BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G18440.1
Length=1942
Score E
Sequences producing significant alignments: (Bits) Value
Ahg493016 jgi|Araly1|493016|fgenesh2_kg.7__2449__AT4G18440.1 2828 0.0
Ahg930346 jgi|Araly1|930346|scaffold_302803.1 2176 0.0
Ahg320487 jgi|Araly1|320487|fgenesh1_pm.C_scaffold_4000544 259 5e-68
> Ahg493016 jgi|Araly1|493016|fgenesh2_kg.7__2449__AT4G18440.1
Length=1833
Score = 2828 bits (1531), Expect = 0.0
Identities = 1724/1815 (95%), Gaps = 21/1815 (1%)
Strand=Plus/Plus
Query 2 TGACTCACTCACATCGTGCTTTGATTCTGGAATCTAGGTTTAAAGTTTAGACCTTTGAGA 61
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1 TGACTCACTCACATCGTGCTTTGATTCTGGAATCTAGGTTTAAAGTTTAAACCTTTGAGA 60
Query 62 TCACACTATATCAAAAATGGAGCTCAATTTCTCTTCAATGGCTATAA-CACACCCCAAAA 120
| |||||||||| |||||||||||||||| ||||| |||||| ||| || |||||||||
Sbjct 61 T--CACTATATCACAAATGGAGCTCAATTTATCTTCGATGGCTTTAACCA-ACCCCAAAA 117
Query 121 TCCCTTCTTTCGGTTTTACACCCACCGGAATATTCCTAAACCCATCAAAATCAGTGTGTT 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 118 TCCCTTCTTTCGGTTTTACACCCACCGGAATATTCCTAAACCCATCAAAATCAGTGCGTT 177
Query 181 TGGCTTCACATCATCGGCTTCCGAGAGTTTCATGCTCTGTTTCTACTACTACTGATTCTC 240
||||||| ||||||||||||||||||||||||||||||| || | |||||||||||||||
Sbjct 178 TGGCTTCTCATCATCGGCTTCCGAGAGTTTCATGCTCTG-TT-T-CTACTACTGATTCTC 234
Query 241 CCAAGCTAGTGACTTCAACAAAGGTGACGGCAATGGATGGAGTGAGCTCTAGAGACTTGG 300
| |||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||
Sbjct 235 CGAAGCTAGTGACTTCAAGAAAGGTGGTGGCAATGGCTGGAGTGAGCTCTAGAGACTTGG 294
Query 301 AGATGTCGAATTTAACGGCGTTATCGCCTTTGGATGGACGTTATTGGAGTAAAGTTAAGG 360
||||||||||||||||||| || |||||||||||||||||||||||| | ||||||||||
Sbjct 295 AGATGTCGAATTTAACGGCATTGTCGCCTTTGGATGGACGTTATTGGGGAAAAGTTAAGG 354
Query 361 ACTTGGCTTCTTCTTTGAGCGAGTTTGGATTGATCTATTTCCGAGTTTTTGTCGAGATCA 420
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 355 ACTTGGCTTCTTCTCTGAGCGAGTTTGGATTGATCTATTTCCGAGTATTTGTCGAGATCA 414
Query 421 AATGGCTTCTTAAGCTTTCGAATATTCCTGAAGTCACTGAAGTTCCAAGCTTTAGCAAAG 480
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 415 AATGGCTTCTGAAGCTTTCGAATATTCCTGAAGTCACTGAAGTTCCAAGCTTTAGCAAAG 474
Query 481 AAGCTCAGAGTTTCTTGCAAGGCATAATCGATGGATTTAGCATAGACGATGCATTGGAAA 540
|||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 475 AAGCTCAGAGTTACTTGCAAGGGATAATCGATGGATTTAGCATAGATGATGCATTGGAAG 534
Query 541 TTAAGAAGATTGAGAGAGTAACAAATCATGATGTGAAAGCAGTGGAGTATTTCTTGAAAC 600
||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct 535 TTAAGAATATTGAGAGAATAACAAATCACGATGTGAAAGCAGTGGAGTATTTCTTGAAAC 594
Query 601 AAAAGTGTGAATCACAACCAGAGATTGCTAAGGTTCTTGAGTTTTTCCATTTCGCTTGCA 660
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 595 AAAAGTGTGAATCACAACCAGAGATTGCTAAGGTTCTTGAGTTTTTCCATTTTGCTTGCA 654
Query 661 CGTCTGAGGACATCAACAATCTTTCCCATGCTTTGATGCTTCAAGAAGCACTTAGTTCGG 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 655 CGTCTGAGGACATCAACAATCTTTCCCATGCTTTGATGCTTCAAGAAGCACTTAGTTCGG 714
Query 721 TTATACTTCCTA-CCATGGATGAGCTGATCAAGTCAATCTCTCTGATAGCTAAGAACTTT 779
|||||||||| | ||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 715 TTATACTTCC-ATCCATGGATGAGCTGATCAAGTCAATTTCTCTGATGGCTAAGAACTTT 773
Query 780 GCTTATGTCCCCATGCTTTCACGAACTCATGGGCAGCCAGCTACGCCAACAACTTTGGGG 839
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 774 GCATATGTCCCCATGCTTTCACGAACTCATGGGCAGCCAGCTACGCCAACAACTTTAGGA 833
Query 840 AAAGAAATGGCGAATTTTGCTGTGAGGTTAAGCGAAGAAAGGAGATATCTTTCAGAAACT 899
||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 834 AAAGAAATGGCGATTTTTGCTGTGAGGTTAAGTGAAGAAAGGAGATATCTTTCAGAAACT 893
Query 900 AAGATTAAGGGGAAATTTGCAGGTGCTGTTGGGAACTACAACGCCCATATTTCCGCATAT 959
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 894 AAGATTAAGGGGAAATTTGCGGGTGCTGTTGGGAACTACAACGCCCATATTTCCGCATAT 953
Query 960 TCGAATATTGACTGGCCTCATGTTTCCGAGGAGTTTGTTACTTCTCTTGGATTAACATTC 1019
|||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||
Sbjct 954 TCGAATATTGACTGGCCTCATGTTGCAGAGGATTTTGTTACTTCTCTTGGATTAACATTC 1013
Query 1020 AACCCATACGTGACTCAGATTGAACCTCATGACTATATGGCTAGACTTTTTAATAATATC 1079
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1014 AACCCATACGTGACTCAGATTGAACCTCATGACTATATGGCTAGACTTTTTAATAATATT 1073
Query 1080 AGCCAGTTCAACACTATTTTAATTGATTTTGACAGAGATATATGGAGCTACATATCTC-T 1138
||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 1074 AGCCAATTCAACAATATTTTAATTGATTTTGACAGAGATATATGGAGCTACATATC-CAT 1132
Query 1139 AGGGTACTTTAAGCAG--A----CAACTAAAGCGGGTGAAATTGGATCGTCGACAATGCC 1192
||||||||||||||| | ||||||||||||||||||||||||| |||||||||||
Sbjct 1133 GGGGTACTTTAAGCAGGCAAGTACAACTAAAGCGGGTGAAATTGGATCATCGACAATGCC 1192
Query 1193 TCACAAAGTGAATCCTATTGACTTTGAGAACAGCGAAGGGAATCTAGGGAAAGCAAACGC 1252
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 1193 TCACAAAGTGAATCCTATTGACTTTGAGAACAGCGAAGGGAACCTAGGGAAAGCTAACGC 1252
Query 1253 AGAGCTTACTTTTCTCAGCATGAAGCTTCCCATTTCACGCATGCAGCGTGATTTAACTGA 1312
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 1253 AGAGCTTACTTTTCTCAGCATGAAGCTTCCCATTTCACGGATGCAGCGTGATTTAACCGA 1312
Query 1313 TTCAACTGTCTTGAGAAACATGGGTGGAGCTTTAGGACACTCTCTTCTCGCTTACAAGAG 1372
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1313 TTCAACTGTCTTGAGAAACATGGGTGGAGCTTTAGGACACTCTCTTCTGGCTTACAAGAG 1372
Query 1373 TGCGATACAGGGAATCGGGAAGCTTCAGGTTAATGAAGCTCGGTTAAAAGAAGATTTGGA 1432
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1373 CGCGATACAGGGAATCGGGAAGCTTCAGGTTAATGAAGCTCGTTTAAAAGAAGATTTGGA 1432
Query 1433 TGATAATTGGGAAGTCCTTGCTGAACCAATACAAACTGTGATGAGGAGATACGGTGTCCC 1492
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1433 TGATAATTGGGAAGTCCTTGCTGAACCGATACAAACTGTGATGAGGAGATACGGTGTCCC 1492
Query 1493 TGAGCCGTATGAGAAGCTGAAGGAGCTAACAAGAGGAAAAGCTGTGAATGAAGAAACCAT 1552
|||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1493 TGAGGCGTATGAAAAGCTGAAGGAGCTAACAAGAGGAAAAGCTGTGAATGAAGAAAGCAT 1552
Query 1553 AAGAACGTTTATCAAAGGTTTGGAATTGCCTTCAGAAGCAAAAGACCAACTTCTGGAGCT 1612
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||
Sbjct 1553 AAGAACGTTTATCAAAGGTTTGGAATTGCCTGCAGAAGCAAAAGACCAACTTTTGGAACT 1612
Query 1613 AACTCCACACACATATGTTGGTGCTGCTGCTGCATTGGCACTGGCCGTGGATGAAGCTCT 1672
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 1613 AACTCCACACACATATGTTGGTGCTGCTGCTGCATTGGCACTAGCCGTGGATGAAGCTGT 1672
Query 1673 GCACTTGGGACATTGATGATGATCAAAGTGGTGATAGATTGTCCTCTTTTATTATGGTAT 1732
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1673 GCACTTGGGACATTGATGATGATCAAAGTGGTGATAGATTGTCCTCTTGTATTATGGTAC 1732
Query 1733 TCTTTTCGAAATTGGTGGAAAACAGAGACAATTTATAG---G-TCGGTGACTTGCAAGTC 1788
||||||| |||| |||||||||||| ||||||||| | ||| ||||||| | |||
Sbjct 1733 TCTTTTCCAAATCAATGGAAAACAGAGTCAATTTATATATAGATCGATGACTTGGACGTC 1792
Query 1789 GTCGTTTAAAATGTT 1803
|||||||||||||||
Sbjct 1793 GTCGTTTAAAATGTT 1807
> Ahg930346 jgi|Araly1|930346|scaffold_302803.1
Length=1697
Score = 2176 bits (1178), Expect = 0.0
Identities = 1475/1615 (91%), Gaps = 33/1615 (2%)
Strand=Plus/Plus
Query 136 TTACACCCACCGGAA-TATTCCTAAACCCATCAAAATCAGTGTGTTTGGCTTCACATCAT 194
||| ||||||| ||| | ||| |||||||||||||||| | || | | | ||||||
Sbjct 76 TTATACCCACCAGAAGT-TTCTTAAACCCATCAAAATC--TCTG--T-G---C-CATCAT 125
Query 195 CGGCTTCCGAGAGTTTCATGCTCTGTTTCTACTACTACTG-ATTCTCCCAAGCTAGTGAC 253
| |||||| |||||||||| |||||||||| | || | | |||||| ||||||| ||||
Sbjct 126 CAGCTTCCAAGAGTTTCATTCTCTGTTTCT--T-CT-CCGTATTCTCTCAAGCTAATGAC 181
Query 254 TTCAACAAAGGTGACGGCAATGGATGGAGTGAGCTCTAGAGACTTGGAGATGTCGAATTT 313
||||| |||||| | ||||||| ||| | || || |||||||||||||||||||||||
Sbjct 182 TTCAAGAAAGGTTATAGCAATGGCTGGTGCAAGTTCCAGAGACTTGGAGATGTCGAATTT 241
Query 314 AACGGCGTTATCGCCTTTGGATGGACGTTATTGGAGTAAAGTTAAGGACTTGGCTTCTTC 373
||| || ||||||||||||||||||||||| ||| | ||||||||||| |||||||||||
Sbjct 242 AACAGCATTATCGCCTTTGGATGGACGTTACTGGGGGAAAGTTAAGGAATTGGCTTCTTC 301
Query 374 TTTGAGCGAGTTTGGATTGATCTATTTCCGAGTTTTTGTCGAGATCAAATGGCTTCTTAA 433
| |||| |||||||| |||||||||||||| || |||||||||||||||||||||||||
Sbjct 302 TATGAGTGAGTTTGGGTTGATCTATTTCCGTGTACTTGTCGAGATCAAATGGCTTCTTAA 361
Query 434 GCTTTCGAATATTCCTGAAGTCACTGAAGTTCCAAGCTTTAGCAAAGAAGCTCAGAGTTT 493
|||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct 362 GCTTTCAAATATTCCTCAAGTCACTGAAGTTCCAAGCTTTAGCAAAGAAGCTCAGA-TTT 420
Query 494 -CTTGCAAGGCATAATCGATGGATTTAGCATAGACGATGCATTGGAAATTAAGAAGATTG 552
|||||||||||||||||||||||||||||| || |||||||||||| |||||||||| |
Sbjct 421 ACTTGCAAGGCATAATCGATGGATTTAGCATGGATGATGCATTGGAAGTTAAGAAGATCG 480
Query 553 AGAGAGTAACAAATCATGATGTGAAAGCAGTGGAGTATTTCTTGAAACAAAAGTGTGAAT 612
||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 481 AGAAAGTAACAAATCACGATGTGAAAGCAGTGGAGTATTTCTTGAAACAAAAATGTGAAT 540
Query 613 CACAACCAGAGATTGCTAAGGTTCTTGAGTTTTTCCATTTCGCTTGCACGTCTGAGGACA 672
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 541 CACATCCAGAGATTGCTAAGGTTCTTGAGTTTTTCCATTTCGCTTGCACGTCGGAGGACA 600
Query 673 TCAACAATCTTTCCCATGCTTTGATGCTTCAAGAAGCACTTAGTTCGGTTATACTTCCTA 732
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 601 TCAACAATCTTTCCCATGCTTTGATGCTTCAAGAAGCACTTAGTTCGGTTATACTTCC-A 659
Query 733 -CCATGGATGAGCTGATCAAGTCAATCTCTCTGATAGCTAAGAACTTTGCTTATGTCCCC 791
|||||||||||||||||||||| |||||||||| ||||||| |||||| |||||||||
Sbjct 660 GCCATGGATGAGCTGATCAAGTCTCTCTCTCTGATGGCTAAGAGCTTTGCATATGTCCCC 719
Query 792 ATGCTTTCACGAACTCATGGGCAGCCAGCTACGCCAACAACTTTGGGGAAAGAAATGGCG 851
||||||||||||||||| || ||||||||| | || ||||||||||||||||||||||||
Sbjct 720 ATGCTTTCACGAACTCACGGACAGCCAGCTTCACCTACAACTTTGGGGAAAGAAATGGCG 779
Query 852 AATTTTGCTGTGAGGTTAAGCGAAGAAAGGAGATATCTTTCAGAAACTAAGATTAAGGGG 911
| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct 780 ATTTTTGCTGTGAGGTTAAGCGAAGAAAAGAGATATCTTTCAGAAACCAAGATTAAGGGG 839
Query 912 AAATTTGCAGGTGCTGTTGGGAACTACAACGCCCATATTTCCGCATATTCGAATATTGAC 971
|||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| |||
Sbjct 840 AAATTTGCGGGTGCTGTTGGGAACTACAACGCCCATATTTCTGCATATTCTAATATCGAC 899
Query 972 TGGCCTCATGTTTCCGAGGAGTTTGTTACTTCTCTTGGATTAACATTCAACCCATACGTG 1031
|||||||||||| | |||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 900 TGGCCTCATGTTGCAGAGGAGTTTGTTACATCTCTTGGATTAACATTTAACCCATACGTG 959
Query 1032 ACTCAGATTGAACCTCATGACTATATGGCTAGACTTTTTAATA-ATATCAGCCAGTTCAA 1090
|||||||||||||| |||||||||||||||||||||||||||| | || ||||| |||||
Sbjct 960 ACTCAGATTGAACCCCATGACTATATGGCTAGACTTTTTAATACA-ATTAGCCAATTCAA 1018
Query 1091 CACTATTTTAATTGATTTTGACAGAGATATATGGAGCTACATATCTCTAGGGTACTTTAA 1150
|| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1019 CAATATCTTGATTGATTTTGACAGAGATATATGGAGCTACATATCTCTAGGGTACTTTAA 1078
Query 1151 GCAGACAACTAAAGCGGGTGAAATTGGATCGTCGACAATGCCTCACAAAGTGAATCCTAT 1210
||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 1079 GCAGATAACTAAAGCGGGTGAAATCGGATCATCGACAATGCCTCACAAAGTGAATCCTAT 1138
Query 1211 TGACTTTGAGAACAGCGAAGGGAATCTAGGGAAAGCAAACGCAGAGCTTACTTTTCTCAG 1270
||||||||||||||| |||||||||||||| |||||||| ||||||||| ||||||||||
Sbjct 1139 TGACTTTGAGAACAGTGAAGGGAATCTAGGTAAAGCAAATGCAGAGCTTGCTTTTCTCAG 1198
Query 1271 CATGAAGCTTCCCATTTCACGCATGCAGCGTGATTTAACTGATTCAACTGTCTTGAGAAA 1330
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 1199 CATGAAGCTTCCCATTTCACGAATGCAGCGTGATTTAACCGATTCAACTGTCTTGAGAAA 1258
Query 1331 CATGGGTGGAGCTTTAGGACACTCTCTTCTCGCTTACAAGAGTGCGATACAGGGAATCGG 1390
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||
Sbjct 1259 CATGGGTGGAGCTTTAGGACACTCTCTTCTGGCTTACAAGAGCGCGATACAGGGAATTGG 1318
Query 1391 GAAGCTTCAGGTTAATGAAGCTCGGTTAAAAGAAGATTTGGATGATAATTGGGAAGTCCT 1450
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 1319 GAAGCTTCAGGTTAATGAAGCTCGGTTAAAAGAAGATTTGGATCATACTTGGGAAGTCCT 1378
Query 1451 TGCTGAACCAATACAAACTGTGATGAGGAGATACGGTGTCCCTGAGCCGTATGAGAAGCT 1510
|||||||| ||||||||||||||||||||||| ||||| || |||||||||||||||||
Sbjct 1379 CGCTGAACCGATACAAACTGTGATGAGGAGATATGGTGTTCCAGAGCCGTATGAGAAGCT 1438
Query 1511 GAAGGAGCTAACAAGAGGAAAAGCTGTGAATGAAGAAACCATAAGAACGTTTATCAAAGG 1570
|||||||||||||||||||| ||||||||||||||||| ||| |||| |||||| | |||
Sbjct 1439 GAAGGAGCTAACAAGAGGAAGAGCTGTGAATGAAGAAAGCATTAGAAAGTTTATTACAGG 1498
Query 1571 TTTGGAATTGCCTTCAGAAGCAAAAGACCAACTTCTGGAGCTAACTCCACACACATATGT 1630
||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 1499 TTTGGAATTGCCTGAAGAAGCAAAAGACCAACTTTTGAAGCTAACTCCACACACATATGT 1558
Query 1631 TGGTGCTGCTGCTGCATTGGCACTGGCCGTGGATGAAGCTCTGCACTTGGGACATTGATG 1690
||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||
Sbjct 1559 TGGCGCTGCTGCTGCATTGGCACTAGCCGTGGATGAAGCTGTGCACTTGGGACATTAATA 1618
Query 1691 AT--GATCAAAGT-GGTGATAGAT--TG-TCCTCT-TT-TATTATGGTATTCTTT 1737
|| ||||||| | |||| ||||| || | || | || ||||||| | ||||||
Sbjct 1619 ATATGATCAAA-TCGGTG-TAGATGATGGTGCT-TGTTGTATTATGATTTTCTTT 1670
> Ahg320487 jgi|Araly1|320487|fgenesh1_pm.C_scaffold_4000544
Length=333
Score = 259 bits (140), Expect = 5e-68
Identities = 194/219 (89%), Gaps = 8/219 (4%)
Strand=Plus/Plus
Query 291 AGAGACTTGGAGATGTCGAATTTAACGGCGTTATCGCCTTTGGATGGACGTTATTGGAGT 350
||||| ||||||||||| |||||||| || |||||||||||||||||||||| ||||||
Sbjct 19 AGAGAGTTGGAGATGTCAAATTTAACAGCATTATCGCCTTTGGATGGACGTTTTTGGAGG 78
Query 351 AAAGTTAAGGACTTGGCTTCTTCTTTGAGCGAGTTT-GGATTGATCTATTTCCGAG-TTT 408
||| ||||||| |||||||||||| ||||||||||| || |||||||||||||||| |
Sbjct 79 AAATTTAAGGAATTGGCTTCTTCTATGAGCGAGTTTAGG-TTGATCTATTTCCGAGCACT 137
Query 409 TTGTCGAGATCAAATGGCTTCTTAAGCTTTCGAATATTC-CT-GAAGTCACTGAAGTTCC 466
| || |||||||||||||||| ||||||||| |||| | || ||||||||||||||||
Sbjct 138 TGGT-GAGATCAAATGGCTTCCTAAGCTTTCAAATACACTCTCAAAGTCACTGAAGTTCC 196
Query 467 AAGCTTTAGCAAAGAAGCTCAGAGTTT-CTTGCAAGGCA 504
||||||||||||||||||||||| ||| |||||||||||
Sbjct 197 AAGCTTTAGCAAAGAAGCTCAGA-TTTACTTGCAAGGCA 234
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72980909420
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5