 GGTCCATGTCTACAGGAGCTAAGGTTATTGGAGTGAAGAAAGATATGGTGAAACTTCAAC 1379 Query 1379 TGACGTCTCCGGTGTGTACCACCATAGGAGAGAAGGTTGCTTTAAGCCGACGTGTCGATA 1438 ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 1380 TGACGTCTCCGGTGTGTACCACCATAGGAGAGAAGGTGGCTTTAAGCCGCCGTGTCGATA 1439 Query 1439 GGCATTGGCGTCTAATTGGTAAGGGTCAGATTATGGCTGGAACCACCATCGATGTTCCTC 1498 ||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||| Sbjct 1440 GGCATTGGCGTCTTATTGGTAAGGGTCAGATTCTTGCTGGAACCACCATCGATGTTCCTC 1499 Query 1499 CTCCTCCTTTCTAATGAAGTAGTGATGAGTTTTTTATATTGTTTGCATTCAAAAATAATT 1558 ||||||||||||||||| |||||||||| |||||| | || |||||||||||||||||| Sbjct 1500 CTCCTCCTTTCTAATGAGGTAGTGATGAATTTTTT-T-TT-TTTGCATTCAAAAATAATA 1556 Query 1559 AACATGTG--CCTTTGTATGTTTAATCACTTTCTTTCGACTACAATATAAAACTATATTC 1616 |||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 1557 AACATGTGAACCTTTGTATGTTCGATCACTTTCTTTCGACTTCAATATAAAACTATATTC 1616 Query 1617 ATATTTAA 1624 |||||||| Sbjct 1617 ATATTTAA 1624 > Ahg924959 jgi|Araly1|924959|scaffold_200520.1 Length=1441 Score = 1554 bits (841), Expect = 0.0 Identities = 1214/1394 (87%), Gaps = 26/1394 (2%) Strand=Plus/Plus Query 126 CAAGGGTTTGGCGGAGCAAGATCTAACTAAGCTTGATGTAACA-AAGTTACATCCTCTGT 184 ||||||||| || || |||||||||| |||||||||||||| | || |||||||||||| Sbjct 32 CAAGGGTTTAGCTGAACAAGATCTAAGTAAGCTTGATGTAA-ATGAGCTACATCCTCTGT 90 Query 185 TTCCTGAAGTCATTTCTCGCCAAGCAACCATAAATATCGGAACCATTGGTCATGTCGCTC 244 ||| || ||||| |||||||| ||||||||||| || ||||||||||| ||||| || | Sbjct 91 CTCCCGAGGTCATATCTCGCCAGGCAACCATAAACATAGGAACCATTGGACATGTTGCAC 150 Query 245 ACGGTAAA-TCGACTATAGTGAAAGCTATCTCTGGTGTTCAGACTGTGCGTTTTAAGAAT 303 |||| ||| || || | ||||||||||| |||||||| |||||||| |||||||||||| Sbjct 151 ACGG-AAAGTCTACGGTTGTGAAAGCTATTTCTGGTGTGCAGACTGTCCGTTTTAAGAAT 209 Query 304 GAATTAGAGCGTAACATTACCATTAAGCTTGGTTATGCAAATGCAAAGATTTA-CAAGTG 362 ||||| |||||||||||||||||||| ||||| ||||||||||| |||||||| ||| || Sbjct 210 GAATTGGAGCGTAACATTACCATTAAACTTGGATATGCAAATGCCAAGATTTACCAA-TG 268 Query 363 TGAGGATGACAAGTGCCCTAGACCAATGTGCTACAAGTCATATGGGAGTGGAAAAGAAGA 422 ||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 269 TGAGGATAACAAGTGCCCTAGACCAATGTGCTACAAGTCTTATGGGAGTGGGAAAGAAGA 328 Query 423 CAACCCAACTTGTGATGTCCCCGGATTTGAGAATTGCAAGATGACA-CTACGGAGACATG 481 |||||||| ||| ||||||| ||||||||||| |||||||||| | |||| ||| |||| Sbjct 329 CAACCCAAATTGCCATGTCCCTGGATTTGAGAACTGCAAGATGA-AGCTACTGAGGCATG 387 Query 482 TCTCATGTGTCGATTGTCCGGGACATGATATTCTTATGGCGACAATGCTCAATGGAGCAG 541 |||| | ||| ||||| ||||||||||||||||| ||||| |||||||||||||| || | Sbjct 388 TCTCCTTTGTGGATTGCCCGGGACATGATATTCTCATGGCCACAATGCTCAATGGGGCCG 447 Query 542 CAATCGTGGATGGTGCTTTACTTCTAATTGCTGCTAACGAGAGT-TGTCCACAACCACAA 600 | ||| ||||||||||| ||||| |||||||||| || ||| || ||||| |||||||| Sbjct 448 CCATCATGGATGGTGCTCTACTTTTAATTGCTGCGAATGAG-GTCTGTCCTCAACCACAG 506 Query 601 ACCGCTGAACATCTTGCTTCTGTTGATATGATGCGCCTTAAGCATATCATAATCCTTCAG 660 || ||||||||||||||||| || |||||||||| |||||||||||| |||||||||||| Sbjct 507 ACAGCTGAACATCTTGCTTCCGTCGATATGATGCACCTTAAGCATATTATAATCCTTCAG 566 Query 661 AACAAGATTGATCTCATT-AATGAGAAAGCCGCCACT-GAACAGCACGA-GGCTATTCAG 717 |||||||||||||||||| || || |||||||||| | ||||||||| | ||| |||||| Sbjct 567 AACAAGATTGATCTCATTCAA-GAAAAAGCCGCCA-TCGAACAGCAC-ACGGCAATTCAG 623 Query 718 AAATTTATAACGAACACGAATGCTGAGGATGCACCTATAGTTCCTGTCTCAGCACAACTG 777 | ||||||||||||||| ||||| |||| ||| ||||||||||||||||||||||||||| Sbjct 624 AGATTTATAACGAACACAAATGCCGAGGGTGCCCCTATAGTTCCTGTCTCAGCACAACTG 683 Query 778 AAATACAACATTGATGTTGTGAGTGAATACATTGTCAAGAAGATTCCAATCCCTGTGAGA 837 |||||||||||||||| |||| | || ||||||||||||||||||||||||||| || Sbjct 684 AAATACAACATTGATGCTGTGTGCGAGTACATTGTCAAGAAGATTCCAATCCCTAAAAGG 743 Query 838 GACTTTGTGTCACCACCAAAGATGATTGTGATTCGTTCTTTCGATGTCAATAAACCTGGC 897 || ||||||||||| ||||||||||| | ||||||||||| |||||||||||||||||| Sbjct 744 GATTTTGTGTCACCGCCAAAGATGATAATCATTCGTTCTTTTGATGTCAATAAACCTGGC 803 Query 898 TCGGCGGGT-CATGAAATGAAAGGTGGTGTTGCTGGTGGAAGTATCCTCCAGGGTGTTTT 956 | | || | | ||| || |||||||| || || |||||||||||| ||| ||||||||| Sbjct 804 TATGAGGTTAC-TGATATTAAAGGTGGAGTGGCAGGTGGAAGTATCTTCCGGGGTGTTTT 862 Query 957 GAAAGTGAACCAACTGATTGAAATTAGACCTGGTATCACTGGCAAAGATGAGCATGGAAA 1016 |||||| |||||| ||||||| || ||||||||||| | |||||||||||| |||||| Sbjct 863 GAAAGTAAACCAATTGATTGAGATCCGACCTGGTATCGTTAGCAAAGATGAGCTTGGAAA 922 Query 1017 CTCAAAATGCACTCCAATTTACTCGCGTATAACTTCACTATACGCGGAACAGAACGAGCT 1076 | ||| |||| |||| |||||||| ||||| |||||| | ||||| |||||||||||||| Sbjct 923 CCCAAGATGCTCTCCCATTTACTCCCGTATCACTTCATTGTACGCAGAACAGAACGAGCT 982 Query 1077 TCAGTTTGCTGTACCGGGAGGTCTAATCGGAGTTGGAACAACCATGGACCCTACGCTTAC 1136 |||||||||||| ||||||||||| ||||||||||| ||||| |||||||||||||| || Sbjct 983 TCAGTTTGCTGTGCCGGGAGGTCTGATCGGAGTTGGGACAACGATGGACCCTACGCTCAC 1042 Query 1137 GCGTGCTGATAGGTTGGTTGGTCAAGTCCTTGGTGAAATGGGTACTCTCCCTGACGTCTT 1196 ||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||| Sbjct 1043 GCGTGCTGATAGGTTGGTTGGTCAAGTGCTTGGTGAAATGGGTTCTCTCCCTGATGTCTA 1102 Query 1197 TGTTGAGCTTGAAGTAAGTTACCAGCTTCTGACTCGTCTCATTGGAGTGAGGACAAAGGA 1256 |||||||||||| || |||| |||||||||||| ||||| ||||| |||||||||||||| Sbjct 1103 TGTTGAGCTTGAGGTGAGTTTCCAGCTTCTGACCCGTCTTATTGGGGTGAGGACAAAGGA 1162 Query 1257 AAAAGAGAAGCAAATGAAAGTGTCAAAGCTAACCAAAGAAGAGATATTGATGGTGAACAT 1316 |||||||||||| ||||||||| ||||||||| ||| | ||||||| ||||||||||||| Sbjct 1163 AAAAGAGAAGCAGATGAAAGTGGCAAAGCTAAGCAAGGGAGAGATACTGATGGTGAACAT 1222 Query 1317 CGGGTCTATGTCTACGGGAGCTAAGGTTATTGGAGTCAAGAAAGATATGGTGAAACTCCA 1376 |||||| ||||| |||||||||||||| | ||||| |||||||||||| ||||| | || Sbjct 1223 CGGGTCGATGTCGGCGGGAGCTAAGGTTCTAGGAGTGAAGAAAGATATGATGAAAGTGCA 1282 Query 1377 ACTGAC-GTCTCCGGTGTGTACCACCATAGGAGAGAAGGTTGCTTTAAGCCGACGTGTCG 1435 |||||| || || || || |||| ||||||||||||||| ||| ||||||| ||||||| Sbjct 1283 ACTGACAGTG-CCTGTCTGCACCAACATAGGAGAGAAGGTGGCTCTAAGCCGCCGTGTCG 1341 Query 1436 ATAGGCATTGGCGTCTAATTGGTAAG-GGTCAGATT-ATGGCTGGAACCACCAT-CGATG 1492 | |||||||||||| | |||||| | ||||||||| | ||||||||||||| | | | Sbjct 1342 ACAGGCATTGGCGTTTGATTGGTC-GTGGTCAGATTGA-GGCTGGAACCACCGTTCCC-G 1398 Query 1493 TTCCTCCTCCTCCT 1506 | |||||||||||| Sbjct 1399 TCCCTCCTCCTCCT 1412 > Ahg343503 jgi|Araly1|343503|fgenesh1_pg.C_scaffold_3003266 Length=1398 Score = 1406 bits (761), Expect = 0.0 Identities = 1181/1381 (86%), Gaps = 40/1381 (3%) Strand=Plus/Plus Query 124 AACAAGGGTTTGGCGGAGCAAGATCTAACTAAGCTTGATGTAACAAAGTTACATCCTCTG 183 |||||||| || || || |||||||||| ||| ||||||||| | || |||||||||| Sbjct 10 AACAAGGGCTTAGCTGAACAAGATCTAAGTAAACTTGATGTAGCTCAGCTACATCCTCTC 69 Query 184 TTTCCTGAAGTCATTTCTCGCCAAGCAACCATAAATATCGGAACCATTGGTCATGTCGCT 243 | |||||| ||||| ||||| ||||| || || ||||| || || ||||| ||||| ||| Sbjct 70 TCTCCTGAGGTCATCTCTCGACAAGCCACAATTAATATAGGGACTATTGGCCATGTTGCT 129 Query 244 CACGGTAAATCGACTATAGTGAAAGCTATCTCTGGTGTTCAGACTGTGCGTTTTAAGAAT 303 ||||| |||||||| || ||||||||||| || ||||| || ||||| ||||||| | Sbjct 130 CACGGGAAATCGACAATCGTGAAAGCTATTTCCGGTGTGCATACTGTTAAATTTAAGAGT 189 Query 304 GAATTAGAGCGTAACATTACCATTAAGCTTGGTTATGCAAATGCAAAGATTTACAAGTGT 363 ||||| |||||||||||||||||||| |||||||||||||| |||||||||||||| ||| Sbjct 190 GAATTGGAGCGTAACATTACCATTAAACTTGGTTATGCAAACGCAAAGATTTACAAATGT 249 Query 364 GAGGATGACAAGTGCCCTAGACCAATGT-G-CTACAAGTCATAT-GGGAGTGGAAAAGAA 420 || | | || ||||||||||| | || | ||||||||| | | |||||||| |||||| Sbjct 250 GA--A--A-AA-TGCCCTAGACC-A-GTAGCCTACAAGTC-TTTCGGGAGTGGCAAAGAA 300 Query 421 GACAACCCAACTTGTGATGTCCCCGGATTTGAGAAT-TGCAAGATGACACTACGGAGACA 479 ||||| ||||||||||||||| | ||| |||| || |||||||||| ||||| |||||| Sbjct 301 GACAATCCAACTTGTGATGTCTCTGGACATGAG-ATGTGCAAGATGAAACTACTGAGACA 359 Query 480 TGTCTCATGTGTCGATTGTCCGGGACATGATATTCTTATGGCGACAATGCTCAATGGAGC 539 |||||||| |||||||||||||||||| |||||||| |||||||||||| | |||||||| Sbjct 360 TGTCTCATTTGTCGATTGTCCGGGACACGATATTCTGATGGCGACAATGTTGAATGGAGC 419 Query 540 AGCAATCGTGGATGGTGCTTTACTTCTAATTGCTGCTAACGAGAGTTGTCCACAACCACA 599 ||| || ||||||||||| |||| | |||||||| || |||| ||||| |||||||| Sbjct 420 AGCGATTATGGATGGTGCTCTACTAATCATTGCTGCAAATGAGACATGTCCGCAACCACA 479 Query 600 AACCGCTGAACATCTTGCTTCTGTTGATATGATGCGCCTT-AAGCATATCATAATCCTTC 658 ||| || |||||||||||||||||||||||||||| |||| ||| ||||||||||| ||| Sbjct 480 AACTGCAGAACATCTTGCTTCTGTTGATATGATGCACCTTAAAG-ATATCATAATCATTC 538 Query 659 AGAACAAGATTGATCTCAT-TAATGAGAAA-GCCGCCACTGA-ACAGCACGAGG-CTATT 714 ||||||||||||||||||| || || ||| | || | || ||||||||||| | ||| Sbjct 539 AGAACAAGATTGATCTCATCCAA-GA-AAACGAGGCTA-GGAGACAGCACGAGGAC-ATT 594 Query 715 CAGAAATTTATAACGAACACGAATGCTG-AGGATGCACCTATAGTTCCTGTCTCAGCACA 773 |||| ||||||||||||||| ||||| | ||| ||| ||||||||||||||||||||||| Sbjct 595 CAGAGATTTATAACGAACACAAATGCGGAAGG-TGCTCCTATAGTTCCTGTCTCAGCACA 653 Query 774 ACTGAAATACAACATTGATGTTGTGAGTGAATACATTGTCAAGAAGATTCCAATCCCTGT 833 ||||||||||||||| ||||||||| | || ||||| |||||||||||||||||||||| Sbjct 654 ACTGAAATACAACATCGATGTTGTGTGCGAGTACATAGTCAAGAAGATTCCAATCCCTGA 713 Query 834 GAGAGACTTTGTGTCACCACCAAAGA-TGATTGTGATTCGTTCTTTCGATGTCAATAAAC 892 ||| || ||||||||||| |||| || ||||||||||||||||||| ||||||||||||| Sbjct 714 GAGGGATTTTGTGTCACCTCCAA-GAATGATTGTGATTCGTTCTTTTGATGTCAATAAAC 772 Query 893 CTGGCTCGG-CGGGTCATGAAATGAAAGGTGGTGTTGCTGGTGGAAGTATCCTCCAGGGT 951 ||||||| | | | |||| ||||||||||| || || ||||||||||||||||||||| Sbjct 773 CTGGCTCTGACTA-TAATGATATGAAAGGTGGAGTCGCAGGTGGAAGTATCCTCCAGGGT 831 Query 952 GTTTTGAAAGTGAACCA-ACTGATTGAAATTAGACCTGGTATCACTGGCAAAGATGAGCA 1010 |||||||||||| || | | || || ||| ||||||| || ||||||||||||||||| Sbjct 832 GTTTTGAAAGTGGGGCATA-TAATAGAGATTCGACCTGGAATTACTGGCAAAGATGAGCA 890 Query 1011 TGGAAACTCAAAATGCACTCCAATTTACTCGCGTATAACTTCACTATACGCGGAACAGAA 1070 |||| || | ||||||||||| |||||| |||||||||||||| | |||||||||||||| Sbjct 891 TGGAGACACTAAATGCACTCCCATTTACACGCGTATAACTTCATTGTACGCGGAACAGAA 950 Query 1071 CGAGCTTCAGTTTGCTGTACCGGGAGGTCTAATCGG-AGTTGGAACAACCATGGACCCTA 1129 |||||||||||||||||| ||||||||| |||| || | |||| |||| |||||| |||| Sbjct 951 CGAGCTTCAGTTTGCTGTCCCGGGAGGTTTAATTGGGA-TTGGGACAAGCATGGATCCTA 1009 Query 1130 CGCTTACGCGTGCTGATAGGTTGGTTGGTCAAGTCCTTGGTGAAATGGGTACTCTCCCTG 1189 |||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct 1010 CGCTTACGCGTGGTGATAGGTTAGTTGGTCAAGTCCTTGGTGAAATAGGTACTCTCCCTG 1069 Query 1190 ACGTCTTTGTTGAGCTTGAAGTAAGTTACCAGCTTCTGACTCGTCTCATTGGAGTGAGGA 1249 | |||| |||||||||||||||||||| |||||||||||| |||||||||||||| | || Sbjct 1070 ATGTCTATGTTGAGCTTGAAGTAAGTTTCCAGCTTCTGACACGTCTCATTGGAGTAAAGA 1129 Query 1250 CAAAGGAAAAAGAGAAGCAAATGAAAGTGTCAAAGCTAACCAAAGAAGAGATATTGATGG 1309 ||||||||| ||||| |||||||| |||||||||||||| ||| | |||| || ||||| Sbjct 1130 CAAAGGAAACAGAGAGGCAAATGAGAGTGTCAAAGCTAATCAAGGGAGAGGTACTGATGT 1189 Query 1310 TGAACATCGGGTCTATGTCTACGGGAGCTAAGGTTATTGGAGTCAAGAAAGATATGGTGA 1369 |||| ||||| || ||||| |||||||||| |||||||||||| |||||||||||| ||| Sbjct 1190 TGAATATCGGATCAATGTCGACGGGAGCTATGGTTATTGGAGTAAAGAAAGATATGATGA 1249 Query 1370 AACTCCAACTGACGTCTCCG-GTGTGTACCACCATAGGAGAGAAGGTTGCTTTAAGCCGA 1428 || | |||||||| |||| || || |||| |||||||||||| || ||| |||| || Sbjct 1250 AAGTGAAACTGACG-CTCCCTGTATGCACCAACATAGGAGAGAAAGTGGCTATAAGTCGC 1308 Query 1429 CGTGTCGATAGGCATTGGCGTCTAATTGGTAAG-GGTCAGATT-ATGGCTGGAACCACCA 1486 ||||| ||||||||||||||| | || ||| | ||||||||| | |||||||||||||| Sbjct 1309 CGTGTTGATAGGCATTGGCGTTTGATCGGTC-GCGGTCAGATTGA-GGCTGGAACCACCA 1366 Query 1487 T 1487 | Sbjct 1367 T 1367 > Ahg919093 jgi|Araly1|919093|scaffold_100374.1 Length=1442 Score = 1236 bits (669), Expect = 0.0 Identities = 1193/1443 (83%), Gaps = 48/1443 (3%) Strand=Plus/Plus Query 94 AAGATGGTTCAATCTGTGTTAATTTCGCGTAACAAGGGTTTGGCGGAGCAAGATC-TAAC 152 |||| | |||||||| || |||| ||| | ||||| |||||||| |||||||||| ||| Sbjct 4 AAGAAGCTTCAATCTTTGATAATGTCGAGGAACAAAGGTTTGGCTGAGCAAGATCTTAA- 62 Query 153 TAAGCTT-GATGTAACAAAGTTACATCCTCTGTTTCCTGAAGTCATTTCTCGCCAAGCAA 211 || || |||||||| | |||||||| ||| ||||| |||||||||||||| || | Sbjct 63 -AAAATTGGATGTAACTGTGCTACATCCTTTGTCCCCTGAGGTCATTTCTCGCCAGGCCA 121 Query 212 CCATAAATATCGGAACCATTGGTCATGTCGCTCACGGTAAA-TCGACTATAGTGAAAGCT 270 | || ||||| ||||||||||| ||||||||||| || ||| || ||| | ||||||||| Sbjct 122 CTATTAATATAGGAACCATTGGCCATGTCGCTCATGG-AAAGTCCACTGTTGTGAAAGCT 180 Query 271 ATCTCTGGTGTTCAGACTGTGCGTTTTAAGAATGAATTAGAGCGTAACATTACCATTAAG 330 || |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 181 ATTTCTGGTGTCCAGACTGTCCGTTTTAAGAATGAATTGGAGCGTAACATTACCATTAAG 240 Query 331 CTTGGTTATGCAAATGCAAAGATTTACAAGTGTGAGGATGACAAGTGCCCTAGACCAATG 390 ||||| ||||||||||| ||||||||||| ||||||||||| || ||||||||||||||| Sbjct 241 CTTGGATATGCAAATGCTAAGATTTACAAATGTGAGGATGAGAAATGCCCTAGACCAATG 300 Query 391 TGCTACAAGTCATATGGGAGTGGAAAAGAAGACAAC-CCAACTTGTGATGTCCCCGGATT 449 ||||||||| | || || ||||||||||||||| || |||| |||||||||||||||||| Sbjct 301 TGCTACAAGGCCTACGGAAGTGGAAAAGAAGAC-ACTCCAAATTGTGATGTCCCCGGATT 359 Query 450 TGAGAATTGCAAGATGACACTACGGAGACATGTCTCATGT-GTCGATTGTCCGGGACATG 508 ||| || | |||||||| |||| ||| ||||| |||| | || ||||| |||||||| | Sbjct 360 TGAAAACTCCAAGATGAAACTATTGAGGCATGTGTCAT-TCGTGGATTGCCCGGGACACG 418 Query 509 ATATTCTTATGGCGACAATGCTCAATGGAGCAGCAATCGTGGATGGTGCTTTACTTC-TA 567 ||||||| ||||| |||||||| || |||||||| ||| |||||||||| ||| || || Sbjct 419 ATATTCTCATGGCAACAATGCTTAACGGAGCAGCCATCATGGATGGTGCACTAC-TCTTA 477 Query 568 ATTGCTGCTAACGAGA-GTTGTCCACAACCACAAACCG-CTGAACATCTTGCTTCTGTTG 625 || ||||| || |||| | ||||| |||||||||| || |||||||||||||| | || | Sbjct 478 ATCGCTGCAAATGAGACG-TGTCCGCAACCACAAA-CGTCTGAACATCTTGCTGCCGTCG 535 Query 626 ATATGATGCGCCTT-AAGCATATCATAATCCTTCAGAACAAGATTGATCTCATT-AATGA 683 | || |||| || ||||||||||| ||||||||||||||||||||||| ||| || || Sbjct 536 AGATTATGC-AATTGAAGCATATCATCATCCTTCAGAACAAGATTGATCTTATTCAA-GA 593 Query 684 GAAAGCCGCCACTGAA-CAGCACGAGGCTATTCAGAAATTTATAACGAACAC-GAATGCT 741 ||| | |||| | || ||||||||||| |||||||||||||||| |||||| | ||| Sbjct 594 GAACGTTGCCA-TTAATCAGCACGAGGCAATTCAGAAATTTATAATGAACACTG-TTGCG 651 Query 742 GAGGATGCACCTATAGTTCCTGTCTCAGCACAACTGAAATACAACATTGATGTTGTGAGT 801 || | ||| || || || || |||||||||||||||||||||||||| ||||||||| | Sbjct 652 GATGCTGCTCCAATCGTCCCCGTCTCAGCACAACTGAAATACAACATCGATGTTGTGTGC 711 Query 802 GAATACATTGTCAAGAAGATTCCAATCCCTGTGA-GAGACTTTGTGTCACCACCAAAGAT 860 || ||||| ||||||||||| |||||||||| || || | ||||||||||| ||||| || Sbjct 712 GAGTACATAGTCAAGAAGATCCCAATCCCTGAGAGGA-ATTTTGTGTCACCCCCAAATAT 770 Query 861 GATTGTGATTCGTTCTTTCGATGTCAATAAACCTGGCTCGGCGGGTCATGAAATGAAAGG 920 ||| |||||||| ||||| |||||||| |||||||| | | || | |||| || ||||| Sbjct 771 GATAGTGATTCGATCTTTTGATGTCAACAAACCTGGTTATGAGGTTGATGAGATTAAAGG 830 Query 921 TGGTGTTGCTGGTGGAAGTATCCTCCAGGGTGTTTTGAAAGTGAACCAACTGATTGAAAT 980 ||| ||||| |||||||||||||||| ||||||||||||||| |||||| | |||||||| Sbjct 831 TGGAGTTGCAGGTGGAAGTATCCTCCGGGGTGTTTTGAAAGTCAACCAATTAATTGAAAT 890 Query 981 TAGACCTGGTATCACTGGC-AAAGATGAGCATGGAAACTCAAAATGCACTCCAATTTACT 1039 ||||||||||| | | ||||| |||| ||| ||||||||||||||||||||||||| Sbjct 891 CCGACCTGGTATC-GTTACAAAAGACGAGCGTGGCAACTCAAAATGCACTCCAATTTACT 949 Query 1040 CGCGTATAACT-TCACTATACGCGGAACAGAACGAGCTTCAGTTTGCTGTACC-GGGAGG 1097 | || |||| | ||||| |||||||||||||||||||||||||||||||| || ||| || Sbjct 950 CTCGCATAA-TCTCACTCTACGCGGAACAGAACGAGCTTCAGTTTGCTGTTCCTGGG-GG 1007 Query 1098 TCTAATCGGAGTTGGAACAACCATGGACCCTACGCTTACGCGTGCTGATAGGTTGGTTGG 1157 |||||| |||||||| ||||| |||||||| || ||||| ||||| ||| | || ||||| Sbjct 1008 TCTAATAGGAGTTGGGACAACAATGGACCCAACTCTTACTCGTGCAGATCGATTAGTTGG 1067 Query 1158 TCAAGTCCTTGGTGAAATGGGTACTCTCCCTGACGTCTTTGTTGAGCTTGAAGT-AAGTT 1216 |||||||||||||||||| ||| | || ||||| ||||||||||| || || || || || Sbjct 1068 TCAAGTCCTTGGTGAAATCGGTTCACTTCCTGATGTCTTTGTTGAACTCGAGGTTAACTT 1127 Query 1217 ACCAGCTTCTGACT-CGTCTCATTGG-AGTGAGGACAAAGGAAAAAGAGAAGCAAATGAA 1274 | ||||| || ||| | |||| |||||| ||||||| | |||||| ||| ||| Sbjct 1128 -CTTTCTTCT-ACGACGTTTG-TTGGGAGTGAGAACAAAGGGATCAGAGAAACAAGGGAA 1184 Query 1275 AGTGTCAAAGCTAACCAAAGAAGAGATAT-TGATGGTGAACATCGGGTCTATGTCTACGG 1333 |||||||||||||| || | |||||| | ||||| | ||||| || |||||||| || | Sbjct 1185 GGTGTCAAAGCTAACGAAGGGAGAGAT-TCTGATGCTCAACATTGGTTCTATGTCCACTG 1243 Query 1334 GAGCTAAGGTTATTGGAGTCAA-GAAAGATATGG-TGAAACTCCAACTGAC-GTCTCCGG 1390 |||| || ||| | ||||| || | ||| ||| | ||||| |||||||| | | |||| Sbjct 1244 GAGCCAAAGTTGTGGGAGTTAAAGTC-GATCTGGCT-AAACTGCAACTGACAG-CGCCGG 1300 Query 1391 TGTGTACCACCATAGGAGAGAAGGTTGCTTTAAGCCGACGTGTCGATAGGCATTGGCGTC 1450 | ||||||| || ||||||||| || ||| ||||| | ||||| || | |||||||||| Sbjct 1301 TTTGTACCAGCAAAGGAGAGAAAGTGGCTCTAAGCAGGCGTGTGGAAAAGCATTGGCGTT 1360 Query 1451 TAATTGGTAAGGGTCAGATT-ATGGCTGGAACCACCATCGATGTTCCTCCTCCTCCTTTC 1509 | |||||| |||||||||| | | ||||||||||||| || ||||||||| | |||||| Sbjct 1361 TGATTGGTTGGGGTCAGATTCAAG-CTGGAACCACCATTGAAGTTCCTCCTTCACCTTTC 1419 Query 1510 TAA 1512 ||| Sbjct 1420 TAA 1422 > Ahg925067 jgi|Araly1|925067|scaffold_200628.1 Length=1399 Score = 907 bits (491), Expect = 0.0 Identities = 691/787 (88%), Gaps = 16/787 (2%) Strand=Plus/Plus Query 120 GCGTAACAAGGGTTTGGCGGAGCAAGATCTAACTAAGCTTGATGTAACA-AAGTTACATC 178 ||| ||||||||||| || || |||||||||| |||||||||||||| | || |||||| Sbjct 26 GCGGAACAAGGGTTTAGCTGAACAAGATCTAAGTAAGCTTGATGTAA-ATGAGCTACATC 84 Query 179 CTCTGTTTCCTGAAGTCATTTCTCGCCAAGCAACCATAAATATCGGAACCATTGGTCATG 238 |||||| ||| || ||||| |||||||| ||||||||||| || ||||||||||| |||| Sbjct 85 CTCTGTCTCCCGAGGTCATATCTCGCCAGGCAACCATAAACATAGGAACCATTGGACATG 144 Query 239 TCGCTCACGGTAAA-TCGACTATAGTGAAAGCTATCTCTGGTGTTCAGACTGTGCGTTTT 297 | || ||||| ||| || || | ||||||||||| |||||||| |||||||| |||||| Sbjct 145 TTGCACACGG-AAAGTCTACGGTTGTGAAAGCTATTTCTGGTGTGCAGACTGTCCGTTTT 203 Query 298 AAGAATGAATTAGAGCGTAACATTACCATTAAGCTTGGTTATGCAAATGCAAAGATTTA- 356 ||||||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||| Sbjct 204 AAGAATGAATTGGAGCGTAACATTACCATTAAACTTGGATATGCAAATGCCAAGATTTAC 263 Query 357 CAAGTGTGAGGATGACAAGTGCCCTAGACCAATGTGCTACAAGTCATATGGGAGTGGAAA 416 ||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 264 CAA-TGTGAGGATAACAAGTGCCCTAGACCAATGTGCTACAAGTCTTATGGGAGTGGGAA 322 Query 417 AGAAGACAACCCAACTTGTGATGTCCCCGGATTTGAGAATTGCAAGATGACA-CTACGGA 475 |||||||||||||| ||| |||||||| ||||||||||| |||||||||| | |||| || Sbjct 323 AGAAGACAACCCAAATTGCGATGTCCCTGGATTTGAGAACTGCAAGATGA-AGCTACTGA 381 Query 476 GACATGTCTCATGTGTCGATTGTCCGGGACATGATATTCTTATGGCGACAATGCTCAATG 535 | |||||||| | ||| ||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct 382 GGCATGTCTCCTTTGTGGATTGCCCGGGACATGATATTCTCATGGCCACAATGCTCAATG 441 Query 536 GAGCAGCAATCGTGGATGGTGCTTTACTTCTAATTGCTGCTAACGAGAGT-TGTCCACAA 594 | || || ||| ||||||||||| ||||| |||||||||| || ||| || ||||| ||| Sbjct 442 GGGCCGCCATCATGGATGGTGCTCTACTTTTAATTGCTGCGAATGAG-GTCTGTCCTCAA 500 Query 595 CCACAAACCGCTGAACATCTTGCTTCTGTTGATATGATGCGCCTTAAGCATATCATAATC 654 ||||| || ||||||||||||||||| || |||||||||| |||||||||||| |||||| Sbjct 501 CCACAGACAGCTGAACATCTTGCTTCCGTCGATATGATGCACCTTAAGCATATTATAATC 560 Query 655 CTTCAGAACAAGATTGATCTCATT-AATGAGAAAGCCGCCACT-GAACAGCACGA-GGCT 711 |||||||||||||||||||||||| || || |||||||||| | ||||||||| | || Sbjct 561 CTTCAGAACAAGATTGATCTCATTCAA-GAAAAAGCCGCCA-TCGAACAGCAC-ACAGCA 617 Query 712 ATTCAGAAATTTATAACGAACACGAATGCTGAGGATGCACCTATAGTTCCTGTCTCAGCA 771 ||||||| ||||||||||||||| ||||| |||| ||| ||||||||||||||||||||| Sbjct 618 ATTCAGAGATTTATAACGAACACAAATGCCGAGGGTGCCCCTATAGTTCCTGTCTCAGCA 677 Query 772 CAACTGAAATACAACATTGATGTTGTGAGTGAATACATTGTCAAGAAGATTCCAATCCCT 831 |||||||||||||||||||||| |||| | || ||||||||||||||||||||||||||| Sbjct 678 CAACTGAAATACAACATTGATGCTGTGTGCGAGTACATTGTCAAGAAGATTCCAATCCCT 737 Query 832 GTGAGAGACTTTGTGTCACCACCAAAGATGATTGTGATTCGTTCTTTCGATGTCAATAAA 891 || || ||||||||||| ||||||||||| | ||||||||||| |||||||||||| Sbjct 738 AAAAGGGATTTTGTGTCACCGCCAAAGATGATAATCATTCGTTCTTTTGATGTCAATAAA 797 Query 892 CCTGGCT 898 ||||||| Sbjct 798 CCTGGCT 804 Score = 621 bits (336), Expect = 5e-177 Identities = 489/563 (87%), Gaps = 10/563 (2%) Strand=Plus/Plus Query 949 GGTGTTTTGAAAGTGAACCAACTGATTGAAATTAGACCTGGTATCACTGGCAAAGATGAG 1008 |||||||||||||| |||||| ||||||| || ||||||||||| | ||||||||||| Sbjct 813 GGTGTTTTGAAAGTAAACCAATTGATTGAGATCCGACCTGGTATCGTTAGCAAAGATGAG 872 Query 1009 CATGGAAACTCAAAATGCACTCCAATTTACTCGCGTATAACTTCACTATACGCGGAACAG 1068 | ||||||| ||| ||| |||| |||||||| ||||| |||||| | ||||| |||||| Sbjct 873 CTTGGAAACCCAAGGTGCTCTCCCATTTACTCCCGTATCACTTCATTGTACGCAGAACAG 932 Query 1069 AACGAGCTTCAGTTTGCTGTACCGGGAGGTCTAATCGGAGTTGGAACAACCATGGACCCT 1128 |||||||||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||| Sbjct 933 AACGAGCTTCAGTTTGCTGTGCCGGGAGGTCTGATCGGAGTTGGGACAACGATGGACCCT 992 Query 1129 ACGCTTACGCGTGCTGATAGGTTGGTTGGTCAAGTCCTTGGTGAAATGGGTACTCTCCCT 1188 ||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct 993 ACGCTCACGCGTGCTGATAGGTTGGTTGGTCAAGTGCTTGGTGAAATGGGTTCTCTCCCT 1052 Query 1189 GACGTCTTTGTTGAGCTTGAAGTAAGTTACCAGCTTCTGACTCGTCTCATTGGAGTGAGG 1248 || |||| |||||||||||| || |||| |||||||||||| ||||| ||||| |||||| Sbjct 1053 GATGTCTATGTTGAGCTTGAGGTGAGTTTCCAGCTTCTGACCCGTCTTATTGGGGTGAGG 1112 Query 1249 ACAAAGGAAAAAGAGAAGCAAATGAAAGTGTCAAAGCTAACCAAAGAAGAGATATTGATG 1308 |||||||||||||||||||| ||||||||| ||||||||| ||| | ||||||| ||||| Sbjct 1113 ACAAAGGAAAAAGAGAAGCAGATGAAAGTGGCAAAGCTAAGCAAGGGAGAGATACTGATG 1172 Query 1309 GTGAACATCGGGTCTATGTCTACGGGAGCTAAGGTTATTGGAGTCAAGAAAGATATGGTG 1368 |||||||||||||| ||||| |||||||||||||| | ||||| |||||||||||| || Sbjct 1173 GTGAACATCGGGTCGATGTCGGCGGGAGCTAAGGTTCTAGGAGTGAAGAAAGATATGATG 1232 Query 1369 AAACTCCAACTGACG-TCTCCGGTGTGTACCACCATAGGAGAGAAGGTTGCTTTAAGCCG 1427 ||| | ||||||||| | || || || |||| ||||||||||||||| ||| ||||||| Sbjct 1233 AAAGTGCAACTGACGGTG-CCTGTCTGCACCAACATAGGAGAGAAGGTGGCTCTAAGCCG 1291 Query 1428 ACGTGTCGATAGGCATTGGCGTCTA-ATTGGTAAG-GGTCAGATT-ATGGCTGGAACCAC 1484 |||||||| ||||||||||| || |||||| | ||||||||| | |||||||||||| Sbjct 1292 CCGTGTCGACAGGCATTGGCG-CTTGATTGGTC-GTGGTCAGATTGA-GGCTGGAACCAC 1348 Query 1485 CAT-CGATGTTCCTCCTCCTCCT 1506 | | | || |||||||||||| Sbjct 1349 CGTTCCC-GTCCCTCCTCCTCCT 1370 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 62201370085 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5